View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8968_low_16 (Length: 426)

Name: NF8968_low_16
Description: NF8968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8968_low_16
NF8968_low_16
[»] chr3 (11 HSPs)
chr3 (73-409)||(49987988-49988322)
chr3 (1-33)||(2796179-2796211)
chr3 (1-33)||(19741288-19741320)
chr3 (1-33)||(34142614-34142646)
chr3 (1-32)||(51994282-51994313)
chr3 (1-33)||(9294354-9294386)
chr3 (1-33)||(33689382-33689414)
chr3 (1-33)||(40033852-40033884)
chr3 (1-33)||(40758147-40758179)
chr3 (1-33)||(40758506-40758538)
chr3 (1-33)||(55052643-55052675)
[»] chr8 (23 HSPs)
chr8 (84-261)||(42301579-42301754)
chr8 (1-33)||(8316984-8317016)
chr8 (1-33)||(12198950-12198982)
chr8 (1-33)||(12443378-12443410)
chr8 (1-33)||(20385568-20385600)
chr8 (1-33)||(20386826-20386858)
chr8 (1-33)||(23663910-23663942)
chr8 (1-33)||(23698308-23698340)
chr8 (1-33)||(38956068-38956100)
chr8 (1-31)||(12272920-12272950)
chr8 (1-30)||(1425056-1425085)
chr8 (1-30)||(12273249-12273278)
chr8 (4-33)||(38955703-38955732)
chr8 (1-33)||(4995052-4995084)
chr8 (1-33)||(13186060-13186092)
chr8 (1-33)||(16388583-16388615)
chr8 (1-33)||(16388922-16388954)
chr8 (1-33)||(22915754-22915786)
chr8 (1-33)||(23698640-23698672)
chr8 (1-33)||(33357498-33357530)
chr8 (1-33)||(34685653-34685685)
chr8 (1-33)||(39071676-39071708)
chr8 (1-33)||(40318360-40318392)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-33)||(1769-1801)
scaffold0007 (1-33)||(2137-2169)
[»] chr7 (23 HSPs)
chr7 (1-33)||(6253836-6253868)
chr7 (1-33)||(6571013-6571045)
chr7 (1-33)||(17102020-17102052)
chr7 (1-33)||(17102385-17102417)
chr7 (1-33)||(22871673-22871705)
chr7 (1-33)||(27991739-27991771)
chr7 (1-33)||(32298777-32298809)
chr7 (1-32)||(6253472-6253503)
chr7 (1-32)||(32299101-32299132)
chr7 (1-30)||(27992104-27992133)
chr7 (1-33)||(5457303-5457335)
chr7 (1-33)||(10936190-10936222)
chr7 (1-33)||(17886886-17886918)
chr7 (1-33)||(18670259-18670291)
chr7 (1-33)||(19204489-19204521)
chr7 (1-33)||(24389181-24389213)
chr7 (1-33)||(27396991-27397023)
chr7 (1-33)||(28469010-28469042)
chr7 (1-33)||(28469404-28469436)
chr7 (1-33)||(37657233-37657265)
chr7 (1-33)||(40380080-40380112)
chr7 (1-33)||(42362450-42362482)
chr7 (1-33)||(45011000-45011032)
[»] chr6 (14 HSPs)
chr6 (1-33)||(681124-681156)
chr6 (1-33)||(17734196-17734228)
chr6 (1-33)||(30337449-30337481)
chr6 (1-33)||(30337814-30337846)
chr6 (3-33)||(679866-679896)
chr6 (1-33)||(3059652-3059684)
chr6 (1-33)||(12081032-12081064)
chr6 (1-33)||(13379878-13379910)
chr6 (1-33)||(20651010-20651042)
chr6 (1-33)||(21628109-21628141)
chr6 (1-33)||(26463179-26463211)
chr6 (1-33)||(30726155-30726187)
chr6 (1-33)||(33517930-33517962)
chr6 (1-33)||(33647347-33647379)
[»] chr5 (23 HSPs)
chr5 (1-33)||(3528873-3528905)
chr5 (1-33)||(3529238-3529270)
chr5 (1-33)||(11761749-11761781)
chr5 (1-33)||(11762113-11762145)
chr5 (1-33)||(24547521-24547553)
chr5 (1-33)||(27587148-27587180)
chr5 (1-33)||(27587511-27587543)
chr5 (1-33)||(28770869-28770901)
chr5 (1-33)||(5024019-5024051)
chr5 (1-33)||(5993889-5993921)
chr5 (1-33)||(6150454-6150486)
chr5 (1-33)||(6150816-6150848)
chr5 (1-33)||(14194423-14194455)
chr5 (1-33)||(16157251-16157283)
chr5 (1-33)||(17202795-17202827)
chr5 (1-33)||(18247472-18247504)
chr5 (1-33)||(20814531-20814563)
chr5 (1-33)||(20840533-20840565)
chr5 (1-33)||(24547177-24547209)
chr5 (1-33)||(27937055-27937087)
chr5 (1-33)||(28771234-28771266)
chr5 (1-33)||(32242637-32242669)
chr5 (1-33)||(39453695-39453727)
[»] chr4 (33 HSPs)
chr4 (1-33)||(5368947-5368979)
chr4 (1-33)||(7451834-7451866)
chr4 (1-33)||(7452199-7452231)
chr4 (1-33)||(10780713-10780745)
chr4 (1-33)||(10781880-10781912)
chr4 (1-33)||(10974322-10974354)
chr4 (1-33)||(13058037-13058069)
chr4 (1-33)||(23613309-23613341)
chr4 (1-33)||(23613674-23613706)
chr4 (1-33)||(24349674-24349706)
chr4 (1-33)||(24350828-24350860)
chr4 (1-33)||(24711111-24711143)
chr4 (1-33)||(24711476-24711508)
chr4 (1-33)||(48528485-48528517)
chr4 (1-33)||(50418668-50418700)
chr4 (1-33)||(50419033-50419065)
chr4 (2-33)||(44967435-44967466)
chr4 (1-32)||(49879208-49879239)
chr4 (1-31)||(44967071-44967101)
chr4 (1-30)||(37248601-37248630)
chr4 (5-33)||(13058382-13058410)
chr4 (1-33)||(14801736-14801768)
chr4 (1-33)||(17355925-17355957)
chr4 (1-33)||(18831349-18831381)
chr4 (1-33)||(18831713-18831745)
chr4 (1-33)||(34765776-34765808)
chr4 (1-33)||(35028394-35028426)
chr4 (1-33)||(36008844-36008876)
chr4 (1-33)||(36009210-36009242)
chr4 (1-33)||(46661310-46661342)
chr4 (1-33)||(51692915-51692947)
chr4 (1-33)||(54713616-54713648)
chr4 (1-33)||(55867510-55867542)
[»] chr2 (13 HSPs)
chr2 (1-33)||(11163419-11163451)
chr2 (1-33)||(16099420-16099452)
chr2 (1-33)||(39498675-39498707)
chr2 (1-33)||(45556112-45556144)
chr2 (2-33)||(6658244-6658275)
chr2 (4-33)||(6657878-6657907)
chr2 (1-33)||(3555250-3555282)
chr2 (1-33)||(16099055-16099087)
chr2 (1-33)||(36755484-36755516)
chr2 (1-33)||(39423911-39423943)
chr2 (1-33)||(44044114-44044146)
chr2 (1-33)||(44045398-44045430)
