View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8969_low_34 (Length: 387)

Name: NF8969_low_34
Description: NF8969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8969_low_34
NF8969_low_34
[»] chr1 (40 HSPs)
chr1 (1-162)||(4929817-4929978)
chr1 (180-223)||(19620577-19620620)
chr1 (180-223)||(21400040-21400083)
chr1 (180-223)||(25532974-25533017)
chr1 (180-223)||(27533244-27533287)
chr1 (177-223)||(34142381-34142427)
chr1 (180-221)||(8741477-8741518)
chr1 (180-223)||(2889943-2889986)
chr1 (180-223)||(8148382-8148425)
chr1 (180-223)||(8253740-8253783)
chr1 (184-223)||(8269385-8269424)
chr1 (180-223)||(12213994-12214037)
chr1 (180-223)||(13054874-13054917)
chr1 (180-223)||(15595729-15595772)
chr1 (180-223)||(15803254-15803297)
chr1 (180-223)||(17139534-17139577)
chr1 (180-223)||(17283952-17283995)
chr1 (180-223)||(34733401-34733444)
chr1 (180-223)||(37098498-37098541)
chr1 (180-223)||(38448883-38448926)
chr1 (180-219)||(41677611-41677650)
chr1 (180-223)||(42045389-42045432)
chr1 (180-219)||(43426181-43426220)
chr1 (180-223)||(45140023-45140066)
chr1 (184-223)||(45190286-45190325)
chr1 (180-223)||(47070849-47070892)
chr1 (180-223)||(49183174-49183217)
chr1 (185-219)||(7652107-7652141)
chr1 (128-162)||(10920140-10920174)
chr1 (128-162)||(14389736-14389770)
chr1 (177-223)||(15854105-15854151)
chr1 (184-218)||(17201228-17201262)
chr1 (180-222)||(30279638-30279680)
chr1 (185-222)||(1072542-1072579)
chr1 (190-219)||(9005690-9005719)
chr1 (182-223)||(50638933-50638974)
chr1 (180-223)||(3481561-3481605)
chr1 (179-223)||(13234078-13234122)
chr1 (182-226)||(46707875-46707919)
chr1 (180-228)||(51503680-51503728)
[»] chr8 (31 HSPs)
chr8 (1-162)||(45107291-45107451)
chr8 (180-223)||(11708987-11709030)
chr8 (180-223)||(39821885-39821928)
chr8 (183-223)||(43962041-43962081)
chr8 (180-223)||(10601764-10601807)
chr8 (180-223)||(11621176-11621219)
chr8 (180-223)||(15079169-15079212)
chr8 (180-223)||(15572152-15572195)
chr8 (180-223)||(17704014-17704057)
chr8 (180-223)||(19778066-19778109)
chr8 (180-223)||(30427732-30427775)
chr8 (180-223)||(30623294-30623337)
chr8 (180-223)||(37015853-37015896)
chr8 (185-223)||(6446923-6446961)
chr8 (177-223)||(8881273-8881319)
chr8 (177-223)||(9656014-9656060)
chr8 (189-223)||(12800917-12800951)
chr8 (180-226)||(13575290-13575336)
chr8 (180-222)||(32223897-32223939)
chr8 (180-222)||(36781409-36781451)
chr8 (177-223)||(45396563-45396608)
chr8 (190-223)||(7553690-7553723)
chr8 (182-223)||(11771710-11771751)
chr8 (182-223)||(12674882-12674922)
chr8 (180-221)||(13059202-13059243)
chr8 (190-223)||(13105105-13105138)
chr8 (180-221)||(18942919-18942960)
chr8 (190-223)||(29908022-29908055)
chr8 (177-222)||(43330273-43330318)
chr8 (180-228)||(12910818-12910866)
chr8 (184-219)||(40423601-40423637)
[»] chr5 (36 HSPs)
chr5 (1-162)||(38487558-38487718)
chr5 (180-228)||(15889412-15889460)
chr5 (180-223)||(6489008-6489051)
chr5 (180-223)||(16752519-16752562)
chr5 (180-223)||(20927640-20927683)
chr5 (180-223)||(34436852-34436895)
chr5 (177-223)||(1082236-1082282)
chr5 (180-222)||(5485187-5485229)
chr5 (180-222)||(14188353-14188395)
chr5 (128-162)||(22778254-22778288)
chr5 (180-223)||(11720895-11720938)
chr5 (180-223)||(16133082-16133125)
chr5 (180-223)||(16531292-16531335)
chr5 (180-223)||(16701598-16701641)
chr5 (180-223)||(17210726-17210769)
chr5 (180-223)||(20211281-20211324)
chr5 (180-223)||(33654749-33654792)
chr5 (180-223)||(36321511-36321554)
chr5 (180-223)||(37932331-37932374)
chr5 (180-223)||(38353775-38353818)
chr5 (180-222)||(4573077-4573119)
chr5 (180-222)||(6375524-6375566)
chr5 (181-223)||(8024403-8024445)
chr5 (181-223)||(16036829-16036871)
chr5 (180-222)||(17861980-17862022)
chr5 (128-162)||(27365640-27365674)
chr5 (180-222)||(27721693-27721735)
chr5 (180-221)||(3198331-3198372)
chr5 (182-223)||(16089453-16089494)
chr5 (178-219)||(16210957-16210998)
chr5 (190-223)||(20721061-20721094)
chr5 (177-218)||(37054291-37054332)
chr5 (180-221)||(39800055-39800096)
chr5 (113-162)||(39933440-39933489)
chr5 (182-223)||(42505875-42505916)
chr5 (180-228)||(32675305-32675353)
[»] chr3 (45 HSPs)
chr3 (1-162)||(42878259-42878423)
chr3 (287-383)||(38799011-38799108)
chr3 (226-285)||(38798929-38798986)
chr3 (180-223)||(27185478-27185521)
chr3 (180-223)||(18870742-18870785)
chr3 (184-222)||(759612-759650)
chr3 (177-223)||(7757081-7757127)
chr3 (177-219)||(12408176-12408218)
chr3 (177-223)||(28266714-28266760)
chr3 (177-223)||(29631184-29631230)
chr3 (187-225)||(51469826-51469864)
chr3 (182-223)||(35863830-35863871)
chr3 (182-223)||(45431951-45431992)
chr3 (180-228)||(1149081-1149129)
chr3 (180-220)||(23147998-23148038)
chr3 (184-223)||(1744007-1744046)
chr3 (180-223)||(8113579-8113622)
chr3 (180-223)||(8139716-8139759)
chr3 (180-223)||(10498712-10498755)
chr3 (180-223)||(10922325-10922368)
chr3 (180-223)||(16980371-16980414)
chr3 (192-223)||(31750435-31750466)
chr3 (180-223)||(41258972-41259015)
chr3 (180-223)||(43777073-43777116)
chr3 (180-223)||(52119377-52119420)
chr3 (180-223)||(53996300-53996343)
chr3 (180-222)||(529181-529223)
chr3 (177-223)||(7232201-7232247)
chr3 (177-222)||(88623-88667)
chr3 (182-223)||(977958-977999)
chr3 (190-223)||(1111858-1111891)
chr3 (180-221)||(4237004-4237045)
chr3 (178-219)||(5135080-5135121)
chr3 (182-223)||(8831362-8831403)
chr3 (182-223)||(10926472-10926513)
chr3 (195-228)||(12015753-12015786)
chr3 (178-223)||(21914088-21914133)
chr3 (181-222)||(24428491-24428532)
chr3 (190-223)||(48511261-48511294)
chr3 (180-224)||(7974528-7974572)
chr3 (183-223)||(35191834-35191874)
chr3 (183-223)||(38034826-38034866)
chr3 (180-236)||(43490421-43490477)
chr3 (179-223)||(50570206-50570250)
chr3 (179-223)||(54230116-54230160)
[»] chr6 (24 HSPs)
chr6 (180-223)||(21847195-21847238)
chr6 (181-223)||(8637454-8637496)
chr6 (177-223)||(14917792-14917838)
chr6 (180-221)||(5655326-5655367)
chr6 (180-223)||(10780124-10780167)
chr6 (190-223)||(8916491-8916524)
chr6 (180-228)||(12700433-12700481)
chr6 (180-223)||(2473604-2473647)
chr6 (180-223)||(8810641-8810684)
chr6 (180-223)||(9111048-9111091)
chr6 (180-223)||(10118918-10118961)
chr6 (192-223)||(12602038-12602069)
chr6 (180-223)||(17151237-17151280)
chr6 (180-223)||(20744139-20744182)
chr6 (180-223)||(26400865-26400908)
chr6 (180-223)||(32053789-32053832)
chr6 (184-223)||(34701152-34701191)
chr6 (177-223)||(1535301-1535347)
chr6 (180-217)||(7927701-7927738)
chr6 (190-219)||(16453358-16453387)
chr6 (180-221)||(24605697-24605738)
chr6 (180-228)||(7081666-7081714)
chr6 (180-228)||(12318768-12318816)
chr6 (187-223)||(28318035-28318071)
[»] chr4 (46 HSPs)
chr4 (180-219)||(43539816-43539855)
chr4 (76-146)||(43209281-43209351)
chr4 (180-223)||(11286798-11286841)
chr4 (180-223)||(20799411-20799454)
chr4 (184-223)||(21623436-21623475)
chr4 (180-223)||(50362156-50362199)
chr4 (177-223)||(11949780-11949826)
chr4 (180-226)||(12322674-12322720)
chr4 (177-223)||(23775516-23775562)
chr4 (178-223)||(22279537-22279582)
chr4 (178-223)||(46676515-46676560)
chr4 (180-225)||(55924802-55924847)
chr4 (180-223)||(2186350-2186393)
chr4 (180-223)||(7230281-7230324)
chr4 (180-219)||(8464096-8464135)
chr4 (184-223)||(8494992-8495031)
chr4 (184-223)||(10082407-10082446)
chr4 (180-223)||(13121545-13121588)
chr4 (180-223)||(19854566-19854609)
chr4 (180-223)||(20383489-20383532)
chr4 (180-223)||(21317355-21317398)
chr4 (181-228)||(21318265-21318312)
chr4 (180-223)||(23304033-23304076)
chr4 (180-223)||(30051884-30051927)
chr4 (180-223)||(43702346-43702389)
chr4 (180-223)||(44221448-44221491)
chr4 (180-223)||(50442764-50442807)
chr4 (180-223)||(51458679-51458722)
chr4 (180-223)||(52270047-52270090)
chr4 (180-223)||(56088090-56088133)
chr4 (128-162)||(1866245-1866279)
chr4 (185-223)||(2649750-2649788)
chr4 (177-219)||(8415516-8415558)
chr4 (180-222)||(29681475-29681517)
chr4 (180-222)||(47007320-47007362)
chr4 (178-223)||(675917-675962)
chr4 (182-223)||(836252-836293)
chr4 (180-221)||(17815450-17815491)
chr4 (180-221)||(25175155-25175196)
chr4 (180-221)||(33933764-33933805)
chr4 (178-219)||(34942432-34942473)
chr4 (182-223)||(47814268-47814309)
chr4 (179-223)||(1753369-1753413)
chr4 (190-222)||(16401310-16401342)
chr4 (179-223)||(20403185-20403229)
chr4 (180-223)||(32139340-32139384)
[»] chr2 (55 HSPs)
chr2 (180-223)||(10156018-10156061)
chr2 (180-223)||(20565092-20565135)
chr2 (180-223)||(22523029-22523072)
chr2 (180-223)||(44496717-44496760)
chr2 (177-223)||(11560496-11560542)
chr2 (180-222)||(11953947-11953989)
chr2 (128-162)||(13913466-13913500)
chr2 (177-219)||(34191329-34191371)
chr2 (178-223)||(34903516-34903561)
chr2 (178-223)||(40099400-40099445)
chr2 (180-228)||(27244658-27244706)
chr2 (184-228)||(29872184-29872228)
chr2 (187-223)||(37830721-37830757)
chr2 (180-219)||(2429017-2429056)
chr2 (180-223)||(3197096-3197139)
chr2 (180-223)||(7206126-7206169)
chr2 (184-223)||(8920493-8920532)
chr2 (180-223)||(9383226-9383269)
chr2 (180-223)||(9842219-9842262)
chr2 (180-223)||(10735848-10735891)
chr2 (180-223)||(11931606-11931649)
chr2 (180-223)||(13394999-13395042)
chr2 (180-219)||(15381634-15381673)
chr2 (177-228)||(15427690-15427741)
chr2 (180-223)||(18231490-18231533)
chr2 (180-223)||(19179067-19179110)
chr2 (180-223)||(20120738-20120781)
chr2 (180-223)||(22608528-22608571)
chr2 (184-223)||(24592863-24592902)
chr2 (180-223)||(24593377-24593420)
chr2 (184-223)||(26999115-26999154)
chr2 (180-223)||(27934874-27934917)
chr2 (180-223)||(29544628-29544671)
chr2 (180-223)||(31815904-31815947)
chr2 (180-223)||(35820318-35820361)
chr2 (185-228)||(37413191-37413234)
chr2 (180-223)||(38063768-38063811)
chr2 (180-223)||(41311985-41312028)
chr2 (180-223)||(45032694-45032737)
chr2 (180-218)||(36171529-36171567)
chr2 (181-219)||(43826463-43826501)
chr2 (190-223)||(231610-231643)
chr2 (178-219)||(10991541-10991582)
chr2 (182-223)||(12124687-12124728)
chr2 (180-221)||(23405200-23405241)
chr2 (185-222)||(35451261-35451298)
chr2 (179-228)||(35685073-35685122)
chr2 (180-221)||(38214815-38214856)
chr2 (118-162)||(3322919-3322963)
chr2 (182-222)||(7350549-7350589)
chr2 (178-206)||(7717646-7717674)
chr2 (180-228)||(18324906-18324954)
chr2 (181-221)||(32190027-32190067)
chr2 (178-226)||(40799608-40799656)
chr2 (180-220)||(42714440-42714480)
[»] chr7 (34 HSPs)
chr7 (185-223)||(16577877-16577915)
