View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8966_low_16 (Length: 459)

Name: NF8966_low_16
Description: NF8966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8966_low_16
NF8966_low_16
[»] chr6 (34 HSPs)
chr6 (123-445)||(27646228-27646550)
chr6 (133-445)||(16561693-16562005)
chr6 (123-201)||(16561613-16561691)
chr6 (316-445)||(15402102-15402234)
chr6 (316-445)||(15413889-15414021)
chr6 (316-445)||(15429482-15429614)
chr6 (316-445)||(13288726-13288859)
chr6 (316-445)||(13303693-13303826)
chr6 (316-445)||(26995347-26995480)
chr6 (316-445)||(27029669-27029802)
chr6 (322-445)||(24295347-24295472)
chr6 (322-445)||(24309365-24309490)
chr6 (322-445)||(31541416-31541541)
chr6 (316-445)||(3043412-3043545)
chr6 (316-445)||(12621290-12621423)
chr6 (316-445)||(18815057-18815190)
chr6 (316-445)||(22923880-22924010)
chr6 (316-445)||(22939592-22939722)
chr6 (316-445)||(23862037-23862167)
chr6 (322-445)||(26984454-26984580)
chr6 (322-445)||(27035517-27035643)
chr6 (317-445)||(34471413-34471544)
chr6 (374-445)||(7585081-7585152)
chr6 (374-445)||(20216944-20217015)
chr6 (374-445)||(22110966-22111037)
chr6 (383-445)||(18940370-18940432)
chr6 (316-445)||(19900631-19900764)
chr6 (382-445)||(24852090-24852154)
chr6 (382-445)||(24874116-24874180)
chr6 (387-445)||(32781145-32781201)
chr6 (380-445)||(16767718-16767783)
chr6 (123-188)||(26995192-26995259)
chr6 (123-188)||(27029514-27029581)
chr6 (383-445)||(29628157-29628218)
[»] chr8 (34 HSPs)
chr8 (123-445)||(14359586-14359900)
chr8 (123-445)||(28262647-28262964)
chr8 (323-445)||(27598596-27598717)
chr8 (323-445)||(27613648-27613769)
chr8 (316-445)||(23079150-23079281)
chr8 (317-445)||(12480110-12480240)
chr8 (316-445)||(21337344-21337476)
chr8 (316-445)||(21377305-21377437)
chr8 (322-445)||(14552931-14553056)
chr8 (322-445)||(14573755-14573880)
chr8 (324-445)||(2142021-2142147)
chr8 (324-445)||(2126852-2126977)
chr8 (322-445)||(5516506-5516631)
chr8 (322-445)||(18786561-18786686)
chr8 (382-445)||(16254440-16254503)
chr8 (382-445)||(16264326-16264389)
chr8 (382-445)||(16272912-16272975)
chr8 (382-445)||(19650548-19650611)
chr8 (382-445)||(19661593-19661656)
chr8 (382-445)||(19906635-19906698)
chr8 (382-445)||(22143321-22143384)
chr8 (374-445)||(24461460-24461531)
chr8 (322-445)||(555442-555568)
chr8 (382-445)||(19698506-19698570)
chr8 (382-445)||(29036793-29036856)
chr8 (386-445)||(30367310-30367369)
chr8 (311-445)||(15210282-15210422)
chr8 (383-445)||(18801010-18801070)
chr8 (387-445)||(15324391-15324447)
chr8 (387-445)||(15504760-15504816)
chr8 (387-445)||(14025319-14025375)
chr8 (387-445)||(31339659-31339715)
chr8 (391-445)||(33242257-33242309)
chr8 (391-445)||(33271601-33271653)
[»] chr7 (34 HSPs)
chr7 (123-445)||(30308076-30308391)
chr7 (123-445)||(11414476-11414792)
chr7 (123-445)||(11429460-11429776)
chr7 (123-431)||(5123403-5123704)
chr7 (123-431)||(5158356-5158657)
chr7 (322-445)||(5802074-5802200)
chr7 (322-445)||(14929998-14930123)
chr7 (382-445)||(2149972-2150035)
chr7 (382-445)||(2165183-2165246)
chr7 (317-445)||(5246124-5246255)
chr7 (316-445)||(11361142-11361275)
chr7 (322-445)||(18623023-18623148)
chr7 (374-445)||(6178801-6178872)
chr7 (382-445)||(15353443-15353506)
chr7 (322-445)||(20592592-20592718)
chr7 (322-445)||(10921543-10921668)
chr7 (311-445)||(35971820-35971956)
chr7 (311-445)||(35993232-35993368)
chr7 (382-450)||(39862328-39862396)
chr7 (382-445)||(4186262-4186325)
chr7 (382-445)||(13736240-13736303)
chr7 (382-445)||(14225651-14225714)
chr7 (382-445)||(15918852-15918915)
chr7 (382-445)||(18429882-18429945)
chr7 (382-445)||(39150815-39150878)
chr7 (322-445)||(2968784-2968910)
chr7 (302-445)||(18459712-18459857)
chr7 (385-445)||(4948288-4948348)
chr7 (387-445)||(18539097-18539153)
chr7 (387-445)||(18549606-18549662)
chr7 (387-445)||(36879230-36879286)
chr7 (383-431)||(18137682-18137728)
chr7 (382-431)||(18626941-18626990)
chr7 (316-431)||(26749864-26749982)
[»] chr3 (53 HSPs)
chr3 (123-445)||(10413805-10414123)
chr3 (123-445)||(9530130-9530452)
chr3 (133-445)||(8346205-8346512)
chr3 (317-445)||(11811867-11811995)
chr3 (323-445)||(3392240-3392361)
chr3 (123-201)||(8346125-8346203)
chr3 (316-445)||(1999549-1999681)
chr3 (316-445)||(10600552-10600681)
chr3 (316-445)||(22641632-22641764)
chr3 (316-445)||(4684289-4684421)
chr3 (316-445)||(19928244-19928376)
chr3 (316-445)||(11261186-11261319)
chr3 (316-445)||(4694373-4694505)
chr3 (382-445)||(4882863-4882926)
chr3 (382-445)||(8279175-8279238)
chr3 (382-445)||(8291323-8291386)
chr3 (382-445)||(8307985-8308048)
chr3 (374-445)||(16063674-16063745)
chr3 (382-445)||(18046622-18046685)
chr3 (382-445)||(18062685-18062748)
chr3 (374-445)||(35566523-35566594)
chr3 (317-445)||(5647099-5647230)
chr3 (317-445)||(8226861-8226992)
chr3 (374-445)||(1733205-1733276)
chr3 (382-445)||(14451793-14451856)
chr3 (322-445)||(15730812-15730938)
chr3 (322-445)||(15745897-15746023)
chr3 (382-445)||(26826226-26826289)
chr3 (382-445)||(34799728-34799791)
chr3 (382-445)||(37184844-37184907)
chr3 (317-445)||(5662522-5662652)
chr3 (374-438)||(16419522-16419586)
chr3 (316-445)||(18002899-18003033)
chr3 (387-445)||(35876128-35876184)
chr3 (383-445)||(4786568-4786628)
chr3 (387-445)||(35891198-35891254)
chr3 (387-450)||(28359789-28359850)
chr3 (387-445)||(4445422-4445478)
chr3 (387-445)||(4449585-4449641)
chr3 (383-445)||(4801406-4801466)
chr3 (387-445)||(9722141-9722197)
chr3 (387-445)||(4888835-4888891)
chr3 (391-445)||(19273838-19273890)
chr3 (387-445)||(28012991-28013047)
chr3 (123-188)||(4449356-4449421)
chr3 (383-431)||(4717221-4717267)
chr3 (383-431)||(4732401-4732447)
chr3 (383-431)||(6212670-6212716)
chr3 (383-431)||(18326261-18326307)
chr3 (383-431)||(18341360-18341406)
chr3 (123-173)||(4888601-4888651)
chr3 (386-431)||(6187906-6187949)
chr3 (383-431)||(32964219-32964265)
[»] chr5 (32 HSPs)
chr5 (123-445)||(35396607-35396924)
chr5 (123-445)||(29882019-29882345)
chr5 (322-445)||(23722709-23722835)
chr5 (322-445)||(16682539-16682664)
chr5 (316-445)||(22445541-22445673)
chr5 (316-445)||(30956852-30956984)
chr5 (382-445)||(32449562-32449625)
chr5 (322-445)||(570908-571033)
chr5 (342-445)||(15494607-15494711)
chr5 (316-445)||(24692856-24692990)
chr5 (316-445)||(30929969-30930101)
chr5 (382-445)||(3943850-3943913)
chr5 (374-445)||(18083810-18083881)
chr5 (382-445)||(20193747-20193810)
chr5 (374-445)||(25504272-25504343)
chr5 (374-445)||(35871521-35871592)
chr5 (316-445)||(18061677-18061811)
chr5 (382-445)||(30913168-30913231)
chr5 (383-445)||(22347536-22347598)
chr5 (382-445)||(34497092-34497155)
chr5 (387-445)||(11545786-11545842)
chr5 (387-445)||(11559845-11559901)
chr5 (387-445)||(33772951-33773007)
chr5 (387-445)||(33787903-33787959)
chr5 (383-431)||(22988524-22988570)
chr5 (383-431)||(23003591-23003637)
chr5 (387-445)||(37650954-37651011)
chr5 (387-445)||(23430762-23430817)
chr5 (123-169)||(11545556-11545602)
chr5 (123-169)||(11559615-11559661)
chr5 (302-402)||(23887542-23887644)
chr5 (302-402)||(23902185-23902287)
[»] chr1 (10 HSPs)
chr1 (123-445)||(20321479-20321803)
chr1 (18-127)||(9072749-9072858)
chr1 (316-445)||(18293441-18293574)
chr1 (322-445)||(18289047-18289171)
chr1 (316-445)||(21481417-21481549)
chr1 (374-445)||(18598026-18598097)
chr1 (382-445)||(24654777-24654840)
chr1 (385-445)||(21645447-21645507)
chr1 (383-431)||(47662933-47662979)
chr1 (387-445)||(21505718-21505774)
[»] scaffold0547 (1 HSPs)
scaffold0547 (316-445)||(5288-5418)
[»] chr2 (27 HSPs)
chr2 (316-445)||(39885445-39885574)
chr2 (316-445)||(39901021-39901150)
chr2 (316-445)||(13064949-13065080)
chr2 (342-445)||(37870434-37870538)
chr2 (316-445)||(39757308-39757440)
chr2 (382-445)||(17632444-17632507)
chr2 (316-445)||(24045153-24045284)
chr2 (316-445)||(12650866-12650999)
chr2 (316-445)||(12665787-12665920)
chr2 (314-445)||(28269529-28269663)
chr2 (379-445)||(27687793-27687859)
chr2 (374-445)||(26265777-26265848)
chr2 (374-445)||(26620447-26620518)
chr2 (374-445)||(32236748-32236819)
chr2 (382-445)||(34306428-34306491)
chr2 (382-445)||(40794884-40794947)
chr2 (322-445)||(27424204-27424329)
chr2 (322-445)||(27439248-27439373)
chr2 (382-445)||(34263629-34263692)
chr2 (383-445)||(28877595-28877657)
chr2 (383-445)||(28892805-28892867)
chr2 (342-431)||(20831452-20831542)
chr2 (387-445)||(23121413-23121469)
chr2 (383-431)||(4727359-4727405)
chr2 (387-431)||(5391929-5391971)
chr2 (383-431)||(15713570-15713616)
chr2 (123-188)||(5392135-5392202)
[»] scaffold0089 (2 HSPs)
scaffold0089 (316-445)||(11568-11701)
scaffold0089 (382-445)||(51788-51851)
[»] scaffold0355 (1 HSPs)
scaffold0355 (322-445)||(18148-18273)
[»] chr4 (20 HSPs)
chr4 (316-445)||(17009338-17009470)
chr4 (316-445)||(17023303-17023435)
chr4 (342-445)||(18027798-18027902)
chr4 (316-445)||(40562872-40563003)
chr4 (316-445)||(14656980-14657113)
chr4 (316-445)||(14675414-14675547)
chr4 (322-445)||(9247860-9247985)
chr4 (316-445)||(19639642-19639774)
chr4 (316-445)||(13440966-13441100)
chr4 (316-445)||(20308723-20308855)
chr4 (374-445)||(4865503-4865574)
chr4 (374-445)||(6557435-6557506)
chr4 (382-445)||(40464222-40464285)
chr4 (382-445)||(14658824-14658887)
chr4 (382-445)||(15196311-15196374)
chr4 (382-445)||(34271735-34271798)
chr4 (316-445)||(22111648-22111779)
chr4 (123-188)||(24582249-24582315)
chr4 (123-188)||(24597077-24597143)
chr4 (383-431)||(5317201-5317247)
[»] scaffold0240 (1 HSPs)
scaffold0240 (317-445)||(20615-20746)
[»] scaffold0001 (1 HSPs)
scaffold0001 (314-445)||(72886-73020)
[»] scaffold1704 (1 HSPs)
scaffold1704 (322-445)||(682-807)
[»] scaffold0061 (1 HSPs)
scaffold0061 (382-445)||(32083-32146)
[»] scaffold0017 (1 HSPs)
scaffold0017 (382-445)||(166645-166708)
[»] scaffold0112 (1 HSPs)
scaffold0112 (383-445)||(11786-11848)
[»] scaffold1665 (1 HSPs)
scaffold1665 (383-440)||(131-188)
[»] scaffold0186 (1 HSPs)
scaffold0186 (316-445)||(13518-13650)
[»] scaffold0597 (1 HSPs)
scaffold0597 (382-422)||(9979-10019)
[»] scaffold0029 (1 HSPs)
scaffold0029 (387-445)||(4930-4987)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 123 - 445
Target Start/End: Original strand, 27646228 - 27646550
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||    
T  27646228 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcatttttttttt-tattatcatt 27646326  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtttt-ctttttg 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27646327 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtttttctttttg 27646426  T
Q  322 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27646427 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 27646526  T
Q  422 gactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||    
T  27646527 gactatggacactataagtgatgt 27646550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 133 - 445
Target Start/End: Original strand, 16561693 - 16562005
Alignment:
Q  133 tatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcattttgtacttgt 232  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||           ||||||||||||||||||||    
T  16561693 tatttttactactttgtttcgttgcattattttctttctcttgtgctattcaattcaacattgcttgcatctttttttattattatcattttgtacttgt 16561792  T
Q  233 gttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgtattcatttct 332  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16561793 gttactaactcttatgcttcatatctcattcattccataagcacctaatctttgtactctcattgctcctagtttaggttttctttttgtattcatttct 16561892  T
Q  333 atgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggaca 432  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16561893 atgccaactggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcgatgtaaaggactatggaca 16561992  T
Q  433 ctataagtgatgt 445  Q
    |||||||||||||    
T  16561993 ctataagtgatgt 16562005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 16561613 - 16561691
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  16561613 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattcaacattgcttgca 16561691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 15402234 - 15402102
Alignment:
Q  316 tttttgtattcatttctatgccaattg-gtttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  |||||| ||||||||||| ||||| ||| |||||| |  |||| |||| ||||||||||||||||||||| ||||||||    
T  15402234 tttttttattcatttctatatcaattgagtttgtaataattttagatagattagttcttttttaaattccttgcaagaccatagcatgtatttaggactc 15402135  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  15402134 aatgtaaaggactatggacactataagtgatgt 15402102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 15414021 - 15413889
Alignment:
Q  316 tttttgtattcatttctatgccaattg-gtttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  |||||| ||||||||||| ||||| ||| |||||| |  |||| |||| ||||||||||||||||||||| ||||||||    
