View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8963_low_46 (Length: 240)
Name: NF8963_low_46
Description: NF8963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8963_low_46 |
 | |
|
| [»] chr3 (27 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
| |
|
| [»] chr4 (2 HSPs) |
| |
|
| [»] chr6 (1 HSPs) |
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| [»] scaffold0271 (1 HSPs) |
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| [»] scaffold0648 (1 HSPs) |
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| [»] scaffold0274 (1 HSPs) |
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| [»] scaffold0640 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19352532 - 19352771
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19352532 |
taataagttttttggtgaaattccgcagaccatggctcgcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
19352631 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19352632 |
ggaacacaacttcaaagttttaatgcatcaagttacattgggaatcctagactatgtggagctcctcttaataattgtaccatgaaagaagaaaatccta |
19352731 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
19352732 |
agactgcaacgccatcaacagagaatgaaggtgatgactc |
19352771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 17943094 - 17943333
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| |||||| |||| ||||| | ||| || |||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
17943094 |
taataagttttttggtgaaattcctcagagcatggctctcttaaattttttgggggtgttgaatttatcttgcaataattttgatggaaaaatcccaatt |
17943193 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
17943194 |
ggaactcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgtggagctcctcttaataattgtaccacgaaagaagaaaatccta |
17943293 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| ||||||| ||| || |||||||| |||| ||||||||| |
|
|
| T |
17943294 |
aaactgcaaagccgtccacagagaatgaagatgatgactc |
17943333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 19382033 - 19382269
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
|||||||||||||||||||||||| || | ||| |||||| |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19382033 |
taataagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaaca |
19382132 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
19382133 |
ggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcggagctcctcttaataattgtaccataacagaagaaaatccta |
19382232 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatga |
237 |
Q |
| |
|
| |||||| |||||| |||||||| |||| |||||| |
|
|
| T |
19382233 |
aaactgcactgccatctacagagaatgaagatgatga |
19382269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19425830 - 19426069
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| || || ||| |||||| | |||| |||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
19425830 |
taataagttttgtggtgaaattcctcagagcatgtctgtcttaacctttttgggttttttgaatttatcttgcaataatttaaacggaaaaatcccaact |
19425929 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
19425930 |
ggaacacaacttcaaagaattaatgcatcgagttacattgggaatcctaaactatgcggagctcctctcaataattgtaccatgaaagaagaaaatccta |
19426029 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| |||||||| ||||| ||| |||| |||| ||||||||| |
|
|
| T |
19426030 |
aaactgcaacaccatctacaaagaatgaagatgatgactc |
19426069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 19465493 - 19465716
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| |||||| |||||||||| ||||| || |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
19465493 |
taataagttttttggtgaaattcctcagagcatggctctc-taaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaattccaata |
19465591 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||| ||| ||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
19465592 |
ggaactcaacttcaaagttttaatgtatcaagttatattgggaatcctaaactatgcggagctcctcttaataattgtaccataacagaagaaaatccta |
19465691 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaa |
225 |
Q |
| |
|
| |||||| |||||| |||||||| |
|
|
| T |
19465692 |
aaactgcactgccatctacagagaa |
19465716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18017162 - 18017386
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| |||||| |||||||||| | ||| || |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