chr7 (185-223)||(16587747-16587785)
chr7 (185-223)||(34773237-34773275)
chr7 (182-223)||(48629082-48629123)
chr7 (180-223)||(5082305-5082348)
chr7 (180-223)||(5352330-5352373)
chr7 (180-223)||(5579694-5579737)
chr7 (180-223)||(7476727-7476770)
chr7 (180-223)||(8615024-8615067)
chr7 (180-223)||(10244728-10244771)
chr7 (180-223)||(12320184-12320227)
chr7 (180-223)||(18505674-18505717)
chr7 (180-223)||(21050239-21050282)
chr7 (180-223)||(24991782-24991825)
chr7 (180-223)||(38088034-38088077)
chr7 (180-223)||(39801707-39801750)
chr7 (180-223)||(46987087-46987130)
chr7 (180-223)||(47607927-47607970)
chr7 (180-222)||(5833043-5833085)
chr7 (184-222)||(7249065-7249103)
chr7 (181-223)||(21286352-21286394)
chr7 (180-222)||(26816682-26816724)
chr7 (180-222)||(28200403-28200445)
chr7 (177-223)||(33610942-33610988)
chr7 (177-219)||(40187657-40187699)
chr7 (180-222)||(40752857-40752899)
chr7 (128-162)||(43103839-43103873)
chr7 (180-221)||(4346662-4346703)
chr7 (182-223)||(18714451-18714492)
chr7 (190-223)||(47442498-47442531)
chr7 (180-223)||(145518-145562)
chr7 (178-218)||(40677179-40677219)
chr7 (180-228)||(42435410-42435458)
chr7 (178-221)||(47440835-47440879)
[»] scaffold1149 (1 HSPs)
scaffold1149 (180-223)||(2333-2376)
[»] scaffold0896 (1 HSPs)
scaffold0896 (180-223)||(3142-3185)
[»] scaffold0118 (1 HSPs)
scaffold0118 (180-223)||(39999-40042)
[»] scaffold0011 (1 HSPs)
scaffold0011 (180-223)||(223159-223202)
[»] scaffold0007 (1 HSPs)
scaffold0007 (179-222)||(221031-221074)
[»] scaffold0069 (1 HSPs)
scaffold0069 (128-162)||(15904-15938)
[»] scaffold0792 (1 HSPs)
scaffold0792 (185-222)||(878-915)
[»] scaffold0086 (1 HSPs)
scaffold0086 (180-225)||(1608-1653)
[»] scaffold0567 (1 HSPs)
scaffold0567 (187-223)||(7556-7592)
[»] scaffold0121 (1 HSPs)
scaffold0121 (182-222)||(3594-3634)
[»] scaffold0038 (1 HSPs)
scaffold0038 (187-223)||(109141-109177)


Alignment Details
Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4929978 - 4929817
Alignment:
Q  1 tgttgggagaagagagagcggtagtgagaagccaaacacacatgcgaggataaattttgtggacaaggtgcagtataaggaataagatctaatccattag 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4929978 tgttgggagaagagagagtggtagtgagaagccaaacacacatgcgaggataaattttgtggacaaagtgcagtataaggaataagatctaatccgttag 4929879  T
Q  101 atttaatttaacggttataatttagcactctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4929878 atttaatttaacggttataatttagcactctcatctctcattataagatgtcctctcacttg 4929817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 19620577 - 19620620
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  19620577 tgagcttagctcagttggtaaggacaatacataatatatgcaag 19620620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 21400083 - 21400040
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  21400083 tgagcttagctcagttggtagggacaatgcataatatatgcaag 21400040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 25532974 - 25533017
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  25532974 tgagcttagttcagttggtatggacaatgcataatatatgcaag 25533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 27533244 - 27533287
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  27533244 tgagcttagatcagttggtagggacaatgcataatatatgcaag 27533287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 34142427 - 34142381
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||    
T  34142427 tcatgagcttagctcagttggtatgcacaatacataatatatgcaag 34142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 8741477 - 8741518
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  8741477 tgagcttagttcagttggtagggacattacataatttatgca 8741518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 2889986 - 2889943
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  2889986 tgagcttaactcagttggtagggacaatgcataatatatgcaag 2889943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 8148425 - 8148382
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| | |||||||||||||||||||||    
T  8148425 tgagcttagctcagttggtaagaacaatacataatatatgcaag 8148382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 8253740 - 8253783
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  8253740 tgagcttagctcagttggtatggacaatgcataatatatgcaag 8253783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 8269424 - 8269385
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  8269424 cttagctcagttggtaaggacaatacataatatatgcaag 8269385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 12213994 - 12214037
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||    
T  12213994 tgagcttagctcagttgataggaacaatacataatatatgcaag 12214037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 13054874 - 13054917
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  13054874 tgagcttagcttagttggtagggacaatgcataatatatgcaag 13054917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 15595729 - 15595772
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||| | |||||||||||||||    
T  15595729 tgagcttagctcagttggtagggacattgcataatatatgcaag 15595772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 15803297 - 15803254
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| | ||||||| |||||||||||||||    
T  15803297 tgagcttagttcagttggcaaggacaatgcataatatatgcaag 15803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 17139577 - 17139534
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||    
T  17139577 tgagcttagctcagttggtagggacaatgcataatatattcaag 17139534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 17283952 - 17283995
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  17283952 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 17283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 34733401 - 34733444
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  34733401 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 34733444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 37098541 - 37098498
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||    
T  37098541 tgagcttagctcagttggtagggacaatgaataatatatgcaag 37098498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 38448926 - 38448883
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  38448926 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 38448883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 41677650 - 41677611
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  41677650 tgagcttagctcagttggtaaggacaatacataatatatg 41677611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 42045432 - 42045389
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  42045432 tgagcttagctcagttggtatggacaatgcataatatatgcaag 42045389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 43426181 - 43426220
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  43426181 tgagcttagctcagttggtagggacaatacataaaatatg 43426220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 45140066 - 45140023
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  45140066 tgagcttagctcagttggtatggacaatgcataatatatgcaag 45140023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 45190325 - 45190286
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  45190325 cttagttcagttggtatggacaatgcataatatatgcaag 45190286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 47070849 - 47070892
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  47070849 tgagtttagttcagttgataggaacaatacataatatatgcaag 47070892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 49183174 - 49183217
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||| |||||||||| |||||||||||||||||||||||    
T  49183174 tgagtttagctcagttggtaaggacaatacataatatatgcaag 49183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 7652107 - 7652141
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  7652107 ttagttcagttggtatggacaatacataatatatg 7652141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 10920140 - 10920174
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||||||||||| |||||||||||||||    
T  10920140 ctctcatctctcattataaaatgtcctctcacttg 10920174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 14389770 - 14389736
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  14389770 ctctcatctctcataataagatgtcctctcacttg 14389736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 15854151 - 15854105
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||||||||| |||| || |||||||||||||||    
T  15854151 tcatgagcttagctcagttggtatggacgatgcataatatatgcaag 15854105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 17201262 - 17201228
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatat 218  Q
    ||||| |||||||||||||||||||||||||||||    
T  17201262 cttagctcagttggtagggacaatacataatatat 17201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 30279680 - 30279638
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||    
T  30279680 tgagcttagctcagttgataggtacaatacataatatatgcaa 30279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 1072579 - 1072542
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  1072579 ttagttcagttggtagggacaatgcatgatatatgcaa 1072542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 9005690 - 9005719
Alignment:
Q  190 tcagttggtagggacaatacataatatatg 219  Q
    ||||||||||||||||||||||||||||||    
T  9005690 tcagttggtagggacaatacataatatatg 9005719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 50638974 - 50638933
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  50638974 agcttagctcagttggtaaggacaatgcataatatatgcaag 50638933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 3481561 - 3481605
Alignment:
Q  180 tgagcttagttcagttggtagggac-aatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||    
T  3481561 tgagcttagctcagttggtagggacaaatgcataatatatgcaag 3481605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 13234078 - 13234122
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||| |||||||||||| ||||  |||||||||||||||    
T  13234078 atgagcttagctcagttggtaggaacaacgcataatatatgcaag 13234122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 46707875 - 46707919
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaagttc 226  Q
    |||||||  ||||||||| ||||||| ||||||||||||||||||    
T  46707875 agcttagcccagttggtaaggacaatgcataatatatgcaagttc 46707919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 51503680 - 51503728
