View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8971_low_103 (Length: 296)

Name: NF8971_low_103
Description: NF8971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8971_low_103
NF8971_low_103
[»] chr3 (90 HSPs)
chr3 (1-278)||(16722168-16722445)
chr3 (76-275)||(9266974-9267173)
chr3 (76-275)||(19112763-19112963)
chr3 (76-273)||(35995677-35995874)
chr3 (76-278)||(20853694-20853897)
chr3 (76-275)||(30500042-30500239)
chr3 (76-275)||(45970095-45970295)
chr3 (76-275)||(21633076-21633275)
chr3 (76-272)||(14262035-14262231)
chr3 (76-275)||(49986708-49986907)
chr3 (77-275)||(14162051-14162248)
chr3 (76-272)||(45003679-45003874)
chr3 (82-275)||(52552695-52552890)
chr3 (77-275)||(5800785-5800982)
chr3 (76-275)||(15328640-15328840)
chr3 (76-275)||(14171586-14171784)
chr3 (76-275)||(33372586-33372783)
chr3 (77-275)||(4204709-4204906)
chr3 (76-275)||(43572571-43572769)
chr3 (76-270)||(17465366-17465561)
chr3 (144-273)||(38283732-38283861)
chr3 (76-220)||(14262271-14262415)
chr3 (77-220)||(5800605-5800748)
chr3 (143-273)||(47575339-47575468)
chr3 (76-189)||(14171852-14171965)
chr3 (76-220)||(16721990-16722134)
chr3 (76-191)||(43572388-43572503)
chr3 (76-188)||(45969914-45970026)
chr3 (77-220)||(14161871-14162014)
chr3 (76-191)||(20853960-20854074)
chr3 (76-191)||(30500305-30500419)
chr3 (78-220)||(52552923-52553065)
chr3 (77-177)||(19720333-19720433)
chr3 (77-220)||(19113000-19113143)
chr3 (76-191)||(33372405-33372520)
chr3 (76-189)||(11003731-11003844)
chr3 (76-188)||(49986526-49986639)
chr3 (77-191)||(45003496-45003610)
chr3 (76-220)||(9267210-9267353)
chr3 (76-220)||(21632900-21633039)
chr3 (76-220)||(35995913-35996054)
chr3 (76-215)||(45058731-45058869)
chr3 (82-134)||(27946114-27946166)
chr3 (77-220)||(15328463-15328603)
chr3 (76-191)||(17465631-17465746)
chr3 (76-134)||(27946186-27946244)
chr3 (76-191)||(36990924-36991038)
chr3 (76-191)||(37016364-37016478)
chr3 (80-188)||(17649277-17649384)
chr3 (80-220)||(38283553-38283693)
chr3 (151-273)||(35995756-35995878)
chr3 (89-191)||(35740829-35740929)
chr3 (76-134)||(3424773-3424831)
chr3 (76-130)||(3425973-3426027)
chr3 (76-134)||(35741905-35741963)
chr3 (232-273)||(4204786-4204827)
chr3 (232-273)||(43572650-43572691)
chr3 (155-273)||(16722173-16722291)
chr3 (233-273)||(21633156-21633196)
chr3 (76-132)||(24490242-24490298)
chr3 (76-220)||(47575507-47575650)
chr3 (76-218)||(32998371-32998511)
chr3 (77-191)||(1068913-1069026)
chr3 (236-273)||(20853959-20853996)
chr3 (236-273)||(32998397-32998434)
chr3 (236-273)||(43572467-43572504)
chr3 (233-273)||(9267053-9267093)
chr3 (237-273)||(14262114-14262150)
chr3 (244-275)||(11003912-11003943)
chr3 (156-273)||(45003679-45003796)
chr3 (155-268)||(49986710-49986823)
chr3 (237-273)||(11003882-11003919)
chr3 (236-273)||(14161949-14161986)
chr3 (237-273)||(15328610-15328647)
chr3 (158-191)||(17465528-17465561)
chr3 (236-273)||(21632974-21633011)
chr3 (236-273)||(33372484-33372521)
chr3 (236-273)||(45003574-45003611)
chr3 (237-273)||(45970065-45970102)
chr3 (237-273)||(14162135-14162171)
chr3 (233-273)||(14171664-14171704)
chr3 (237-273)||(15328724-15328760)
chr3 (237-273)||(16722069-16722105)
chr3 (236-272)||(19113028-19113064)
chr3 (233-273)||(20853774-20853814)
chr3 (237-273)||(30500119-30500155)
chr3 (151-191)||(38283728-38283768)
chr3 (241-273)||(45970183-45970215)
chr3 (151-191)||(47575432-47575472)
chr3 (237-273)||(52552770-52552806)
[»] chr7 (77 HSPs)
chr7 (76-275)||(23704841-23705039)
chr7 (77-275)||(20419536-20419734)
chr7 (76-273)||(25772363-25772559)
chr7 (76-275)||(20458691-20458889)
chr7 (78-275)||(44816832-44817033)
chr7 (77-275)||(41599958-41600156)
chr7 (76-275)||(12006540-12006738)
chr7 (77-275)||(38879723-38879922)
chr7 (77-275)||(23383499-23383698)
chr7 (76-275)||(48672276-48672477)
chr7 (76-275)||(10409554-10409752)
chr7 (78-273)||(48648263-48648457)
chr7 (77-275)||(20963494-20963693)
chr7 (109-275)||(24194971-24195142)
chr7 (76-219)||(28218177-28218321)
chr7 (78-272)||(31851242-31851434)
chr7 (76-275)||(33162715-33162915)
chr7 (76-191)||(28218427-28218542)
chr7 (77-219)||(16995200-16995341)
chr7 (76-191)||(41600222-41600337)
chr7 (76-191)||(48672543-48672658)
chr7 (80-266)||(7657972-7658159)
chr7 (76-191)||(12006804-12006919)
chr7 (76-220)||(23383735-23383879)
chr7 (77-191)||(23704662-23704775)
chr7 (76-220)||(25772566-25772710)
chr7 (81-220)||(1250441-1250580)
chr7 (77-191)||(20419800-20419915)
chr7 (76-191)||(20458955-20459069)
chr7 (78-275)||(1250207-1250404)
chr7 (76-189)||(20963760-20963872)
chr7 (77-220)||(38879959-38880099)
chr7 (77-220)||(6465855-6465997)
chr7 (78-188)||(7658236-7658342)
chr7 (76-128)||(31852157-31852209)
chr7 (79-220)||(48648464-48648603)
chr7 (146-188)||(31851506-31851548)
chr7 (77-129)||(24195198-24195250)
chr7 (76-134)||(6466126-6466184)
chr7 (77-180)||(14800931-14801033)
chr7 (77-180)||(15247923-15248025)
chr7 (234-275)||(28218320-28218361)
chr7 (155-273)||(20419614-20419732)
chr7 (155-273)||(23704843-23704961)
chr7 (233-273)||(28218257-28218297)
chr7 (233-273)||(44816913-44816953)
chr7 (76-134)||(14646971-14647029)
chr7 (76-191)||(33131632-33131747)
chr7 (143-192)||(10409440-10409489)
chr7 (236-273)||(12006803-12006840)
chr7 (236-273)||(23704739-23704776)
chr7 (143-191)||(24194929-24194978)
chr7 (236-273)||(28218426-28218463)
chr7 (236-273)||(38879987-38880024)
chr7 (236-273)||(41600221-41600258)
chr7 (232-272)||(6466037-6466077)
chr7 (233-273)||(12006618-12006658)
chr7 (233-273)||(16995277-16995317)
chr7 (233-269)||(20458773-20458809)
chr7 (233-273)||(20963573-20963613)
chr7 (155-191)||(20963655-20963691)
chr7 (82-134)||(23258245-23258297)
chr7 (233-273)||(38879802-38879842)
chr7 (236-272)||(48672542-48672578)
chr7 (148-191)||(44817099-44817142)
chr7 (6-48)||(10693946-10693988)
chr7 (244-273)||(7842517-7842546)
chr7 (236-273)||(20419799-20419836)
chr7 (236-269)||(20458954-20458987)
chr7 (237-273)||(24194941-24194978)
chr7 (236-273)||(25772594-25772631)
chr7 (237-273)||(28218354-28218391)
chr7 (236-268)||(6465937-6465969)
chr7 (237-272)||(23704812-23704848)
chr7 (233-273)||(24195056-24195096)
chr7 (233-273)||(41600036-41600076)
chr7 (233-269)||(48672361-48672397)
[»] chr6 (49 HSPs)
chr6 (76-275)||(18500314-18500513)
chr6 (77-275)||(26385278-26385476)
chr6 (76-275)||(24732118-24732316)
chr6 (88-275)||(33714494-33714685)
chr6 (87-272)||(32017550-32017731)
chr6 (76-273)||(33637709-33637896)
chr6 (91-269)||(30618147-30618326)
chr6 (143-275)||(9481362-9481494)
chr6 (80-275)||(30458903-30459099)
chr6 (77-220)||(9481182-9481325)
chr6 (144-275)||(14680949-14681080)
chr6 (76-191)||(32017768-32017882)
chr6 (155-275)||(2299389-2299508)
chr6 (81-268)||(10321737-10321922)
chr6 (80-188)||(26385541-26385649)
chr6 (76-224)||(9854118-9854264)
chr6 (78-191)||(19284130-19284243)
chr6 (76-191)||(24731934-24732052)
chr6 (206-275)||(3229992-3230061)
chr6 (82-187)||(9154884-9154990)
chr6 (76-129)||(18500655-18500708)
chr6 (76-220)||(30617966-30618105)
chr6 (100-188)||(3230129-3230217)
chr6 (76-133)||(2299635-2299692)
chr6 (78-134)||(34884558-34884614)
chr6 (237-275)||(17142798-17142836)
chr6 (90-195)||(14681142-14681247)
chr6 (144-188)||(17142744-17142788)
chr6 (90-129)||(34113591-34113630)
chr6 (76-134)||(2299339-2299397)
chr6 (87-125)||(30459229-30459267)
chr6 (147-184)||(2299580-2299617)
chr6 (236-273)||(19284207-19284244)
chr6 (77-134)||(21069514-21069571)
chr6 (143-220)||(33637625-33637702)
chr6 (233-273)||(18500392-18500432)
chr6 (154-220)||(10321966-10322032)
chr6 (237-274)||(17142829-17142867)
chr6 (76-134)||(21070858-21070916)
chr6 (232-273)||(9854146-9854187)
chr6 (236-273)||(24732016-24732053)
chr6 (236-273)||(32017767-32017804)
chr6 (155-191)||(3230023-3230059)
chr6 (237-273)||(9481446-9481482)
chr6 (155-191)||(17142798-17142834)
chr6 (233-273)||(24732198-24732238)
chr6 (233-273)||(26385356-26385396)
chr6 (155-191)||(26385438-26385474)
chr6 (233-273)||(33714565-33714605)
[»] chr8 (67 HSPs)
chr8 (76-275)||(10108550-10108749)
chr8 (76-275)||(5555049-5555248)
chr8 (77-275)||(43851665-43851862)
chr8 (76-272)||(14820477-14820673)
chr8 (76-273)||(7689705-7689902)
chr8 (76-266)||(21147935-21148126)
chr8 (76-275)||(17622889-17623085)
chr8 (76-275)||(42605933-42606132)
chr8 (76-275)||(14767505-14767705)
chr8 (76-275)||(26136865-26137063)
chr8 (81-275)||(22494564-22494757)
chr8 (85-275)||(42112993-42113182)
chr8 (88-275)||(30789519-30789705)
chr8 (76-275)||(26532781-26532981)
chr8 (76-220)||(10108369-10108513)
chr8 (76-275)||(2583500-2583700)
chr8 (76-220)||(5554868-5555012)
chr8 (76-215)||(10171383-10171522)
chr8 (77-220)||(14820295-14820437)
chr8 (76-189)||(30789773-30789886)
chr8 (76-220)||(21148171-21148315)
chr8 (76-191)||(7689523-7689637)
chr8 (77-220)||(2583320-2583463)
chr8 (171-268)||(43481408-43481505)
chr8 (80-220)||(17623122-17623261)
chr8 (76-185)||(26136684-26136793)
chr8 (76-188)||(43481581-43481694)
chr8 (76-220)||(42113219-42113360)
chr8 (77-220)||(14767742-14767882)
chr8 (77-134)||(18044148-18044205)
chr8 (95-220)||(21144740-21144865)
chr8 (76-134)||(35367409-35367467)
chr8 (146-191)||(42605822-42605867)
chr8 (76-131)||(20877069-20877124)
chr8 (76-134)||(20875697-20875755)
chr8 (233-273)||(26136945-26136985)
chr8 (82-134)||(39888486-39888538)
chr8 (146-189)||(22494454-22494497)
chr8 (76-134)||(1949651-1949709)
chr8 (76-191)||(28977618-28977733)
chr8 (76-183)||(38726686-38726793)
chr8 (76-134)||(40487735-40487793)
chr8 (232-269)||(30789589-30789626)
chr8 (233-273)||(7689783-7689823)
chr8 (237-273)||(21148015-21148051)
chr8 (233-273)||(22494644-22494684)
chr8 (233-273)||(43851742-43851782)
chr8 (239-273)||(30789773-30789807)
chr8 (237-273)||(2583470-2583507)
chr8 (236-273)||(7689601-7689638)
chr8 (236-273)||(10108448-10108485)
chr8 (237-273)||(14767698-14767735)
chr8 (236-273)||(14820372-14820409)
chr8 (232-273)||(42113062-42113103)
chr8 (233-273)||(2583580-2583620)
chr8 (237-273)||(5555133-5555169)
chr8 (155-191)||(10108552-10108588)
chr8 (237-273)||(10108634-10108670)
chr8 (233-273)||(10171403-10171443)
chr8 (237-273)||(14767585-14767621)
chr8 (237-273)||(14820558-14820594)
chr8 (233-269)||(17622969-17623005)
chr8 (155-191)||(17623047-17623083)
chr8 (90-134)||(17720982-17721026)
chr8 (76-132)||(40486628-40486684)
chr8 (236-272)||(42605832-42605868)
chr8 (155-191)||(43851824-43851860)
[»] chr4 (88 HSPs)
chr4 (78-275)||(9516611-9516808)
chr4 (77-273)||(26252418-26252615)
chr4 (76-275)||(9619159-9619358)
chr4 (76-272)||(9396882-9397077)
chr4 (77-275)||(31090060-31090259)
chr4 (76-275)||(38573968-38574166)
chr4 (82-275)||(4356061-4356253)
chr4 (76-275)||(3018192-3018389)
chr4 (76-275)||(31944130-31944329)
chr4 (76-275)||(46046429-46046622)
chr4 (82-275)||(37012712-37012905)
chr4 (78-275)||(34063983-34064180)
chr4 (82-275)||(48579871-48580064)
chr4 (79-275)||(48259931-48260126)
chr4 (78-268)||(15640902-15641093)
chr4 (77-270)||(3273806-3273996)
chr4 (80-275)||(13131943-13132139)
chr4 (147-275)||(7819194-7819322)
chr4 (80-260)||(35376322-35376502)
chr4 (76-275)||(18667469-18667669)
chr4 (76-275)||(18713140-18713341)
chr4 (80-220)||(3018014-3018155)
chr4 (80-191)||(38574232-38574343)
chr4 (77-191)||(9516874-9516988)
chr4 (79-220)||(9618982-9619123)
chr4 (76-220)||(13132176-13132318)
chr4 (76-191)||(46046688-46046802)
chr4 (80-220)||(9396702-9396842)
chr4 (76-191)||(31090325-31090440)
chr4 (85-191)||(15640724-15640829)
chr4 (76-188)||(31943949-31944061)
chr4 (76-188)||(37012974-37013085)
chr4 (76-201)||(12904746-12904870)
chr4 (82-191)||(48580130-48580239)
chr4 (76-191)||(3273620-3273736)
chr4 (76-191)||(48259822-48259938)
chr4 (78-188)||(35376164-35376273)
chr4 (77-191)||(41947120-41947232)
chr4 (76-134)||(31218302-31218360)
chr4 (92-220)||(34064217-34064345)
chr4 (80-187)||(7819018-7819124)
chr4 (82-220)||(4355887-4356024)
chr4 (76-132)||(41946964-41947020)
chr4 (76-134)||(36887679-36887737)
chr4 (146-220)||(26252337-26252411)
chr4 (143-220)||(18713026-18713103)
chr4 (76-218)||(36888917-36889057)
chr4 (76-128)||(7819347-7819399)
chr4 (87-134)||(51029094-51029141)
chr4 (76-217)||(20069538-20069677)
chr4 (76-165)||(12904874-12904963)
chr4 (76-217)||(31082184-31082324)
chr4 (89-190)||(31083362-31083463)
chr4 (76-134)||(53896445-53896503)
chr4 (236-273)||(9619058-9619095)
chr4 (232-273)||(15640974-15641015)
chr4 (236-273)||(26252346-26252383)
chr4 (236-273)||(36888943-36888980)
chr4 (236-273)||(43312287-43312324)
chr4 (77-134)||(43313532-43313589)
chr4 (232-272)||(3273879-3273919)
chr4 (233-273)||(7819274-7819314)
chr4 (155-273)||(9516688-9516806)
chr4 (233-273)||(31090139-31090179)
chr4 (233-269)||(34064064-34064100)
chr4 (233-273)||(35376388-35376428)
chr4 (237-273)||(37012785-37012821)
chr4 (159-273)||(38574046-38574160)
chr4 (76-124)||(46935170-46935218)
chr4 (76-116)||(50462735-50462775)
chr4 (156-191)||(9396882-9396917)
chr4 (236-273)||(3018090-3018127)
chr4 (236-273)||(3273700-3273737)
chr4 (236-273)||(7819092-7819129)
chr4 (236-273)||(9516873-9516910)
chr4 (145-218)||(12520707-12520780)
chr4 (237-273)||(18667439-18667476)
chr4 (236-273)||(31090324-31090361)
chr4 (236-273)||(38574231-38574268)
chr4 (236-273)||(46046687-46046724)
chr4 (155-191)||(7819196-7819232)
chr4 (233-273)||(9396959-9396999)
chr4 (83-131)||(12520643-12520691)
chr4 (232-268)||(13132024-13132060)
chr4 (237-273)||(13132205-13132241)
chr4 (233-273)||(26252497-26252537)
chr4 (237-269)||(34064246-34064278)
chr4 (233-273)||(46046502-46046542)
[»] chr1 (78 HSPs)
chr1 (76-275)||(39711252-39711451)
chr1 (76-275)||(17606488-17606685)
chr1 (76-272)||(39826049-39826245)
chr1 (76-275)||(4906961-4907160)
chr1 (76-275)||(33628689-33628888)
chr1 (77-268)||(30299418-30299609)
chr1 (76-272)||(34749137-34749332)
chr1 (76-273)||(20995851-20996046)
chr1 (76-272)||(48072144-48072340)
chr1 (77-270)||(13229916-13230110)
chr1 (77-275)||(52058011-52058209)
chr1 (96-275)||(42510034-42510212)
chr1 (77-275)||(24467808-24468002)
chr1 (76-272)||(43539530-43539726)
chr1 (76-275)||(8292984-8293187)
chr1 (77-268)||(39970645-39970837)
chr1 (76-275)||(29696743-29696936)
chr1 (76-275)||(18462465-18462663)
chr1 (77-189)||(39826312-39826424)
chr1 (147-275)||(7473862-7473990)
chr1 (76-191)||(18462285-18462399)
chr1 (76-191)||(52058272-52058387)
chr1 (77-213)||(18342261-18342395)
chr1 (76-184)||(29696564-29696671)
chr1 (76-188)||(30299231-30299342)
chr1 (77-220)||(8292804-8292947)
chr1 (77-220)||(39970880-39971024)
chr1 (77-220)||(4907197-4907340)
chr1 (80-216)||(17606307-17606447)
chr1 (76-191)||(24467628-24467742)
chr1 (77-220)||(39711074-39711215)
chr1 (76-191)||(33628954-33629069)
chr1 (76-203)||(30252150-30252279)
chr1 (100-220)||(16294182-16294302)
chr1 (77-220)||(34749340-34749483)
chr1 (77-191)||(48071961-48072075)
chr1 (79-220)||(43539349-43539490)
chr1 (76-134)||(20995697-20995755)
chr1 (209-274)||(215044-215109)
chr1 (89-218)||(17501967-17502095)
chr1 (76-134)||(26271206-26271264)
chr1 (76-134)||(27039637-27039695)
chr1 (155-220)||(20995747-20995812)
chr1 (232-273)||(24467886-24467927)
chr1 (232-273)||(52058089-52058130)
chr1 (82-134)||(42510336-42510388)
chr1 (76-134)||(17500768-17500826)
chr1 (76-134)||(43400752-43400810)
chr1 (236-273)||(4907225-4907262)
chr1 (236-273)||(17501993-17502030)
chr1 (236-273)||(24467706-24467743)
chr1 (236-273)||(33628953-33628990)
chr1 (82-131)||(37236723-37236772)
chr1 (77-134)||(43401071-43401128)
chr1 (236-273)||(52058271-52058308)
chr1 (233-273)||(4907040-4907080)
chr1 (233-273)||(8293067-8293107)
chr1 (82-134)||(26266420-26266472)
chr1 (233-273)||(29696818-29696858)
chr1 (233-273)||(30299491-30299531)
chr1 (233-273)||(39826128-39826168)
chr1 (155-273)||(42510092-42510210)
chr1 (76-127)||(16294048-16294099)
chr1 (233-268)||(39970729-39970764)
chr1 (232-270)||(17606389-17606427)
chr1 (239-273)||(39826312-39826346)
chr1 (237-273)||(4907153-4907190)
chr1 (232-269)||(7473874-7473911)
chr1 (148-185)||(13229803-13229840)
chr1 (232-273)||(16294206-16294247)
chr1 (236-273)||(18462363-18462400)
chr1 (232-273)||(18462543-18462584)
chr1 (155-191)||(17606490-17606526)
chr1 (237-273)||(17606572-17606608)
chr1 (233-273)||(33628768-33628808)
chr1 (233-273)||(34749215-34749255)
chr1 (236-272)||(34749368-34749404)
chr1 (233-273)||(39711332-39711372)
[»] chr2 (68 HSPs)
chr2 (77-275)||(23806132-23806330)
chr2 (76-273)||(26236277-26236473)
chr2 (76-275)||(17463271-17463470)
chr2 (77-275)||(15106247-15106443)
chr2 (76-272)||(26560555-26560749)
chr2 (77-275)||(22263192-22263389)
chr2 (76-272)||(19251653-19251848)
chr2 (81-273)||(30390463-30390655)
chr2 (77-275)||(42670717-42670917)
chr2 (77-275)||(17850587-17850784)
chr2 (77-275)||(26135997-26136195)
chr2 (76-275)||(20498925-20499124)
chr2 (77-272)||(23854688-23854861)
chr2 (76-191)||(19251470-19251584)
chr2 (76-275)||(33290229-33290426)
chr2 (80-253)||(13254638-13254811)
chr2 (153-275)||(13284484-13284606)
chr2 (76-191)||(17850850-17850965)
chr2 (155-275)||(39878282-39878402)
chr2 (77-220)||(42670954-42671097)
chr2 (76-220)||(22263426-22263572)
chr2 (77-191)||(15106067-15106181)
chr2 (88-220)||(26135828-26135960)
chr2 (76-220)||(26236126-26236270)
chr2 (76-187)||(13254496-13254607)
chr2 (77-188)||(34548574-34548684)
chr2 (90-220)||(33290062-33290192)
chr2 (76-191)||(20498746-20498859)
chr2 (77-220)||(17463092-17463234)
chr2 (78-220)||(26560789-26560932)
chr2 (76-218)||(30959909-30960050)
chr2 (76-188)||(39878102-39878213)
chr2 (76-183)||(23046706-23046813)
chr2 (76-218)||(12418960-12419101)
chr2 (76-218)||(12431020-12431161)
chr2 (77-134)||(30958684-30958741)
chr2 (77-183)||(44098894-44099000)
chr2 (144-220)||(23854901-23854977)
chr2 (77-124)||(23855025-23855072)
chr2 (89-134)||(13284734-13284779)
chr2 (155-273)||(26236277-26236395)
chr2 (76-134)||(23047903-23047961)
chr2 (232-273)||(13284667-13284708)
chr2 (232-270)||(13254695-13254733)
chr2 (147-220)||(13284643-13284716)
chr2 (236-273)||(17850849-17850886)
chr2 (147-220)||(23806022-23806095)
chr2 (77-134)||(39878394-39878450)
chr2 (233-273)||(15106327-15106367)
chr2 (233-273)||(23806212-23806252)
chr2 (237-273)||(26560632-26560668)
chr2 (233-273)||(30390537-30390577)
chr2 (99-191)||(21482144-21482235)
chr2 (145-216)||(36359111-36359182)
chr2 (76-126)||(13284411-13284461)
chr2 (232-273)||(13284486-13284527)
chr2 (232-273)||(17463169-17463210)
chr2 (237-273)||(17463241-17463278)
chr2 (236-273)||(19251548-19251585)
chr2 (156-189)||(19251653-19251686)
chr2 (232-273)||(20499004-20499045)
chr2 (236-273)||(22263454-22263491)
chr2 (237-273)||(23806102-23806139)
chr2 (236-273)||(26135895-26135932)
chr2 (236-273)||(26236205-26236242)
chr2 (232-273)||(39878361-39878402)
chr2 (237-273)||(22263269-22263305)
chr2 (155-191)||(22263351-22263387)
[»] scaffold0361 (3 HSPs)
scaffold0361 (76-275)||(4743-4941)
scaffold0361 (76-191)||(4561-4677)
scaffold0361 (155-273)||(4745-4863)
[»] chr5 (72 HSPs)
chr5 (76-275)||(24837168-24837367)
chr5 (77-273)||(18336638-18336833)
chr5 (91-278)||(41001370-41001554)
chr5 (77-275)||(23979082-23979279)
chr5 (77-275)||(31799640-31799838)
chr5 (82-275)||(7125923-7126115)
chr5 (76-275)||(4918988-4919188)
chr5 (76-275)||(14144081-14144280)
chr5 (76-275)||(17762462-17762661)
chr5 (78-275)||(993751-993944)
chr5 (76-273)||(14411847-14412044)
chr5 (79-275)||(24650704-24650898)
chr5 (76-269)||(6817122-6817314)
chr5 (76-275)||(29444986-29445184)
chr5 (76-248)||(30512287-30512459)
chr5 (76-248)||(30552627-30552799)
chr5 (76-273)||(27158990-27159185)
chr5 (143-272)||(20709278-20709407)
chr5 (108-270)||(24074487-24074649)
chr5 (76-220)||(14143901-14144044)
chr5 (76-220)||(24074302-24074446)
chr5 (76-220)||(7126152-7126296)
chr5 (76-220)||(14411696-14411840)
chr5 (76-220)||(17762282-17762425)
chr5 (77-220)||(24837404-24837547)
chr5 (82-220)||(27159192-27159327)
chr5 (78-191)||(41001617-41001729)
chr5 (77-191)||(994010-994123)
chr5 (76-189)||(20709478-20709590)
chr5 (90-275)||(22571090-22571275)
chr5 (81-220)||(29444810-29444949)
chr5 (76-220)||(24650934-24651078)
chr5 (76-220)||(31799875-31800018)
chr5 (77-191)||(18336467-18336582)
chr5 (78-191)||(4919254-4919366)
chr5 (76-188)||(6817388-6817500)
chr5 (144-216)||(20959330-20959402)
chr5 (76-128)||(28071825-28071877)
chr5 (156-273)||(20709290-20709407)
chr5 (76-216)||(41424515-41424655)
chr5 (233-275)||(30512363-30512405)
chr5 (233-275)||(30552703-30552745)
chr5 (232-273)||(6817200-6817241)
chr5 (227-268)||(20947056-20947097)
chr5 (232-273)||(23979160-23979201)
chr5 (233-273)||(4919068-4919108)
chr5 (237-273)||(27159068-27159104)
chr5 (237-273)||(31799718-31799754)
chr5 (230-273)||(994003-994046)
chr5 (236-270)||(17762363-17762397)
chr5 (232-274)||(20947011-20947053)
chr5 (145-191)||(32233967-32234013)
chr5 (237-273)||(993937-993974)
chr5 (236-273)||(7126180-7126217)
chr5 (232-273)||(14143979-14144020)
chr5 (233-266)||(17762542-17762575)
chr5 (240-273)||(20959358-20959391)
chr5 (232-269)||(22571159-22571196)
chr5 (236-273)||(41001616-41001653)
chr5 (232-273)||(41424594-41424635)
chr5 (233-273)||(993825-993865)
chr5 (237-273)||(7125995-7126031)
chr5 (155-191)||(7126077-7126113)