chr2 (1-33)||(45556443-45556475)
[»] chr1 (28 HSPs)
chr1 (1-33)||(25647884-25647916)
chr1 (1-33)||(26024788-26024820)
chr1 (1-33)||(47999123-47999155)
chr1 (1-33)||(183221-183253)
chr1 (1-33)||(183588-183620)
chr1 (1-33)||(6367562-6367594)
chr1 (1-33)||(7820954-7820986)
chr1 (1-33)||(17661852-17661884)
chr1 (1-33)||(19017629-19017661)
chr1 (1-33)||(19515819-19515851)
chr1 (1-33)||(23209723-23209755)
chr1 (1-33)||(24009575-24009607)
chr1 (1-33)||(26024423-26024455)
chr1 (1-33)||(30711327-30711359)
chr1 (1-33)||(30711723-30711755)
chr1 (1-33)||(34464449-34464481)
chr1 (1-33)||(34464845-34464877)
chr1 (1-33)||(34849011-34849043)
chr1 (1-33)||(34850461-34850493)
chr1 (1-33)||(35473631-35473663)
chr1 (1-33)||(36694282-36694314)
chr1 (1-33)||(36694644-36694676)
chr1 (1-33)||(36710383-36710415)
chr1 (1-33)||(36710745-36710777)
chr1 (1-33)||(40772855-40772887)
chr1 (1-33)||(43759218-43759250)
chr1 (1-33)||(47999488-47999520)
chr1 (1-33)||(48779515-48779547)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-30)||(139675-139704)
scaffold0020 (1-30)||(140037-140066)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1-33)||(6475-6507)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-33)||(68965-68997)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-33)||(37959-37991)


Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 73 - 409
Target Start/End: Original strand, 49987988 - 49988322
Alignment:
Q  73 tatatattatgtagataaaatttcactctccggaggaggaaatagcatttgcatctggttgctggttttataggtctatttactaagaagtggagcatat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  49987988 tatatattatgtagataaaatttcactctccggaggaggaaatagcatttgcatctggttgctggtt--ataggtctatttactaagaagtggagcatat 49988085  T
Q  173 gcttttatgctccctctttctggtggagtatacagttcatctgttgctgaaattgttgggtgtatgtgccagctggctgtgaaaggtaaacttgtgacag 272  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49988086 gcttttatgctccctctttctgatggagtatacagttcatctgttgctgaaattgttgggtgtatgtgccagctggctgtgaaaggtaaacttgtgacag 49988185  T
Q  273 tattttaaagctacatttacattattgtgcatacgatcataggagtgcttatttagggataaacaaattattcaagtaaccactaatcttgtttccgttt 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49988186 tattttaaagctacatttacattattgtgcatacgatcataggagtgcttatttagggataaacaaattattcaagtaaccactaatcttgtttccgttt 49988285  T
Q  373 agtatcatttgtgtaaagatctcaaaatagtaggttt 409  Q
    |||||||||||||||||||||||||||||||||||||    
T  49988286 agtatcatttgtgtaaagatctcaaaatagtaggttt 49988322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2796211 - 2796179
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  2796211 cctaattgcaaggatcaaatacatatttaagcc 2796179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19741288 - 19741320
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  19741288 cctaattgcaaggatcaaatacatatttaagcc 19741320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34142614 - 34142646
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  34142614 cctaattgcaaggatcaaatacatatttaagcc 34142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 51994282 - 51994313
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagc 32  Q
    ||||||||||||||||||||||||||||||||    
T  51994282 cctaattgcaaggatcaaatacatatttaagc 51994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9294354 - 9294386
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  9294354 cctaattgcaaggatgaaatacatatttaagcc 9294386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33689414 - 33689382
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  33689414 cctaattgcaaggatgaaatacatatttaagcc 33689382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40033852 - 40033884
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  40033852 cctaattgcaaggatgaaatacatatttaagcc 40033884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40758179 - 40758147
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  40758179 cctaattgcaaggatgaaatacatatttaagcc 40758147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40758506 - 40758538
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  40758506 cctaattgcaaggatgaaatacatatttaagcc 40758538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55052643 - 55052675
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  55052643 cctaattacaaggatcaaatacatatttaagcc 55052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 84 - 261
Target Start/End: Complemental strand, 42301754 - 42301579
Alignment:
Q  84 tagataaaatttcactctccggaggaggaaatagcatttgcatctggttgctggttttataggtctatttactaagaagtggagcatatgcttttatgct 183  Q
    |||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||  || || |||||||| |||||||||||||| || |||| ||||    
T  42301754 tagataaaatatcactctcccgaggaggaaatagcatttggacctggttgctggtt--atgggactatttacgaagaagtggagcatctggttttctgct 42301657  T
Q  184 ccctctttctggtggagtatacagttcatctgttgctgaaattgttgggtgtatgtgccagctggctgtgaaaggtaa 261  Q
    ||||||||||||||||| | ||||||| ||||||||||  |||||||| || ||||||||| ||| ||||||||||||    