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||| ||| |||||||||||||||||| |||||||||| |||| ||||    
T  51503680 tgagcatagctcagttggtagggacaatgcataatatatccaaggtcta 51503728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 45107451 - 45107291
Alignment:
Q  1 tgttgggagaagagagagcggtagtgagaagccaaacacacatgcgaggataaattttgtggacaaggtgcagtataaggaataagatctaatccattag 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45107451 tgttgggagaagagagagcggtagtgagaagccagacacacatgcgaggataaattttgtggacaaggtgcagtataaggaataagatctaatccgttag 45107352  T
Q  101 atttaatttaacggttataatttagcactctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45107351 atttaatctaacggttataatttagcactctcat-tctcattataagatgtcctctcacttg 45107291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 11708987 - 11709030
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  11708987 tgagcttagctcagttggtagggacaatgcataatatatgcaag 11709030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 39821885 - 39821928
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  39821885 tgagcttagctcagttggtagggacaatgcataatatatgcaag 39821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 43962081 - 43962041
Alignment:
Q  183 gcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  43962081 gcttagctcagttggtaaggacaatacataatatatgcaag 43962041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 10601764 - 10601807
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||    
T  10601764 tgagcttaattcagttggtatggacaatgcataatatatgcaag 10601807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 11621176 - 11621219
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| ||||||||| || |||||||||||||||||||    
T  11621176 tgagcttagttaagttggtagagaaaatacataatatatgcaag 11621219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 15079212 - 15079169
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  15079212 tgagcttaactcagttggtagggacaatgcataatatatgcaag 15079169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 15572152 - 15572195
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||| || ||||||||||||||||    
T  15572152 tgagcttagctcagttggtagggataaaacataatatatgcaag 15572195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 17704014 - 17704057
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  17704014 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 17704057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 19778066 - 19778109
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  19778066 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 19778109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 30427732 - 30427775
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  30427732 tgagcttagctcagttggtatggacaatgcataatatatgcaag 30427775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 30623294 - 30623337
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  30623294 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 30623337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 37015896 - 37015853
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||    
T  37015896 tgagcttagctcagttggtagagacaatgcataatatatgcaag 37015853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 6446923 - 6446961
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  6446923 ttagttcagttggtagggacaatgcataatatatacaag 6446961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 8881273 - 8881319
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| | | |||||||||||||| |||||||||||||||    
T  8881273 tcatgagcttagctgacttggtagggacaatgcataatatatgcaag 8881319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 9656060 - 9656014
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||||||||| ||||||| ||||| |||||||||    
T  9656060 tcatgagcttagctcagttggtaaggacaatgcataaaatatgcaag 9656014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 12800951 - 12800917
Alignment:
Q  189 ttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||||||||||||||||||    
T  12800951 ttcagttggtatggacaatacataatatatgcaag 12800917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 13575290 - 13575336
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttc 226  Q
    |||| |||| |||||||||||||||||| ||||| ||||||||||||    
T  13575290 tgagtttagctcagttggtagggacaatgcataacatatgcaagttc 13575336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 32223939 - 32223897
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    
T  32223939 tgagcttagttcagttgatagagacaatgcataatatatgcaa 32223897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 36781409 - 36781451
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||    
T  36781409 tgagcctagctcagttggtaaggacaatacataatatatgcaa 36781451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 45396563 - 45396608
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||    
T  45396563 tcatgagcttagttaagttggta-ggacaatgcataatatatgcaag 45396608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 7553690 - 7553723
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| |||||||||||||||    
T  7553690 tcagttggtagggacaatgcataatatatgcaag 7553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 11771710 - 11771751
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||    
T  11771710 agcttagctcagttgatagagacaatacataatatatgcaag 11771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 12674922 - 12674882
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  12674922 agcttagctcagttggtagg-acaatacataatatatgcaag 12674882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 13059243 - 13059202
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| |||||||||||||||||| |||||| ||||||    
T  13059243 tgagcttagctcagttggtagggacaatgcataatttatgca 13059202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 13105105 - 13105138
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| |||||||||||||||    
T  13105105 tcagttggtagggacaatgcataatatatgcaag 13105138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 18942919 - 18942960
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  18942919 tgagcttagctcagttggtagggataatgcataatatatgca 18942960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 29908022 - 29908055
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| |||||||||||||||    
T  29908022 tcagttggtagggacaatgcataatatatgcaag 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 43330318 - 43330273
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||||||| ||||||||| || ||||||||||| ||||||||    
T  43330318 tcatgagcttagctcagttggttggaacaatacataaaatatgcaa 43330273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 12910866 - 12910818
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    |||| |||| |||||||||| ||||||| ||||||||||||||| ||||    
T  12910866 tgagattagctcagttggtatggacaatgcataatatatgcaaggtcta 12910818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 40423601 - 40423637
Alignment:
Q  184 cttagttcagttggtaggg-acaatacataatatatg 219  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40423601 cttagttcagttggtaggggacaatacataatatatg 40423637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38487558 - 38487718
Alignment:
Q  1 tgttgggagaagagagagcggtagtgagaagccaaacacacatgcgaggataaattttgtggacaaggtgcagtataaggaataagatctaatccattag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  38487558 tgttgggagaagagagagcggtagtgagaagccaaacacacatgcgaggataaattttgtggacaaggtgcagtataacgagtaagatctaatccgttag 38487657  T
Q  101 atttaatttaacggttataatttagcactctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  38487658 atttaatctaacggttataatttagcactctca-ctctcattataagatgtcctttcacttg 38487718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 15889412 - 15889460
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  15889412 tgagcttagctcagttggtagggacaatgcataatatatgcaaggtcta 15889460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 6489008 - 6489051
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  6489008 tgagcttagctcagttggtagggacaatgcataatatatgcaag 6489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 16752562 - 16752519
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  16752562 tgagcttagttcagttggtaaggacaatgcataatatatgcaag 16752519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 20927640 - 20927683
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  20927640 tgagcttagctcagttggtatggacaatacataatatatgcaag 20927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 34436852 - 34436895
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  34436852 tgagcttagctcagttggtagggacaatgcataatatatgcaag 34436895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 1082282 - 1082236
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||    
T  1082282 tcatgagcttagttcagttggtagggacaatgtataatatatacaag 1082236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 5485187 - 5485229
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  5485187 tgagcttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 14188395 - 14188353
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  14188395 tgagcttagttcagttggtatggacaatccataatatatgcaa 14188353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 22778288 - 22778254
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    |||||||||||||||||||||||||||||||||||    
T  22778288 ctctcatctctcattataagatgtcctctcacttg 22778254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 11720895 - 11720938
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  11720895 tgagcttaactcagttggtagggacaatgcataatatatgcaag 11720938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 16133125 - 16133082
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  16133125 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 16133082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 16531335 - 16531292
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||    
T  16531335 tgagcttggttcagttggtaaggacaatgcataatatatgcaag 16531292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 16701641 - 16701598
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||    
T  16701641 tgagcttagctcagttggtagggacaatgaataatatatgcaag 16701598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 17210769 - 17210726
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||| | |||||||||||||||    