chr5 (237-273)||(14144165-14144201)
chr5 (236-268)||(14411780-14411812)
chr5 (233-273)||(14411926-14411966)
chr5 (155-191)||(18336638-18336674)
chr5 (237-273)||(18336720-18336756)
chr5 (100-128)||(22571404-22571432)
chr5 (233-273)||(24837247-24837287)
chr5 (237-273)||(29445070-29445106)
chr5 (233-273)||(41001431-41001471)
[»] scaffold0185 (2 HSPs)
scaffold0185 (76-275)||(3868-4067)
scaffold0185 (159-191)||(4029-4061)
[»] scaffold0141 (3 HSPs)
scaffold0141 (77-275)||(8503-8700)
scaffold0141 (76-188)||(8324-8434)
scaffold0141 (233-273)||(8582-8622)
[»] scaffold0449 (3 HSPs)
scaffold0449 (78-268)||(7227-7422)
scaffold0449 (76-188)||(7466-7579)
scaffold0449 (233-273)||(7304-7344)
[»] scaffold0809 (4 HSPs)
scaffold0809 (76-275)||(1590-1785)
scaffold0809 (76-220)||(1410-1553)
scaffold0809 (236-273)||(1488-1525)
scaffold0809 (235-273)||(1672-1710)
[»] scaffold0477 (3 HSPs)
scaffold0477 (76-273)||(4929-5125)
scaffold0477 (76-134)||(4879-4937)
scaffold0477 (233-273)||(5008-5048)
[»] scaffold0881 (3 HSPs)
scaffold0881 (143-275)||(286-418)
scaffold0881 (76-187)||(487-596)
scaffold0881 (233-266)||(305-338)
[»] scaffold0117 (2 HSPs)
scaffold0117 (82-221)||(12216-12355)
scaffold0117 (239-273)||(12248-12282)
[»] scaffold0352 (4 HSPs)
scaffold0352 (76-192)||(4666-4782)
scaffold0352 (76-191)||(5942-6058)
scaffold0352 (237-273)||(4745-4781)
scaffold0352 (236-273)||(5941-5978)
[»] scaffold0176 (1 HSPs)
scaffold0176 (76-220)||(15867-16007)
[»] scaffold0157 (2 HSPs)
scaffold0157 (145-218)||(137-210)
scaffold0157 (83-131)||(226-274)
[»] scaffold0586 (1 HSPs)
scaffold0586 (77-117)||(5872-5912)


Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 16722445 - 16722168
Alignment:
Q  1 cagaagatagtttttcagttcttgttcaataactgcacctatcccttatttttacacactcacacannnnnnnnnagggtaaatacctcttttcgtccct 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||    
T  16722445 cagaagatagtttttcagttcttgttcaataacagcacctatcccttatttttacacactcacacatttttttttagggtaaatacctcttttcgtccct 16722346  T
Q  101 gtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccacc 200  Q
    |||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16722345 gtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccacc 16722246  T
Q  201 atgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccagaa 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16722245 atgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccagaa 16722168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 9266974 - 9267173
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  9266974 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 9267073  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9267074 tccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 9267173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 19112763 - 19112963
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||         ||||||||||||||||||| ||||||||||||    
T  19112763 agggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattc 19112862  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19112863 ttccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggacc 19112962  T
Q  275 a 275  Q
    |    
T  19112963 a 19112963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 76 - 273
Target Start/End: Original strand, 35995677 - 35995874
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||| |||||    
T  35995677 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattct 35995776  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  35995777 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagggac 35995874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 76 - 278
Target Start/End: Original strand, 20853694 - 20853897
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||         |||||||||||||||||| |||||||||||||    
T  20853694 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattc 20853793  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20853794 ttccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaattacagagacc 20853893  T
Q  275 agaa 278  Q
    ||||    
T  20853894 agaa 20853897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 30500042 - 30500239
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  30500042 agggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatattct 30500139  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  30500140 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaattacatggacca 30500239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 45970295 - 45970095
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||| |||||||||||||||||||| ||||    
T  45970295 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattc 45970196  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||| ||  ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45970195 ttccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggacc 45970096  T
Q  275 a 275  Q
    |    
T  45970095 a 45970095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 21633275 - 21633076
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||        ||||||||||||||||||||||||||| |||||    
T  21633275 agggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattct 21633176  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21633175 tccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 21633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 272
Target Start/End: Original strand, 14262035 - 14262231
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||||         |||||||||||||||||||||||||| |||||    
T  14262035 agggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattct 14262134  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  14262135 tccacttttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 14262231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 49986907 - 49986708
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnnga-tttagattttgtccctgtaatttcatattc 174  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||         | |||||||||||||  |||||||||||||||    
T  49986907 agggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgtct-tgtaatttcatattc 49986809  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49986808 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 49986709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 14162248 - 14162051
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||        |||||||||||||||| |||||||||| ||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta-aaaaagagatttagattttgtccttgtaatttcagattctt 14162150  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||||||| || |||| ||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  14162149 ccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggacca 14162051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 45003874 - 45003679
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||| |||||| ||||||||||||||    
T  45003874 agggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgta-aaaaaaagatttagatttagtccctataatttcatattct 45003776  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||    
T  45003775 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaattacaggga 45003679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 275
Target Start/End: Original strand, 52552695 - 52552890
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn--gatttagattttgtccctgtaatttcatattcttcca 179  Q
    |||| |||||||||||||| |||||||||| ||||||| |||||||| |||||          ||||||||||||||||||||||||||| |||||||||    
T  52552695 aatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaatttcagattcttcca 52552794  T
Q  180 cttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  52552795 cttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacagggacca 52552890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 5800982 - 5800785
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||        |||||||||||||||| |||||||||||||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 5800884  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||  | |||| ||| |||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  5800883 ccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaaatggaggaatttgaaattacagggacca 5800785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 15328840 - 15328640
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||  ||         ||||||||||||||||||||||||||| |||     
T  15328840 agggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagattt 15328741  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15328740 ttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggacc 15328641  T
Q  275 a 275  Q
    |    
T  15328640 a 15328640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 14171586 - 14171784
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||| |  |||||        ||||||||||||||||||||||||||| |||||    
T  14171586 agggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgta-aaaaaaagatttagattttgtccctgtaatttcaaattct 14171684  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| ||||| ||||||||| || ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  14171685 tccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaattacagggacca 14171784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 33372783 - 33372586
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||         ||||||||||||||||||||||||||| |||||    
T  33372783 agggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattct 33372684  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| ||||  ||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  33372683 tccacttttgatcccc-attccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagagacca 33372586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 4204709 - 4204906
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||| |||||||||||||||||||||||||  ||||||| |||||||| ||||||        |||||||||| |||||||||||||||| ||||||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgta-aaaaaaagatttagattatgtccctgtaatttcagattctt 4204807  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  4204808 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaattacagagacca 4204906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 43572769 - 43572571
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||| |||||||||||||  | |||| |||||||||| ||||||         ||||||||| |||||||||||||||| |||||    
T  43572769 agggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagattct 43572671  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||| ||||| || |||||||||||| || |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43572670 tccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaagtggagtaatttgaaattacagggacca 43572571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 76 - 270
Target Start/End: Original strand, 17465366 - 17465561
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtc-cctgtaatttcatattc 174  Q
    |||||||||||||||||| |||| | |||||||||||||||  | ||||||| ||||||        ||||||||||| ||| |||||||||||| ||||    
T  17465366 agggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcagattc 17465465  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 270  Q
    ||||| ||||| || || ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  17465466 ttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagg 17465561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 273
Target Start/End: Complemental strand, 38283861 - 38283732
Alignment:
Q  144 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggacc 243  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||| || || || ||||||||||||||||||| ||||||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggacc 38283762  T
Q  244 aaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| |||||||||| ||||    
T  38283761 aaaagtggaggaatttgaaattacacggac 38283732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 14262415 - 14262271
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| |    
T  14262415 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgt 14262316  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||| ||||||  || || || || |||||||||||||||    
T  14262315 tccacttttagtccctcctttcatcacgtcagcagaatctgcata 14262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 5800605 - 5800748
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 5800704  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||| |||||||||||  || || || || |||||||||||||||    
T  5800705 ccatttttggtccctcctttcatcacgtcagcagaatctgcata 5800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 143 - 273
Target Start/End: Original strand, 47575339 - 47575468
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggac 242  Q
    ||||||||||||||   |||||||| |||||||| |||||||||||||| ||||||||| |  ||||||||||||||||||| ||||||||||||||||     
T  47575339 gatttagattttgtttatgtaattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggat 47575437  T
Q  243 caaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||| |||||||||||||||    
T  47575438 caaaagtggaggaatttgaaattacagggac 47575468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 14171965 - 14171852
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||  |||||    
T  14171965 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattct 14171866  T
Q  176 tccacttttggtcc 189  Q
    ||||||||||||||    
T  14171865 tccacttttggtcc 14171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 16721990 - 16722134
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||         ||||||||||||||| |||||||||| |||||    
T  16721990 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattct 16722089  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||| || || || || | |||||||||||||    
T  16722090 tccacttttggtcccttctttcatcaagtcaacagaatctgcata 16722134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 43572388 - 43572503
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||    
T  43572388 agggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattct 43572487  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  43572488 tccacttttggtccct 43572503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 45969914 - 45970026
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  45969914 agggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 45970013  T
Q  176 tccacttttggtc 188  Q
    | |||||||||||    
T  45970014 ttcacttttggtc 45970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 14161871 - 14162014
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||||||| ||| ||        |||||||||| |||||||||||||||||||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattctt 14161970  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  || || || || |||||||||||||||    
T  14161971 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 14162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 20854074 - 20853960
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||| |||||    
T  20854074 agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20853976  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  20853975 tccacttttggtccct 20853960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 30500419 - 30500305
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||         |||||||||||||||||||||||||||||| |    
T  30500419 agggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgta-aaaaaaaaatttagattttgtccctgtaatttcatattgt 30500321  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  30500320 tccacttttggtccct 30500305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 52553065 - 52552923
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||| ||||||||||| |||||||||||||||||   |||||||||||||||        ||||||||||||||| |||||||||||||||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||  || || || || |||||||||||||||    
T  52552965 cacttttggtccctcctttcatcacgtcagcagaatctgcata 52552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 19720333 - 19720433
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 19720432  T
Q  177 c 177  Q
    |    
T  19720433 c 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 19113143 - 19113000
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||        |||||||||||| |||||||||||||| ||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    | |||||||||||||  || || || || | |||||||||||||    
T  19113043 ctacttttggtccctcctttcatcaagtcaacagaatctgcata 19113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 33372405 - 33372520
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||        ||||||||||||||||||||||||||| ||| |    
T  33372405 agggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattat 33372504  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  33372505 tccacttttggtccct 33372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 11003731 - 11003844
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||        || ||||||||||||| |||||||||| |||||    
T  11003731 agggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattct 11003830  T
Q  176 tccacttttggtcc 189  Q
    ||||||||||||||    
T  11003831 tccacttttggtcc 11003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 49986526 - 49986639
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |        ||||||||||||||||||||||||||| ||||    
T  49986526 agggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 49986625  T
Q  175 ttccacttttggtc 188  Q
    ||| ||||||||||    
T  49986626 ttctacttttggtc 49986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 45003496 - 45003610
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| ||||||||||||| ||||||||||| |||| |||||| ||||||| ||        ||||||||||||||||||||||||||| ||||||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattctt 45003595  T
Q  177 ccacttttggtccct 191  Q
    |||||||| ||||||    
T  45003596 ccactttttgtccct 45003610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 9267353 - 9267210
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||          ||||||||||||||||||||| ||| |||||    
T  9267353 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgta-tataaattttttagattttgtccctgtaatatcagattct 9267255  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    || |||||||||||||  || || || || | |||||||||||||    
T  9267254 tctacttttggtccctcctttcatcaagtcaacagaatctgcata 9267210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 21632900 - 21633039
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||     ||||||||||||||        ||| ||||| ||||||||||||||||| |||||    
T  21632900 agggtaaatacctcttttcgtccctgtaatattagcgaat-----ttttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattct 21632994  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    | ||||||||||||||  || || || || | |||||||||||||    
T  21632995 ttcacttttggtccctcctttcatcaagtcaacagaatctgcata 21633039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 35996054 - 35995913
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||         | ||||| |||||| | ||||||||| |||||    
T  35996054 agggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgta---aaaaaaaattagaatttgtctcagtaatttcagattct 35995958  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||| || || || ||  ||||||||||||||    
T  35995957 tccacttttggtcccttctttcatcacgtccgcagaatctgcata 35995913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 45058869 - 45058731
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||| |||| ||| ||| || |||||||||||||||   ||||||||||| |||        ||||||||||||||| ||||||||||| |||||    
T  45058869 agggtaaatgcctccttttgtctctttaatattagcgaattctagttttagtccccgta-aaaaagagatttagattttgtctctgtaatttcagattct 45058771  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatct 215  Q
    |||| ||||| |||||||||||||||||||||| ||||||    
T  45058770 tccatttttgatcccttattccaccatgtaagccgaatct 45058731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 27946114 - 27946166
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 27946166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 15328463 - 15328603
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||         | |||||||||||||||||||||||||||||||    
T  15328463 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgta---aaaaaaaattagattttgtccctgtaatttcatattctt 15328559  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||| |||  ||||||  || || || || | |||||||||||||    
T  15328560 ccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 15328603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 17465746 - 17465631
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||||         ||||| ||||||||||||||| || | |||||    
T  17465746 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattct 17465647  T
Q  176 tccacttttggtccct 191  Q
    | ||||||||||||||    
T  17465646 ttcacttttggtccct 17465631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 27946244 - 27946186
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgta 27946186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 36991038 - 36990924
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||        | |||||||| |||||||||||||| | |||||    
