View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8969_low_61 (Length: 275)
Name: NF8969_low_61
Description: NF8969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8969_low_61 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 7 - 275
Target Start/End: Original strand, 6068691 - 6068959
Alignment:
| Q |
7 |
tttggagttcaagtttacaaaataataagaactagcaggtatgctgtnnnnnnntagttatttaactgttttaagtaagtttttgtgataatgaatgaga |
106 |
Q |
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| T |
6068691 |
tttggtgttcaagtttacaaaataataagaactagcaggtatgctgtaaaaatatagttatttagctgttttaagtaagtttttgtgataatgaatgaga |
6068790 |
T |
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| Q |
107 |
tgaagaaggacttgatttaataaagtagtagtaggaataaacacaacatatatgagactatcgaaagggagtaagaagttgcaaaccttgtgtgatattt |
206 |
Q |
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| T |
6068791 |
tgaagaaggacttgatttaattaagtagtagtaggaataaacacaacatatatgagactatcgaaagggagtaagaagttgcaaaccttgtgtgatattt |
6068890 |
T |
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| Q |
207 |
gtggaaagatcttcaagtggcttaaagattatactatgtcctgactctaattcaactgccttcttcaac |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
6068891 |
gtggaaagatcttcaagtggcttaaagattatactatgtcctgattctaattcaactgccttcttcaac |
6068959 |
T |
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