T  17210769 tgagcttagctcagttggtagggacagtgcataatatatgcaag 17210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 20211281 - 20211324
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||| |||||||||||||||||||    
T  20211281 tgagcttatctcagttggtagggataatacataatatatgcaag 20211324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 33654749 - 33654792
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  33654749 tgagcttaactcagttggtagggacaatgcataatatatgcaag 33654792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 36321554 - 36321511
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  36321554 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 36321511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 37932331 - 37932374
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  37932331 tgagcttagctcagttggtatggacaatgcataatatatgcaag 37932374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 38353775 - 38353818
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||| ||||||  |||||||||||||||    
T  38353775 tgagcttagttcagttggtaaggacaacgcataatatatgcaag 38353818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 4573119 - 4573077
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||    
T  4573119 tgagcttagttcagttggtatggacaatgcataatataagcaa 4573077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 6375524 - 6375566
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||    
T  6375524 tgagcttagctcagttggtaaggacaatacataaaatatgcaa 6375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 8024403 - 8024445
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||| ||||||||||| | |||||||||    
T  8024403 gagcttagttcagttggtatggacaatacattaaatatgcaag 8024445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 16036829 - 16036871
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||| |||||||| | |||||||||||||||||||||||    
T  16036829 gagcttagctcagttggcatggacaatacataatatatgcaag 16036871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 17861980 - 17862022
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||| |||| |||||||||||||||||| ||||||||||||||    
T  17861980 tgagtttagctcagttggtagggacaatgcataatatatgcaa 17862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 27365640 - 27365674
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||||||||||| |||||||||||||||    
T  27365640 ctctcatctctcattataaaatgtcctctcacttg 27365674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 27721735 - 27721693
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||    
T  27721735 tgagcttagctcagttggtaggaacaatgcataatatatgcaa 27721693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 3198331 - 3198372
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| |||||||||||||||| | |||||||||||||    
T  3198331 tgagcttagctcagttggtagggacattgcataatatatgca 3198372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 16089453 - 16089494
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| ||||||| |||||||| ||||||    
T  16089453 agcttagttcagttggtatggacaatgcataatatttgcaag 16089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 16210998 - 16210957
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||||| ||| |||||||||||| |||||||||||||    
T  16210998 catgagcttagctcaattggtagggacattacataatatatg 16210957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 20721061 - 20721094
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||| |||||||||||||||||||||||    
T  20721061 tcagttggtatggacaatacataatatatgcaag 20721094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 37054332 - 37054291
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatat 218  Q
    ||||||| |||| |||||||||||||||||| ||||||||||    
T  37054332 tcatgagtttagctcagttggtagggacaatgcataatatat 37054291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 39800096 - 39800055
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| |||||||||||||||||| |||||| ||||||    
T  39800096 tgagcttagctcagttggtagggacaatgcataatttatgca 39800055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 39933489 - 39933440
Alignment:
Q  113 ggttataatttagcactctcatctctcattataagatgtcctctcacttg 162  Q
    |||||| ||||| | |||||||||||||  ||||||||||||||||||||    
T  39933489 ggttatgatttaaccctctcatctctcacaataagatgtcctctcacttg 39933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 42505875 - 42505916
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  42505875 agcttagctcagttggtatggacaatgcataatatatgcaag 42505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 32675353 - 32675305
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    |||||||||||||||||| | | ||||| ||||||||||||||| ||||    
T  32675353 tgagcttagttcagttggcaagaacaatgcataatatatgcaaggtcta 32675305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 5e-69; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42878259 - 42878423
Alignment:
Q  1 tgttgggagaagagagagcggtagtgagaagccaaacacacatgcgaggataa----attttgtggacaaggtgcagtataaggaataagatctaatcca 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||     
T  42878259 tgttgggagaagagagagcggtagtgagaagccaaacacacatgcgaggataaataaattttgtggacaaggtgcagtataaggaataagatctaatccg 42878358  T
Q  97 ttagatttaatttaacggttataatttagcactctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42878359 ttagatttaatctaacggttataatttagcactctca-ctctcattataagatgtcctctcacttg 42878423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 383
Target Start/End: Original strand, 38799011 - 38799108
Alignment:
Q  287 atgttaagggttaataaaattgaaagaacaagattcnnnnnnnnnn-gaaagaacaagattctatacgacaacatatgaaaggaaatgattttataag 383  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38799011 atgttaagggttaataaaattgaaagaacaagattctttttttttttgaaagaacaagattctatacgacaacatatgaaaggaaatgattttataag 38799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 38798929 - 38798986
Alignment:
Q  226 ctacaaaaataaatgtatatatataattgcactcaataaaatcaaaatgaaaacagtgtg 285  Q
    ||||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||    
T  38798929 ctacaaaaataaatgtacatat--aattgcacgcaataaaatcaaaatgaaaacagtgtg 38798986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 27185478 - 27185521
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  27185478 tgagcttagctcagttggtagggacaatacataatatatgcaag 27185521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 18870785 - 18870742
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  18870785 tgagcttagctcagttggtagggacaatgcataatatatgcaag 18870742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 759650 - 759612
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  759650 cttagttcagttggtagggacaatgcataatatatgcaa 759612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 7757081 - 7757127
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  7757081 tcatgagcttagttcagttggtatggacaatatataaaatatgcaag 7757127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 12408176 - 12408218
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  12408176 tcatgagtttagttcagttggtagggacaatgcataatatatg 12408218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 28266714 - 28266760
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  28266714 tcatgaggttagttcagttggtaaggacaatgcataatatatgcaag 28266760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 29631184 - 29631230
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||    
T  29631184 tcatgagcttagctcagttggtatggacaatgcataatatatgcaag 29631230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 51469864 - 51469826
Alignment:
Q  187 agttcagttggtagggacaatacataatatatgcaagtt 225  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  51469864 agttcagttggtagggacaatgcataatatatgcaagtt 51469826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 35863871 - 35863830
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  35863871 agcttagctcagttggtaaggacaatacataatatatgcaag 35863830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 45431951 - 45431992
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  45431951 agcttagctcagttggtagggacaatgcataatatatgcaag 45431992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 1149129 - 1149081
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||| ||||    
T  1149129 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtcta 1149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 23148038 - 23147998
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgc 220  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  23148038 tgagcttagctcagttggtaaggacaatacataatatatgc 23147998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 1744046 - 1744007
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  1744046 cttaattcagttggtatggacaatacataatatatgcaag 1744007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 8113622 - 8113579
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  8113622 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 8113579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 8139716 - 8139759
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||    
T  8139716 tgagcttagtttagttggtatggacaatgcataatatatgcaag 8139759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 10498755 - 10498712
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  10498755 tgagcttagctcagttggtatggacaatgcataatatatgcaag 10498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 10922368 - 10922325
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  10922368 tgagcttaactcagttggtagggacaatgcataatatatgcaag 10922325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 16980414 - 16980371
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  16980414 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 16980371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 223
Target Start/End: Original strand, 31750435 - 31750466
Alignment:
Q  192 agttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||||||||||||    
T  31750435 agttggtagggacaatacataatatatgcaag 31750466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 41258972 - 41259015
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||    
T  41258972 tgagcttagtttagttggtaaggacaatgcataatatatgcaag 41259015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 43777116 - 43777073
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||| || |||||||||||||||    
T  43777116 tgagcttagctcagttggtagggaccatgcataatatatgcaag 43777073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 52119377 - 52119420