T  36991038 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattct 36990940  T
Q  176 tccacttttggtccct 191  Q
    ||||||||| ||||||    
T  36990939 tccacttttagtccct 36990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 37016478 - 37016364
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||        | |||||||| |||||||||||||| | |||||    
T  37016478 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattct 37016380  T
Q  176 tccacttttggtccct 191  Q
    ||||||||| ||||||    
T  37016379 tccacttttagtccct 37016364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 17649384 - 17649277
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||||| |||| |        ||||||||||||||||||||||||||| ||| |||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctgga-aaaaaaagatttagattttgtccctgtaatttcagattattcca 17649286  T
Q  180 cttttggtc 188  Q
    | |||||||    
T  17649285 catttggtc 17649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 38283553 - 38283693
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    |||||| |||||||| |||||||||||||| |||||| |||||||||||| ||||         ||||||||||||| ||| |||||||||||| |||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttcca 38283652  T
Q  180 cttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||| |||||  || || || || |||||||||| ||||    
T  38283653 cttttgatccctcctttcatcacgtcagcagaatctacata 38283693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 273
Target Start/End: Complemental strand, 35995878 - 35995756
Alignment:
Q  151 ttttgtccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaa 246  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||  ||    |||||| ||||| ||||| ||| ||    ||  ||||||||||||||    
T  35995878 ttttgtccctgtaatttcatgttcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgtg----gtggaatgagggaccaaa 35995783  T
Q  247 agtggaggaatctgaaattacagggac 273  Q
    |||||| ||||||||||||||||||||    
T  35995782 agtggaagaatctgaaattacagggac 35995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 35740829 - 35740929
Alignment:
Q  89 cttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtc 188  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |||          ||||||||||||||||||||||| | |||||||||||||| |||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag--tttagattttgtccctgtaattttaaattcttccacttttagtc 35740926  T
Q  189 cct 191  Q
    |||    
T  35740927 cct 35740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 3424773 - 3424831
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||| ||||||||||||||||||| || ||||||| |||||||||    
T  3424773 agggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgta 3424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 3426027 - 3425973
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 130  Q
    ||||| |||||||||||| | |||||||||||||||||||| |||||||||||||    
T  3426027 agggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 35741963 - 35741905
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||| ||||| |||||||||||||||||||||| | |||||||||||||||    
T  35741963 agggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgta 35741905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 4204827 - 4204786
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacagggac 4204786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 43572650 - 43572691
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacagggac 43572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 16722173 - 16722291
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    ||||||||||||||| |||| |||||||||||||||| |||  ||    |||||| ||||| ||||| ||||||    ||  ||| ||||||||||||||    
T  16722173 gtccctgtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacatg----gtggaataagggaccaaaagtg 16722268  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || |||| |||||||||||||||    
T  16722269 gaagaatatgaaattacagggac 16722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 21633156 - 21633196
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggac 21633196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 24490298 - 24490242
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctg 132  Q
    |||||||||| || ||||| ||||||||||||||| ||||| |||||||||||||||    
T  24490298 agggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 47575650 - 47575507
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||| |||||| | ||||||| || |||||  ||||||||||||||||         ||| |||||||||| ||||||||||| ||| |    
T  47575650 agggtaaatacctctattcgtctccgtaatatgagtgaattctggttttagtccctgtaaaaaaaaaaatt-agattttgtctctgtaatttcagatttt 47575552  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    || |||||||||| ||  || || || || |||||||||||||||    
T  47575551 tcaacttttggtctctcctttcatcacgtcagcagaatctgcata 47575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 32998511 - 32998371
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||  |||| ||||||||||||||||||||||  ||| ||||| ||||||          |||||||| |||||||||||||||| ||||     
T  32998511 agggttaataccatttttggtccctgtaatattagcgaattctggtgttagttcctgtaaaaaaaag--tttagattctgtccctgtaatttcagattcc 32998414  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    ||||||||| ||||||  ||  ||||||| |||||||| ||||    
T  32998413 tccacttttagtccctcgtttaaccatgtcagcagaatttgca 32998371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 1069026 - 1068913
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| |||||||||||| ||| ||| |||||||| ||||||||||||  |||| ||||        | |||| ||||||||||||| |||||| ||||||    
T  1069026 gggttaatacctcttttggtctctgcaatattagtgaatttcggtttaggtccttgtaaaaaaaaagtttta-attttgtccctgtcatttcagattctt 1068928  T
Q  177 ccacttttggtccct 191  Q
    |||||||| ||||||    
T  1068927 ccacttttagtccct 1068913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 20853959 - 20853996
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20853959 gagggaccaaaagtggaagaatctgaaattacagggac 20853996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 32998397 - 32998434
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  32998397 gagggactaaaagtggaggaatctgaaattacagggac 32998434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 43572504 - 43572467
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43572504 gagggaccaaaagtggaagaatctgaaattacagggac 43572467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 9267093 - 9267053
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggac 9267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 14262150 - 14262114
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggac 14262114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 11003943 - 11003912
Alignment:
Q  244 aaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||||||||||||||    
T  11003943 aaaagtggaggaatctgaaattacagggacca 11003912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 273
Target Start/End: Original strand, 45003679 - 45003796
Alignment:
Q  156 tccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgg 251  Q
    ||||||||||||||||||| |||||||||| ||||| |||  ||    |||||| ||||| ||||| ||| ||    ||  |||||||||||||||||||    
T  45003679 tccctgtaatttcatattcctccacttttgatccctcattttacatgccatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaagtgg 45003774  T
Q  252 aggaatctgaaattacagggac 273  Q
    | |||| |||||||| ||||||    
T  45003775 aagaatatgaaattatagggac 45003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 49986710 - 49986823
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttatt----ccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    ||||||||||||||| |||| |||||||||||||||| |||      |||||||| ||||| ||||| ||| ||    ||  ||||||||||||||||||    
T  49986710 gtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaagtg 49986805  T
Q  251 gaggaatctgaaattaca 268  Q
    || |||| ||||||||||    
T  49986806 gaagaatatgaaattaca 49986823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 11003919 - 11003882
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11003919 agggaccaaaagtgggaggaatctgaaattacagggac 11003882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 14161986 - 14161949
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  14161986 gagggaccaaaagtggaagaatatgaaattacagggac 14161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 15328647 - 15328610
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15328647 agggaccaaaagtgggaggaatctgaaattacagggac 15328610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 17465561 - 17465528
Alignment:
Q  158 cctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||||| ||||||||||||||||    
T  17465561 cctgtaatttcatattcctccacttttggtccct 17465528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 21633011 - 21632974
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  21633011 gagggaccaaaagtgaaagaatctgaaattacagggac 21632974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 33372521 - 33372484
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||  |||||||||||||||||||    
T  33372521 gagggaccaaaagtggaataatctgaaattacagggac 33372484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 45003611 - 45003574
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  45003611 gagggacaaaaagtggaagaatctgaaattacagggac 45003574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 45970102 - 45970065
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  45970102 agggaccaaaagtgggaggaatctgaaattacagggac 45970065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 14162135 - 14162171
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggac 14162171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 14171704 - 14171664
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  14171704 aatgagggatcaaaagtggaagaatttgaaattacagggac 14171664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 15328724 - 15328760
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||  |||||||||||||||||||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggac 15328760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 16722105 - 16722069
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  16722105 agggaccaaaagtggaagaatctgaaattacatggac 16722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 19113028 - 19113064
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||||| || |||||||||||||||||||    
T  19113028 gagggaccaaaagtagaagaatctgaaattacaggga 19113064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 20853814 - 20853774
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||| ||||||    
T  20853814 aatgagggaccaaaagtggaagaatatgaaattatagggac 20853774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 30500155 - 30500119
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggac 30500119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 38283728 - 38283768
Alignment:
Q  151 ttttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  38283728 ttttgtccgtgtaatttcaaattcctccacttttggtccct 38283768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 45970183 - 45970215
Alignment:
Q  241 accaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||| ||||||||||||||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggac 45970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 47575472 - 47575432
Alignment:
Q  151 ttttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  47575472 ttttgtccctgtaatttcaaattcctccacttttgatccct 47575432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 52552806 - 52552770
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggac 52552770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 23705039 - 23704841
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  23705039 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcatattct 23704941  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23704940 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 23704841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 20419536 - 20419734
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 20419635  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||| ||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20419636 ccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggacca 20419734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 76 - 273
Target Start/End: Original strand, 25772363 - 25772559
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||        |||||||||||||||| ||||||||||||||||    
T  25772363 agggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgta-aaaaaaagatttagattttgtccttgtaatttcatattct 25772461  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  25772462 tccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 25772559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 20458691 - 20458889
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||         |||||||||||||| ||||||||||| |||||    
T  20458691 agggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagattct 20458789  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20458790 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacca 20458889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 78 - 275
Target Start/End: Original strand, 44816832 - 44817033
Alignment:
Q  78 ggtaaatacctcttttc--gtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn--gatttagattttgtccctgtaatttcatatt 173  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||          ||||| ||||||||||||||||||||| |||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagatt 44816931  T
Q  174 cttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44816932 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 44817031  T
Q  274 ca 275  Q
    ||    
T  44817032 ca 44817033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 41599958 - 41600156
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||         |||||||||||||||||||||||||| ||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattctt 41600057  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||| |||| ||||| ||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41600058 ccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggacca 41600156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 12006540 - 12006738
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||         ||| |||||||||||||||||||||| |||||    
T  12006540 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattct 12006638  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| ||||| ||||||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  12006639 tccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagtgacca 12006738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 38879723 - 38879922
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||         |||||||||||||||||||||||||||||||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||||||  |||||||||||||||||| || |||||    
T  38879823 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaattatagagacca 38879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 23383499 - 23383698
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||| |||||||||||| ||||| |||||||||||||| ||         |||||||||||||||||| ||||||||||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattct 23383598  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||| |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  23383599 tccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacaaggacca 23383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 48672276 - 48672477
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn--gatttagattttgtccctgtaatttcatatt 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||          ||||||||||| ||| ||||||||||| |||    
T  48672276 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagatt 48672375  T
Q  174 cttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||| ||||| ||||||||| || ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||    
T  48672376 cttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggac 48672475  T
Q  274 ca 275  Q
    ||    
T  48672476 ca 48672477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 10409752 - 10409554
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||        ||||||||||||||| ||||||||| | |||||    
T  10409752 agggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgta-aaaaaaagatttagattttgtctctgtaattttagattct 10409654  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| ||||| ||||||||| || ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  10409653 tccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggacca 10409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 78 - 273
Target Start/End: Original strand, 48648263 - 48648457
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||        ||||||||||||||||||||||||||| ||| ||     
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgta-agaaaaagatttagattttgtccctgtaatttcagatttttt 48648361  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    || ||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  48648362 catttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 20963494 - 20963693
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||| || ||||||||||||||||||||| |||||   |||||||||||||||         ||||||||||| ||||||||||||| | |||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  20963594 tccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaagaatatgaaattacaaggacca 20963693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 24195142 - 24194971
Alignment:
Q  109 agcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagc 208  Q
    |||||| | |||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||    
T  24195142 agcgaaatccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagc 24195043  T
Q  209 agaatctgcatacatgacacgtaaa-----atgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||| |||||||     ||||||||||||||||||||||||||||||||| ||||||||    
T  24195042 agaatctgcatacatgatacgtaaaatgaaatgagggaccaaaagtggaggaatctgaaattatagggacca 24194971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 28218177 - 28218321
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||         ||||||||||||||||||||||||||| ||||    
T  28218177 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 28218276  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcat 219  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||    
T  28218277 ttccacttttggtccctcattccaccacgtcagcagaatctgcat 28218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 78 - 272
Target Start/End: Original strand, 31851242 - 31851434
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||||||| ||||||         ||||||||| ||||  |||||||||||||| |||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaaaaa--atttagattctgtcattgtaatttcatatttttc 31851339  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||| || ||  || ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  31851340 cacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaaattacaggga 31851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 33162915 - 33162715
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||         ||||| |||| ||||  |||||||||| ||||    
T  33162915 agggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtccttataaaaaaaaaagatttggattatgtcattgtaatttcaaattc 33162816  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    |||||||||| |||  | ||| ||||| || ||||||||||||||||||| ||| ||||||||||||||||||||| || |||||||||||||| |||||    
T  33162815 ttccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaaattacacggacc 33162716  T
Q  275 a 275  Q
    |    
T  33162715 a 33162715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 28218542 - 28218427
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  28218542 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 28218443  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  28218442 tccacttttggtccct 28218427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 77 - 219
Target Start/End: Original strand, 16995200 - 16995341
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||         |||||||||||||||||||||||||| ||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattctt 16995298  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcat 219  Q
    ||||||||||||||  ||||||||| || ||||||||||||||    
T  16995299 ccacttttggtcccacattccaccacgtcagcagaatctgcat 16995341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 41600337 - 41600222
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  41600337 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 41600238  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  41600237 tccacttttggtccct 41600222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 48672658 - 48672543
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||| |||||    
T  48672658 agggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattct 48672559  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  48672558 tccacttttggtccct 48672543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 266
Target Start/End: Original strand, 7657972 - 7658159