T  15414021 tttttttattcatttctatatcaattgagtttgtaataattttagatagattagttcttttttaaattccttgcaagaccatagcatgtatttaggactc 15413922  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  15413921 aatgtaaaggactatggacactataagtgatgt 15413889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 15429614 - 15429482
Alignment:
Q  316 tttttgtattcatttctatgccaattg-gtttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  |||||| ||||||||||| ||||| ||| |||||| |  |||| |||| ||||||||||||||||||||| ||||||||    
T  15429614 tttttttattcatttctatatcaattgagtttgtaataattttagatagattagttcttttttaaattccttgcaagaccatagcatgtatttaggactc 15429515  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  15429514 aatgtaaaggactatggacactataagtgatgt 15429482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 13288859 - 13288726
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt--acattctt-gcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | |||||| |||||||||||||||||||||||||||    
T  13288859 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaaattctttgcaagaccatagcatgtatctaggact 13288760  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  13288759 caatgtaaaggactatggacactataagtgatgt 13288726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 13303826 - 13303693
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt--acattctt-gcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | |||||| |||||||||||||||||||||||||||    
T  13303826 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaaattctttgcaagaccatagcatgtatctaggact 13303727  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  13303726 caatgtaaaggactatggacactataagtgatgt 13303693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 26995347 - 26995480
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt--acattctt-gcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | |||||| |||||||||||||||||||||||||||    
T  26995347 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaaattctttgcaagaccatagcatgtatctaggact 26995446  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  26995447 caatgtaaaggactatggacactataagtgatgt 26995480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 27029669 - 27029802
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt--acattctt-gcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | |||||| |||||||||||||||||||||||||||    
T  27029669 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaaattctttgcaagaccatagcatgtatctaggact 27029768  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  27029769 caatgtaaaggactatggacactataagtgatgt 27029802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 24295472 - 24295347
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattctt-gcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||| |||||| |||||||||||||||||||||||||||||||||||    
T  24295472 tattcatttctatatcaattgggtttgtaataattttagatagattagttccttttaaattctttgcaagaccatagcatgtatctaggactcaatgtaa 24295373  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||| |||||| |||||    
T  24295372 aggactatggacattataagggatgt 24295347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 24309490 - 24309365
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattctt-gcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||| |||||| |||||||||||||||||||||||||||||||||||    
T  24309490 tattcatttctatatcaattgggtttgtaataattttagatagattagttccttttaaattctttgcaagaccatagcatgtatctaggactcaatgtaa 24309391  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||| |||||| |||||    
T  24309390 aggactatggacattataagggatgt 24309365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 31541416 - 31541541
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    ||||||||||||| |||| ||| |||||||||| ||||| ||| ||||||   |||  ||| |||||||||||||||||||||| |||||||||||||||    
T  31541416 tattcatttctataccaaatgggtttgtaataattttaggtagattagttcccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 31541515  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  31541516 aggactatggacactataagtgatgt 31541541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 3043412 - 3043545
Alignment:
Q  316 tttttgtattcatttctatgccaattgg--tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  |||||||  |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| |||||||    
T  3043412 tttttctattcatttctatatcaattgggttttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggact 3043511  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  3043512 caatgtaaaggactatggacactataagtgatgt 3043545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 12621290 - 12621423
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacatt-cttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| ||| |||||||||||||||||||||| |||||||    
T  12621290 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaatttcttgcaagaccatagcatgtatttaggact 12621389  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||| ||||||||||||||||||||||||    
T  12621390 caatgtaaaagactatggacactataagtgatgt 12621423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 18815190 - 18815057
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||| |||||||    
T  18815190 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatttaggact 18815091  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||| |||||    
T  18815090 caatgtaaaggactatggacactataagggatgt 18815057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 22924010 - 22923880
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||||   ||||  | |||||||||||||||||||||| ||||||||||    
T  22924010 tttttctattcatttctatatcaaatgggtttgtaataattttagatagattagttccttttaattccttgcaagaccatagcatgtatttaggactcaa 22923911  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||| ||||    
T  22923910 tgtaaaggactatggacactataagtaatgt 22923880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 22939722 - 22939592
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||||   ||||  | |||||||||||||||||||||| ||||||||||    
T  22939722 tttttctattcatttctatatcaaatgggtttgtaataattttagatagattagttccttttaattccttgcaagaccatagcatgtatttaggactcaa 22939623  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||| ||||    
T  22939622 tgtaaaggactatggacactataagtaatgt 22939592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 23862167 - 23862037
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||||   ||||  | |||||||||||||||||||||| ||||||||||    
T  23862167 tttttctattcatttctatatcaaatgggtttgtaataattttagatagattagttccttttaattccttgcaagaccatagcatgtatttaggactcaa 23862068  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||| ||||    
T  23862067 tgtaaaggactatggacactataagtaatgt 23862037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 26984454 - 26984580
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  26984454 tattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatagcatgtatttaggactcaatgta 26984553  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||    
T  26984554 aaggactatggacactataagtgatgt 26984580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 27035517 - 27035643
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  27035517 tattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatagcatgtatttaggactcaatgta 27035616  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||    
T  27035617 aaggactatggacactataagtgatgt 27035643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 317 - 445
Target Start/End: Complemental strand, 34471544 - 34471413
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactca 413  Q
    |||| ||||||||||||   ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| |||||||||    
T  34471544 ttttctattcatttctacatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggactca 34471445  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||    
T  34471444 atgtaaaggactatggacactataagtgatgt 34471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 7585081 - 7585152
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  7585081 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 7585152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 20216944 - 20217015
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20216944 tttaaatttttgcaagaccatagaatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 20217015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 22110966 - 22111037
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22110966 tttaaatttttgcaagaccatagaatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 22111037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 18940370 - 18940432
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18940370 ttgcaagaccatagaatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 18940432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 19900764 - 19900631
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggact 411  Q
    ||||| ||||||||||||   ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||| |||||||    
T  19900764 tttttttattcatttctacatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatttaggact 19900665  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||| |||||    
T  19900664 caatgtaaaggactatggacactataagggatgt 19900631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 24852090 - 24852154
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaa-tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  24852090 cttgcaagaccatagcatgtatttaggactcaaatgtaaaggactatggacactataagtgatgt 24852154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 24874116 - 24874180
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaa-tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  24874116 cttgcaagaccatagcatgtatttaggactcaaatgtaaaggactatggacactataagtgatgt 24874180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 32781201 - 32781145
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  32781201 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 32781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 16767783 - 16767718
Alignment:
Q  380 ttcttgcaagaccatagcatgtat-ctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||| |||||  ||||| | ||||||||||||||||||||||||||||||||||    
T  16767783 ttcttgcaagaccatagaatgtaaactagggc-caatgtaaaggactatggacactataagtgatgt 16767718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 26995192 - 26995259
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcatta--ttttctttctcttgtgctattcaattc 188  Q
    ||||||||||||||||||| ||||| ||||||| |||||  |||| |||||||  |||||||| ||||    
T  26995192 attctaggtgtatttttaccactttatttcatttcattactttttttttctctcttgctattctattc 26995259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 27029514 - 27029581
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcatta--ttttctttctcttgtgctattcaattc 188  Q
    ||||||||||||||||||| ||||| ||||||| |||||  |||| |||||||  |||||||| ||||    
T  27029514 attctaggtgtatttttaccactttatttcatttcattactttttttttctctcttgctattctattc 27029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 29628157 - 29628218
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgt-aaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||||||||||  |||||| |||||||||||||| || ||| ||||||    
T  29628157 ttgcaagaccatagaatgtatctagga--caatgtaaaaggactatggactctctaaatgatgt 29628218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 123 - 445
Target Start/End: Complemental strand, 14359900 - 14359586
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | ||||||||    
T  14359900 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcattt--------ttttatcatt 14359809  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14359808 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctaatttaggttttctttttgt 14359709  T
Q  323 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14359708 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 14359609  T
Q  423 actatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||    
T  14359608 actatggacactataagtgatgt 14359586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 123 - 445
Target Start/End: Original strand, 28262647 - 28262964
Alignment:
Q  123 attctaggtgtattttt-actactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcat 221  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           | |||||||    
T  28262647 attctaggtgtattttttaccactttgtttcattgcattatcttctttctcttgtgctattcaattctatattgcttgcattctt------ttttatcat 28262740  T
Q  222 tttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttg 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28262741 tttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtcttctttttg 28262840  T
Q  322 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28262841 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 28262940  T
Q  422 gactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||    
T  28262941 gactatggacactataagtgatgt 28262964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 323 - 445