18017162 |
taataagttttttggtgaaattcctcagagcatggctctcttaaactttttgggggtgttgaatttatcttgcaataattttgatggaaaaatcccaaca |
18017261 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| |||||||||||| | ||||||| ||||| ||||||||||||| ||| || || |||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
18017262 |
ggaactcaacttcaaagtcgtgatgcatcaagttatattgggaatcctaaactgtgcggggctcctcttaataattgtaccataacagaagaaaatccta |
18017361 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaa |
225 |
Q |
| |
|
| ||||||| |||||| |||||||| |
|
|
| T |
18017362 |
aaactgcaatgccatctacagagaa |
18017386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19335152 - 19335391
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| | || ||| || || ||| |||||| | ||| |||||||||| ||| | ||| | ||||||||||||||| |
|
|
| T |
19335152 |
taataagttttatggtgaaattcctcggagcatgtctgtcttaacctttttgggttatttgaatttatcttacaacagttttgaaggaaaaatcccaact |
19335251 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
19335252 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctaaactgtgcggagctcctctcaataattgtaccatgaaagaagaaaatccta |
19335351 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| ||||||| |||||||||||| || |||| ||| ||||| |
|
|
| T |
19335352 |
aaactgcaatgccatcaacagataatgaagatgacgactc |
19335391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19394289 - 19394528
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| || | ||| |||||| |||||||||| | ||| ||| |||||| ||| ||||| | ||||||||||||| |
|
|
| T |
19394289 |
taataagttttatggtgaaattcctcaaagcatggctctcttaaactttttgggttatttgaatctatcttacaacaattttgacggaaaaatcccaata |
19394388 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||| |
|
|
| T |
19394389 |
ggaactcaacttcaaagttttaatgcatcgagttatattgggaatcctaaactatgtggagctccacttagtaattgtaccgcagaagaagaaaatccta |
19394488 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| ||||||| |||||| |||||||| |||| ||| ||||| |
|
|
| T |
19394489 |
aaactgcaaagccatctacagagaatgaagatgaagactc |
19394528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18166296 - 18166535
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| ||||| ||| |||||||| ||| |||||||||| |||||| || | |||| |||||||| |
|
|
| T |
18166296 |
taataagttttatggtgaaattcctcagagcatctctctcttaacctttttaggttatttgaatttatcttacaataactttgacggaataatcccaata |
18166395 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| |||| |||||||| |||||||||| ||||||||| ||||||||||| |||||| |||| ||| |
|
|
| T |
18166396 |
ggaactcaacttcaaagttttaatgcatcaagttatattgagaatcctaaactatgtggagctcctcttagtaattgtaccacaaaagaaaaaaattcta |
18166495 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| ||||||||||| || ||| |||| |||| ||||||||| |
|
|
| T |
18166496 |
aaactgcaacgccgtctacaaagaatgaagatgatgactc |
18166535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19354855 - 19355070
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||| ||||| |||| ||| ||||| ||| |||||||| ||| |||||||||| ||| ||||| | ||||||||||||| |
|
|
| T |
19354855 |
taataagttttatggtgacattcctcagagcatgtctctcttaacctttttaggttatttgaatttatcttacaacaattttgacggaaaaatcccaata |
19354954 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||| |||| ||||||| |||||| ||| ||||||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
19354955 |
ggaactcaacttcaaagttttaatgcatcaagttacgttggaaatcctaaactatgcggagctcctctcaataattgtaccaagaaagaagaaaatccta |
19355054 |
T |
|
| Q |
201 |
agactgcaacgccatc |
216 |
Q |
| |
|
| ||||||| |||||| |
|
|
| T |
19355055 |
aaactgcaatgccatc |
19355070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19415324 - 19415553
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||| | ||||||||||| |||| ||| || || ||| |||||| || |||||||||||||| ||| | ||| | ||||||||||||| |
|
|
| T |
19415324 |
taataagttctacggtgaaattcctcagagcatgtctttcttaacctttttggattatttaaatttatcttacaacagttttgacggaaaaatcccaata |
19415423 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||| ||||| ||||||| |||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
19415424 |
ggaactcaacttcaaagttttaacgcatcaagttacaacgggaatcctaaactatgcggagctcctcttaataattgtaccatcaaagaagaaaatccta |
19415523 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaag |
230 |
Q |
| |
|
|||||||||||||||||| |||| |||| |