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn--gatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||          |||||||||| ||||| |||||||||| ||||||     
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctta 7658071  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatta 266  Q
    |||||||||||| |  || || || || |||| ||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||    
T  7658072 cacttttggtccatcctttcatcacgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaaaagtagatgaatctgaaatta 7658159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 12006919 - 12006804
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  12006919 agggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 12006820  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  12006819 tccacttttggtccct 12006804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 23383879 - 23383735
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||| |||||  | |||||||||||| |        |||||||||||||||||||||||||||||||||    
T  23383879 agggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattct 23383780  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||| ||||||||||  || || || || | |||||||||||||    
T  23383779 tccacctttggtccctcctttcatcaagtcaacagaatctgcata 23383735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 23704662 - 23704775
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||        |||||| |||||||||||||||||||| ||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgta-aaaaaaagatttacattttgtccctgtaatttcagattctt 23704760  T
Q  177 ccacttttggtccct 191  Q
    |||||||||||||||    
T  23704761 ccacttttggtccct 23704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 25772710 - 25772566
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||| ||||||||| ||||| | |||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  25772710 agggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 25772611  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    || |||||||||||||  || || || || | |||||||||||||    
T  25772610 tctacttttggtccctcctttcatcaagtcaacagaatctgcata 25772566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 1250580 - 1250441
Alignment:
Q  81 aaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccac 180  Q
    ||||| |||||||||||| ||||||||||||||||| | ||||||||| |||||        |||||||||||||||||| |||||||||||||||||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccac 1250481  T
Q  181 ttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||  || || || || || ||||||||||||    
T  1250480 ttttggtccctcctttcatcacgtcagaagaatctgcata 1250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 20419915 - 20419800
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |        ||||||||||||||||||||||||||| |||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 20419816  T
Q  176 tccacttttggtccct 191  Q
    || |||||||||||||    
T  20419815 tctacttttggtccct 20419800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 20459069 - 20458955
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||        ||||||||||||||| ||||||||||| |||||    
T  20459069 agggtaaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattct 20458971  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  20458970 tccacttttggtccct 20458955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 275
Target Start/End: Original strand, 1250207 - 1250404
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    |||||||| ||||||||||| ||  |||||||| ||||||  |||||| ||| ||||         ||||| ||||||||| | |||||| | |||||||    
T  1250207 ggtaaatatctcttttcgtctctaaaatattagtgaattttagttttaatccttgtaaaaaaaattatttaaattttgtccttttaattttagattcttc 1250306  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||| || ||||||||| || ||| ||||||||||||||| || ||||||||| |||  |||||||||||||| || |||||||| |||||    
T  1250307 cacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatggaattacagtgacca 1250404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 20963872 - 20963760
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||         |||||||||| ||||||||||||||| |||||    
T  20963872 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta-aaaataaaatttagatttagtccctgtaatttcagattct 20963774  T
Q  176 tccacttttggtcc 189  Q
    | ||||||||||||    
T  20963773 ttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 38880099 - 38879959
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||  | ||         |||||||||||||||||||||||||| ||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc--tttaaaaaaaaa-atttagattttgtccctgtaatttcagattctt 38880003  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  || ||||| || | |||||||||||||    
T  38880002 ccacttttggtccctcctttcaccaagtcaacagaatctgcata 38879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 6465855 - 6465997
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||         ||||||||| ||| | |||||||||| ||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgta-aaaaaaatatttagattatgttcttgtaatttcagattctt 6465953  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  || || || || || ||||||||||||    
T  6465954 ccacttttggtccctcctttcatcacgtcagaagaatctgcata 6465997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 7658342 - 7658236
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||         |   |||||||||||||||||||| | |||||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgta----aaaaaaaaaagattttgtccctgtaatttaagattcttc 7658247  T
Q  178 cacttttggtc 188  Q
    |||||||||||    
T  7658246 cacttttggtc 7658236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 31852209 - 31852157
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 128  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31852209 agggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 220
Target Start/End: Complemental strand, 48648603 - 48648464
Alignment:
Q  79 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcc 178  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||| || ||        |||||||||||||||  |||||||| | ||||||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctata--aaaaaagatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||| ||||||||  || || || || | |||||||||||||    
T  48648505 acttctggtccctcctttcatcacgtcaacagaatctgcata 48648464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 31851548 - 31851506
Alignment:
Q  146 ttagattttgtccctgtaatttcatattcttccacttttggtc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 129  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 6466184 - 6466126
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||| ||||||| ||  |||||||||||||||||||||||||||||| |||||    
T  6466184 agggtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgta 6466126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 14801033 - 14800931
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| ||||||| |||| || |||||||||| ||||||||||||||||||||||||||          |||||||||||||||||| |||||| ||||||    
T  14801033 gggttaatacctttttt-gttcctgtaatatgagcgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattctt 14800935  T
Q  177 ccac 180  Q
    ||||    
T  14800934 ccac 14800931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 15248025 - 15247923
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| ||||||| |||| || |||||||||| ||||||||||||||||||||||||||          |||||||||||||||||| |||||| ||||||    
T  15248025 gggttaatacctttttt-gttcctgtaatatgagcgaatttcggttttagtccctgtaaaaaaaaaagtttagattttgtccctgtcatttcagattctt 15247927  T
Q  177 ccac 180  Q
    ||||    
T  15247926 ccac 15247923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 28218320 - 28218361
Alignment:
Q  234 atgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  28218320 atgagggaccaaaagtggagtaatctgaaattacagggacca 28218361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 20419732 - 20419614
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttatt----ccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    |||||||||||||||||||| |||||||||||||||| |||      |||||||| ||||| ||||| ||| ||    ||  ||||||||||||||| ||    
T  20419732 gtccctgtaatttcatattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaaatg 20419637  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || |||| |||||||||||||||    
T  20419636 gaagaatatgaaattacagggac 20419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 23704843 - 23704961
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    ||||||||||||||| |||| |||||||||||||||| |||  ||    |||||| ||||| ||||| ||| ||    ||  ||||||||||||||||||    
T  23704843 gtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaagtg 23704938  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || |||| |||||||||||||||    
T  23704939 gaagaatatgaaattacagggac 23704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 28218297 - 28218257
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggac 28218257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 44816953 - 44816913
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 14647029 - 14646971
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| ||||||  |||| ||||||||||||| |||||||| |||||||||||||||||    
T  14647029 agggttaataccctttttagtccctgtaatatgagcgaattccggttttagtccctgta 14646971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 33131632 - 33131747
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| | ||| ||||||||||||| ||||| || |||||||||||||||||         ||||||||| ||||||| | |||||| |||||    
T  33131632 agggttaataccccctttggtccctgtaatatgagcgatttccggttttagtccctgtaaataaaaaaatttagattctgtccctatcatttcagattct 33131731  T
Q  176 tccacttttggtccct 191  Q
    ||| |||||| |||||    
T  33131732 tccgcttttgctccct 33131747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 10409440 - 10409489
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtccctt 192  Q
    |||||||||||||||| |||||||||| ||||||| |||||| |||||||    
T  10409440 gatttagattttgtccttgtaatttcagattcttctacttttagtccctt 10409489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 12006803 - 12006840
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12006803 gagggaccaaaagtggaagaatctgaaattacagggac 12006840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 23704776 - 23704739
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  23704776 gagggaccaaaagtggaagaatctgaaattacagggac 23704739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 24194929 - 24194978
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttc-cacttttggtccct 191  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  24194929 gatttagattttgtccctgtaatttcagattcctctcacttttggtccct 24194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 28218426 - 28218463
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28218426 gagggaccaaaagtggaagaatctgaaattacagggac 28218463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 38879987 - 38880024
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  38879987 gagggaccaaaagtggaagaatctgaaattacagggac 38880024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 41600221 - 41600258
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  41600221 gagggaccaaaagtggaagaatctgaaattacagggac 41600258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 6466077 - 6466037
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacaggga 6466037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 12006658 - 12006618
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  12006658 aatgagggatcaaaagtggaagaatctgaaattacagggac 12006618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 16995317 - 16995277
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  16995317 aatgtgggaccaaaagtggaagaatctgaaattacagggac 16995277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 20458809 - 20458773
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20458809 aatgagggaccaaaagtggaagaatctgaaattacag 20458773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 20963613 - 20963573
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  20963613 aatgagggaccaaaagtggaagaatctaaaattacagggac 20963573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 20963691 - 20963655
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20963691 gtccttgtaatttcatattcttccacttttggtccct 20963655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 23258297 - 23258245
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| ||||||| ||| |||||||||||||||||| ||||||| |||||||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgta 23258245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 38879842 - 38879802
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  38879842 aatgagggaccaaaagtggaagaatatgaaattacagggac 38879802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 48672542 - 48672578
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||||||||||||||||| |||||||||||||||||||    
T  48672542 gagggaccaaaagtggaagaatctgaaattacaggga 48672578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 44817142 - 44817099
Alignment:
Q  148 agattttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccct 44817099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 10693988 - 10693946
Alignment:
Q  6 gatagtttttcagttcttgttcaataactgcacctatccctta 48  Q
    ||||||||||||| |||| |||||||| |||||||||||||||    
T  10693988 gatagtttttcagctcttcttcaataattgcacctatccctta 10693946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 7842546 - 7842517
Alignment:
Q  244 aaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||||||||||||    
T  7842546 aaaagtggaggaatctgaaattacagggac 7842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 20419799 - 20419836
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| || ||||||||||||||||||||    
T  20419799 gagggaccaaaagtagaagaatctgaaattacagggac 20419836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 269
Target Start/End: Original strand, 20458954 - 20458987
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacag 269  Q
    ||||||||||||||||| ||||||||||||||||    
T  20458954 gagggaccaaaagtggaagaatctgaaattacag 20458987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 24194978 - 24194941
Alignment:
Q  237 agggaccaaaagtg-gaggaatctgaaattacagggac 273  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24194978 agggaccaaaagtgagaggaatctgaaattacagggac 24194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 25772594 - 25772631
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| || ||||||||||||||||||||    
T  25772594 gagggaccaaaagtagaagaatctgaaattacagggac 25772631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 28218354 - 28218391
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  28218354 agggaccaaaagtgggaggaatctgaaattacagggac 28218391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 6465969 - 6465937
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattaca 268  Q
    ||||||||||||||||| |||||||||||||||    
T  6465969 gagggaccaaaagtggaagaatctgaaattaca 6465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 272
Target Start/End: Complemental strand, 23704848 - 23704812
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacaggga 272  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23704848 agggaccaaaagtgggaggaatctgaaattacaggga 23704812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 24195056 - 24195096
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 41600076 - 41600036
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||| ||||| ||||||||||||||||||||    
T  41600076 aatgagggatcaaatgtggaagaatctgaaattacagggac 41600036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 48672397 - 48672361
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  48672397 aatgagggatcaaaagtggaagaatctgaaattacag 48672361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 18500314 - 18500513
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  18500314 agggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgta-agaaaaagatttagattttgtccctgtaatttcatattct 18500412  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatct-gaaattacagggacc 274  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  18500413 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctaaaaattacagggacc 18500512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 26385278 - 26385476
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||        ||||||||||||||||||||||||| ||||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattctt 26385377  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26385378 ccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 26385476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 24732316 - 24732118
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||        |||||||||||||||| ||||||||||||||||    
T  24732316 agggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattct 24732218  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24732217 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggacca 24732118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 33714494 - 33714685
Alignment:
Q  88 tcttttcgtccctgtaatattagcgaatttcggtttta--gtccctgtacnnnnnnn--gatttagattttgtccctgtaatttcatattcttccacttt 183  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||||          |||||||||||||||| ||||||||||||||||||||||||    
T  33714494 tcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttt 33714593  T
Q  184 tggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33714594 tggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagagacca 33714685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 87 - 272
Target Start/End: Original strand, 32017550 - 32017731
Alignment:
Q  87 ctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttgg 186  Q
    ||||||| |||| ||| |||||||||||||||| |||||||| |||||         |||||||||||||   |||||||||| ||||||||||||||||    
T  32017550 ctctttttgtccatgtgatattagcgaatttcgattttagtctctgtaaaaaaac--atttagattttgtt--tgtaatttcagattcttccacttttgg 32017645  T
Q  187 tcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32017646 tcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 32017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 76 - 273
Target Start/End: Complemental strand, 33637896 - 33637709
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||  ||||           |||||||| |||||||||||||||||||||    
T  33637896 agggtaaatacctcttttcatctttgtaatattaccgaatttcggttttagtctgtgtaa----------ttagattt-gtccctgtaatttcatattct 33637808  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    | |||||||| ||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33637807 ttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 30618326 - 30618147
Alignment:
Q  91 tttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnng-atttagattttgtccctgtaatttcatattcttccacttttggtcc 189  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||          |||||||||||||||||||||||| | |||||||||||||| |||     
T  30618326 tttcgtccctctaatattagcgaatttcgattttagttcttgtaaaaaaaaaatatttagattttgtccctgtaattttagattcttccactttttgtct 30618227  T
Q  190 cttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  30618226 cttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacag 30618147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 9481494 - 9481362
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggac 242  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||| ||| |||||||||| |||| ||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggac 9481395  T
Q  243 caaaagtggaggaatctgaaattacagggacca 275  Q
     |||| ||||||||| |||||||||||||||||    
T  9481394 aaaaaatggaggaatttgaaattacagggacca 9481362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 30458903 - 30459099
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattcttcc 178  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| || |||         |||||||||| |||| ||||||||||| |||||||     
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattcttca 30459002  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||| ||| || ||| ||||| || ||||||||||||||||||||||||||||||||| || |||||||| |  |||||||||||||| ||||||    
T  30459003 acttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaaattacaaggacca 30459099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 9481182 - 9481325
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||| |||||||||||||||||||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||| |||||||||||  || || || || |||||||||||||||    
T  9481282 ccaattttggtccctcctttcatcacgtcagcagaatctgcata 9481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 275
Target Start/End: Original strand, 14680949 - 14681080
Alignment:
Q  144 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggacc 243  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| | ||| ||||| || ||||||||||||||||||||||||| ||| ||| ||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagacc 14681048  T
Q  244 aaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| |||||||||||| | ||||||    
T  14681049 aaaagtggagaaatctgaaattatatggacca 14681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 32017882 - 32017768
