View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8971_high_50 (Length: 267)
Name: NF8971_high_50
Description: NF8971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8971_high_50 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 28821842 - 28822074
Alignment:
| Q |
22 |
ataatagaaacttacaagaaaggaaaatagttaattgggtatggcacatgtgcagtgata---aactagtgatggaggttcccactgtcccaaacacaac |
118 |
Q |
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| T |
28821842 |
ataatagaaacttacaagaaagggaaatagttaattgggtatggcacatgtgcagtgatagataactagtgatggaggttccaactgtcccaaacacaac |
28821941 |
T |
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| Q |
119 |
acaagttgtcaactttttacactgatccgaacatttcatataattcaattagattcattcattcatttcatactatgcttttgcacggtcccatcattca |
218 |
Q |
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| T |
28821942 |
acaagttgtcaactttttacactgatccgaacatttcatataattcaattagattcattcattcatttcatactatgcttttgcacggtcccatcattca |
28822041 |
T |
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| Q |
219 |
tcagaatcaccaaattgtgttgtgcgaataata |
251 |
Q |
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| T |
28822042 |
tcagaatcaccaaattgtgttgtgcgaataata |
28822074 |
T |
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