|
|
| T |
19415524 |
caactgcaacgccatcaacaaagaatgaag |
19415553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 19376762 - 19376942
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| || || ||| |||||| | ||| ||| |||||| ||| ||||| |||||||||| |||| |
|
|
| T |
19376762 |
taataagttttatggtgaaattcctcagaccatgtctatcttaacctttttgggttatttgaatctatcttacaacaattttgatggaaaaattccaata |
19376861 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtacc |
181 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
19376862 |
ggaactcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgcggagctcctcttaataattgtacc |
19376942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18872738 - 18872509
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| |||| || ||||| | | ||| |||||||||| ||| | ||| | |||||||| |||| | |
|
|
| T |
18872738 |
taataagttttgtggtgaaattcctcagagcatgtctctgttacactttatgggttatttgaatttatcttacaacagttttgaaggaaaaattccaatt |
18872639 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||| ||||||||||||| ||||||||||| |||| |
|
|
| T |
18872638 |
ggaactcaacttcaaagttttaatgcatcgagttgcattgggaatcctaaactatgcggagatcctctcaataattgtaccacaaaagaagaaaatccta |
18872539 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaag |
230 |
Q |
| |
|
| ||||||| |||||| ||| |||| |||| |
|
|
| T |
18872538 |
aaactgcaaagccatctacaaagaatgaag |
18872509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 19456438 - 19456675
Alignment:
| Q |
2 |
aataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaactg |
101 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||| ||||| ||| |||||| | ||| |||||||| | ||||||||| | |||||||||| | | |
|
|
| T |
19456438 |
aataagttttgtggtgaaattccacagagcatgtctctcttaacctttttgggttatttgaatttatcatacaataattttgacagaaaaatcccgatag |
19456537 |
T |
|
| Q |
102 |
gaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaacctaa |
201 |
Q |
| |
|
||| ||||||||||||||||| |||||||| |||||||| ||||| | | |||| ||| ||||||||||||||||||||| | |||||||||| ||||| |
|
|
| T |
19456538 |
caacgcaacttcaaagttttaacgcatcgagctacattggaaatccaaaattatgcggagctcctcttaataattgtaccaaggaagaagaaaatcctaa |
19456637 |
T |
|
| Q |
202 |
gactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
||||||||| ||||| ||||||| |||| ||||||||| |
|
|
| T |
19456638 |
gactgcaac-ccatccacagagattgaagatgatgactc |
19456675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 18109655 - 18109776
Alignment:
| Q |
74 |
aataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaata |
173 |
Q |
| |
|
|||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||| | | ||||||||||||||||||||| |
|
|
| T |
18109655 |
aataattttgatggaaaaatcccagtcggtacacaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgtggatctcctcttaata |
18109754 |
T |
|
| Q |
174 |
attgtaccatgaaagaagaaaa |
195 |
Q |
| |
|
||||||||| | |||||||||| |
|
|
| T |
18109755 |
attgtaccacggaagaagaaaa |
18109776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 17726336 - 17726197
Alignment:
| Q |
62 |
aatttatcttgcaataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggat |
161 |
Q |
| |
|
|||||||||| ||| || || ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |
|
|
| T |
17726336 |
aatttatcttacaacaagtttgatggaaaaatcccaataggaactcaacttcaaagttttaatgcatcgagttatattgggaatcattatctatgcggag |
17726237 |
T |
|
| Q |
162 |
ctcctcttaataattgtaccatgaaagaagaaaaacctaa |
201 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
17726236 |
ctcctcttaataattgtaccatagaagaagaaaatcctaa |
17726197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 18147974 - 18148164
Alignment:
| Q |
5 |
aagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggt-tttaaatttatcttgcaataatttcaatggaaaaatcccaactgga |
103 |
Q |
| |
|
|||||||||||||||||||| ||| ||| ||||| ||| |||||| ||| | ||| |||||||| | |||||||| | |||| |||||| | ||| |
|
|
| T |
18147974 |
aagttttttggtgaaattcctcagggcatgtctctcttaaccttttt-gagttatttgaatttatcatataataattttgacggaagaatcccgatcgga |
18148072 |
T |
|
| Q |
104 |
acacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaa |
195 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||| |||| |||||||||||||||| | |||||||||| |
|
|
| T |
18148073 |
acacaacttcaaagttttaatgcatcgagctacattggcaatcctaaactatgcggagctccccttaataattgtaccacggaagaagaaaa |