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  32017882 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcatattct 32017784  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  32017783 tccacttttggtccct 32017768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 275
Target Start/End: Original strand, 2299389 - 2299508
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagg 254  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||| ||    
T  2299389 gtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcgg 2299487  T
Q  255 aatctgaaattacagggacca 275  Q
    ||||| |||||||| ||||||    
T  2299488 aatctaaaattacaaggacca 2299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 268
Target Start/End: Original strand, 10321737 - 10321922
Alignment:
Q  81 aaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccac 180  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| |           ||||||| | ||||||||||||||||||||| |||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaata---ttagattatatccctgtaatttcatattcttacac 10321833  T
Q  181 ttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggac-caaaagtggaggaatctgaaattaca 268  Q
    ||||| ||||| ||| ||||| || ||||| ||||||||||||| |||||||||| |||| |  |||| ||||| ||||||||||||||    
T  10321834 ttttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaatctgaaattaca 10321922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 26385649 - 26385541
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||        ||||||||| |||| |||| |||||||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  180 cttttggtc 188  Q
    |||||||||    
T  26385549 cttttggtc 26385541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 9854264 - 9854118
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||  ||||| ||||||||||||||||||||||  ||||||||||  ||||         ||||||||||||||| ||||||||||||||||    
T  9854264 agggttaatactgctttttgtccctgtaatattagcgaattctggttttagtc--tgtaaaaataataatttagattttgtccttgtaatttcatattct 9854167  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatg 224  Q
    |||||||||||||||| ||| ||||| || |||| ||||||||||||||    
T  9854166 tccacttttggtccctcatttcaccacgtcagcaaaatctgcatacatg 9854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 19284130 - 19284243
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||||||||||||| | ||||||||||||||||| | ||||||||||  |||        ||||||||||||||||||||||||||| |||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  178 cacttttggtccct 191  Q
    ||||||||||||||    
T  19284230 cacttttggtccct 19284243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 24731934 - 24732052
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt---acnnnnnnngatttagattttgtccctgtaatttcatat 172  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   |         | |||||||||||||||||||||||| ||    
T  24731934 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagat 24732033  T
Q  173 tcttccacttttggtccct 191  Q
    ||||| |||||||||||||    
T  24732034 tcttctacttttggtccct 24732052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 3229992 - 3230061
Alignment:
Q  206 agcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||    
T  3229992 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggacca 3230061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 9154884 - 9154990
Alignment:
Q  82 aatacctcttttcgtccctgtaatatt-agcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccac 180  Q
    ||||||||||||| ||||||||||||| |||||||| || ||||||||||||||        ||||||||||||||||||||||||||| |||||||||     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  181 ttttggt 187  Q
    |||||||    
T  9154984 ttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18500708 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 30617966 - 30618105
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||| |||||  | ||||||||| |  |         |||||||||||||||||||||||||||||| |    
T  30617966 agggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctttaaaaaa-----atttagattttgtccctgtaatttcatattgt 30618060  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  ||  | || || |||||||||||||||    
T  30618061 tccacttttggtccctccttttatcacgtcagcagaatctgcata 30618105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 3230217 - 3230129
Alignment:
Q  100 tgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtc 188  Q
    ||||||||||||||||| || ||||||||||||||        |||||||||||||||| | ||||||||||||||| |||||||||||    
T  3230217 tgtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctttcacttttggtc 3230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 2299692 - 2299635
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 133  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||| |||||    
T  2299692 agggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 34884558 - 34884614
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  34884558 ggtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgta 34884614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 17142798 - 17142836
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggacca 17142836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 14681247 - 14681142
Alignment:
Q  90 ttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcc 189  Q
    |||| ||||||||||||||||||||||| || ||||||| |||||         ||||||| ||||||| || ||||| | |||| ||||||||||||||    
T  14681247 ttttggtccctgtaatattagcgaattttggctttagtctctgtaaaataaaatatttagactttgtccttgcaattttagattcctccacttttggtcc 14681148  T
Q  190 cttatt 195  Q
    ||||||    
T  14681147 cttatt 14681142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 17142744 - 17142788
Alignment:
Q  144 atttagattttgtccctgtaatttcatattcttccacttttggtc 188  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtc 17142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 34113630 - 34113591
Alignment:
Q  90 ttttcgtccctgtaatattagcgaatttcggttttagtcc 129  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  34113630 ttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 2299339 - 2299397
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||||||||  | ||||||||  ||||||||||||||||| |||||||||||||||||    
T  2299339 agggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgta 2299397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 30459267 - 30459229
Alignment:
Q  87 ctcttttcgtccctgtaatattagcgaatttcggtttta 125  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  30459267 ctcttttcgttcctgtaatattagcgaatttcggtttta 30459229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 2299617 - 2299580
Alignment:
Q  147 tagattttgtccctgtaatttcatattcttccactttt 184  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttt 2299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 19284244 - 19284207
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  19284244 gagggaccaaaagtggaagaatctgaaattacagggac 19284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 21069514 - 21069571
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| ||||||  |||| ||||||||||||| |||||||| |||||||||||||||||    
T  21069514 gggttaatacccattttagtccctgtaatatgagcgaattccggttttagtccctgta 21069571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 33637625 - 33637702
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||| | |||||||| | |||||||||||||||||||||  || ||  | || |||||||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcata 33637702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 18500432 - 18500392
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  18500432 aatgagggaccaaaagtggaagaatatgaaattacagggac 18500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 10322032 - 10321966
Alignment:
Q  154 tgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||| |||||| |||||||||||| |  || || || || |||||||||||||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcata 10321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 17142829 - 17142867
Alignment:
Q  237 agggaccaaaagtg-gaggaatctgaaattacagggacc 274  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  17142829 agggaccaaaagtgagaggaatctgaaattacagggacc 17142867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 21070916 - 21070858
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||| ||||| ||||||||||||| |||||||| |||| |||||| |||||    
T  21070916 agggttaataccccttttagtccctgtaatatgagcgaattccggtattagtctctgta 21070858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 9854146 - 9854187
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  9854146 aaatgagggaccaaaagtggaagaatatgaaattacaaggac 9854187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 24732053 - 24732016
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| || ||||||||||||||||||||    
T  24732053 gagggaccaaaagtagaagaatctgaaattacagggac 24732016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 32017767 - 32017804
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  32017767 gagggaccaaaagtggaagaatatgaaattacagggac 32017804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 3230059 - 3230023
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  3230059 gtccttgtaatttcatattcctccacttttggtccct 3230023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 9481446 - 9481482
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggac 9481482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 17142834 - 17142798
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  17142834 gtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 24732198 - 24732238
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24732198 aatgagggaccaaaagtggaagaatatgaaattacatggac 24732238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 26385396 - 26385356
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  26385396 aatgagggaccaaaagtggaagaatataaaattacagggac 26385356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 26385474 - 26385438
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26385474 gtccctgtaatttcagattcctccacttttggtccct 26385438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 33714605 - 33714565
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  33714605 aatgagggaccaaaagtggaagaatatgaaattacaaggac 33714565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 10108749 - 10108550
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  10108749 agggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 10108650  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10108649 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggacca 10108550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 5555248 - 5555049
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||    
T  5555248 agggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 5555149  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  5555148 tccacttttggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagtgaaggaattcgaaattacagggacca 5555049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 43851665 - 43851862
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta-aacaaaagatttagattttgtccctgtaatttcagattctt 43851763  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||| ||||| |||||||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  43851764 ccacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggacca 43851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 14820673 - 14820477
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  14820673 agggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 14820574  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||| ||||    
T  14820573 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagtagaggaatttgagattacgggga 14820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 76 - 273
Target Start/End: Complemental strand, 7689902 - 7689705
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||        |||||| |||||||||||||||||||| |||||    
T  7689902 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattct 7689803  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||| ||||| ||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7689802 tccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggac 7689705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 76 - 266
Target Start/End: Original strand, 21147935 - 21148126
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||         ||||||||||||||||||||||||||| ||||    
T  21147935 agggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 21148034  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatta 266  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  21148035 ttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggaggaatttgaaatta 21148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 17622889 - 17623085
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||        |||||||||||||| | |||||||| | |||||    
T  17622889 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgta--aaaaaagatttagattttgttc-tgtaattttagattct 17622985  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17622986 tccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 17623085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 42606132 - 42605933
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| ||||||| ||||||||||||||||||||||  ||||||||||  ||||        ||||||||||||||||| ||||||||| |||||    
T  42606132 agggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattct 42606033  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42606032 tccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagcgacca 42605933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 14767505 - 14767705
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||  ||         ||||||||||||||||||||||||||| |||     
T  14767505 agggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagattt 14767604  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  14767605 ttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggacc 14767704  T
Q  275 a 275  Q
    |    
T  14767705 a 14767705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 26137063 - 26136865
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccct-gtacnnnnnnngatttagattttgtccctgtaatttcatattc 174  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| |||         | |||||||||||||||||||||||| ||||    
T  26137063 agggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaa--aattagattttgtccctgtaatttcagattc 26136966  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  26136965 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaagtacaaggacc 26136866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 81 - 275
Target Start/End: Complemental strand, 22494757 - 22494564
Alignment:
Q  81 aaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccac 180  Q
    |||||||||| |||||||||||||||| || |||||  ||||||||| || |||        |||||||| |||||||||||||||||| ||||||||||    
T  22494757 aaatacctctcttcgtccctgtaatatcagtgaattctggttttagttcc-gtaaaaaaagagatttagaatttgtccctgtaatttcaaattcttccac 22494659  T
Q  181 ttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22494658 ttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattactgggacca 22494564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 85 - 275
Target Start/End: Original strand, 42112993 - 42113182
Alignment:
Q  85 acctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccactttt 184  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||        |||||||||| |||||||||||||| | |||||| |||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgta-aaaaaaagatttagattatgtccctgtaatttaagattctttcactttt 42113091  T
Q  185 ggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||| ||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||    
T  42113092 ggtccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaattatagggacca 42113182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 30789519 - 30789705
Alignment:
Q  88 tcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggt 187  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||        ||||||||||||||| ||||||||||| |||| |||||||||| |    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgta-aaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgat 30789617  T
Q  188 cccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||| ||| ||||| || |||| |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  30789618 ccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagtggaggaatctgaaattacaaggacca 30789705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 26532781 - 26532981
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    |||||||||||||| |||| |   | ||||||||||||||| |||||||||||| ||||         ||||||||||||||||||||||||||| |||     
T  26532781 agggtaaatacctcatttcatatatataatattagcgaattccggttttagtccatgtaaaaaaaaaagatttagattttgtccctgtaatttcaaattt 26532880  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||    
T  26532881 ttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggattaaaagtggaggaatctgaaattataggaacc 26532980  T
Q  275 a 275  Q
    |    
T  26532981 a 26532981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 10108369 - 10108513
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  10108369 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 10108468  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  || || || || |||||||||||||||    
T  10108469 tccacttttggtccctcctttcatcacgtcagcagaatctgcata 10108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 2583700 - 2583500
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    |||||||||| ||||||||||||  ||||||||||||||||   ||||||| |||||||         |||||| ||||||||||| |||||||| ||||    
T  2583700 agggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattc 2583601  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||| ||| |||||||||  | ||| ||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||    
T  2583600 ttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggaggaatttgaaattacagggacc 2583501  T
Q  275 a 275  Q
    |    
T  2583500 a 2583500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 5554868 - 5555012
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||| ||||||||||||| ||||||||||||||    
T  5554868 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattct 5554967  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||| || || || || |||||||||||||||    
T  5554968 tccacttttggtcccttctttcatcacgtcagcagaatctgcata 5555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 10171522 - 10171383
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||         |||||||||||||||||||||||| | |||||    
T  10171522 agggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattct 10171423  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatct 215  Q
    | |||||||||||||| |||||| ||||| ||||||||||    
T  10171422 ttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 14820295 - 14820437
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgta-aaaaaaagatttagattttgtccctgtaatttcatattctt 14820393  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  || || ||  | |||||||||||||||    
T  14820394 ccacttttggtccctcctttcatcacatcagcagaatctgcata 14820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 30789886 - 30789773
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  30789886 agggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 30789787  T
Q  176 tccacttttggtcc 189  Q
    ||||||||||||||    
T  30789786 tccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 21148315 - 21148171
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||         | ||||||||||||| ||||||||||||||||    
T  21148315 agggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattct 21148216  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||| ||||||  || || ||||| |||||||||||||||    
T  21148215 tccacttttagtccctcctttcatcatgtcagcagaatctgcata 21148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 7689523 - 7689637
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||        |||||||| ||||||| |||||||||| |||||    
T  7689523 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttaga-tttgtccttgtaatttcagattct 7689621  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  7689622 tccacttttggtccct 7689637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 2583320 - 2583463
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||| | ||||        ||||||||||||||||||||||||||  ||||||    
T  2583320 gggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattctt 2583419  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    | ||||||| |||||  || || || || |||||||||||||||    
T  2583420 ctacttttgatccctcctttcatcacgtcagcagaatctgcata 2583463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 268
Target Start/End: Original strand, 43481408 - 43481505
Alignment:
Q  171 attcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    |||||||||||||||||| || ||||||||| | ||| ||||| |||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||    
T  43481408 attcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattaca 43481505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 17623261 - 17623122