Target Start/End: Complemental strand, 27598717 - 27598596
Alignment:
Q  323 attcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  27598717 attcatttctatatcaattgggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctagga--caatgtaaag 27598620  T
Q  422 gactatggacactataagtgatgt 445  Q
    ||||||||||| |||||| |||||    
T  27598619 gactatggacattataagggatgt 27598596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 323 - 445
Target Start/End: Complemental strand, 27613769 - 27613648
Alignment:
Q  323 attcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  27613769 attcatttctatatcaattgggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctagga--caatgtaaag 27613672  T
Q  422 gactatggacactataagtgatgt 445  Q
    ||||||||||| |||||| |||||    
T  27613671 gactatggacattataagggatgt 27613648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 23079150 - 23079281
Alignment:
Q  316 tttttgtattcatttctatgccaattggt-ttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactca 413  Q
    ||||| ||||||||||||| |||| |||  ||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| |||||||||    
T  23079150 tttttctattcatttctataccaaatgggcttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttaggactca 23079249  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||    
T  23079250 atgtaaaggactatggacactataagtgatgt 23079281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 445
Target Start/End: Complemental strand, 12480240 - 12480110
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaa 414  Q
    |||| |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| ||||||||||    
T  12480240 ttttctattcatttctatatcaaatgggtttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttaggactcaa 12480141  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||    
T  12480140 tgtaaaggactatggacactataagtgatgt 12480110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 21337476 - 21337344
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttaca-ttctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | ||||| ||||||||||||||||||||||||||||    
T  21337476 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttgaattctttgcaagaccatagcatgtatctaggactc 21337377  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  21337376 aatgtaaaggactatggacactataagtgatgt 21337344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 21377437 - 21377305
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttaca-ttctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | ||||| ||||||||||||||||||||||||||||    
T  21377437 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttgaattctttgcaagaccatagcatgtatctaggactc 21377338  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  21377337 aatgtaaaggactatggacactataagtgatgt 21377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 14552931 - 14553056
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| || |||   |||  |||| ||||||||||||||||||||| |||||||||||||||    
T  14552931 tattcatttctatatcaattgggtttgtaataattttagatagattggttcttttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 14553030  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  14553031 aggactatggacactataagtgatgt 14553056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 14573755 - 14573880
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| || |||   |||  |||| ||||||||||||||||||||| |||||||||||||||    
T  14573755 tattcatttctatatcaattgggtttgtaataattttagatagattggttcttttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 14573854  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  14573855 aggactatggacactataagtgatgt 14573880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 445
Target Start/End: Complemental strand, 2142147 - 2142021
Alignment:
Q  324 ttcatttctatgccaattgg-tttgtaataaatttagttagtttagtt---tagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |  |||| |||| ||||||||||||||||||||||||||||||||||||    
T  2142147 ttcatttctatatcaattgggtttgtaataattttagatagattagttcttttttttaaattccttgcaagaccatagcatgtatctaggactcaatgta 2142048  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||| |||||    
T  2142047 aaggactatggacactataagcgatgt 2142021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 445
Target Start/End: Complemental strand, 2126977 - 2126852
Alignment:
Q  324 ttcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||||||| |||||||||||    
T  2126977 ttcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatctagaactcaatgtaa 2126878  T
Q  420 aggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||| |||||    
T  2126877 aggactatggacactataagcgatgt 2126852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 5516631 - 5516506
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    ||||||||||||   ||||||| |||||||||| ||||| ||| ||||||   |||| |||| ||||||||||||||||||||| ||||||||||| |||    
T  5516631 tattcatttctacatcaattgggtttgtaataattttagatagattagttctttttaaattccttgcaagaccatagcatgtatttaggactcaatataa 5516532  T
Q  420 aggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||| |||||    
T  5516531 aggactatggacactataagggatgt 5516506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 18786686 - 18786561
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||| |||| ||||||||||||||||||||| ||||||||| |||||    
T  18786686 tattcatttctatatcaaatgggtttgtaataactttagatagattagttttttttaaattccttgcaagaccatagcatgtatttaggactcagtgtaa 18786587  T
Q  420 aggactatggacactataagtgatgt 445  Q
    |||||||||||| ||||||| |||||    
T  18786586 aggactatggacgctataagagatgt 18786561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 16254503 - 16254440
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16254503 cttgcaagaccatagcatgtatttaggactcaatgtaaaagactatggacactataagtgatgt 16254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 16264326 - 16264389
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  16264326 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 16264389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 16272912 - 16272975
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  16272912 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 16272975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 19650611 - 19650548
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  19650611 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 19650548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 19661656 - 19661593
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  19661656 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 19661593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 19906698 - 19906635
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19906698 cttgcaggaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 19906635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 22143321 - 22143384
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  22143321 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 22143384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 24461531 - 24461460
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  24461531 tttaaattcttgcaagaccatagcatgtatttgggactcgatgtaaaggactatggacactataagtgatgt 24461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 555442 - 555568
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattc-ttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||| |||||||||||||| |||||| ||||||||||||||    
T  555442 tattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattccttgcaagaccatagtatgtatttaggactcaatgta 555541  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    ||||| |||||||||||||||||||||    
T  555542 aaggattatggacactataagtgatgt 555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 19698506 - 19698570
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgt-aaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  19698506 cttgcaagaccatagcatgtatttaggactcaatgtaaaaggactatggacactataagtgatgt 19698570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 29036793 - 29036856
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  29036793 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataactgatgt 29036856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 30367369 - 30367310
Alignment:
Q  386 caagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  30367369 caagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 30367310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 15210282 - 15210422
Alignment:
Q  311 ttttctttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccat---agcatgtatc 404  Q
    |||| ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||   ||||||||||    
T  15210282 ttttttttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatcatagcatgtatc 15210381  T
Q  405 taggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  15210382 taggagtcaatgtaaaggactatggacactataagcgatgt 15210422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 18801010 - 18801070
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  18801010 ttgcaagaccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 18801070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 15324391 - 15324447
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  15324391 aagaccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 15324447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 15504760 - 15504816
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  15504760 aagaccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 15504816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 14025375 - 14025319
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  14025375 aagaccgtagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 14025319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 31339715 - 31339659
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  31339715 aagaccataacatgtatctaggac--aatgtaaaggactatggacattataagggatgt 31339659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 33242257 - 33242309
Alignment:
Q  391 ccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  33242257 ccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 33242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 33271601 - 33271653
Alignment:
Q  391 ccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  33271601 ccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 33271653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 123 - 445
Target Start/End: Original strand, 30308076 - 30308391
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | ||||||||    
T  30308076 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcatttt-------ttttatcatt 30308168  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30308169 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctaatttaggttttctttttgt 30308268  T
Q  323 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30308269 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 30308368  T
Q  423 actatggacactataagtgatgt 445  Q
    |||||||||| ||||||||||||    
T  30308369 actatggacattataagtgatgt 30308391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 123 - 445
Target Start/End: Complemental strand, 11414792 - 11414476
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | ||||||||    
T  11414792 attctaggtgtatttttaccactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcattctt------ttttatcatt 11414699  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||    
T  11414698 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcttagtttaggtcttcttttcgt 11414599  T
Q  323 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11414598 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagcccatagcatgtatctaggactcaatgtaaagg 11414499  T
Q  423 actatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||    
T  11414498 actatggacactataagtgatgt 11414476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 123 - 445
Target Start/End: Complemental strand, 11429776 - 11429460
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | ||||||||    
T  11429776 attctaggtgtatttttaccactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcattctt------ttttatcatt 11429683  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||    
T  11429682 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcttagtttaggtcttcttttcgt 11429583  T
Q  323 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11429582 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagcccatagcatgtatctaggactcaatgtaaagg 11429483  T
Q  423 actatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||    
T  11429482 actatggacactataagtgatgt 11429460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 123 - 431
Target Start/End: Original strand, 5123403 - 5123704
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||           | ||||||||    
