View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8968_low_37 (Length: 210)
Name: NF8968_low_37
Description: NF8968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8968_low_37 |
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Alignment Details
Target: chr3 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 32605734 - 32605552
Alignment:
| Q |
11 |
agcacagaggaaccaaattgcttgcgtcatgacaaagcactaaacgtaaattccatttgatggtcaacgaaatcaaaacatctcctacttcccataaatt |
110 |
Q |
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| T |
32605734 |
agcacaaaggaacaaaattgcttgcgtcatgacaaagcactaaacgtaaattccatttgatggtcaacgaaatc-aaacatctcctacttcccataaatt |
32605636 |
T |
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| Q |
111 |
aagcaaacacaaaataaagtgaaattacaat---agtacaataaattttatttttatatagagatgcatataatatcttcctca |
191 |
Q |
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| T |
32605635 |
aagcaaacacaaaataaagtgaaattacaataagagtacaataaattttatttttatatagagatgcatataatatcttcctca |
32605552 |
T |
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