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  52119377 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 52119420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 53996300 - 53996343
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  53996300 tgagcttagctcagttggtatggacaatgcataatatatgcaag 53996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 529181 - 529223
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||||||||||||||  |||||| ||||||||||||||    
T  529181 tgagcttagttcagttggtatcgacaatgcataatatatgcaa 529223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 7232247 - 7232201
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||||||||||  ||||| |||||||||||||||    
T  7232247 tcatgagcttaggtcagttggtagaaacaatgcataatatatgcaag 7232201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 88667 - 88623
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||    
T  88667 tcatgagcttatctcagttggtagg-acaatacataatatatgcaa 88623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 977999 - 977958
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  977999 agcttagctcagttggtatggacaatgcataatatatgcaag 977958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 1111891 - 1111858
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| ||||||||||||||||||||||||||    
T  1111891 tcagttgatagggacaatacataatatatgcaag 1111858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 4237045 - 4237004
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  4237045 tgagcttagttcagttggtagggacattgcataatttatgca 4237004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 5135080 - 5135121
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatg 219  Q
    |||||||||| ||||||||||| ||||||| |||||||||||    
T  5135080 catgagcttaattcagttggtaaggacaatgcataatatatg 5135121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 8831403 - 8831362
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| | |||||||||||||||||||||    
T  8831403 agcttagctcagttggtatgtacaatacataatatatgcaag 8831362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 10926472 - 10926513
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  10926472 agcttagctcagttggtaaggacaatgcataatatatgcaag 10926513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 12015753 - 12015786
Alignment:
Q  195 tggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||||||||||||||||||||||| ||||    
T  12015753 tggtagggacaatacataatatatgcaaggtcta 12015786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 21914133 - 21914088
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||  |||||||||| ||||||| |||||||||||||||    
T  21914133 catgagcttaactcagttggtaaggacaatgcataatatatgcaag 21914088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 24428532 - 24428491
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||| |||||||||| ||||||| ||||||||||||||    
T  24428532 gagcttagctcagttggtatggacaatgcataatatatgcaa 24428491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 48511261 - 48511294
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| |||||||||||||||    
T  48511261 tcagttggtagggacaatgcataatatatgcaag 48511294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 7974572 - 7974528
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagt 224  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  7974572 tgagcttagctcagttggtatggataatgcataatatatgcaagt 7974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 35191874 - 35191834
Alignment:
Q  183 gcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  35191874 gcttagctcagttggtaaggacaatgcataatatatgcaag 35191834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 38034866 - 38034826
Alignment:
Q  183 gcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||| ||||||||| |||||||||||||| |||||||||    
T  38034866 gcttagctcagttggttgggacaatacataaaatatgcaag 38034826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 43490477 - 43490421
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttctacaaaaata 236  Q
    ||||||||| |||||||||| | ||||| ||||||||||||||| || | |||||||    
T  43490477 tgagcttagctcagttggtatgaacaatgcataatatatgcaaggtcaaaaaaaata 43490421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 50570250 - 50570206
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||| ||||||||||  |||||| |||||||||||||||    
T  50570250 atgagcttagctcagttggtatagacaatgcataatatatgcaag 50570206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 54230160 - 54230116
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||| |||| |||||||||| ||||||| |||||||||||||||    
T  54230160 atgagtttagctcagttggtaaggacaatgcataatatatgcaag 54230116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 21847195 - 21847238
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  21847195 tgagcttagctcagttggtagggacaatacataatatatgcaag 21847238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 8637496 - 8637454
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  8637496 gagcttagttcagttggtagggacaatgcataatatatgcaag 8637454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 14917838 - 14917792
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  14917838 tcatgagcttagctcagttggtagggacgatacataatatatgcaag 14917792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 5655367 - 5655326
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  5655367 tgagcttagctcagttggtagggacaatacataatatatgca 5655326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 10780167 - 10780124
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  10780167 tgagcttagctcagttggtagggacaatgcataatatatgcaag 10780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 8916524 - 8916491
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||||||||||||||    
T  8916524 tcagttggtagggacaatacataatatatgcaag 8916491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 12700481 - 12700433
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    |||||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  12700481 tgagcttagttcagttggtatgaacaatgcataatatatgcaaggtcta 12700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 2473604 - 2473647
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||| |||||| |||||||||||||||||||||||||||    
T  2473604 tgaggttagctcagttagtagggacaatacataatatatgcaag 2473647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 8810641 - 8810684
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||    
T  8810641 tgagcttagctcagttggtaaagacaatacataatatatgcaag 8810684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 9111048 - 9111091
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||| | ||||| |||||||||||||||    
T  9111048 tgagcttagttcagttggtatgaacaatgcataatatatgcaag 9111091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 10118918 - 10118961
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| | |||||||||||||||||||||    
T  10118918 tgagcttagctcagttggtaagaacaatacataatatatgcaag 10118961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 223
Target Start/End: Original strand, 12602038 - 12602069
Alignment:
Q  192 agttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||||||||||||    
T  12602038 agttggtagggacaatacataatatatgcaag 12602069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 17151237 - 17151280
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||    
T  17151237 tgagcttagctaagttggtagtgacaatacataatatatgcaag 17151280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 20744139 - 20744182
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  20744139 tgagcttagctcagttggtatggacaatgcataatatatgcaag 20744182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 26400865 - 26400908
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||    
T  26400865 tgagcttagctcaattggtatggacaatacataatatatgcaag 26400908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 32053789 - 32053832
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  32053789 tgagcttagctcagttggtatggacaatgcataatatatgcaag 32053832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 34701152 - 34701191
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  34701152 cttagttcagttggtaggaacaatgcataatatatgcaag 34701191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 1535301 - 1535347
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| ||||||||||||||| |||| ||||| |||||||||||||||    
T  1535301 tcataagcttagttcagttgataggaacaatgcataatatatgcaag 1535347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 7927701 - 7927738
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatata 217  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  7927701 tgagcttagttcagttgatagggacaatgcataatata 7927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 16453387 - 16453358
Alignment:
Q  190 tcagttggtagggacaatacataatatatg 219  Q
    ||||||||||||||||||||||||||||||    
T  16453387 tcagttggtagggacaatacataatatatg 16453358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 24605697 - 24605738
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  24605697 tgagcttagttcagttgatatggacaatatataatatatgca 24605738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 7081714 - 7081666
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||| ||||    
T  7081714 tgagcttagctcagttgataaagacaatacataatatatgcaaggtcta 7081666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 12318768 - 12318816
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||||||||||| || | |||||||||||| |||||||| ||||    
T  12318768 tgagcttagttcagttgctatgaacaatacataatgtatgcaaggtcta 12318816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 28318035 - 28318071
Alignment:
Q  187 agttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  28318035 agttcagttggtatggacaatgcataatatatgcaag 28318071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 43539816 - 43539855
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43539816 tgagcttagttcagttggtagggacaatacataatatatg 43539855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 43209351 - 43209281
Alignment:
Q  76 taaggaataagatctaatccattagatttaatttaacggttataatttagcactctcatctctcattataa 146  Q
    ||||||||||||||| |  ||||||||| ||| || |||| |||||||| |||||||||||||||||||||    
T  43209351 taaggaataagatctcactcattagattaaatctatcggtaataatttaacactctcatctctcattataa 43209281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 11286841 - 11286798