18148164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 19027565 - 19027426
Alignment:
| Q |
62 |
aatttatcttgcaataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggat |
161 |
Q |
| |
|
|||||||||| ||| || || ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |
|
|
| T |
19027565 |
aatttatcttacaacaagtttgatggaaaaatcccaataggaactcaacttcaaagttttaatgcatcgagttatattgggaatcattatctatgcggag |
19027466 |
T |
|
| Q |
162 |
ctcctcttaataattgtaccatgaaagaagaaaaacctaa |
201 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
19027465 |
ctcctcttaataattgtaccatagaagaagaaaatcctaa |
19027426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 19400869 - 19401047
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||| |||||||||||||||||||| | |||| |||||||| |
|
|
| T |
19400869 |
taataagttttttggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaataattttgacggaacaatcccaata |
19400968 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgta |
179 |
Q |
| |
|
||| | ||| |||||| |||| || |||| || | |||||| ||||| | |||| ||| |||||||||| ||||||| |
|
|
| T |
19400969 |
ggatctcaaattcaaacttttgatccatcaagcttcattggaaatccaaagttatgcggagctcctcttaaaaattgta |
19401047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 18104733 - 18104842
Alignment:
| Q |
86 |
ggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatga |
185 |
Q |
| |
|
|||| |||||| || ||||||||||||||||||||||||||||| || |||||||| ||||||| |||||| ||| ||||||||||||| ||||||| || |
|
|
| T |
18104733 |
ggaagaatcccgaccggaacacaacttcaaagttttaatgcatcaagctacattggcaatcctaaactatgcggagctcctcttaataactgtaccagga |
18104832 |
T |
|
| Q |
186 |
aagaagaaaa |
195 |
Q |
| |
|
|||||||||| |
|
|
| T |
18104833 |
aagaagaaaa |
18104842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 19438102 - 19438298
Alignment:
| Q |
5 |
aagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaactggaa |
104 |
Q |
| |
|
|||||||||||||||||||| || ||| ||||| ||| |||||| || ||| |||||||| | |||||||| | |||| |||||| | |||| |
|
|
| T |
19438102 |
aagttttttggtgaaattcctcaaggcatgtctctcttaacctttttggattatttgaatttatcatataataattttgacggaagaatcccgatcggaa |
19438201 |
T |
|
| Q |
105 |
cacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaacctaa |
201 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||| ||||||| | |||||||| |||||||||||||||||||| | |||||||||| ||||| |
|
|
| T |
19438202 |
cgcaacttcaaagttttaatgcatcgagctacattggcaatcctaaattatgtggagttcctcttaataattgtaccacggaagaagaaaatcctaa |
19438298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 17951048 - 17951175
Alignment:
| Q |
74 |
aataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaata |
173 |
Q |
| |
|
|||||||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| || | ||||||||||||||||||||| |
|
|
| T |
17951048 |
aataattttgatggaaaaatcccggtcggtacacaacttcaaagttttaatgcatcgagctacattggcaatcttaaattatgtggatctcctcttaata |
17951147 |
T |
|
| Q |
174 |
attgtaccatgaaagaagaaaaacctaa |
201 |
Q |
| |
|
||||| ||| | |||||||||| ||||| |
|
|
| T |
17951148 |
attgttccacggaagaagaaaatcctaa |
17951175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 14895250 - 14895045
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||| ||||| ||| ||||| | ||| |||||||||| ||| ||||| | |||||||| ||||| |
|
|
| T |
14895250 |
taataagttttatggtgaaattccgcagagcatgtctctcttaacatttttgggttatttgaatttatcttacaacaattttgacggaaaaattccaaca |
14895151 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| |||||||| ||||||| |||||| ||| ||||| | | |||||||||| |||||||||| |||| |
|
|
| T |
14895150 |
ggaactcaacttcaaagttttaatgaatcgagctacattggaaatcctaaactatgcggagctcctgtaaccaattgtaccacagaagaagaaaatccta |
14895051 |
T |
|
| Q |
201 |
agactg |
206 |
Q |
| |
|
| |||| |
|
|
| T |
14895050 |
acactg |
14895045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 25464251 - 25464399
Alignment:
| Q |
62 |
aatttatcttgcaataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggat |
161 |
Q |
| |
|
|||||||||| ||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| | | |||| ||| |
|
|
| T |
25464251 |
aatttatcttacaacaattttgatggaaaaatcccaataggaactcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcggac |
25464350 |
T |
|
| Q |
162 |
ctcctcttaataattgtaccatgaaagaagaaaaacctaagactgcaac |
210 |
Q |
| |
|