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    ||||||||||||||| |||||||||||||||| ||||  ||||||||| ||||||        |||||||||||||||| |||||||||| |||||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgta-aaaaaaagatttagattttgtccttgtaatttcaaattcttcca 17623163  T
Q  180 cttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||| ||  || || || || |||||||||||||||    
T  17623162 cttttggtcactcctttcatcacgtcagcagaatctgcata 17623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 26136684 - 26136793
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||         ||||||||||||||| |||||||||| |||||    
T  26136684 agggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattct 26136783  T
Q  176 tccacttttg 185  Q
    |||| |||||    
T  26136784 tccaattttg 26136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 43481694 - 43481581
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattc 174  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||| |        |||||| |||||||||||||||||||| ||||    
T  43481694 agggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattc 43481595  T
Q  175 ttccacttttggtc 188  Q
    ||||||| ||||||    
T  43481594 ttccactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 42113360 - 42113219
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||         | ||||||| ||||||| |||||||| |||||    
T  42113360 agggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgta---aaaaaaaattagattatgtccctttaatttcaaattct 42113264  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||| |||||  || || ||||| |||| | ||||||||    
T  42113263 tccacttttgatccctcctttcatcatgtcagcaaattctgcata 42113219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 14767882 - 14767742
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||         | |||||||||||||||||||||||||||||||    
T  14767882 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgta---aaaaaaaattagattttgtccctgtaatttcatattctt 14767786  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||| |||  ||||||  || || || || | |||||||||||||    
T  14767785 ccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 14767742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 18044205 - 18044148
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgta 18044148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 21144865 - 21144740
Alignment:
Q  95 gtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcccttat 194  Q
    ||||||||||||||| |||||| || ||||||||||| ||         ||||||||||||||| |||||||||| |||| |||| |||| |||||||||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctccatttttcgtcccttat 21144766  T
Q  195 tccaccatgtaagcagaatctgcata 220  Q
    |  |||| || |||||||||||||||    
T  21144765 ttaaccacgtcagcagaatctgcata 21144740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 35367409 - 35367467
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||    
T  35367409 agggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgta 35367467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 42605822 - 42605867
Alignment:
Q  146 ttagattttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccct 42605867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 20877124 - 20877069
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccct 131  Q
    ||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  20877124 agggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 20875697 - 20875755
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||    
T  20875697 agggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtccttgta 20875755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 26136945 - 26136985
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggac 26136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 39888486 - 39888538
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  39888486 aatacctcttttggtccctataatataagcgaaattcggttttagtccctgta 39888538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 22494454 - 22494497
Alignment:
Q  146 ttagattttgtccctgtaatttcatattcttccacttttggtcc 189  Q
    ||||||||||| |||||||||||||||||||||| |||||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtcc 22494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 1949651 - 1949709
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||| ||||||||||||| | |||||| |||||||||| ||||||    
T  1949651 agggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgta 1949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 28977618 - 28977733
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| ||||| ||||||||||||| ||  | ||||  ||||||||||||||         ||||||||| ||||||| | |||||||||| |    
T  28977618 agggttaataccccttttggtccctgtaatatgagaaattttcaattttagtccctgtaaataagaaaatttagattctgtccctatcatttcatatttt 28977717  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  28977718 tccacttttggtccct 28977733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 38726686 - 38726793
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||  |||| ||||||||||||| ||| |||| |||||||||||||| ||          |||||||||||||| |||||||||| |||||    
T  38726686 agggttaataccctttttggtccctgtaatatgagcaaattccggttttagtccctataaaaaaaaaagtttagattttgtccttgtaatttcagattct 38726785  T
Q  176 tccacttt 183  Q
    ||||||||    
T  38726786 tccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 40487793 - 40487735
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||| ||||| |||| ||||||||||||||||| | |||||||||||||||    
T  40487793 agggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgta 40487735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 30789626 - 30789589
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30789626 aaatgagggatcaaaagtggaggaatctgaaattacag 30789589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 7689783 - 7689823
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  7689783 aatgagggatcaaaagtggaagaatctgaaattacagggac 7689823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 21148051 - 21148015
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||||||||    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggac 21148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 22494644 - 22494684
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  22494644 aatgagggaccaaaagtggaagaatttgaaattacagggac 22494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 43851782 - 43851742
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  43851782 aatgagggatcaaaagtggaagaatctgaaattacagggac 43851742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 30789773 - 30789807
Alignment:
Q  239 ggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| ||||||||||||||||||||    
T  30789773 ggaccaaaagtggaagaatctgaaattacagggac 30789807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 2583507 - 2583470
Alignment:
Q  237 agggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2583507 agggaccaaaagtaggaggaatctgaaattacagggac 2583470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 7689638 - 7689601
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  7689638 gagggaccaaaagtggaagaatctgaaattacaaggac 7689601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 10108485 - 10108448
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  10108485 gagggaccaaaagtggaagaatatgaaattacagggac 10108448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 14767698 - 14767735
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14767698 agggaccaaaagtgggaggaatctgaaattacagggac 14767735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 14820409 - 14820372
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  14820409 gagggaccaaaagtggaagaatatgaaattacagggac 14820372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 42113103 - 42113062
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  42113103 aaatgagggaccaaaagtgaaagaatcttaaattacagggac 42113062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 2583580 - 2583620
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  2583580 aatgaggaaccaaaagtggaagaatctgaaattatagggac 2583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 5555133 - 5555169
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggac 5555169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 10108552 - 10108588
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  10108552 gtccctgtaatttcaaattcctccacttttggtccct 10108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 10108634 - 10108670
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggac 10108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 10171403 - 10171443
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  10171403 aatgagggaccaaaagtgaaagaatctaaaattacagggac 10171443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 14767621 - 14767585
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||  |||||||||||||||||||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggac 14767585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 14820558 - 14820594
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggac 14820594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 17623005 - 17622969
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||||||||||||| |||||| |||||||||    
T  17623005 aatgagggaccaaaagtggaagaatctaaaattacag 17622969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 17623083 - 17623047
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  17623083 gtccctgtaatttcagattcctccacttttggtccct 17623047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 17720982 - 17721026
Alignment:
Q  90 ttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| ||| ||||| |||||||| |||||||||||||||||||||    
T  17720982 ttttggtcactgtattattagcggatttcggttttagtccctgta 17721026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 40486628 - 40486684
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctg 132  Q
    ||||| |||||  ||||| ||||||||||||||| |||||| || ||||||||||||    
T  40486628 agggttaatactacttttggtccctgtaatattaacgaattccgattttagtccctg 40486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 42605868 - 42605832
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  42605868 gagggaccaaaagtggaagaatatgaaattacaggga 42605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 43851860 - 43851824
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||||||||||||||||||| |||||||||| |||||    
T  43851860 gtccctgtaatttcatattcctccacttttgatccct 43851824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 78 - 275
Target Start/End: Original strand, 9516611 - 9516808
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||        |||||||||||||||| ||||||||||||||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9516711 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 9516808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 77 - 273
Target Start/End: Complemental strand, 26252615 - 26252418
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    ||||||||||||||  ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26252515 ccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 9619358 - 9619159
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||        |||||||||||||||| ||||||||||||||||    
T  9619358 agggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattct 9619259  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  9619258 tccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtggaggaatctgaaattacagggacca 9619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 9397077 - 9396882
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  9397077 agggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcagattct 9396979  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||||||||||| || | |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9396978 tccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacaggga 9396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 31090060 - 31090259
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  31090160 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaattacggggacca 31090259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 38573968 - 38574166
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| ||||||||||| ||||| || ||||| ||||||||        |||||||||||||||||||||||||||||||||    
T  38573968 agggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgta-aaaaaaagatttagattttgtccctgtaatttcatattct 38574066  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  38574067 tccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaattacagagacca 38574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 82 - 275
Target Start/End: Complemental strand, 4356253 - 4356061
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || |||||         |||| ||||||||| ||||||||||| |||||||||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgtaataaaaaaaattt-gattttgtctctgtaatttcaaattcttccact 4356155  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4356154 tttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggacca 4356061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 3018389 - 3018192
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||||| |||| |||||||||| |||||    
T  3018389 agggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgta-aaaaaaagatttagattt-gtccgtgtaatttcagattct 3018292  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
     ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3018291 accacttttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattatagggacca 3018192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 31944329 - 31944130
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||         | ||||||||||||| ||||||||||||||||    
T  31944329 agggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattct 31944230  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||| |||||| ||||||||| || | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31944229 tccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacatggacca 31944130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 46046429 - 46046622
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||         |  |||||||||||||||||||||||||||||    
T  46046429 agggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa------aaatagattttgtccctgtaatttcatattct 46046522  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| ||||| ||||||||| || || |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46046523 tccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggacca 46046622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 82 - 275
Target Start/End: Original strand, 37012712 - 37012905
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    ||||||||||||||||| |||||||||||||||||    ||| ||||| ||||        ||||||||||||||||||||||||||| |||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  37012812 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggacca 37012905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 78 - 275
Target Start/End: Original strand, 34063983 - 34064180
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    |||||||||||||||||||||||||||||||| ||||||   |||||||||||||||        ||||||||||||||| ||||||||||| |||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||| |||||||||  | ||| |||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  34064083 cacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaagtggaggaatctgaaattacagggacca 34064180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 82 - 275
Target Start/End: Original strand, 48579871 - 48580064
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||  ||||        ||||||||||||||| ||||||||||| |||||| || |    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaat 48579970  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||| || |||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| || |||||    
T  48579971 tttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaagtggaggaatttgaaattagagagacca 48580064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 79 - 275
Target Start/End: Complemental strand, 48260126 - 48259931
Alignment:
Q  79 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcc 178  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||||| || |||||        ||||||||||||||||||||||||||| ||||||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgta-aaaaaaagatttagattttgtccctgtaatttcaaattcttcc 48260028  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||| || || |||||| || || |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  48260027 acttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaataacagggacca 48259931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 78 - 268
Target Start/End: Complemental strand, 15641093 - 15640902
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||| | ||||||         |||||||||| |||||||||||||||| ||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    ||||||||||| ||| ||| ||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15640993 ccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaagtggaggaatctgaaattaca 15640902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 77 - 270
Target Start/End: Complemental strand, 3273996 - 3273806
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||        |||||||||||| |||||||||||||| ||||||    
T  3273996 gggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctata-aaaaaaagatttagattttatccctgtaatttcagattctt 3273899  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 270  Q
    ||||||||| ||||| ||| ||||| || || |||||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||    
T  3273898 ccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaacgtggagtaatctgaaattacagg 3273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 13131943 - 13132139
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattcttcc 178  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||         |||||||||| ||| | |||||||||| ||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||| ||||| ||| ||||| || ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||||||    
T  13132043 acttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaaattacatggacca 13132139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 7819322 - 7819194
Alignment:
Q  147 tagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaa 246  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  247 agtggaggaatctgaaattacagggacca 275  Q
    ||||||||||| |||||||||| ||||||    
T  7819222 agtggaggaatatgaaattacatggacca 7819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 80 - 260
Target Start/End: Complemental strand, 35376502 - 35376322
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    |||||| ||||||||||||||||||||||||| |||| | |||||||||||||||        |||||| |||||||||||||||||||| | |||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgta-aaaaaaagatttaaattttgtccctgtaatttcagaatcttcca 35376404  T
Q  180 cttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt-ggaggaatctg 260  Q
    |||||||||||| ||||||||| || |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  35376403 cttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaagtgggaggaatctg 35376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 18667669 - 18667469
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngattta-gattttgtccctgtaatttcatattc 174  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||| ||| ||||         |   | ||||||| ||||||||||||| ||||    
T  18667669 agggttaatacctcttttcgtccctgtaatattagcgaattccagttttaatccttgtaaaaaaaaaaaaaaaagattttgaccctgtaatttcagattc 18667570  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||| |||| |||||||||||||||| || || |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  18667569 ttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttaaaattacagggacc 18667470  T
Q  275 a 275  Q
    |    
T  18667469 a 18667469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 18713341 - 18713140
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc---cctgtacnnnnnnngatttagattttgtccctgtaatttcatat 172  Q
    ||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||   ||||||        ||||||||||||||| ||||||||||| ||    
T  18713341 agggttaatacctcttttcgtacctgtattattagcgagtttcggttttagtcgtccctgta-aaaaaaagatttagattttgtctctgtaatttcagat 18713243  T
Q  173 tcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||||||| ||||||||||||||||||||| || |||||||||| |||||||   ||||||| ||||||||||||||| ||||||| |||||||||| |||    
T  18713242 tcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggaccaaaagttgaggaatttgaaattacatgga 18713143  T
Q  273 cca 275  Q
    |||    
T  18713142 cca 18713140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 3018014 - 3018155
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattcttcc 178  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||         ||||||||||||||||||||||||||||||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||  || || || || |||||||||||||||    
T  3018114 acttttggtccctcctttcatcacgtcagcagaatctgcata 3018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 38574343 - 38574232