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  11286841 tgagcttagttcagttggtagagacaatgcataatatatgcaag 11286798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 20799454 - 20799411
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  20799454 tgagcttagctcagttggtagggacaatgcataatatatgcaag 20799411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 21623475 - 21623436
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21623475 cttagttcagttggtagggacaatgcataatatatgcaag 21623436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 50362199 - 50362156
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  50362199 tgagcttagctcagttggtagggacaatgcataatatatgcaag 50362156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 11949826 - 11949780
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||    
T  11949826 tcatgagcttagctcagttggtatggacaatgcataatatatgcaag 11949780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 12322674 - 12322720
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttc 226  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  12322674 tgagcttagctcagttggtacggacaatgcataatatatgcaagttc 12322720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 23775516 - 23775562
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||    
T  23775516 tcatgagcttagcacagttggtagggacaatgcataatatatgcaag 23775562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 22279582 - 22279537
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  22279582 catgagcttagctcagttggtaaggacaatgcataatatatgcaag 22279537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 46676560 - 46676515
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  46676560 catgagcttagctcagttggtaaggacaatgcataatatatgcaag 46676515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 55924847 - 55924802
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagtt 225  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||    
T  55924847 tgagcttagctcaattggtaaggacaatacataatatatgcaagtt 55924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 2186393 - 2186350
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  2186393 tgagcttagctcagttggtatggacaatgcataatatatgcaag 2186350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 7230281 - 7230324
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  7230281 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 7230324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 8464135 - 8464096
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  8464135 tgagcttagctcagttggtaaggacaatacataatatatg 8464096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 8494992 - 8495031
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  8494992 cttagctcagttggtagggacaatgcataatatatgcaag 8495031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 10082407 - 10082446
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  10082407 cttagctcagttggtagggacaatacataatatatacaag 10082446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 13121545 - 13121588
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  13121545 tgagcttagcttagttggtagggacaatgcataatatatgcaag 13121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 19854566 - 19854609
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  19854566 tgagcttagctcagttggtatggacaatgcataatatatgcaag 19854609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 20383489 - 20383532
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  20383489 tgagcttagctcagttggtatggacaatgcataatatatgcaag 20383532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 21317398 - 21317355
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||    
T  21317398 tgagcttagctcagttggtagagacaatgcataatatatgcaag 21317355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 21318312 - 21318265
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    |||||||  |||||||||||||||||| ||||||||||||||| ||||    
T  21318312 gagcttaactcagttggtagggacaatgcataatatatgcaaggtcta 21318265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 23304076 - 23304033
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||  |||||||||||||||    
T  23304076 tgagcttagctcagttggtagggacaaggcataatatatgcaag 23304033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 30051927 - 30051884
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||| || ||||||| |||||||||||||||    
T  30051927 tgagcttagttcagttgttatggacaatgcataatatatgcaag 30051884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 43702389 - 43702346
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  43702389 tgaggttagctcagttgatagggacaatacataatatatgcaag 43702346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 44221448 - 44221491
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||    
T  44221448 tgagcttaattcagttggtatggacaatgcataatatatgcaag 44221491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 50442807 - 50442764
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||    
T  50442807 tgagcttagctcagttggtagggataatgcataatatatgcaag 50442764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 51458679 - 51458722
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||    
T  51458679 tgagcttagctcagttggtatggacaatacataaaatatgcaag 51458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 52270090 - 52270047
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  52270090 tgagcttagctcagttggtatggacaatgcataatatatgcaag 52270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 56088133 - 56088090
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||    
T  56088133 tgagcttagctcaattggtaaggacaatacataatatatgcaag 56088090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 1866245 - 1866279
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||||||||||| |||||||||||||||    
T  1866245 ctctcatctctcattataaaatgtcctctcacttg 1866279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 2649788 - 2649750
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  2649788 ttagctcagttggtagggacaatgcataatatatgcaag 2649750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 8415558 - 8415516
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  8415558 tcatgagcttaattcagttggtatggacaatgcataatatatg 8415516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 29681517 - 29681475
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  29681517 tgagcttagttcagttggtatggacaatgcataaaatatgcaa 29681475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 47007362 - 47007320
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||  ||||||| |||||||||||||||||||||||||    
T  47007362 tgagcttaactcagttgttagggacaatacataatatatgcaa 47007320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 675917 - 675962
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||||  ||||||| |||||||||||||||    
T  675917 catgagcttagctcagttggtttggacaatgcataatatatgcaag 675962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 836293 - 836252
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||||||||||| || ||||||||||||    
T  836293 agcttagctcagttggtagggacaatgcaaaatatatgcaag 836252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 17815491 - 17815450
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    |||||||||||||||||||||||| | |||||| ||||||||    
T  17815491 tgagcttagttcagttggtagggatattacatattatatgca 17815450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 25175196 - 25175155
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    |||||||||||||||||||||||| | |||||| ||||||||    
T  25175196 tgagcttagttcagttggtagggatattacatattatatgca 25175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 33933805 - 33933764
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| |||||||||||||||| | |||||||||||||    
T  33933805 tgagcttagctcagttggtagggacattgcataatatatgca 33933764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 34942473 - 34942432
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  34942473 catgagcttagttcagttggtagagacaatgtataatatatg 34942432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 47814309 - 47814268
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| |||||| ||||||||||||||||    
T  47814309 agcttagctcagttggtatggacaacacataatatatgcaag 47814268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 1753413 - 1753369
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||| ||||||| ||||| |||||||||    
T  1753413 atgagcttacttcagttggtaaggacaatgcataacatatgcaag 1753369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 16401310 - 16401342
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||||| |||||||||||||||||||||    
T  16401310 tcagttggtagagacaatacataatatatgcaa 16401342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 20403229 - 20403185
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||| ||||||| |||| ||||| |||||||||||||||    
T  20403229 atgagcttagctcagttgataggaacaatgcataatatatgcaag 20403185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 32139340 - 32139384
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacat-aatatatgcaag 223  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||    
T  32139340 tgagcttagctcagttgatagggacaatacataaatatatgcaag 32139384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 10156018 - 10156061
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  10156018 tgagcttagctcagttggtaaggacaatacataatatatgcaag 10156061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 20565135 - 20565092
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  20565135 tgagcttagctcagttggtagggacaatgcataatatatgcaag 20565092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 22523072 - 22523029
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  22523072 tgagcttagctcagttggtatggacaatacataatatatgcaag 22523029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 44496760 - 44496717
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  44496760 tgagcttagctcagttggtaaggacaatacataatatatgcaag 44496717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 11560496 - 11560542
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  11560496 tcatgagcttagctcaattggtagggacaatgcataatatatgcaag 11560542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 11953947 - 11953989