||||||||| | ||||||| ||||||||||| ||||| | |||||| |
|
|
| T |
25464351 |
ttcctcttaaagagtgtaccacaaaagaagaaaatcctaaaaatgcaac |
25464399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 18117108 - 18117302
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggt-tttaaatttatcttgcaataatttcaatggaaaaatcccaac |
99 |
Q |
| |
|
||||||| ||| |||||||||||| |||| ||| ||||| ||| |||||| | | | ||| |||||||| | ||||||||| | ||||||||||||| |
|
|
| T |
18117108 |
taataagctttgtggtgaaattcctcagagcatgtctctcttaa-cttttttgggttatttgaatttatcatacaataattttgacggaaaaatcccaat |
18117206 |
T |
|
| Q |
100 |
tggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaa |
195 |
Q |
| |
|
| ||| ||||||||||||||||||||||| || |||||||| ||||| | | |||| || ||||||||||||| ||||||| | |||||||||| |
|
|
| T |
18117207 |
agcaacgcaacttcaaagttttaatgcatcaagctacattggcaatccaaaattatgcggcgctcctcttaataactgtaccacggaagaagaaaa |
18117302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 195
Target Start/End: Original strand, 19462393 - 19462526
Alignment:
| Q |
62 |
aatttatcttgcaataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggat |
161 |
Q |
| |
|
|||||||| | ||||||||| | ||||||||||||| | ||| ||||||||||||||||||||||| || |||||||| ||||| | | |||| || |
|
|
| T |
19462393 |
aatttatcatacaataattttgacggaaaaatcccaatagcaacgcaacttcaaagttttaatgcatcaagctacattggcaatccaaaattatgcggtg |
19462492 |
T |
|
| Q |
162 |
ctcctcttaataattgtaccatgaaagaagaaaa |
195 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| |
|
|
| T |
19462493 |
ctcctcttaataactgtaccacggaagaagaaaa |
19462526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16678350 - 16678531
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||||| |||||||||| | ||| ||||| |||||||| ||||| | ||||||||||| | |
|
|
| T |
16678350 |
taataagttttctggtgaaattcctcagagtgcgtctctcttaaactttttgggttatttgaatttgtcttgcaacaattttgacggaaaaatcccgata |
16678449 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtacca |
182 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||| ||||| | | |||| ||| ||||||| || || ||||||| |
|
|
| T |
16678450 |
ggaactcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcggagctcctctcaaaaactgtacca |
16678531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 8460706 - 8460945
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||| | |
|
|
| T |
8460706 |
taataagttttgtggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaataattttgacggaaaaatcccaatt |
8460805 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||| ||||||| ||| || ||| ||||||||| || |||||||| |||||||||||| |||| |
|
|
| T |
8460806 |
ggaactcaacttcaaagttttaatgcatcgagctacattggaaatcctaaactgtgcggagctcctcttagtagttgtaccacgaaagaagaaaatccta |
8460905 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| ||||||| ||| || |||||||| |||| ||||||||| |
|
|
| T |
8460906 |
aaactgcaatgccgtctacagagaatgaagatgatgactc |
8460945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 62 - 240
Target Start/End: Original strand, 15536734 - 15536912
Alignment:
| Q |
62 |
aatttatcttgcaataatttcaatggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggat |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |
|
|
| T |
15536734 |
aatttatcttgcaataatttcaatggaaaaatcccaattggaacacaacttcaaagttttaatgcatcgagttacattgagaatcctaaactgtgtggag |
15536833 |
T |
|
| Q |
162 |
ctcctcttaataattgtaccatgaaagaagaaaaacctaagactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||| || || || ||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
15536834 |
ctcctctcaataattgtaccaagaaagaagaaaatcccaaaaccgcaacaccatccacagagaatgaagatgatgactc |
15536912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 2709432 - 2709290
Alignment:
| Q |
2 |
aataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaactg |
101 |
Q |
| |
|
||||| ||||||||||||||||| |||| ||| ||| || ||| || ||||||||||||||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
2709432 |
aataaattttttggtgaaattcctcagagcatggctatcataacctatttagaggttttaaatttatcttgcaataattttaatggaaaaatcccaatag |
2709333 |
T |
|
| Q |
102 |
gaacacaacttcaaagttttaatgcatcgagttacattgggaa |
144 |
Q |
| |
|
| || |||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
2709332 |
ggactcaacttcagagttttaatgcttcgagctacattgggaa |
2709290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 240