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||        |||||||||||||||||||||||||||||||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  180 cttttggtccct 191  Q
    ||||||||||||    
T  38574243 cttttggtccct 38574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 9516988 - 9516874
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||| ||||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9516889  T
Q  177 ccacttttggtccct 191  Q
    | |||||||||||||    
T  9516888 ctacttttggtccct 9516874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 9618982 - 9619123
Alignment:
Q  79 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcc 178  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| ||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcc 9619081  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||  || || || || | |||||||||||||    
T  9619082 acttttggtccctcctttcatcaagtcaacagaatctgcata 9619123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 13132318 - 13132176
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||        |||||||||| ||||||||||||||||||||||    
T  13132318 agggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc-tgta-aaaaaaagatttagattctgtccctgtaatttcatattct 13132221  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||| || || ||  | |||||||||||||||    
T  13132220 tccacttttggtcccttctttcatcaaatcagcagaatctgcata 13132176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 46046802 - 46046688
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  46046802 agggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 46046704  T
Q  176 tccacttttggtccct 191  Q
    |||||||||| |||||    
T  46046703 tccacttttgatccct 46046688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 9396702 - 9396842
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||         |||||||||||||||||| |||||||| ||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  180 cttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||  || || || || |||||||||||||||    
T  9396802 cttttggtccctcctttcatcacgtcagcagaatctgcata 9396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 31090440 - 31090325
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||         | |||||||||||||||||||||||| |||||    
T  31090440 agggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattct 31090341  T
Q  176 tccacttttggtccct 191  Q
    || |||||||||||||    
T  31090340 tctacttttggtccct 31090325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 15640724 - 15640829
Alignment:
Q  85 acctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccactttt 184  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||        |||||||||||||||||||||||||||||||||| |||||||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgta-aaaaaaagatttagattttgtccctgtaatttcatattctttcactttt 15640822  T
Q  185 ggtccct 191  Q
    |||||||    
T  15640823 ggtccct 15640829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 31943949 - 31944061
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||         ||||||||||||||||||||||||||||||||    
T  31943949 agggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattc 31944047  T
Q  175 ttccacttttggtc 188  Q
    ||||||||||||||    
T  31944048 ttccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 37013085 - 37012974
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||         | ||||||||||||||||||||||||||||||    
T  37013085 agggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgta-taaaaaaaaattagattttgtccctgtaatttcatattct 37012987  T
Q  176 tccacttttggtc 188  Q
    |||||||||||||    
T  37012986 tccacttttggtc 37012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 12904746 - 12904870
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||         ||||||||||||||| | |||||||| |||||    
T  12904746 agggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgta-aaaaaaaaatttagattttgtccttataatttcagattct 12904844  T
Q  176 tccacttttggtcccttattccacca 201  Q
    ||||||||||||| || |||||||||    
T  12904845 tccacttttggtctctcattccacca 12904870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 48580239 - 48580130
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||   ||        ||||||||||||||||||||||||||||||| |||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccact 48580140  T
Q  182 tttggtccct 191  Q
    ||||||||||    
T  48580139 tttggtccct 48580130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 3273620 - 3273736
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatt-tagattttgtccctgtaatttcatattc 174  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||||||||| |||          || ||||||||||||||||||||||||||||    
T  3273620 agggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattc 3273719  T
Q  175 ttccacttttggtccct 191  Q
    |||||||||||||||||    
T  3273720 ttccacttttggtccct 3273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 48259822 - 48259938
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||        |||||||||||||||| |||||||||| ||||     
T  48259822 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattcc 48259921  T
Q  176 tcc-acttttggtccct 191  Q
    ||| |||||||||||||    
T  48259922 tcctacttttggtccct 48259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 35376164 - 35376273
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||        ||||||||||||||| ||||||||| | |||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgta-aaaaaaagatttagattttgtctctgtaattttagattcttc 35376262  T
Q  178 cacttttggtc 188  Q
    |||||||||||    
T  35376263 cacttttggtc 35376273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 41947232 - 41947120
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||         | ||||||||||||| |||||||||||||| ||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcctttta--aaaaaaaaattagattttgtccttgtaatttcatattttt 41947135  T
Q  177 ccacttttggtccct 191  Q
    |||||||||||||||    
T  41947134 ccacttttggtccct 41947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 31218360 - 31218302
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31218360 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 31218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 34064345 - 34064217
Alignment:
Q  92 ttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||| |||||||||||  ||||||||||||| |  |||||        ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  34064345 ttcgtccatgtaatattagtaaatttcggttttaatttctgtaaaataaaagatttagattttgtctctgtaatttcagattcttccacttttggtccct 34064246  T
Q  192 tattccaccatgtaagcagaatctgcata 220  Q
    | || || || || |||||||||||||||    
T  34064245 tctttcatcacgtcagcagaatctgcata 34064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 7819018 - 7819124
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcca 179  Q
    |||||||||||||||| || | ||||||||||||||| |||||||||||  ||||        ||||||||||||||||||||||||||| |||||||||    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagtca-tgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 7819116  T
Q  180 cttttggt 187  Q
    ||||||||    
T  7819117 cttttggt 7819124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 4355887 - 4356024
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    |||||||||||| || | | ||||||||||||||| |||||||||| ||||||        | |||||||||||||  ||||||||||||||||| ||||    
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgta-aaaacaagctttagattttgtctatgtaatttcatattctttcact 4355985  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||| ||| || || || |||||||||||||||    
T  4355986 tttggtccctcatttcatcacgttagcagaatctgcata 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 41946964 - 41947020
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctg 132  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41946964 agggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 36887679 - 36887737
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  36887679 agggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgta 36887737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 26252337 - 26252411
Alignment:
Q  146 ttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  || || || || | |||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcata 26252411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 18713026 - 18713103
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||  || || || || |||| ||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcata 18713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 36889057 - 36888917
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| ||||| |||||| |||||||||||||||| ||||||||||| ||||         ||||||||| |||||||||||||||| ||||     
T  36889057 agggttaataccacttttggtccctataatattagcgaattttggttttagtcc-tgtaaaaaaaaa-atttagattatgtccctgtaatttcagattcc 36888960  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    ||||||||| ||||||  ||  ||| ||| |||||||||||||    
T  36888959 tccacttttagtccctcgtttaaccttgtcagcagaatctgca 36888917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 7819399 - 7819347
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 128  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  7819399 agggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 51029141 - 51029094
Alignment:
Q  87 ctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  51029141 ctcttttggtccctgtaatatgagcgaatttcggttttagtccctgta 51029094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 20069677 - 20069538
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| | ||||||||||||||||||| |||||||| | ||||| |||||||||          |||||||| ||||||| | |||| | |||||    
T  20069677 agggtaaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgtaaaaaaaag--tttagattatgtccctatcatttgagattct 20069580  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgc 217  Q
    ||||||||||||| || |||  | ||||| ||||||||||||    
T  20069579 tccacttttggtctctcattgaaacatgtcagcagaatctgc 20069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 12904963 - 12904874
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaat 165  Q
    ||||||||||| |||||||||   |||||||||||||||||| | ||||||||||||||        |||||| ||||||||||||||||    
T  12904963 agggtaaatacatcttttcgtttatgtaatattagcgaattttgattttagtccctgtaaaaaaaaagatttaaattttgtccctgtaat 12904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 31082184 - 31082324
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||| |||||||||||| |||||| |||||||| | | ||| |||||||||        | |||||||| ||||||| | |||| | |||||    
T  31082184 agggtaaataccccttttcgtccctataatatgagcgaattccaggtttggtccctgtaaaaaaaaag-tttagattctgtccctatcatttgagattct 31082282  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgc 217  Q
    ||||||||||| |||| |||  | ||||| ||||||||||||    
T  31082283 tccacttttggcccctcattgaaacatgtcagcagaatctgc 31082324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 31083463 - 31083362
Alignment:
Q  89 cttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtc 188  Q
    ||||||||||||||||||| |||||||| ||||||| || || |||         ||||||||||||||||| | |||| | ||||||||||||||||||    
T  31083463 cttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattcttccacttttggtc 31083364  T
Q  189 cc 190  Q
    ||    
T  31083363 cc 31083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 53896445 - 53896503
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| ||||||||||||  || ||||||||| |||||||| |||||||||||||||||    
T  53896445 agggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgta 53896503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 9619095 - 9619058
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9619095 gagggaccaaaagtggaagaatctgaaattacagggac 9619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 15640974 - 15641015
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  15640974 aaatgaggaaccaaaagtggaagaatctgaaattacagggac 15641015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 26252383 - 26252346
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26252383 gagggaccaaaagtggaagaatctgaaattacagggac 26252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 36888943 - 36888980
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  36888943 gagggactaaaagtggaggaatctgaaattacagggac 36888980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 43312324 - 43312287
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  43312324 gagggactaaaagtggaggaatctgaaattacagggac 43312287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 43313589 - 43313532
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| |||||| ||||| ||| ||||||||||||||||||  ||||||||||||||||    
T  43313589 gggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgta 43313532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 3273879 - 3273919
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  3273879 aaatgagggatcaaaagtggaagaatctgaaattacaggga 3273919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 7819274 - 7819314
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  7819274 aatgagggaccaaaagtggaagaatctgacattacagggac 7819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 9516806 - 9516688
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    ||||||||||||||| |||| |||||||||||||||| |||  ||    |||||| ||||| ||||| ||| ||    ||  ||||||||||||||||||    
T  9516806 gtccctgtaatttcagattcctccacttttggtccctcattttacgtatcatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaagtg 9516711  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || |||| |||||||||| ||||    
T  9516710 gaagaatatgaaattacaaggac 9516688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 31090179 - 31090139
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  31090179 aatgagggaccaaaagtggaagaatatgaaattacagggac 31090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 34064100 - 34064064
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||||||||||||| ||||||||||||||||    
T  34064100 aatgagggaccaaaagtggaagaatctgaaattacag 34064064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 35376388 - 35376428
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  35376388 aatgagggaccaaaagtggaagattctgaaattacagggac 35376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 37012821 - 37012785
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggac 37012785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 38574160 - 38574046
Alignment:
Q  159 ctgtaatttcatattcttccacttttggtcccttattcca----ccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagg 254  Q
    |||||||||||||||| |||||||||||||||| |||  |    ||||||| ||||| |||||  || ||    ||  |||||||||||||||||||| |    
T  38574160 ctgtaatttcatattcctccacttttggtccctcattttacatgccatgtatgcagattctgctgacgtg----gtggaatgagggaccaaaagtggaag 38574065  T
Q  255 aatctgaaattacagggac 273  Q
    ||| |||||||||||||||    
T  38574064 aatatgaaattacagggac 38574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 46935218 - 46935170
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggtttt 124  Q
    ||||| |||||||||||| |||||| |||||||||||||||||| ||||    
T  46935218 agggttaatacctcttttggtccctataatattagcgaatttcgatttt 46935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 50462775 - 50462735
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatt 116  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  50462775 agggttaatacctcttttggtccctgtaatattagcgaatt 50462735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 9396882 - 9396917
Alignment:
Q  156 tccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9396882 tccctgtaatttcatattcctccacttttggtccct 9396917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 3018127 - 3018090
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  3018127 gagggaccaaaagtggaagaatatgaaattacagggac 3018090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 3273737 - 3273700
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  3273737 gagggaccaaaagtggaagaatatgaaattacagggac 3273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 7819129 - 7819092
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  7819129 gaggaaccaaaagtggaagaatctgaaattacagggac 7819092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 9516873 - 9516910
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| || ||||||||||||||||||||    
T  9516873 gagggaccaaaagtagaagaatctgaaattacagggac 9516910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 12520707 - 12520780
Alignment:
Q  145 tttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    |||||||||||||||| |||||||| |||| ||||||||| || |||  ||  ||| ||| |||||||||||||    
T  12520707 tttagattttgtccctataatttcagattcctccacttttagttcctcgtttaaccctgtcagcagaatctgca 12520780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 18667476 - 18667439
Alignment:
Q  237 agggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18667476 agggaccaaaagttggaggaatctgaaattacagggac 18667439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 31090324 - 31090361
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| || ||||||||||||||||||||    
T  31090324 gagggaccaaaagtagaagaatctgaaattacagggac 31090361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 38574231 - 38574268
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  38574231 gagggaccaaaagtggaagaatatgaaattacagggac 38574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 46046687 - 46046724
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  46046687 gagggatcaaaagtggaagaatctgaaattacagggac 46046724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 7819196 - 7819232
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  7819196 gtccatgtaatttcatattcctccacttttggtccct 7819232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 9396959 - 9396999
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  9396959 aatgatggtccaaaagtggaagaatctgaaattacagggac 9396999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 12520643 - 12520691
Alignment:
Q  83 atacctcttttcgtccctgtaatattagcgaatttcggttttagtccct 131  Q
    ||||| ||||| |||||| ||||||||||||||| | ||||||||||||    
T  12520643 ataccacttttagtccctataatattagcgaattccagttttagtccct 12520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 13132060 - 13132024
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    |||||||||| |||||||||| |||||||||||||||    
T  13132060 aaatgagggatcaaaagtggaagaatctgaaattaca 13132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 13132205 - 13132241
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  13132205 agggaccaaaagtggaagaatatgaaattacagggac 13132241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 26252497 - 26252537
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  26252497 aatgggggaccaaaagtggaagaatatgaaattacagggac 26252537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 34064246 - 34064278
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||||||||| ||||||||||||||||    
T  34064246 agggaccaaaagtggaagaatctgaaattacag 34064278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 46046542 - 46046502
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  46046542 aatgagggatcaaaagtggaagaatatgaaattacagggac 46046502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 39711451 - 39711252
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||        ||||||||||||||||| |||||||||||||||    
T  39711451 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattct 39711352  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39711351 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaattacagggacca 39711252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 17606685 - 17606488
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||| |||||||||| |||||    
T  17606685 agggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta--aaaaaagatttagattttgtccttgtaatttcagattct 17606588  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||| || |||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17606587 tccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggacca 17606488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 272
Target Start/End: Original strand, 39826049 - 39826245
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  39826049 agggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 39826148  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||| ||||| ||||||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  39826149 tccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaattacaggga 39826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 4906961 - 4907160
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||        |||||||||||||||||||||||||||||||||    
T  4906961 agggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattct 4907060  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| || ||| ||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  4907061 tccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggatgaatctgaaattacagggacca 4907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 33628689 - 33628888
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||        ||||||||||||||||| ||||||||| |||||    