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  11953947 tgagctaagctcagttggtagggacaatacataatatatgcaa 11953989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 13913466 - 13913500
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    |||||||||||||||||||||||||||||||||||    
T  13913466 ctctcatctctcattataagatgtcctctcacttg 13913500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 34191371 - 34191329
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatg 219  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  34191371 tcatgagcttagctcagttggtagggacaatgcataatatatg 34191329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 34903516 - 34903561
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||    
T  34903516 catgagcttagttcagttggtaaggacagtgcataatatatgcaag 34903561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 40099445 - 40099400
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  40099445 catgagcttagctcagttggtaaggacaatgcataatatatgcaag 40099400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 27244658 - 27244706
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  27244658 tgagcttagctcagttgatagggacaatgcataatatatgcaaggtcta 27244706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 29872228 - 29872184
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||    
T  29872228 cttagttcagttggtatgaacaatacataatatatgcaaggtcta 29872184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 37830721 - 37830757
Alignment:
Q  187 agttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||||||||||||||||||| ||||    
T  37830721 agttcagttggtagggacaatacataatatatacaag 37830757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 2429017 - 2429056
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatg 219  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  2429017 tgagcttagttcagttggtaaggacaatgcataatatatg 2429056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 3197139 - 3197096
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||| |||||||||||||||||| |||||||||||||||    
T  3197139 tgagtttagctcagttggtagggacaatgcataatatatgcaag 3197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 7206126 - 7206169
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||    
T  7206126 tgagcttagctcagttggtagagacaatgcataatatatgcaag 7206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 8920493 - 8920532
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  8920493 cttaggtcagttggtagggacagtacataatatatgcaag 8920532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 9383269 - 9383226
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  9383269 tgagcttagctcagttggtatggacaatgcataatatatgcaag 9383226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 9842262 - 9842219
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||    
T  9842262 tgagcttagctcagttggtagggacaatgcataaaatatgcaag 9842219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 10735891 - 10735848
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||||||| || |||||||||||||||    
T  10735891 tgagcttagctcagttggtagggacgatgcataatatatgcaag 10735848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 11931606 - 11931649
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||| | |||||||||||||| |||||||||||||||    
T  11931606 tgagcttagtttaattggtagggacaatgcataatatatgcaag 11931649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 13395042 - 13394999
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||    
T  13395042 tgagcttagctcagttggtagggacaatgcatgatatatgcaag 13394999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 15381634 - 15381673
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  15381634 tgagcttagctcagttagtagggacaatacataatatatg 15381673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 15427690 - 15427741
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    |||||||||||| ||||||| || |||||||| |||||||||||||| ||||    
T  15427690 tcatgagcttagctcagttgatatggacaatatataatatatgcaaggtcta 15427741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 18231533 - 18231490
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  18231533 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 18231490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 19179110 - 19179067
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  19179110 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 19179067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 20120781 - 20120738
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  20120781 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 20120738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 22608528 - 22608571
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||    
T  22608528 tgagcttagctcagttggtagagacaatgcataatatatgcaag 22608571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 24592902 - 24592863
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  24592902 cttagctcagttggtagggacaatgcataatatatgcaag 24592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 24593377 - 24593420
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  24593377 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 24593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 26999115 - 26999154
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  26999115 cttagttcagttggtagagacaatgcataatatatgcaag 26999154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 27934917 - 27934874
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||    
T  27934917 tgagcttagctcagttggtaaggacaatacataatatatacaag 27934874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 29544628 - 29544671
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||    
T  29544628 tgagcttagctcaattggtagggacaatgcataatatatgcaag 29544671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 31815947 - 31815904
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  31815947 tgagcttaactcagttggtagggacaatgcataatatatgcaag 31815904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 35820361 - 35820318
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||    
T  35820361 tgagcttagctcagttggtagggacaatgcataatacatgcaag 35820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 37413234 - 37413191
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||    
T  37413234 ttagttcagttggtagggacaatgcataaaatatgcaaggtcta 37413191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 38063768 - 38063811
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| |||| || |||||||||||||||||||||||    
T  38063768 tgagcttagttcggttgataaggacaatacataatatatgcaag 38063811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 41311985 - 41312028
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||||||| | ||||||||| |||||||||||||||    
T  41311985 tgagcttagttcagttagcagggacaatgcataatatatgcaag 41312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 45032694 - 45032737
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  45032694 tgagcttacctcagttggtagggacaatgcataatatatgcaag 45032737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 36171529 - 36171567
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatat 218  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  36171529 tgagcttaactcagttggtagggacaatacataatatat 36171567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 43826501 - 43826463
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatg 219  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  43826501 gagcttagctcagttggtaaggacaatacataatatatg 43826463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 231643 - 231610
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||| |||||||||||||||||||||||    
T  231643 tcagttggtatggacaatacataatatatgcaag 231610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 10991541 - 10991582
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatg 219  Q
    ||||||||||  |||||||||| |||||||||||||||||||    
T  10991541 catgagcttaactcagttggtaaggacaatacataatatatg 10991582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 12124687 - 12124728
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  12124687 agcttagctcagttggtaaggacaatgcataatatatgcaag 12124728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 23405200 - 23405241
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||| |||||||||||||||| | |||||||||||||    
T  23405200 tgagcttagctcagttggtagggacattgcataatatatgca 23405241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 35451298 - 35451261
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaa 222  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  35451298 ttagctcagttggtagagacaatacataatatatgcaa 35451261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 35685122 - 35685073
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||| |||| |||||||||| ||||||| ||||||||||||||| ||||    
T  35685122 atgagtttagctcagttggtaaggacaatgcataatatatgcaaggtcta 35685073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 38214856 - 38214815
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    |||||||  ||||||||||||||||||| |||||||||||||    
T  38214856 tgagcttgattcagttggtagggacaattcataatatatgca 38214815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 3322963 - 3322919
Alignment:
Q  118 taatttagcactctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||| | ||||||||||||||| ||| |||||||||||||||    
T  3322963 taatttaactctctcatctctcattttaaaatgtcctctcacttg 3322919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 7350549 - 7350589
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||| |||||||||| ||||||| ||||||||||||||    
T  7350549 agcttagctcagttggtatggacaatgcataatatatgcaa 7350589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 7717674 - 7717646
Alignment:
Q  178 catgagcttagttcagttggtagggacaa 206  Q
    |||||||||||||||||||||||||||||    
T  7717674 catgagcttagttcagttggtagggacaa 7717646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 18324954 - 18324906
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||  |||||||||| ||||||| ||||||||||||||| ||||    
T  18324954 tgagcttaactcagttggtaaggacaatgcataatatatgcaagatcta 18324906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 32190067 - 32190027
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgca 221  Q
    ||||||||||||||||||||||||| | |||||| ||||||    