Target Start/End: Complemental strand, 13665723 - 13665569
Alignment:
| Q |
86 |
ggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatga |
185 |
Q |
| |
|
||||||||||| | ||||| ||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||| |
|
|
| T |
13665723 |
ggaaaaatccctataggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactttgtggagctcctcttaataattgtaccatga |
13665624 |
T |
|
| Q |
186 |
aagaagaaaaacctaagactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
|||||||||| |||| |||||||| ||||| ||| |||| |||| ||| ||||| |
|
|
| T |
13665623 |
aagaagaaaatcctagaactgcaacaccatctacaaagaatgaagatgacgactc |
13665569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11641 - 11880
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| ||| | ||||||| || | ||| || ||||||||||| ||||| || |||| || |||| |
|
|
| T |
11641 |
taataagttttgtggtgaaattcctcagagcatgtctcacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
11740 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
|| || |||||||||||||||||||||||||| || |||| ||||| | |||| || |||||||||| | ||||||| ||||||||||| |||| |
|
|
| T |
11741 |
gggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcagaactcctcttaaaagctgtaccacaaaagaagaaaatccta |
11840 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
| ||||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
11841 |
aaactgcaaagccatatacagagaatgaagatgatgactc |
11880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 2961 - 2721
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| | || ||| ||| | |||||||||| | ||| || ||||||||||| ||||| || |||| || |||| | |
|
|
| T |
2961 |
taataagttttgtggtgaaattcctcggagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaattttaacggaactataccaaat |
2862 |
T |
|
| Q |
101 |
gga-acacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaacct |
199 |
Q |
| |
|
|| || |||||||||||||||||||||||||| || |||| ||||| | |||| ||| |||||||||| || | ||||| |||||||||| ||| |
|
|
| T |
2861 |
ggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactataccacagaagaagaaaatcct |
2762 |
T |
|
| Q |
200 |
aagactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
|| ||||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
2761 |
aaaactgcaaagccatatacagagaatgaagatgatgactc |
2721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21725 - 21965
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| | || ||| ||| | |||||||||| | ||| || ||||||||||| ||||| || |||| || |||| | |
|
|
| T |
21725 |
taataagttttgtggtgaaattcctcggagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaattttaacggaactataccaaat |
21824 |
T |
|
| Q |
101 |
gga-acacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaacct |
199 |
Q |
| |
|
|| || |||||||||||||||||||||||||| || |||| ||||| | |||| ||| |||||||||| || | ||||| |||||||||| ||| |
|
|
| T |
21825 |
ggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactataccacagaagaagaaaatcct |
21924 |
T |
|
| Q |
200 |
aagactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
|| ||||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
21925 |
aaaactgcaaagccatatacagagaatgaagatgatgactc |
21965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6546 - 6782
Alignment:
| Q |
1 |
taataagttttttggtgaaattccgcagaccatagctctcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaact |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||| ||| | ||||||| || | ||| || ||||||||||| ||||| || |||| || |||| |
|
|
| T |
6546 |
taataagttttgtggtgaaattcctcagagcatgtctcacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatg |
6645 |
T |
|
| Q |
101 |
ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctagactatgtggatctcctcttaataattgtaccatgaaagaagaaaaaccta |
200 |
Q |
| |
|
|| || |||||||||||||||||||||||||| || |||| ||||| | |||| ||| |||||||||| || |||||| | ||||||||| |||| |
|
|
| T |
6646 |
gggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactgtacc---acagaagaaaatccta |
6742 |
T |
|
| Q |
201 |
agactgcaacgccatcaacagagaacgaaggtgatgactc |
240 |
Q |
| |
|
||||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
6743 |
taactgcaaagccatatacagagaatgaagatgatgactc |
6782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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