View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8966_high_7 (Length: 442)
Name: NF8966_high_7
Description: NF8966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8966_high_7 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 294; Significance: 1e-165; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 16 - 413
Target Start/End: Original strand, 13861306 - 13861703
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgt |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13861306 |
cattcattgagtcaatccaagttcaacttttccaattctctttctatccttgatctctctgtgaacaactttgtgtcatccatgatattcccgttgttgt |
13861405 |
T |
|
| Q |
116 |
caaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaacgtccatcaaatgactatggtatagtgatgaattctcttgagag |
215 |
Q |
| |
|
||||||| |||||||| || |||| |||||||||||||| ||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
13861406 |
caaacataagttccaatcttgttgagcttgacctttctttcaaccacttggaggctcctccatcaattgactatggcatagtgatgaattctcttgagag |
13861505 |
T |
|
| Q |
216 |
acttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactcaattta |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
13861506 |
acttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttaagttctttagatctgagtcgtcaaaacaattta |
13861605 |
T |
|
| Q |
316 |
acagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtgttagatatcagtaataatgaaatcactggaac |
413 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
13861606 |
acagaagaccttcaaataattcttcaaaatttgtctagtggttgtgttagaaactcactccaagtgttagatatcagttataatgaaatcgctggaac |
13861703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 73 - 425
Target Start/End: Complemental strand, 14086196 - 14085847
Alignment:
| Q |
73 |
tcttataacaacttcgtgtcatccatgatattcccgttgttgtcaaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaac |
172 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||| ||| |||||||||| |||||||| || || | |||||| |||| |||||||||||| |||| | |
|
|
| T |
14086196 |
tcttataacaacttcgcatcattcatgatattccaattggtgtcaaacataagttccaatcttgttaagcttgacatttcatttaaccacttgaaggatc |
14086097 |
T |
|
| Q |
173 |
gtccatcaaatgactatggtatagtgatgaattctcttgagagacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgt |
272 |
Q |
| |
|
||||||| |||||||||| ||||| ||||| ||||||||| ||||| |||||| ||||||||| | |||||||| ||||||||| | |||||||| |
|
|
| T |
14086096 |
ctccatcatatgactatggcatagttatgaagtctcttgaggaacttgacctatctaataatagattagaaggtggggtctttaaatcccttatgaatgt |
14085997 |
T |
|
| Q |
273 |
atgcaccttacgttctttagatctgagtggtcaactcaatttaacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactca |
372 |
Q |
| |
|
||||||| |||| |||||||| | | ||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
14085996 |
atgcaccctacgctctttagactt--gcaaacaa-acaatttcatagaagaccttcaaacaattcttcaaaatttgtctagtggttgtgtcagaaactca |
14085900 |
T |
|
| Q |
373 |
cttcaagtgttagatatcagtaataatgaaatcactggaacactacccgacct |
425 |
Q |
| |
|
|||||||||||||| ||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
14085899 |
cttcaagtgttagacctcagttataatggaatcactggaactttacccgacct |
14085847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 425
Target Start/End: Complemental strand, 14026780 - 14026374
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgt |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| |||| | |||||| ||||||||| | | ||| |
|
|
| T |
14026780 |
cattcattgagtcaatccaagttcaacttttccacttccctttctatccttgatctatctgataaccactttgcatcatccttgatattccattgggtgt |
14026681 |
T |
|
| Q |
116 |
caaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaacgtccatcaaatgactatggtatagtgatgaattctcttga-ga |
214 |
Q |
| |
|
||||||| |||||||| || | | |||||||||||| | |||| |||||||| | ||||||| ||| ||||| | ||||||||| || ||| | || |
|
|
| T |
14026680 |
caaacataagttccaatcttgtaaagcttgacctttctatgaaccttttggaggatcctccatcatatggttatggcacagtgatgaactcgcttcagga |
14026581 |
T |
|
| Q |
215 |
gacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactcaattt |
314 |
Q |
| |
|
|| ||| ||||||| |||| | ||||||||| || |||||| ||||||||||||||||||||||||||||| |||| | || || ||| |||||| |
|
|
| T |
14026580 |
ga-ttgacctatcatacaataaactgaagggtgtggcgtttaagtccttcatgaatgtatgcaccttacgttcattagttttgtatg--caa-acaattt |
14026485 |
T |
|
| Q |
315 |
aacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtgttagatatcagtaataatgaaatcactggaaca |
414 |
Q |
| |
|
| |||||| ||||||||| ||||||| |||||| || | |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| |
|
|
| T |
14026484 |
caaagaagaacttcaaacagttcttcacaatttgtctggaggttgtgttagaaactcacttcaagtgttagacctcagtgataacagaatcactggaaca |
14026385 |
T |
|
| Q |
415 |
ctacccgacct |
425 |
Q |
| |
|
||||| ||||| |
|
|
| T |
14026384 |
ctacctgacct |
14026374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 91 - 386
Target Start/End: Original strand, 13891558 - 13891850
Alignment:
| Q |
91 |
tcatccatgatattcccgttgttgtcaaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaacgtccatcaaatgactatg |
190 |
Q |
| |
|
|||| ||||||| ||| || |||||||||||| |||||||| || || |||||||||||||||| ||| |||||||| | |||||| |||| ||||| |
|
|
| T |
13891558 |
tcattcatgatactccagtcgttgtcaaacataagttccaatcttgttaaacttgacctttctttaaacttcttggaggctcctccatccaatgtctatg |
13891657 |
T |
|
| Q |
191 |
gtatagtgatgaattctcttgagagacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttcttt |
290 |
Q |
| |
|
| |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||| |
|
|
| T |
13891658 |
gcttagtgatgaagtctcttgaggtacttgacctgtcagaaaatagattgaagggtggggtgtttaaattcttcatgaatgtatgtaccatacaatcttt |
13891757 |
T |
|
| Q |
291 |
agatctgagtggtcaactcaatttaacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtgttaga |
386 |
Q |
| |
|
|| | ||| ||||| |||||||||||||||||||||| ||||| |||| |||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
13891758 |
aggtttga---gtcaaaacaatttaacagaagaccttcaatcaattattcacaatttgtctggtggatgtgttagaaactcacttcaagtgttaga |
13891850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 112 - 386
Target Start/End: Complemental strand, 13942554 - 13942283
Alignment:
| Q |
112 |
ttgtcaaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaacgtccatcaaatgactatggtatagtgatgaattctcttg |
211 |
Q |
| |
|
||||||||||| |||||||| || |||| |||||||||||| |||| |||||||| | ||||||| ||| ||||| | ||||||||| || ||| |
|
|
| T |
13942554 |
ttgtcaaacataagttccaatcttgttgagcttgacctttctcagaaccgtttggaggatcctccatcatatggttatggcacagtgatgaactcgcttc |
13942455 |
T |
|
| Q |
212 |
ag-agacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactca |
310 |
Q |
| |
|
|| ||| ||| ||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||| | ||| || |
|
|
| T |
13942454 |
aggaga-ttgacctatcatacaataaattgaagggtgtggcatttaaatccttcatgaatgtatgcaccttacgttctttaaatctgatt---caaaaca |
13942359 |
T |
|
| Q |
311 |
atttaacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtgttaga |
386 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13942358 |
atttcacagaagaccttcaaacaattcttcgcaatttgtctagcggttgtgttagaaactcacttcaagtgttaga |
13942283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 112 - 425
Target Start/End: Complemental strand, 14111966 - 14111656
Alignment:
| Q |
112 |
ttgtcaaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaacgtccatcaaatgactatggtatagtgatgaattctcttg |
211 |
Q |
| |
|
||||||||||| |||| || || |||| |||||||||||| | ||| ||||||||| | |||||||| ||||||||| ||||||||||| ||||| |
|
|
| T |
14111966 |
ttgtcaaacataagttataatcttgttgagcttgacctttctgtcaacaacttggaggctcctccatcaagtgactatggcatagtgatgaagcatcttg |
14111867 |
T |
|
| Q |
212 |
agagacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactcaa |
311 |
Q |
| |
|
||||||||| ||||| |||||||||| ||| |||||| |||||||||||| ||||| |||| ||||||||||||||||| | | |||| | | |
|
|
| T |
14111866 |
agagacttgatttatcaattaatagattgcaggatggggtctttaaatccttcgtgaatttatgtgccttacgttctttagatatta-aattcaa--cga |
14111770 |
T |
|
| Q |
312 |
tttaacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtgttagatatcagtaataatgaaatcactgga |
411 |
Q |
| |
|
| || |||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| | ||| |||| |||||||||| |
|
|
| T |
14111769 |
agtcactgaagaccttcaatcaattattcacaatttgtctagtggttgtgttagaaactcacttcaagtgttagaccttagtttcaatggaatcactgga |
14111670 |
T |
|
| Q |
412 |
acactacccgacct |
425 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
14111669 |
acactacctgacct |
14111656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 73 - 425
Target Start/End: Complemental strand, 14016609 - 14016260
Alignment:
| Q |
73 |
tcttataacaacttcgtgtcatccatgatattcccgttgttgtcaaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaac |
172 |
Q |
| |
|
||||||||||| ||| | |||| ||||||||| | || | |||||||||| |||||||| || |||| |||||||||||| |||| ||||||| | |
|
|
| T |
14016609 |
tcttataacaagttcatatcattcatgatatttcagtgggtgtcaaacatgagttccaatcttattgagcttgacctttctaacaaccttttggaggttc |
14016510 |
T |
|
| Q |
173 |
gtccatcaaatgactatggtatagtgatgaattctcttgagagacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgt |
272 |
Q |
| |
|
||||||| ||| ||||| ||||||||||| || ||| || ||||| ||||||| ||||| ||||||||| | || |||||||||||||||||| | |
|
|
| T |
14016509 |
ttccatcatatggttatggcatagtgatgaagtcccttcaggtacttgacctatcaaataataaattgaagggcgtggcatttaaatccttcatgaattt |
14016410 |
T |
|
| Q |
273 |
atgcaccttacgttctttagatctgagtggtcaactcaatttaacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactca |
372 |
Q |
| |
|
||| ||||||||||||||||| | || || |||||| ||||||||||||||| |||| |||| ||||| ||||| |||||||||||||||| |
|
|
| T |
14016409 |
atgtgccttacgttctttagat---attgaagaaaacaatttcacagaagaccttcaattaatttttcactatttgtctagtacttgtgttagaaactca |
14016313 |
T |
|
| Q |
373 |
cttcaagtgttagatatcagtaataatgaaatcactggaacactacccgacct |
425 |
Q |
| |
|
|||||||||||||| || || ||||| |||||||||||| |||||||||| |
|
|
| T |
14016312 |
cttcaagtgttagacctccgttctaatggaatcactggaactatacccgacct |
14016260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 115 - 378
Target Start/End: Original strand, 13873878 - 13874138
Alignment:
| Q |
115 |
tcaaacattagttccaacattcttgaacttgacctttcttttaaccacttggaggaacgtccatcaaatgactatggtatagtgatgaattctcttgaga |
214 |
Q |
| |
|
|||||||| |||||||| || || | ||||||||||| |||| ||||||||| ||||||| ||||||||| ||||| |||| ||||||||| |
|
|
| T |
13873878 |
tcaaacataagttccaatcttgttaagcttgacctttccaacaacctcttggaggattctccatcatatgactatgacatagttatgaggtctcttgagg |
13873977 |
T |
|
| Q |
215 |
gacttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactcaattt |
314 |
Q |
| |
|
||||| ||||||| ||||| |||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||| | | || |||||| |
|
|
| T |
13873978 |
aacttgacctatcacaaaatagtttgaagggtgggatgtttaaatccatcagaaatatatgcaccttacgttctttagatctgaat--ttaa-acaattt |
13874074 |
T |
|
| Q |
315 |
aacagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaa |
378 |
Q |
| |
|
|| ||| ||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13874075 |
cacccaaggccttcaatcaattattcatgatttgtctagtggttgtgttagaaactcacttcaa |
13874138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 217 - 412
Target Start/End: Complemental strand, 14048679 - 14048486
Alignment:
| Q |
217 |
cttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactcaatttaa |
316 |
Q |
| |
|
|||| ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| | | ||| ||||| |
|
|
| T |
14048679 |
cttgacctatcacataataaattgaagggtggggcatttaaatccttcatgaatttatgcgccttacgttctttagatattaaaaaaaaac--aatttcc |
14048582 |
T |
|
| Q |
317 |
cagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtgttagatatcagtaataatgaaatcactggaa |
412 |
Q |
| |
|
| ||||||||| || ||||| |||| |||||| |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
14048581 |
ctgaagacctttaatcaattattcacaatttgtctagtggttgtgttagaaactcgtttcaagtgttagatctcagttttaatgaaatcactggaa |
14048486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 13471323 - 13471457