T  42301656 ccctctttctggtggagcagacagttcctctgttgctgcgattgttggatgcatgtgccagatggttgtgaaaggtaa 42301579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8316984 - 8317016
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  8316984 cctaattgcaaggatcaaatacatatttaagcc 8317016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12198982 - 12198950
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  12198982 cctaattgcaaggatcaaatacatatttaagcc 12198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12443410 - 12443378
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  12443410 cctaattgcaaggatcaaatacatatttaagcc 12443378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20385600 - 20385568
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  20385600 cctaattgcaaggatcaaatacatatttaagcc 20385568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20386826 - 20386858
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  20386826 cctaattgcaaggatcaaatacatatttaagcc 20386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23663910 - 23663942
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  23663910 cctaattgcaaggatcaaatacatatttaagcc 23663942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23698340 - 23698308
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  23698340 cctaattgcaaggatcaaatacatatttaagcc 23698308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38956068 - 38956100
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  38956068 cctaattgcaaggatcaaatacatatttaagcc 38956100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 12272950 - 12272920
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaag 31  Q
    |||||||||||||||||||||||||||||||    
T  12272950 cctaattgcaaggatcaaatacatatttaag 12272920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 1425085 - 1425056
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaa 30  Q
    ||||||||||||||||||||||||||||||    
T  1425085 cctaattgcaaggatcaaatacatatttaa 1425056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12273249 - 12273278
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaa 30  Q
    ||||||||||||||||||||||||||||||    
T  12273249 cctaattgcaaggatcaaatacatatttaa 12273278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 38955732 - 38955703
Alignment:
Q  4 aattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||||||||||||||||||    
T  38955732 aattgcaaggatcaaatacatatttaagcc 38955703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4995052 - 4995084
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  4995052 cctaattgcaaggatgaaatacatatttaagcc 4995084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13186092 - 13186060
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  13186092 cctaattgcaaggatgaaatacatatttaagcc 13186060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16388615 - 16388583
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  16388615 cctaattgcaaggatgaaatacatatttaagcc 16388583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16388922 - 16388954
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  16388922 cctaattgcaaggatgaaatacatatttaagcc 16388954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22915754 - 22915786
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||| ||||||||||||||||||||||||||||    
T  22915754 cctagttgcaaggatcaaatacatatttaagcc 22915786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23698640 - 23698672
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  23698640 cctaattacaaggatcaaatacatatttaagcc 23698672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33357530 - 33357498
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  33357530 cctaattgcaaggatgaaatacatatttaagcc 33357498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34685653 - 34685685
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  34685653 cctaattgcaaggataaaatacatatttaagcc 34685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39071708 - 39071676
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  39071708 cctaattgcaaggatgaaatacatatttaagcc 39071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40318360 - 40318392
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  40318360 cctaattgcaaggatgaaatacatatttaagcc 40318392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1801 - 1769
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  1801 cctaattgcaaggatcaaatacatatttaagcc 1769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2137 - 2169
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  2137 cctaattgcaaggatcaaatacatatttaagcc 2169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6253836 - 6253868
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  6253836 cctaattgcaaggatcaaatacatatttaagcc 6253868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6571045 - 6571013
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  6571045 cctaattgcaaggatcaaatacatatttaagcc 6571013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17102052 - 17102020