T  5123403 attctaggtgtatttttaccactttgtttcattgcattattttctttctcttgtgctcttcaattctatattgcttgcattctt------ttttatcatt 5123496  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttagg-ttttctttttg 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5123497 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtttttctttttg 5123596  T
Q  322 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  5123597 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagaatgtatctagga--caatgtaaag 5123694  T
Q  422 gactatggac 431  Q
    ||||||||||    
T  5123695 gactatggac 5123704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 123 - 431
Target Start/End: Original strand, 5158356 - 5158657
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||           | ||||||||    
T  5158356 attctaggtgtatttttaccactttgtttcattgcattattttctttctcttgtgctcttcaattctatattgcttgcattctt------ttttatcatt 5158449  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttagg-ttttctttttg 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5158450 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtttttctttttg 5158549  T
Q  322 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  5158550 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagaatgtatctagga--caatgtaaag 5158647  T
Q  422 gactatggac 431  Q
    ||||||||||    
T  5158648 gactatggac 5158657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 5802200 - 5802074
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||||||||||||||||||||||||||    
T  5802200 tattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatagcatgtatctaggactcaatgta 5802101  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||    
T  5802100 aaggactatggacactataagtgatgt 5802074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 14930123 - 14929998
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattctt-gcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||  |||||| ||||||||||||||||||| |||||||||||||||    
T  14930123 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtttccttttaattctttgcaagaccatagcatgtatttaggactcaatgtaa 14930024  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  14930023 aggactatggacactataagtgatgt 14929998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 2149972 - 2150035
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2149972 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 2150035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 2165183 - 2165246
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165183 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 2165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 5246124 - 5246255
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactca 413  Q
    |||| |||||||||||||  ||||||| |||||||||| ||||| ||| |||||| |  |||| |||| ||||||||||||||||||||| |||||||||    
T  5246124 ttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcttttttaaattccttgcaagaccatagcatgtatttaggactca 5246223  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||| |||||    
T  5246224 atgtaaaggactatggacactataagggatgt 5246255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 11361142 - 11361275
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt---tagtttacattcttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |  ||||  | ||||||||||||||||||||||||||||||    
T  11361142 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttttagttccttgcaagaccatagcatgtatctaggact 11361241  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    | ||||||||||||||||||||||||||||||||    
T  11361242 cgatgtaaaggactatggacactataagtgatgt 11361275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 18623023 - 18623148
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  | |  |||| ||||||||||||||||||||| |||||||||||||||    
T  18623023 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtttcctcttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 18623122  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  18623123 aggactatggacactataagtgatgt 18623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 6178801 - 6178872
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6178801 tttaaatttttgcaagaccatagcatgtacctaggactcaatgtaaaggactatggacactataagtgatgt 6178872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 15353506 - 15353443
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15353506 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 15353443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 20592592 - 20592718
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||| ||||||||    
T  20592592 tattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggattcaatgta 20592691  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||    
T  20592692 aaggactatggacactataagtgatgt 20592718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 10921668 - 10921543
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||| |||| ||||||||||||||||||||| ||||||||| |||||    
T  10921668 tattcatttctatatcaaatgggtttgtaataactttagatagattagttttttttaaattccttgcaagaccatagcatgtatttaggactcagtgtaa 10921569  T
Q  420 aggactatggacactataagtgatgt 445  Q
    |||||||||||| ||||||| |||||    
T  10921568 aggactatggacgctataagcgatgt 10921543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 35971820 - 35971956
Alignment:
Q  311 ttttctttttgtattcatttctatgccaattggt-ttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctagg 408  Q
    |||||||||  | ||||||||||| |||| |||  ||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| ||||    
T  35971820 ttttcttttcttcttcatttctataccaaatgggcttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttagg 35971919  T
Q  409 actcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  35971920 actcgatgtaaaggactatggacattataagtgatgt 35971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 35993232 - 35993368
Alignment:
Q  311 ttttctttttgtattcatttctatgccaattggt-ttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctagg 408  Q
    |||||||||  | ||||||||||| |||| |||  ||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| ||||    
T  35993232 ttttcttttcttcttcatttctataccaaatgggcttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttagg 35993331  T
Q  409 actcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  35993332 actcgatgtaaaggactatggacattataagtgatgt 35993368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 450
Target Start/End: Complemental strand, 39862396 - 39862328
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgtccatc 450  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||    
T  39862396 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgtacatc 39862328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 4186262 - 4186325
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4186262 cttgcaagaccataacatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 4186325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 13736303 - 13736240
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  13736303 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactattagtgatgt 13736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 14225714 - 14225651
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  14225714 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 14225651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 15918915 - 15918852
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  15918915 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 15918852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 18429882 - 18429945
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  18429882 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 18429945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 39150815 - 39150878
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  39150815 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 39150878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 2968784 - 2968910
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    ||||||||||||   ||||||| |||||||||| ||||| ||| |||||| |  |||| |||| ||||||||||||||||||||| ||||||||||||||    
T  2968784 tattcatttctacatcaattgggtttgtaataattttagatagattagttcttttttaaattccttgcaagaccatagcatgtatttaggactcaatgta 2968883  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    |||||||||| ||| ||||||||||||    
T  2968884 aaggactatgaacattataagtgatgt 2968910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 445
Target Start/End: Complemental strand, 18459857 - 18459712
Alignment:
Q  302 tagtttaggttttctttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcat 399  Q
    |||||||||  || ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| |||  ||  |||  ||| || |||||||||||||||    
T  18459857 tagtttaggcattatttttctattcatttctatatcaaatgggtttgtaataattttaggtagattaactttcttttaattactcgcaagaccatagcat 18459758  T
Q  400 gtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||    
T  18459757 gtatttaggactcgttgtaaaggactatggacactataagtgatgt 18459712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 4948288 - 4948348
Alignment:
Q  385 gcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  4948288 gcaagaccatagcatgtatttaggactcgatgtaaaggactatggactctataagtgatgt 4948348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 18539097 - 18539153
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  18539097 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 18539153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 18549606 - 18549662
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  18549606 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 18549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 36879286 - 36879230
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||| ||||| |||||||  ||||||||||||||||||||||||||| |||||    
T  36879286 aagaccatagaatgtaactaggac--aatgtaaaggactatggacactataagggatgt 36879230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 18137682 - 18137728
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  18137682 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 18137728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 18626941 - 18626990
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    ||||||||||| |||||||||  |||||||||||||||||||| ||||||    
T  18626941 cttgcaagaccgtagcatgtagttaggactcaatgtaaaggacaatggac 18626990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 431
Target Start/End: Complemental strand, 26749982 - 26749864
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagttt--agtttacattcttgcaagaccatagcatgtat-ctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| |||||||||||  | |||| ||| | |||||||| ||| |||||| |||||||     
T  26749982 tttttctattcatttctatatcaattgggtttgtaataattttagatagtttagtttccatttta-attttcgcaagaccgtagaatgtatactaggaca 26749884  T
Q  412 caatgtaaaggactatggac 431  Q
     ||||||| |||||||||||    
T  26749883 aaatgtaacggactatggac 26749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 123 - 445
Target Start/End: Original strand, 10413805 - 10414123
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           ||||||||||    
T  10413805 attctaggtgaatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgctttcattttttt----tattatcatt 10413900  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10413901 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 10414000  T
Q  323 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  10414001 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatttaggactcgatgtaaagg 10414100  T
Q  423 actatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||    
T  10414101 actatggacactataagtgatgt 10414123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 123 - 445
Target Start/End: Original strand, 9530130 - 9530452
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||    
T  9530130 attctaggtgtatttttactactttgtttcgttgcattattttctttctcttgtgctattcaattctatattgcttgcatctttttttattattatcatt 9530229  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgt 322  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9530230 ttgtacctgtgttactaactcttatgcttcatatctcattcattccataagcacctaatctttgtactctcattgctcctagtttaggttttctttttgt 9530329  T
Q  323 attcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9530330 attcatttctatgccaactggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcgatgtaaagg 9530429  T
Q  423 actatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||    
T  9530430 actatggacactataagtgatgt 9530452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 133 - 445
Target Start/End: Original strand, 8346205 - 8346512
Alignment:
Q  133 tatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcattttgtacttgt 232  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||    
T  8346205 tatttttactactttgtttcgttgcattattttctttctcttgtgctattcaattctatattgcttgcatttttt-----tattatcattttgtacttgt 8346299  T