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgt |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||| | || ||| |
|
|
| T |
13471323 |
cattccttgagtcaatccaagttcaaattttccacttctctttctatccttgatctctctcggaacaaatttgtgtcatcattgatatttcatatggtgt |
13471422 |
T |
|
| Q |
116 |
caaacattagttccaacattcttgaacttgacctt |
150 |
Q |
| |
|
||||||| |||||||| || |||| ||||||||| |
|
|
| T |
13471423 |
caaacataagttccaatcttgttgagcttgacctt |
13471457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 13942803 - 13942669
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgt |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||| ||||||||| | | ||| |
|
|
| T |
13942803 |
cattcattgagtcaatccaagttcaacttttcaacttctctttctatccttgatctctcttggaacaactttgcatcatccttgatattccaatgggtgt |
13942704 |
T |
|
| Q |
116 |
caaacattagttccaacattcttgaacttgacctt |
150 |
Q |
| |
|
||||||| ||||| || || |||| ||||||||| |
|
|
| T |
13942703 |
caaacataagttctaatcttgttgagcttgacctt |
13942669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 14016819 - 14016729
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcc |
106 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||| |
|
|
| T |
14016819 |
cattcattgagtcaatccaagttcaacttttccacttctctttctatccttgatctctccgataacaactttgcatcatccttgatattcc |
14016729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 14086406 - 14086291
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgt |
115 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| | ||||| ||||||||| || | ||| |
|
|
| T |
14086406 |
cattccctgagtcaatccaagttcaacttttccacttctctttctatcctcgatctctcttggaacagctttgcttcatctttgatattccagtgggtgt |
14086307 |
T |
|
| Q |
116 |
caaacattagttccaa |
131 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
14086306 |
caaacataagttccaa |
14086291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 381
Target Start/End: Original strand, 13471676 - 13471838
Alignment:
| Q |
216 |
acttggcctatcaggtaatagattgaagggtggggtgtttaaatccttcatgaatgtatgcaccttacgttctttagatctgagtggtcaactcaattta |
315 |
Q |
| |
|
||||| ||||||| ||||| ||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||| || | || ||||||| |
|
|
| T |
13471676 |
acttgacctatcatataataaattgaagggtgtggcatttaaatccttcatgaatttatgcgccttacgttctttagatatg---gaagaaaacaattta |
13471772 |
T |
|
| Q |
316 |
acagaagaccttcaaacaattcttcaaaatttgcctagtggttgtgttagaaactcacttcaagtg |
381 |
Q |
| |
|
|| |||||||| ||| |||| |||| |||||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
13471773 |
actgaagacctgcaattaattattcacaatttgtctagtggttgtgttagaaattcacttgaagtg |
13471838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 13891330 - 13891445
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgt |
115 |
Q |
| |
|
||||| |||||| |||| |||||||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||| ||||||||| || | ||| |
|
|
| T |
13891330 |
cattctttgagtaaatcgaagttcaatttttccacatctctttctatccttgatctctcttcgaacaacttcgcatcatctttgatattccagtgggtgt |
13891429 |
T |
|
| Q |
116 |
caaacattagttccaa |
131 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
13891430 |
caaacattagtcccaa |
13891445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 14112215 - 14112155
Alignment:
| Q |
16 |
cattccttgagtcaatccaagttcaacttttccacttctctttctatccttgatctctctt |
76 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
14112215 |
cattcattgagtcaatccaagttcaacttttccaattctctttcaatccttgatctttctt |
14112155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 14048918 - 14048838
Alignment:
| Q |
51 |
ttctctttctatccttgatctctcttataacaacttcgtgtcatccatgatattcccgttgttgtcaaacattagttccaa |
131 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||| |||||||| | | |||||||||||||| |||| |
|
|
| T |
14048918 |
ttctctttctatccttgatctctcttggaacaactttgcgtcatcctcgatattccattgggtgtcaaacattagtcccaa |
14048838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University