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  17102052 cctaattgcaaggatcaaatacatatttaagcc 17102020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17102385 - 17102417
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  17102385 cctaattgcaaggatcaaatacatatttaagcc 17102417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22871673 - 22871705
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  22871673 cctaattgcaaggatcaaatacatatttaagcc 22871705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27991771 - 27991739
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  27991771 cctaattgcaaggatcaaatacatatttaagcc 27991739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32298809 - 32298777
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  32298809 cctaattgcaaggatcaaatacatatttaagcc 32298777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6253503 - 6253472
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagc 32  Q
    ||||||||||||||||||||||||||||||||    
T  6253503 cctaattgcaaggatcaaatacatatttaagc 6253472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32299101 - 32299132
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagc 32  Q
    ||||||||||||||||||||||||||||||||    
T  32299101 cctaattgcaaggatcaaatacatatttaagc 32299132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 27992104 - 27992133
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaa 30  Q
    ||||||||||||||||||||||||||||||    
T  27992104 cctaattgcaaggatcaaatacatatttaa 27992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5457303 - 5457335
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  5457303 cctaattgcaaggatgaaatacatatttaagcc 5457335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10936190 - 10936222
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  10936190 cctaattgcaaggatgaaatacatatttaagcc 10936222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17886886 - 17886918
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  17886886 cctaattgcaaggatgaaatacatatttaagcc 17886918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18670259 - 18670291
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  18670259 cctaattgcaaggattaaatacatatttaagcc 18670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19204521 - 19204489
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  19204521 cctaatttcaaggatcaaatacatatttaagcc 19204489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24389181 - 24389213
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  24389181 cctaattgcaaggatgaaatacatatttaagcc 24389213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27396991 - 27397023
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  27396991 cctaattgcaaggatgaaatacatatttaagcc 27397023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28469042 - 28469010
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  28469042 cctaattgcaaggatgaaatacatatttaagcc 28469010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28469404 - 28469436
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  28469404 cctaattgcaaggatgaaatacatatttaagcc 28469436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37657233 - 37657265
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  37657233 cctaattgcaaggatgaaatacatatttaagcc 37657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40380080 - 40380112
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  40380080 cctaattgcaaggatgaaatacatatttaagcc 40380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42362482 - 42362450
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  42362482 cctaattgcaaggatgaaatacatatttaagcc 42362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45011000 - 45011032
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  45011000 cctaattgcaaggatgaaatacatatttaagcc 45011032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 681124 - 681156
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  681124 cctaattgcaaggatcaaatacatatttaagcc 681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17734228 - 17734196
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  17734228 cctaattgcaaggatcaaatacatatttaagcc 17734196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30337481 - 30337449
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  30337481 cctaattgcaaggatcaaatacatatttaagcc 30337449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30337814 - 30337846
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  30337814 cctaattgcaaggatcaaatacatatttaagcc 30337846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 679896 - 679866
Alignment:
Q  3 taattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  679896 taattgcaaggatcaaatacatatttaagcc 679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3059652 - 3059684
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  3059652 cctaattgcaaggatgaaatacatatttaagcc 3059684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12081032 - 12081064