T  32190067 gagcttagttcagttggtagggacattgcataatttatgca 32190027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 40799656 - 40799608
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatatgcaagttc 226  Q
    ||||| |||||||| |||| || ||||||| ||||||||||||||||||    
T  40799656 catgaacttagttcggttgataaggacaatgcataatatatgcaagttc 40799608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 42714440 - 42714480
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgc 220  Q
    |||||||||||||||||||| ||||||| ||||| ||||||    
T  42714440 tgagcttagttcagttggtatggacaatgcataaaatatgc 42714480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 16577915 - 16577877
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  16577915 ttagctcagttggtagggacaatacataatatatgcaag 16577877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 16587747 - 16587785
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  16587747 ttagctcagttggtagggacaatacataatatatgcaag 16587785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 34773237 - 34773275
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  34773237 ttagttcagttggtagggacaatgcataatatatgcaag 34773275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 48629123 - 48629082
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  48629123 agcttagttcagttgttagggacaatgcataatatatgcaag 48629082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 5082305 - 5082348
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  5082305 tgagcttaactcagttggttgggacaatacataatatatgcaag 5082348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 5352330 - 5352373
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||    
T  5352330 tgagcttagctcagttggtaaggacaatacataatatatacaag 5352373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 5579694 - 5579737
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||| | |||||||||||||||    
T  5579694 tgagcttagctcagttggtagggacagtgcataatatatgcaag 5579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 7476727 - 7476770
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| || ||||||||||||    
T  7476727 tgagcttagatcagttggtagggacaatgcacaatatatgcaag 7476770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 8615024 - 8615067
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  8615024 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 8615067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 10244728 - 10244771
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  10244728 tgagcttagctcagttggtatggacaatgcataatatatgcaag 10244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 12320184 - 12320227
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||    
T  12320184 tgagcttagctcagttggtagggacaatgcataatttatgcaag 12320227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 18505717 - 18505674
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||    
T  18505717 tgagcttagctcagttggtagggacaatgcataaaatatgcaag 18505674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 21050282 - 21050239
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  21050282 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 21050239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 24991782 - 24991825
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  24991782 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 24991825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 38088077 - 38088034
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||    
T  38088077 tgagcttagctcagttggtaaggacaaaacataatatatgcaag 38088034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 39801707 - 39801750
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  39801707 tgagcttagctcagttggtatggacaatgcataatatatgcaag 39801750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 46987087 - 46987130
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  46987087 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 46987130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 47607970 - 47607927
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||| |||| |||||||||||||||| |||||||||||||||||    
T  47607970 tgagtttagctcagttggtagggacattacataatatatgcaag 47607927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 5833043 - 5833085
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||    
T  5833043 tgagcttagctcagttggtagggataatgcataatatatgcaa 5833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 7249103 - 7249065
Alignment:
Q  184 cttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  7249103 cttagatcagttggtaaggacaatacataatatatgcaa 7249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 21286352 - 21286394
Alignment:
Q  181 gagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||| ||| |||||| |||||||||||||||||||||||    
T  21286352 gagcttagctcaattggtatggacaatacataatatatgcaag 21286394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 26816724 - 26816682
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||    
T  26816724 tgagcttagctcagttggtagggataatgcataatatatgcaa 26816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 28200445 - 28200403
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||  |||||||||||| ||||||||||||||||||||    
T  28200445 tgagcttaactcagttggtaggaacaatacataatatatgcaa 28200403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 33610988 - 33610942
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||||| ||||||| || ||||||| |||||||||||||||    
T  33610988 tcatgagcttagctcagttgttacggacaatgcataatatatgcaag 33610942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 40187699 - 40187657
Alignment:
Q  177 tcatgagcttagttcagttggtagggacaatacataatatatg 219  Q
    |||||||||||  |||||||||||||||||| |||||||||||    
T  40187699 tcatgagcttaactcagttggtagggacaatgcataatatatg 40187657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 40752899 - 40752857
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||    
T  40752899 tgagcttagctcagttagtatggacaatacataatatatgcaa 40752857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 43103873 - 43103839
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||||||||||| |||||||||||||||    
T  43103873 ctctcatctctcattataaaatgtcctctcacttg 43103839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 4346662 - 4346703
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgca 221  Q
    |||| |||| |||||||||||||||||| |||||||||||||    
T  4346662 tgagattagctcagttggtagggacaatgcataatatatgca 4346703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 18714451 - 18714492
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  18714451 agcttagctcagttggtaaggacaatgcataatatatgcaag 18714492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 47442498 - 47442531
Alignment:
Q  190 tcagttggtagggacaatacataatatatgcaag 223  Q
    |||||||||| |||||||||||||||||||||||    
T  47442498 tcagttggtaaggacaatacataatatatgcaag 47442531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 145518 - 145562
Alignment:
Q  180 tgagcttagttcagttggtagggacaataca-taatatatgcaag 223  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||    
T  145518 tgagcttagttcagttggtaaggacaacacattaatatatgcaag 145562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 40677179 - 40677219
Alignment:
Q  178 catgagcttagttcagttggtagggacaatacataatatat 218  Q
    |||||||| || |||| ||||||||||||||||||||||||    
T  40677179 catgagctcagctcagctggtagggacaatacataatatat 40677219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 42435458 - 42435410
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagttcta 228  Q
    ||||||||| ||||||||||| ||| || ||||||||||||||| ||||    
T  42435458 tgagcttagctcagttggtagagactatgcataatatatgcaaggtcta 42435410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 47440879 - 47440835
Alignment:
Q  178 catgagcttagttcagttggtagggac-aatacataatatatgca 221  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  47440879 catgagcttagctcagttggtagggacaaatgcataatatatgca 47440835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 2333 - 2376
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| || ||||||||||||||| |||||||||||||||    
T  2333 tgagcttagctcggttggtagggacaatgcataatatatgcaag 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 3142 - 3185
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||    
T  3142 tgagcttagctcagttggtaaagacaatacataatatatgcaag 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 39999 - 40042
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||    
T  39999 tgagcttagctcagttggtatggacaatgcataatatatgcaag 40042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 223159 - 223202
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||    
T  223159 tgagcttagctcagttggtatggacaatacataaaatatgcaag 223202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 221074 - 221031
Alignment:
Q  179 atgagcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  221074 atgagtttagctcagttggtagggataatacataatatatgcaa 221031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 15904 - 15938
Alignment:
Q  128 ctctcatctctcattataagatgtcctctcacttg 162  Q
    ||||||||||||||||||||||||||||| |||||    
T  15904 ctctcatctctcattataagatgtcctctaacttg 15938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 915 - 878
Alignment:
Q  185 ttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  915 ttagttcagttggtagggacaatgcatgatatatgcaa 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 1608 - 1653
Alignment:
Q  180 tgagcttagttcagttggtagggacaatacataatatatgcaagtt 225  Q
    ||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  1608 tgagcttaggttagttgatagggacaatacataatatatccaagtt 1653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 7592 - 7556
Alignment:
Q  187 agttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  7592 agttcagttggtatggacaatgcataatatatgcaag 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 3634 - 3594
Alignment:
Q  182 agcttagttcagttggtagggacaatacataatatatgcaa 222  Q
    ||||||||||||||||| |||||||| ||||| ||||||||    
T  3634 agcttagttcagttggttgggacaatgcataaaatatgcaa 3594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 109141 - 109177
Alignment:
Q  187 agttcagttggtagggacaatacataatatatgcaag 223  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  109141 agttcagttggtatggacaatgcataatatatgcaag 109177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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