Q  233 gttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgtattcatttct 332  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8346300 gttactaactcttatgcttcatatttcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttctttttgtattcatttct 8346399  T
Q  333 atgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggaca 432  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8346400 atgccatttggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagaatgtatctaggactcaatgtaaaggactatggaca 8346499  T
Q  433 ctataagtgatgt 445  Q
    |||||||||||||    
T  8346500 ctataagtgatgt 8346512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 11811867 - 11811995
Alignment:
Q  317 ttttgtattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatg 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11811867 ttttgtattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatg 11811966  T
Q  417 taaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||    
T  11811967 taaaggactatggacactataagtgatgt 11811995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 323 - 445
Target Start/End: Original strand, 3392240 - 3392361
Alignment:
Q  323 attcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  3392240 attcatttctatatcaattgggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctagga--caatgtaaag 3392337  T
Q  422 gactatggacactataagtgatgt 445  Q
    ||||||||||| |||||| |||||    
T  3392338 gactatggacattataagggatgt 3392361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 8346125 - 8346203
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  8346125 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattcaacattgcttgca 8346203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 1999549 - 1999681
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt-tagtttacattctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| |||||| |  |||  |||||| ||||||||||||||||||||||||||||    
T  1999549 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcttttttttattctttgcaagaccatagcatgtatctaggactc 1999648  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  1999649 aatgtaaaggactatggacactataagtgatgt 1999681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 10600552 - 10600681
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| |||||||  ||||  | |||||||||||||||||||||||||||||||||    
T  10600552 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttttttttat-tccttgcaagaccatagcatgtatctaggactcaa 10600650  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||| |||||| |||||    
T  10600651 tgtaaaggactatggacattataagggatgt 10600681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 22641764 - 22641632
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||||||    
T  22641764 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggactc 22641665  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  22641664 aatgtaaaggactatggacactataagtgatgt 22641632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 4684289 - 4684421
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| |||||| |  |||| |||| ||||||||||||||||||||| ||||||||    
T  4684289 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcttttttaaattccttgcaagaccatagcatgtatttaggactc 4684388  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||| |||||    
T  4684389 aatgtaaaggactatggacactataagggatgt 4684421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 19928244 - 19928376
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||| ||||||||||||||||||||| ||||||||    
T  19928244 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattccttgcaagaccatagcatgtatttaggactc 19928343  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  19928344 aatgtaaaggactatggacactataagtgatgt 19928376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 11261319 - 11261186
Alignment:
Q  316 tttttgtattcatttctatgccaattgg--tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  |||||||  |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| |||||||    
T  11261319 tttttctattcatttctatatcaattgggatttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggact 11261220  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  11261219 caatgtaaaggactatggacactataagtgatgt 11261186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 4694373 - 4694505
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt-tagtttacattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| |||||| |  |||| |||| || |||||||||||||||||| ||||||||    
T  4694373 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcttttttaaattcctttcaagaccatagcatgtatttaggactc 4694472  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||| |||||    
T  4694473 aatgtaaaggactatggacactataagggatgt 4694505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 4882863 - 4882926
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4882863 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 4882926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 8279238 - 8279175
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8279238 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 8279175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 8291323 - 8291386
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8291323 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagggatgt 8291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 8308048 - 8307985
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8308048 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 8307985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 16063745 - 16063674
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  16063745 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 16063674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 18046622 - 18046685
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18046622 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 18046685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 18062685 - 18062748
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18062685 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 18062748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 35566594 - 35566523
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35566594 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 35566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 5647099 - 5647230
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactca 413  Q
    |||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||| ||||| |||||||||    
T  5647099 ttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcttgtatttaggactca 5647198  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||| |||||    
T  5647199 atgtaaaggactatggacactataagggatgt 5647230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 445
Target Start/End: Complemental strand, 8226992 - 8226861
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactca 413  Q
    |||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||| |||    
T  8226992 ttttttattcatttctatatcaattgggtttgtaataattttagatagattagttccttttttaattccttgcaagaccatagcatgtatttaggattca 8226893  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||| ||||||    
T  8226892 atgtaaaggactatggacactataaatgatgt 8226861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 1733276 - 1733205
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  1733276 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataaatgatgt 1733205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 14451856 - 14451793
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  14451856 cttgcaagaccatagcatgtatttaggactcaatgtagaggactatggacactataagtgatgt 14451793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 15730938 - 15730812
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||| ||||||||    
T  15730938 tattcatttctatatcaattgggtttgtaataattttagatagattagttccttttttaattccttgcaagaccatagcatgtatttaggattcaatgta 15730839  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    ||||||||||||| |||||||||||||    
T  15730838 aaggactatggacgctataagtgatgt 15730812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 15746023 - 15745897
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||| ||||||||    
T  15746023 tattcatttctatatcaattgggtttgtaataattttagatagattagttccttttttaattccttgcaagaccatagcatgtatttaggattcaatgta 15745924  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    ||||||||||||| |||||||||||||    
T  15745923 aaggactatggacgctataagtgatgt 15745897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 26826289 - 26826226
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  26826289 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 26826226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 34799791 - 34799728
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  34799791 cttgcaagaccatagcatgtatttaggactcactgtaaaggactatggacactataagtgatgt 34799728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 37184907 - 37184844
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  37184907 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 37184844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 5662522 - 5662652
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactca 413  Q
    |||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | ||||||| |||||||||||||| |||||||||    
T  5662522 ttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaa-accatagcatgtatttaggactca 5662620  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||| |||||    
T  5662621 atgtaaaggactatggacactataagggatgt 5662652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 438
Target Start/End: Complemental strand, 16419586 - 16419522
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataa 438  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16419586 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataa 16419522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 18002899 - 18003033
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt---acattc-ttgcaagaccatagcatgtatctaggac 410  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||   | |||| ||||||||||||| ||||||| ||||||    
T  18002899 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaaattccttgcaagaccatatcatgtatttaggac 18002998  T
Q  411 tcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||| |||||    
T  18002999 tcaatgtaaaggactatggacactataagggatgt 18003033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 35876128 - 35876184
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  35876128 aagaccatagcatgtatctaggac--aatgtaaaggactatggacactataagtgatgt 35876184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 4786628 - 4786568
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  4786628 ttgcaagaccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 4786568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 35891198 - 35891254
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  35891198 aagaccatatcatgtatctaggac--aatgtaaaggactatggacactataagtgatgt 35891254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 28359789 - 28359850
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgtccatc 450  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||| ||||    
T  28359789 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgtacatc 28359850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 4445422 - 4445478
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  4445422 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 4445478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 4449585 - 4449641
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  4449585 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 4449641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 4801466 - 4801406
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  4801466 ttgcaagaccatagaatgtaactaggac--aatgtaaatgactatggacactataagtgatgt 4801406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 9722197 - 9722141
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  9722197 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 9722141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 4888835 - 4888891
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  4888835 aagaccataacatgtatctaggac--aatgtaaaggactatggacattataagggatgt 4888891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 19273838 - 19273890
Alignment:
Q  391 ccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||||||||||||    
T  19273838 ccatagaatgtaactaggac--aatgtaaaggactatggacactataagtgatgt 19273890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 28012991 - 28013047
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||| |||||| |||||    
T  28012991 aagaccatagcatgtatctagga--caatgtaaaggactatgaacattataagggatgt 28013047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 4449356 - 4449421
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattc 188  Q
    ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||||  |||||||| ||||    
T  4449356 attctaggtgtatttttaccactttatttcatttcattactttttttctctcttgctattctattc 4449421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 4717221 - 4717267
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  4717221 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 4717267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 4732401 - 4732447
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  4732401 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 4732447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 6212670 - 6212716
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  6212670 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 6212716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 18326261 - 18326307
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  18326261 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 18326307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 18341360 - 18341406
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  18341360 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 18341406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 4888601 - 4888651
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctct 173  Q
    ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||||    
T  4888601 attctaggtgtatttttaccactttatttcatttcattactttttttctct 4888651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 6187906 - 6187949
Alignment:
Q  386 caagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  6187906 caagaccatagaatgtatctagga--caatgtaaaggactatggac 6187949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 32964265 - 32964219
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||| ||||||||| |||||||||||||  |||||||||||||||||||    
T  32964265 ttgccagaccatagaatgtatctaggac--aatgtaaaggactatggac 32964219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 123 - 445
Target Start/End: Complemental strand, 35396924 - 35396607
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattatcatt 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||           | ||||||||    
T  35396924 attctaggtgtatttttaccactttgtttcattgcattattttctttttcttgtgctcttcaattctatattgcttgcattctt------ttttatcatt 35396831  T
Q  223 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtttt-ctttttg 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35396830 ttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggtttttctttttg 35396731  T
Q  322 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35396730 tattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaag 35396631  T
Q  422 gactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||    
T  35396630 gactatggacactataagtgatgt 35396607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 123 - 445
Target Start/End: Complemental strand, 29882345 - 29882019
Alignment:
Q  123 attctaggtgtattttt-actactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnctattat--- 218  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||       
T  29882345 attctaggtgtattttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcatcttttttttttattattat 29882246  T
Q  219 cattttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttcttt 318  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29882245 cattttgtacttgtgttactaactcttatgcttcatatctcattcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttcttt 29882146  T
Q  319 ttgtattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgta 418  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29882145 ttgtattcatttctatgccaattggtttgtactaaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgta 29882046  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    || ||||||||||||||||||||||||    
T  29882045 aatgactatggacactataagtgatgt 29882019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 23722835 - 23722709
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccatagcatgtatctaggactcaatgta 418  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||||||||||||||||||||||||||    
T  23722835 tattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatagcatgtatctaggactcaatgta 23722736  T
Q  419 aaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||    
T  23722735 aaggactatggacactataagtgatgt 23722709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 16682539 - 16682664
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| |||||||||||||||    
T  16682539 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 16682638  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  16682639 aggactatggacactataagtgatgt 16682664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 22445541 - 22445673
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttaca-ttctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | ||||| ||||||||||||||||||||||||||||    
T  22445541 tttttctattcatttctatatcaattgggtttgtaataactttagatagattagttcctttttgaattctttgcaagaccatagcatgtatctaggactc 22445640  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  22445641 aatgtaaaggactatggacactataagtgatgt 22445673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 30956852 - 30956984
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||| ||||||||||||||||||||| ||||||||    
T  30956852 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattccttgcaagaccatagcatgtatttaggactc 30956951  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  30956952 aatgtaaaggactatggacactataagtgatgt 30956984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 32449625 - 32449562
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32449625 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 32449562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 571033 - 570908
Alignment:
Q  322 tattcatttctatgccaattggt-ttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    ||||||||||||| |||| |||  ||||||||| ||||| ||| ||||||   |||  |||| ||||||||||||||||||||| |||||||||||||||    
T  571033 tattcatttctataccaaatgggcttgtaataattttaggtagattagttcccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 570934  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  570933 aggactatggacactataagtgatgt 570908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 342 - 445
Target Start/End: Original strand, 15494607 - 15494711
Alignment:
Q  342 ggtttgtaataaatttagttagtttagtttagtttacattctt-gcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagt 440  Q
    |||||||||||| ||||| ||| ||||||   |||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15494607 ggtttgtaataattttaggtagattagttcccttttaattctttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagt 15494706  T
Q  441 gatgt 445  Q
    |||||    
T  15494707 gatgt 15494711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 24692990 - 24692856
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt---tagtttacattc-ttgcaagaccatagcatgtatctaggac 410  Q
    ||||| |||||||||||||   |||||| |||||||||| ||||| ||| ||||||   |  |||| |||| ||||||||||||||||||||| ||||||    
T  24692990 tttttctattcatttctatattaattgggtttgtaataattttagatagattagttcttttttttaaattccttgcaagaccatagcatgtatttaggac 24692891  T
Q  411 tcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||    
T  24692890 tcaatgtaaaggactatggacactataagtgatgt 24692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 30929969 - 30930101
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattc-ttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||  ||| ||||||   ||| | |||| ||||||||||||||||||||| ||||||||    
T  30929969 tttttttattcatttctatatcaattgggtttgtaataattttacatagattagttcctttttaaattccttgcaagaccatagcatgtatttaggactc 30930068  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  30930069 aatgtaaaggactatggacactataagtgatgt 30930101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 3943850 - 3943913
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3943850 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 3943913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 18083810 - 18083881
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  18083810 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 18083881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 20193810 - 20193747
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20193810 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 20193747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 25504343 - 25504272
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  25504343 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 25504272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 35871592 - 35871521
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35871592 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 35871521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 18061811 - 18061677
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt---tagtttacatt-cttgcaagaccatagcatgtatctaggac 410  Q
    ||||| |||||||||||||  || |||| |||||||||| ||||| ||| ||||||   |  |||| ||| |||||||||||||||||||||| |||||     
T  18061811 tttttttattcatttctatatcatttgggtttgtaataattttagatagattagttcctttttttaaattacttgcaagaccatagcatgtatttaggat 18061712  T
Q  411 tcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||    
T  18061711 tcaatgtaaaggactatggacactataagtgatgt 18061677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 30913231 - 30913168
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  30913231 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 30913168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 22347536 - 22347598
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22347536 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacattataagggatgt 22347598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 34497155 - 34497092
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  34497155 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactacggacactataagtgatgt 34497092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 11545786 - 11545842
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  11545786 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 11545842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 11559845 - 11559901
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  11559845 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 11559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 33772951 - 33773007
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  33772951 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 33773007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 33787903 - 33787959
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  33787903 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 33787959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 22988570 - 22988524
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  22988570 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 22988524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 23003637 - 23003591
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  23003637 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 23003591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 37650954 - 37651011
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaa-ggactatggacactataagtgatgt 445  Q
    |||||||||| |||||||||||||  |||||||| |||| ||||||||||||||||||||    
T  37650954 aagaccatagaatgtatctaggac--aatgtaaaaggaccatggacactataagtgatgt 37651011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 23430817 - 23430762
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||| |||||    
T  23430817 aagaccatagcatgtatctagga--caatgtaaaggactat-gacattataagggatgt 23430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 11545556 - 11545602
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttcttt 169  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||||||    
T  11545556 attctaggtgtatttttaccactttatttcatttcattactttcttt 11545602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 11559615 - 11559661
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttcttt 169  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||||||    
T  11559615 attctaggtgtatttttaccactttatttcatttcattactttcttt 11559661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 23887542 - 23887644
Alignment:
Q  302 tagtttaggttttctttttgtattcatttctatgccaattggt-ttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcat 399  Q
    |||||||||  || ||||| ||||||||||||| |||| |||  ||||||||| ||||| ||| |||||||  |||  ||| ||||||||||||||||||    
T  23887542 tagtttaggcattatttttctattcatttctataccaaatgggcttgtaataattttaggtagattagtttccttttgatttcttgcaagaccatagcat 23887641  T
Q  400 gta 402  Q
    |||    
T  23887642 gta 23887644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 23902185 - 23902287