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  12081032 cctaattgcaaggatgaaatacatatttaagcc 12081064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13379878 - 13379910
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  13379878 cctaattgcagggatcaaatacatatttaagcc 13379910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20651042 - 20651010
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  20651042 cctaattgcagggatcaaatacatatttaagcc 20651010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 21628109 - 21628141
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  21628109 cctaattgcaaggatgaaatacatatttaagcc 21628141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26463211 - 26463179
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  26463211 cctaattgcagggatcaaatacatatttaagcc 26463179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30726155 - 30726187
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  30726155 cctaattgcaaggatgaaatacatatttaagcc 30726187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33517930 - 33517962
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  33517930 cctaattgcaaggatgaaatacatatttaagcc 33517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33647347 - 33647379
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  33647347 cctaattgcaaggatgaaatacatatttaagcc 33647379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3528905 - 3528873
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  3528905 cctaattgcaaggatcaaatacatatttaagcc 3528873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3529238 - 3529270
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  3529238 cctaattgcaaggatcaaatacatatttaagcc 3529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11761781 - 11761749
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  11761781 cctaattgcaaggatcaaatacatatttaagcc 11761749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11762113 - 11762145
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  11762113 cctaattgcaaggatcaaatacatatttaagcc 11762145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24547521 - 24547553
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  24547521 cctaattgcaaggatcaaatacatatttaagcc 24547553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27587180 - 27587148
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  27587180 cctaattgcaaggatcaaatacatatttaagcc 27587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27587511 - 27587543
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  27587511 cctaattgcaaggatcaaatacatatttaagcc 27587543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28770901 - 28770869
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  28770901 cctaattgcaaggatcaaatacatatttaagcc 28770869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5024051 - 5024019
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  5024051 cctaattgcaaggatgaaatacatatttaagcc 5024019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5993921 - 5993889
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  5993921 cctaattgcaaggatgaaatacatatttaagcc 5993889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6150486 - 6150454
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  6150486 cctaattgcaaggatgaaatacatatttaagcc 6150454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6150816 - 6150848
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  6150816 cctaattgcaaggatgaaatacatatttaagcc 6150848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14194455 - 14194423
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  14194455 cctaattgcaaggatgaaatacatatttaagcc 14194423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16157251 - 16157283
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  16157251 cctaattgcaaggatgaaatacatatttaagcc 16157283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17202795 - 17202827
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  17202795 cctaattgcaaggatgaaatacatatttaagcc 17202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18247472 - 18247504
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  18247472 cctaattgcaaggatgaaatacatatttaagcc 18247504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20814531 - 20814563
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  20814531 cctaattgcaaggatgaaatacatatttaagcc 20814563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20840565 - 20840533
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  20840565 cctaattgcaaggatgaaatacatatttaagcc 20840533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24547209 - 24547177
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||| ||||||||||||||    
T  24547209 cctaattgcaaggatcaagtacatatttaagcc 24547177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27937087 - 27937055
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  27937087 cctaattgcaaggatgaaatacatatttaagcc 27937055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28771234 - 28771266
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  28771234 cctaattacaaggatcaaatacatatttaagcc 28771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32242637 - 32242669
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  32242637 cctaattgcaaggatgaaatacatatttaagcc 32242669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39453695 - 39453727
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  39453695 cctaattgcaaggatgaaatacatatttaagcc 39453727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5368979 - 5368947
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  5368979 cctaattgcaaggatcaaatacatatttaagcc 5368947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7451866 - 7451834
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  7451866 cctaattgcaaggatcaaatacatatttaagcc 7451834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7452199 - 7452231
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  7452199 cctaattgcaaggatcaaatacatatttaagcc 7452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10780745 - 10780713
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  10780745 cctaattgcaaggatcaaatacatatttaagcc 10780713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10781880 - 10781912
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  10781880 cctaattgcaaggatcaaatacatatttaagcc 10781912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10974354 - 10974322
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  10974354 cctaattgcaaggatcaaatacatatttaagcc 10974322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13058069 - 13058037
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  13058069 cctaattgcaaggatcaaatacatatttaagcc 13058037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23613341 - 23613309
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  23613341 cctaattgcaaggatcaaatacatatttaagcc 23613309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23613674 - 23613706
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  23613674 cctaattgcaaggatcaaatacatatttaagcc 23613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24349706 - 24349674
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  24349706 cctaattgcaaggatcaaatacatatttaagcc 24349674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24350828 - 24350860
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  24350828 cctaattgcaaggatcaaatacatatttaagcc 24350860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24711143 - 24711111
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  24711143 cctaattgcaaggatcaaatacatatttaagcc 24711111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24711476 - 24711508
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  24711476 cctaattgcaaggatcaaatacatatttaagcc 24711508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48528517 - 48528485
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  48528517 cctaattgcaaggatcaaatacatatttaagcc 48528485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 50418700 - 50418668
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  50418700 cctaattgcaaggatcaaatacatatttaagcc 50418668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 50419033 - 50419065
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  50419033 cctaattgcaaggatcaaatacatatttaagcc 50419065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 44967435 - 44967466
Alignment:
Q  2 ctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  44967435 ctaattgcaaggatcaaatacatatttaagcc 44967466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 49879239 - 49879208
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagc 32  Q
    ||||||||||||||||||||||||||||||||    
T  49879239 cctaattgcaaggatcaaatacatatttaagc 49879208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 44967101 - 44967071
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaag 31  Q
    |||||||||||||||||||||||||||||||    
T  44967101 cctaattgcaaggatcaaatacatatttaag 44967071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 37248601 - 37248630
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaa 30  Q
    ||||||||||||||||||||||||||||||    
T  37248601 cctaattgcaaggatcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 13058382 - 13058410
Alignment:
Q  5 attgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||    
T  13058382 attgcaaggatcaaatacatatttaagcc 13058410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14801768 - 14801736
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  14801768 cctaattgcaaggatgaaatacatatttaagcc 14801736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17355957 - 17355925
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  17355957 cctaattgcaaggatgaaatacatatttaagcc 17355925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18831381 - 18831349
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||| ||||||||||||||||||||||||    
T  18831381 cctaattgtaaggatcaaatacatatttaagcc 18831349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18831713 - 18831745