Alignment:
Q  302 tagtttaggttttctttttgtattcatttctatgccaattggt-ttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcat 399  Q
    |||||||||  || ||||| ||||||||||||| |||| |||  ||||||||| ||||| ||| |||||||  |||  ||| ||||||||||||||||||    
T  23902185 tagtttaggcattatttttctattcatttctataccaaatgggcttgtaataattttaggtagattagtttccttttgatttcttgcaagaccatagcat 23902284  T
Q  400 gta 402  Q
    |||    
T  23902285 gta 23902287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 123 - 445
Target Start/End: Complemental strand, 20321803 - 20321479
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgcannnnnnnnnnc--tattatca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |             ||||||||    
T  20321803 attctaggtgtatttttactactttgtttcattgcattattttctttctcttgtgctattcaattctatattgcttgtatctttttttttattattatca 20321704  T
Q  221 ttttgtacttgtgttactaactcttatgcttcatatctcactcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttcttttt 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20321703 ttttgtacttgtgttactaactcttatgcttcatatctcattcattccataagcacctaatctttgtaccctcattgctcctagtttaggttttattttt 20321604  T
Q  321 gtattcatttctatgccaattggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaatgtaaa 420  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20321603 gtattcatttctatgccaactggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcgatgtaaa 20321504  T
Q  421 ggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||    
T  20321503 ggactatggacactataagtgatgt 20321479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 9072749 - 9072858
Alignment:
Q  18 caatgggcactattgcttcactcttatgggattttcagagagtaataattgtggtaaagatccaccatttgaacnnnnnnnatctcttcattacaaattt 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||    
T  9072749 caatgtgcactattgcttcactcttatgggattttcagagagtaataattgtggtaaagatccaccatttgaactttttttatctcttcgttacaaattt 9072848  T
Q  118 ttagtattct 127  Q
    ||||||||||    
T  9072849 ttagtattct 9072858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 18293441 - 18293574
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||| |||||||    
T  18293441 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatttaggact 18293540  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  18293541 caatgtaaaggactatggacactataagtgatgt 18293574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 18289047 - 18289171
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||||||| |||||||||| ||||| ||| |||||||  |||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  18289047 tattcatttctatatcaattgggtttgtaataattttagatagattagtttt-tttaaattccttgcaagaccatagcatgtatttaggtctcaatgtaa 18289145  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  18289146 aggactatggacactataagtgatgt 18289171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 21481417 - 21481549
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||||||    
T  21481417 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggactc 21481516  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  21481517 aatgtaaaggactatggacactataagtgatgt 21481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 18598026 - 18598097
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  18598026 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 18598097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 24654777 - 24654840
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24654777 cttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 24654840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 21645507 - 21645447
Alignment:
Q  385 gcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21645507 gcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagtgatgt 21645447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 47662979 - 47662933
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  47662979 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 47662933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 21505718 - 21505774
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||| ||||| |||||||  ||||||||||||||||||||||||||| |||||    
T  21505718 aagaccgtagaatgtaactaggac--aatgtaaaggactatggacactataagggatgt 21505774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 5418 - 5288
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5418 tttttctattcatttctatatcaattgggtttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 5319  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||    
T  5318 tgtaaaggactatggacactataagtgatgt 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 39885445 - 39885574
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39885445 tttttctattcatttctatatcaattgggtttgtaataaatt-agttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 39885543  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||    
T  39885544 tgtaaaggactatggacactataagtgatgt 39885574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 39901021 - 39901150
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 414  Q
    ||||| |||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39901021 tttttctattcatttctatatcaattgggtttgtaataaatt-agttagtttagtttagtttacattcttgcaagaccatagcatgtatctaggactcaa 39901119  T
Q  415 tgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||    
T  39901120 tgtaaaggactatggacactataagtgatgt 39901150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 13064949 - 13065080
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactca 413  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| |||||||||    
T  13064949 tttttctattcatttctatatcaaatgggtttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttaggactca 13065048  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||    
T  13065049 atgtaaaggactatggacactataagtgatgt 13065080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 445
Target Start/End: Complemental strand, 37870538 - 37870434
Alignment:
Q  342 ggtttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagt 440  Q
    |||||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37870538 ggtttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagt 37870439  T
Q  441 gatgt 445  Q
    |||||    
T  37870438 gatgt 37870434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 39757308 - 39757440
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||||||||||||||||||||    
T  39757308 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatagcatgtatctaggactc 39757407  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||| |||||    
T  39757408 aatgtaaaggactatggacactataagggatgt 39757440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 17632444 - 17632507
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17632444 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 17632507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 24045153 - 24045284
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcatgtatctaggactca 413  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||||   |||  ||| |||||||||||||||||||||| |||||||||    
T  24045153 tttttctattcatttctatatcaaatgggtttgtaataattttaggtagattagttcccttttaattccttgcaagaccatagcatgtatttaggactca 24045252  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||    
T  24045253 atgtaaaggactatggacactataagtgatgt 24045284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 12650866 - 12650999
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||| |||||||    
T  12650866 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatttaggact 12650965  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||| |||||    
T  12650966 caatgtaaaggactatggacactataagggatgt 12650999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 12665787 - 12665920
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||| |||||||    
T  12665787 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatttaggact 12665886  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||| |||||    
T  12665887 caatgtaaaggactatggacactataagggatgt 12665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 445
Target Start/End: Complemental strand, 28269663 - 28269529
Alignment:
Q  314 tctttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggac 410  Q
    ||||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||| ||| |||||     
T  28269663 tctttttttattcatttctatatcaattgggtttgtaataattttagataggttagttccttttttaattccttgcaagaccatagcatatatttaggat 28269564  T
Q  411 tcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||    
T  28269563 tcaatgtaaaggactatggacactataagtgatgt 28269529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 379 - 445
Target Start/End: Original strand, 27687793 - 27687859
Alignment:
Q  379 attcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  27687793 attcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 27687859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 26265848 - 26265777
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  26265848 tttaaattcttgcaagaccataacatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 26265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 26620518 - 26620447
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  26620518 tttaaattcttgcaagactatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 26620447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 32236819 - 32236748
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  32236819 tttaaattcttgcaagactatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 32236748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 34306491 - 34306428
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  34306491 cttgcaagaccatagcatgtatctaggactcgatgtaaaggactatggacgctataagtgatgt 34306428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 40794884 - 40794947
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  40794884 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 40794947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 27424329 - 27424204
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||| |  |||  |||| |||||||| |||| ||||||| |||||||||||||||    
T  27424329 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtctccttttaattccttgcaagaacataccatgtatttaggactcaatgtaa 27424230  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  27424229 aggactatggacactataagtgatgt 27424204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 27439373 - 27439248
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||| |  |||  |||| |||||||| |||| ||||||| |||||||||||||||    
T  27439373 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtctccttttaattccttgcaagaacataccatgtatttaggactcaatgtaa 27439274  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  27439273 aggactatggacactataagtgatgt 27439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 34263692 - 34263629
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  34263692 cttgaaagaccatagcatgtatctaggactcgatgtaaaggactatggacgctataagtgatgt 34263629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 28877595 - 28877657
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  28877595 ttgcaagaccatagcatgtatctaggactcaatgtaagggactatggacattataagggatgt 28877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 28892805 - 28892867
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  28892805 ttgcaagaccatagcatgtatctaggactcaatgtaagggactatggacattataagggatgt 28892867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 431
Target Start/End: Original strand, 20831452 - 20831542
Alignment:
Q  342 ggtttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||| ||||| ||| ||||| |  |||  |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20831452 ggtttgtaataattttaggtagattagtctccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaaaggacaatggac 20831542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 23121413 - 23121469
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  23121413 aagaccatagcatgtatctaggac--aatgtaaaggactatggacattataagggatgt 23121469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 4727405 - 4727359
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  4727405 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 4727359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 5391971 - 5391929
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  5391971 aagaccatagcatgtatctagga--caatgtaaaggactatggac 5391929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 15713616 - 15713570
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  15713616 ttgcaagaccatagaatgtatctagga--caatgtaaaggactatggac 15713570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 5392202 - 5392135
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcatta--ttttctttctcttgtgctattcaattc 188  Q
    ||||||||||||||||||| ||||| ||||||| |||||  |||| |||||||  |||||||| ||||    