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  18831713 cctaattgcaaggatgaaatacatatttaagcc 18831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34765776 - 34765808
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  34765776 cctaattgcaaggataaaatacatatttaagcc 34765808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35028394 - 35028426
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  35028394 cctaattgcaaggatgaaatacatatttaagcc 35028426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36008876 - 36008844
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  36008876 cctaattacaaggatcaaatacatatttaagcc 36008844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36009210 - 36009242
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  36009210 cctaattacaaggatcaaatacatatttaagcc 36009242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46661310 - 46661342
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  46661310 cctaattgcaaggatgaaatacatatttaagcc 46661342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51692915 - 51692947
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  51692915 cctaattgcaaggatgaaatacatatttaagcc 51692947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 54713648 - 54713616
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  54713648 cctaattgcaaggatgaaatacatatttaagcc 54713616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55867510 - 55867542
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  55867510 cctaattgcagggatcaaatacatatttaagcc 55867542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11163419 - 11163451
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  11163419 cctaattgcaaggatcaaatacatatttaagcc 11163451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16099420 - 16099452
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  16099420 cctaattgcaaggatcaaatacatatttaagcc 16099452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39498675 - 39498707
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  39498675 cctaattgcaaggatcaaatacatatttaagcc 39498707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45556144 - 45556112
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  45556144 cctaattgcaaggatcaaatacatatttaagcc 45556112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 6658244 - 6658275
Alignment:
Q  2 ctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  6658244 ctaattgcaaggatcaaatacatatttaagcc 6658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 6657907 - 6657878
Alignment:
Q  4 aattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||||||||||||||||||    
T  6657907 aattgcaaggatcaaatacatatttaagcc 6657878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3555282 - 3555250
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  3555282 cctaattgcaaggatgaaatacatatttaagcc 3555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16099087 - 16099055
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  16099087 cctaattgcaagaatcaaatacatatttaagcc 16099055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36755484 - 36755516
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  36755484 cctaattgcaaggatgaaatacatatttaagcc 36755516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39423911 - 39423943
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  39423911 cctaattgcaaggatgaaatacatatttaagcc 39423943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44044146 - 44044114
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  44044146 cctaattgcagggatcaaatacatatttaagcc 44044114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44045398 - 44045430
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  44045398 cctaattgcagggatcaaatacatatttaagcc 44045430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45556443 - 45556475
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  45556443 cctaattacaaggatcaaatacatatttaagcc 45556475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25647916 - 25647884
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  25647916 cctaattgcaaggatcaaatacatatttaagcc 25647884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26024788 - 26024820
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  26024788 cctaattgcaaggatcaaatacatatttaagcc 26024820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 47999155 - 47999123
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  47999155 cctaattgcaaggatcaaatacatatttaagcc 47999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 183253 - 183221
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||| ||||||||||||||||||||||||    
T  183253 cctaattgtaaggatcaaatacatatttaagcc 183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 183588 - 183620
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  183588 cctaattacaaggatcaaatacatatttaagcc 183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6367594 - 6367562
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  6367594 cctaattgcaaggatgaaatacatatttaagcc 6367562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7820986 - 7820954
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  7820986 cctaattgcaaggatgaaatacatatttaagcc 7820954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17661884 - 17661852
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  17661884 cctaattgcaaggatgaaatacatatttaagcc 17661852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19017661 - 19017629
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  19017661 cctaattgcaaggatgaaatacatatttaagcc 19017629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19515851 - 19515819
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  19515851 cctaattgcaaggatgaaatacatatttaagcc 19515819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23209723 - 23209755
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  23209723 cctaattgcaaggatgaaatacatatttaagcc 23209755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24009607 - 24009575
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  24009607 cctaattgcaaggatgaaatacatatttaagcc 24009575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26024455 - 26024423
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  26024455 cctaattgcaagaatcaaatacatatttaagcc 26024423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30711359 - 30711327
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  30711359 cctaattgcaaggatgaaatacatatttaagcc 30711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30711723 - 30711755
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  30711723 cctaattgcaaggatgaaatacatatttaagcc 30711755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34464481 - 34464449
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  34464481 cctaattgcaaggatgaaatacatatttaagcc 34464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34464845 - 34464877
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  34464845 cctaattgcaaggatgaaatacatatttaagcc 34464877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34849043 - 34849011
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  34849043 cctaattgcaaggattaaatacatatttaagcc 34849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34850461 - 34850493
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  34850461 cctaattgcaaggattaaatacatatttaagcc 34850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35473663 - 35473631
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  35473663 cctaattgcaaggattaaatacatatttaagcc 35473631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36694314 - 36694282
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  36694314 cctaattgcaaggatgaaatacatatttaagcc 36694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36694644 - 36694676
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  36694644 cctaattgcaaggatgaaatacatatttaagcc 36694676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36710415 - 36710383
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  36710415 cctaattgcaaggatgaaatacatatttaagcc 36710383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36710745 - 36710777
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  36710745 cctaattgcaaggatgaaatacatatttaagcc 36710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40772855 - 40772887
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  40772855 cctaattgcaaggatgaaatacatatttaagcc 40772887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43759218 - 43759250
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  43759218 cctaattgcaaggatgaaatacatatttaagcc 43759250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47999488 - 47999520
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||| |||||||||||||||||||||||||    
T  47999488 cctaattacaaggatcaaatacatatttaagcc 47999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 48779515 - 48779547
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  48779515 cctaattgcaaggatgaaatacatatttaagcc 48779547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 139704 - 139675
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaa 30  Q
    ||||||||||||||||||||||||||||||    
T  139704 cctaattgcaaggatcaaatacatatttaa 139675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 140037 - 140066
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaa 30  Q
    ||||||||||||||||||||||||||||||    
T  140037 cctaattgcaaggatcaaatacatatttaa 140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6475 - 6507
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  6475 cctaattgcaaggatgaaatacatatttaagcc 6507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 68997 - 68965
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  68997 cctaattgcaaggatgaaatacatatttaagcc 68965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37959 - 37991
Alignment:
Q  1 cctaattgcaaggatcaaatacatatttaagcc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  37959 cctaattgcaaggatgaaatacatatttaagcc 37991  T

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