T  5392202 attctaggtgtatttttaccactttatttcatttcattactttttttttctctcttgctattctattc 5392135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 11701 - 11568
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattc-ttgcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  |||| |||| ||||||||||||||||||||| |||||||    
T  11701 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaattccttgcaagaccatagcatgtatttaggact 11602  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  11601 caatgtaaaggactatggacactataagtgatgt 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 51851 - 51788
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51851 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 51788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 18148 - 18273
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| |||||||  |||  ||| ||||||||||||||||||||||||||||||| ||||||    
T  18148 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtttccttttaatttcttgcaagaccatagcatgtatctaggactcgatgtaa 18247  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  18248 aggactatggacactataagtgatgt 18273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 17009338 - 17009470
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttaca-ttctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | ||||| ||||||||||||||||||||||||||||    
T  17009338 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttgaattctttgcaagaccatagcatgtatctaggactc 17009437  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  17009438 aatgtaaaggactatggacactataagtgatgt 17009470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 17023303 - 17023435
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttaca-ttctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||  | ||||| ||||||||||||||||||||||||||||    
T  17023303 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttgaattctttgcaagaccatagcatgtatctaggactc 17023402  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  17023403 aatgtaaaggactatggacactataagtgatgt 17023435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 445
Target Start/End: Complemental strand, 18027902 - 18027798
Alignment:
Q  342 ggtttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagt 440  Q
    |||||||||||| ||||| ||| |||||||  |||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18027902 ggtttgtaataattttaggtagattagtttccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagt 18027803  T
Q  441 gatgt 445  Q
    |||||    
T  18027802 gatgt 18027798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 40562872 - 40563003
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcatgtatctaggactca 413  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||||   |||  ||| |||||||||||||||||||||| |||||||||    
T  40562872 tttttctattcatttctatatcaaatgggtttgtaataattttaggtagattagttcccttttaattccttgcaagaccatagcatgtatttaggactca 40562971  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||    
T  40562972 atgtaaaggactatggacactataagtgatgt 40563003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 14656980 - 14657113
Alignment:
Q  316 tttttgtattcatttctatg-ccaattggtttgtaataaatttagttagtttagtt--tagtttacattctt-gcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||| |||||||||||| ||||| ||| ||||||  |  |||| |||| | ||||||||||||||||||| |||||||    
T  14656980 tttttttattcatttctatatccaataggtttgtaataattttagatagattagttccttttttaaattcctcgcaagaccatagcatgtatttaggact 14657079  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  14657080 caatgtaaaggactatggacactataagtgatgt 14657113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 14675414 - 14675547
Alignment:
Q  316 tttttgtattcatttctatg-ccaattggtttgtaataaatttagttagtttagtt--tagtttacattctt-gcaagaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||| |||||||||||| ||||| ||| ||||||  |  |||| |||| | ||||||||||||||||||| |||||||    
T  14675414 tttttttattcatttctatatccaataggtttgtaataattttagatagattagttccttttttaaattcctcgcaagaccatagcatgtatttaggact 14675513  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||||    
T  14675514 caatgtaaaggactatggacactataagtgatgt 14675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 9247985 - 9247860
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacatt-cttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    ||||||||||||   ||||||| |||||||||| ||||| ||| ||||||   |||  ||| |||||||||||||||||||||| |||||||||||||||    
T  9247985 tattcatttctacatcaattgggtttgtaataattttagatagattagttcctttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 9247886  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||    
T  9247885 aggactatggacactataagtgatgt 9247860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 19639774 - 19639642
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| ||||||||    
T  19639774 tttttctattcatttctatatcaaatgggtttgtaataattttagatagattagttccttttttaattccttgcaagaccatagcatgtatttaggactc 19639675  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||    
T  19639674 aatgtaaaggactatggacactataagtgatgt 19639642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 13440966 - 13441100
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt---acattc-ttgcaagaccatagcatgtatctaggac 410  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||   | |||| ||||||||||||||||||||| ||||||    
T  13440966 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttctttttttaaaattccttgcaagaccatagcatgtatttaggac 13441065  T
Q  411 tcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||    
T  13441066 tcaatgtaaaggactatggacactataagtgatgt 13441100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 20308723 - 20308855
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattctt-gcaagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | |||||| ||||||||||||||||||||||||||||    
T  20308723 tttttttattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttgcaagaccatagcatgtatctaggactc 20308822  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||| |||||| |||||    
T  20308823 aatgtaaaggactatggacattataagggatgt 20308855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 4865503 - 4865574
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  4865503 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 4865574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 6557506 - 6557435
Alignment:
Q  374 tttacattcttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  6557506 tttaaattcttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 6557435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 40464285 - 40464222
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  40464285 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 40464222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 14658887 - 14658824
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  14658887 cttgcatgaccatagcatgtatttaggactcaatgtaaaggactatggacactataagggatgt 14658824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 15196374 - 15196311
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||    
T  15196374 cttgcaagaccatagcatgtatttaggacttgatttaaaggactatggacactataagtgatgt 15196311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 34271735 - 34271798
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  34271735 cttgcaagaccataacatgtatttaggactcgatgtgaaggactatggacactataagtgatgt 34271798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 22111779 - 22111648
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttaca-ttctt-gcaa-gaccatagcatgtatctaggact 411  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   |||| | ||||| |||| ||||||||||||||||||||||     
T  22111779 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttccttttaaaattcttcgcaaagaccatagcatgtatctaggac- 22111681  T
Q  412 caatgtaaaggactatggacactataagtgatgt 445  Q
     |||||||||||||||||||| |||||| |||||    
T  22111680 -aatgtaaaggactatggacattataagggatgt 22111648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 24582315 - 24582249
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcatta-ttttctttctcttgtgctattcaattc 188  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||| |||||||  |||||||| ||||    
T  24582315 attctaggtgtatttttaccactttatttcatttcattacttttttttctctcttgctattctattc 24582249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 24597143 - 24597077
Alignment:
Q  123 attctaggtgtatttttactactttgtttcattgcatta-ttttctttctcttgtgctattcaattc 188  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||| |||||||  |||||||| ||||    
T  24597143 attctaggtgtatttttaccactttatttcatttcattacttttttttctctcttgctattctattc 24597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 5317201 - 5317247
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggac 431  Q
    |||| ||||||||| ||||||||||||  ||||||||||||||||||||    
T  5317201 ttgccagaccatagaatgtatctagga--caatgtaaaggactatggac 5317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 317 - 445
Target Start/End: Complemental strand, 20746 - 20615
Alignment:
Q  317 ttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggactca 413  Q
    |||| ||||||||||||   ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||||||| |||||||||    
T  20746 ttttctattcatttctacatcaattgggtttgtaataattttagatagattagttctttttttaattccttgcaagaccatagcatgtatttaggactca 20647  T
Q  414 atgtaaaggactatggacactataagtgatgt 445  Q
    ||||||||||||||||||||||||||||||||    
T  20646 atgtaaaggactatggacactataagtgatgt 20615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 445
Target Start/End: Complemental strand, 73020 - 72886
Alignment:
Q  314 tctttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtt--tagtttacattcttgcaagaccatagcatgtatctaggac 410  Q
    ||||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |  ||||  | |||||||||||||||||| ||| |||||     
T  73020 tctttttttattcatttctatatcaattgggtttgtaataattttagataggttagttccttttttaattccttgcaagaccatagcatatatttaggat 72921  T
Q  411 tcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||    
T  72920 tcaatgtaaaggactatggacactataagtgatgt 72886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1704 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1704
Description:

Target: scaffold1704; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 807 - 682
Alignment:
Q  322 tattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagtttacattc-ttgcaagaccatagcatgtatctaggactcaatgtaa 419  Q
    |||||||||||||  ||| ||| |||||||||| ||||| ||| ||||| |  |||  |||| ||||||||||||||||||||| |||||||||||||||    
T  807 tattcatttctatatcaaatgggtttgtaataattttaggtagattagtctccttttaattccttgcaagaccatagcatgtatttaggactcaatgtaa 708  T
Q  420 aggactatggacactataagtgatgt 445  Q
    ||||||||||||| ||||||||||||    
T  707 aggactatggacattataagtgatgt 682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 32146 - 32083
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  32146 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 32083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 166645 - 166708
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  166645 cttgcaagaccatagcatgtatttaggactcgatgtaaaggactatggacactataagtgatgt 166708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 11786 - 11848
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  11786 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacattataagggatgt 11848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1665 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold1665
Description:

Target: scaffold1665; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 188 - 131
Alignment:
Q  383 ttgcaagaccatagcatgtatctaggactcaatgtaaaggactatggacactataagt 440  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  188 ttgcaagaccatagcatgtatttaggactcaatgtaaaggactatggacactataagt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 13650 - 13518
Alignment:
Q  316 tttttgtattcatttctatgccaattgg-tttgtaataaatttagttagtttagtttagttt-acattcttg-caagaccatagcatgtatctaggactc 412  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||   ||| | ||||||  ||||||||||||||||||||||| |||    
T  13650 tttttctattcatttctatatcaattgggtttgtaataattttagatagattagttcctttttaaattctttacaagaccatagcatgtatctagggctc 13551  T
Q  413 aatgtaaaggactatggacactataagtgatgt 445  Q
    |||||||||||||||||||| |||||| |||||    
T  13550 aatgtaaaggactatggacattataagggatgt 13518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 9979 - 10019
Alignment:
Q  382 cttgcaagaccatagcatgtatctaggactcaatgtaaagg 422  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  9979 cttgcaagaccatagcatgtatttaggactcgatgtaaagg 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 4987 - 4930
Alignment:
Q  387 aagaccatagcatgtatctaggactcaatgtaaagg-actatggacactataagtgatgt 445  Q
    |||||||||| |||||||||||||  |||||||||| || ||||||||||||||||||||    
T  4987 aagaccatagaatgtatctaggac--aatgtaaagggaccatggacactataagtgatgt 4930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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