T  33628689 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattct 33628788  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    | |||||||||||||| |||||||||  |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33628789 ttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggacca 33628888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 77 - 268
Target Start/End: Complemental strand, 30299609 - 30299418
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||        ||||||||||||||||||||||||| | ||||||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattctt 30299510  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  30299509 ccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattaca 30299418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 272
Target Start/End: Original strand, 34749137 - 34749332
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| ||||||| |||||||||||||||||||||  | ||||||||||| ||        ||||||||||||||||| |||||||||||||||    
T  34749137 agggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctata-aaaaaaagatttagattttgtccccgtaatttcatattct 34749235  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  34749236 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 273
Target Start/End: Complemental strand, 20996046 - 20995851
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||| |||||||||||||||||||||||  |||||||||| ||||        ||||||||||||||| |||||||||||||||||    
T  20996046 agggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgta-aaaaaaagatttagattttgtctctgtaatttcatattct 20995948  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  20995947 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgt-aaatgagggaccaaaagtggagaaatttgaaattacagggac 20995851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 48072340 - 48072144
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||  ||||||||||| ||||| |||||||||||| ||||         ||||||||| ||||||||||||||||||||||    
T  48072340 agggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattct 48072241  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||  ||| ||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48072240 tccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 48072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 77 - 270
Target Start/End: Complemental strand, 13230110 - 13229916
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccct-gtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || |||         | |||||||||| | || ||||||||| ||||    
T  13230110 gggtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtctcttgtaaaaaaaaaaaattagattttgcctctttaatttcatcttct 13230011  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 270  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13230010 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctgaaattacagg 13229916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 52058011 - 52058209
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||||||  |||||        |||||||| | |||||||||||||||| ||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattctt 52058110  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||| |||||  | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  52058111 ccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaatatgaaattacaaggacca 52058209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 96 - 275
Target Start/End: Original strand, 42510034 - 42510212
Alignment:
Q  96 tccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcccttatt 195  Q
    ||||||||||||||||||||| |||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaata-atttagattttgtccctgtaatttcatattcttccacttttagtccctcatt 42510132  T
Q  196 ccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
     |||||  | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42510133 tcaccacatcagcagaatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaattacagggacca 42510212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 24468002 - 24467808
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||   | ||||||||||| ||||| |||||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  24468002 gggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467906  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||| ||||| || || |||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  24467905 ccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaatgtggagtaatctgaaattacagggacca 24467808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 43539726 - 43539530
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||| ||||||||||||||||||||||||| |||| |||||||||| ||||||         |  | |||||||||| |||||||||| |||||    
T  43539726 agggttaatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgtaaaaaaaaaaaaattgattttgtccatgtaatttcaaattct 43539627  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  43539626 tccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaatttgaaattacaggga 43539530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 8293187 - 8292984
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||||| |||||||| ||||||   |||||||||||||||         ||||||||||||||||||||||||||||||||    
T  8293187 agggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 8293088  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggacca---aaagtggaggaatctgaaattacaggg 271  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||||||| || | |||||||||||| |   ||||||||||||||| |||||||| ||    
T  8293087 ttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggactaattaaagtggaggaatctaaaattacatgg 8292988  T
Q  272 acca 275  Q
    ||||    
T  8292987 acca 8292984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 77 - 268
Target Start/End: Original strand, 39970645 - 39970837
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| |||||||||| ||||||||  ||||| || |||||         |||||||||||||||  |||||||||| |||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattct 39970744  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    |||||||||||||||| ||||||||| || |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  39970745 tccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaagtggatgaatctgaaattaca 39970837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 29696936 - 29696743
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||   ||||||||||||||||| ||||||||||| |||||         ||| ||||||||||| |||||||||| |||||    
T  29696936 agggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatt-agattttgtccatgtaatttcagattct 29696838  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| |||||||||||||||||      |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29696837 tccacttttggtccctcattccaccacgtaagcagaatctgcat-----gcacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggacca 29696743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 18462663 - 18462465
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||| |||||||||||||| |||||||||||||||| |||| |||||||||| | ||||        ||||||||||||||||| ||||||||| |||||    
T  18462663 agggcaaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattct 18462564  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||| || ||| ||||| || | ||||||||||||||||| |||| ||||||| |||||||| |||||| ||| |||||||| ||||||||    
T  18462563 tccacttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatga-ggaccaaacgtggagtaatatgaaattatagggacca 18462465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 189
Target Start/End: Complemental strand, 39826424 - 39826312
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T
Q  177 ccacttttggtcc 189  Q
    |||||||||||||    
T  39826324 ccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 7473862 - 7473990
Alignment:
Q  147 tagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaa 246  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||| || |  |||||||||||||||| ||||| |||||| ||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaa 7473961  T
Q  247 agtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||| ||||||    
T  7473962 agtggaggaatctgaaattacaaggacca 7473990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 18462285 - 18462399
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  18462285 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcagattct 18462383  T
Q  176 tccacttttggtccct 191  Q
    |||| |||||||||||    
T  18462384 tccatttttggtccct 18462399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 52058387 - 52058272
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||        |||||||||| |||||||||||||||| |||||    
T  52058387 agggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattct 52058288  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  52058287 tccacttttggtccct 52058272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 18342395 - 18342261
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||         ||||| ||||| | | |||||||||||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgta--aaaaaaaatttaaattttattcttgtaatttcatattctt 18342298  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaat 213  Q
    |||||||| |||||| ||||||||| |||||||||||    
T  18342297 ccacttttagtccctcattccaccacgtaagcagaat 18342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 29696564 - 29696671
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||| |||||||||||||||    
T  29696564 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgta-aaaaaaagatttagattttgtccccgtaatttcatattct 29696662  T
Q  176 tccactttt 184  Q
    |||||||||    
T  29696663 tccactttt 29696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 30299231 - 30299342
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||        |||||||||||||||||||||||||||||||||    
T  30299231 agggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 30299329  T
Q  176 tccacttttggtc 188  Q
    |||||||||||||    
T  30299330 tccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 8292804 - 8292947
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||        ||||||||||||||||||| ||||||||||||||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattctt 8292903  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||| |||  || || || || |||||||||||||||    
T  8292904 ccacttttggttcctcttttcatcacgtcagcagaatctgcata 8292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 39971024 - 39970880
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |        ||||||||||||||||||||||||| | || ||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcct 39970925  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||| || || || || ||||||||| |||||    
T  39970924 tccacttttggtcccttctttcatcacgtcagcagaatccgcata 39970880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 4907340 - 4907197
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| || ||||| ||||||||||||||||||||| | |||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  || || || || || ||||||||||||    
T  4907240 ccacttttggtccctcctttcatcacgtcagtagaatctgcata 4907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 80 - 216
Target Start/End: Original strand, 17606307 - 17606447
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn----gatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||            |||||||||||||| ||||||||||||||||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctg 216  Q
    |||||||||||||||| ||| || || || |||||||||||    
T  17606407 tccacttttggtccctcatttcatcacgtcagcagaatctg 17606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 24467628 - 24467742
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  24467628 agggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcagattct 24467726  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  24467727 tccacttttggtccct 24467742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 39711074 - 39711215
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||        |||||||||||||||| |||||||||||||||||    
T  39711074 gggtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgta-aaaaaaagatttagattttgtccttgtaatttcatattctt 39711171  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  ||  | || || |||||||||||||||    
T  39711172 ccacttttggtccctcctttaatcacgtcagcagaatctgcata 39711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 33629069 - 33628954
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||         | || ||||||||||||||||||||| |||||    
T  33629069 agggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattct 33628970  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  33628969 tccacttttggtccct 33628954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 76 - 203
Target Start/End: Complemental strand, 30252279 - 30252150
Alignment:
Q  76 agggtaaatacctcttttc--gtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatatt 173  Q
    ||||||||||||||||| |  |||||| |||||||||||||||  ||||||||||||||||        ||||||||||||||||| |||||||||||||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatatt 30252180  T
Q  174 cttccacttttggtcccttattccaccatg 203  Q
    |||||| ||||| ||||| |||||||||||    
T  30252179 cttccatttttgatccctcattccaccatg 30252150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 16294302 - 16294182
Alignment:
Q  100 tgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccac 199  Q
    |||||||||||| ||||||| ||||||||||||||         ||||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||    
T  16294302 tgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaac 16294203  T
Q  200 catgtaagcagaatctgcata 220  Q
    ||||| |||||||||| ||||    
T  16294202 catgtcagcagaatctacata 16294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 34749483 - 34749340
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||| ||| ||||||||||| |||||| || ||||||||| ||||        |||||||||||| |||||||||||||| ||||||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 34749384  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||| |||  ||  | || || |||||||||||||||    
T  34749383 ccacttttggtacctcctttaatcacgtcagcagaatctgcata 34749340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 48071961 - 48072075
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| |||| |||||||||| | |||||||||||||||||  ||||||||| ||||||        ||||||||||||||||||||||||||||||| ||    
T  48071961 gggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattatt 48072060  T
Q  177 ccacttttggtccct 191  Q
    ||||||||| |||||    
T  48072061 ccacttttgctccct 48072075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 43539349 - 43539490
Alignment:
Q  79 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcc 178  Q
    ||||||| |||||||| ||| ||||| |||||| |||| || ||||||||| ||||        ||||||||||||||||||||||||| ||||| ||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||  || || || || |||||||||||||||    
T  43539449 acttttggtccctcctttcatcacgtcagcagaatctgcata 43539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 20995697 - 20995755
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  20995697 agggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgta 20995755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 215044 - 215109
Alignment:
Q  209 agaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||| |||||||| |||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggacc 215109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 17502095 - 17501967
Alignment:
Q  89 cttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtc 188  Q
    ||||| |||| ||||||||||||||||| |||||||||||||| ||        | |||||||| |||||||||||||||| |||| ||||||||| |||    
T  17502095 cttttggtccttgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccctgtaatttcagattcctccacttttagtc 17501997  T
Q  189 ccttattccaccatgtaagcagaatctgca 218  Q
    |||  ||  ||| ||| |||||||||||||    
T  17501996 cctcgtttaaccctgtcagcagaatctgca 17501967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 26271264 - 26271206
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||| ||||| |||||||||||||| ||||||||| |||||||||    
T  26271264 agggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgta 26271206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 27039637 - 27039695
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||||| |||| ||||    
T  27039637 agggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtccttgta 27039695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 20995747 - 20995812
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||| |||||||| ||||||||||||||| || || || || |||||||||||||||    
T  20995747 gtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcata 20995812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 24467886 - 24467927
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacagggac 24467927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 52058130 - 52058089
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacagggac 52058089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 42510388 - 42510336
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||| ||||    
T  42510388 aataccacttttggtccctgtaatattagcgaattccggttttagtccttgta 42510336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 17500768 - 17500826
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| ||||||  |||| |||||||||||||||||||||| ||||||||||| |||||    
T  17500768 agggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgta 17500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 43400752 - 43400810
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| |||||||||||||||| || |||||| |||||||| ||||||| |||||||||    
T  43400752 agggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgta 43400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 4907225 - 4907262
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  4907225 gagggaccaaaagtggaagaatctgaaattacagggac 4907262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 17501993 - 17502030
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17501993 gagggactaaaagtggaggaatctgaaattacagggac 17502030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 24467743 - 24467706
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  24467743 gagggaccaaaagtggaagaatctgaaattacagggac 24467706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 33628953 - 33628990
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33628953 gagggaccaaaagtggaagaatctgaaattacagggac 33628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 37236723 - 37236772
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccct 131  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 43401128 - 43401071
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| ||||||||||||||| |||||||||| | |||||||| ||||| |||||||||    
T  43401128 gggttaatacctcttttcgttcctgtaatatgatcgaatttcagttttggtccctgta 43401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 52058271 - 52058308
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  52058271 gagggaccaaaagtggaagaatctgaaattacagggac 52058308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 4907080 - 4907040
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  4907080 aatgagggaccaaaagtggaagaatatgaaattacagggac 4907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 8293067 - 8293107
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  8293067 aatgagggaccaaaagtggaagaatatgaaattacagggac 8293107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 26266420 - 26266472
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| ||||||| |||||||||||||||||||| ||||||||| ||| |||||    
T  26266420 aatatctcttttagtccctgtaatattagcgaaattcggtttttgtctctgta 26266472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 29696818 - 29696858
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  29696818 aatgagggaccaaaagtggaagaatctgaaattacatggac 29696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 30299491 - 30299531
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  30299491 aatgagggaccaaaagtggaagaatctaaaattacagggac 30299531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 39826168 - 39826128
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  39826168 aatgagggatcaaaagtggaagaatctgaaattacagggac 39826128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 42510210 - 42510092
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    ||||||||||||||| |||| |||||||||||||||| ||| |||    |||||| ||||| |||||  |  ||    || ||||||||||| |||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgtatgcagattctgctgatgtg----gtgaaatgagggactaaaagtg 42510115  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || |||| |||||||||||||||    
T  42510114 gaagaatatgaaattacagggac 42510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 16294048 - 16294099
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagt 127  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||| |||||||    
T  16294048 agggttaataccgattttggtccctgtaatattagcgaatttcgattttagt 16294099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 268
Target Start/End: Complemental strand, 39970764 - 39970729
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    |||||||||||||||||||| |||||||||||||||    
T  39970764 aatgagggaccaaaagtggaagaatctgaaattaca 39970729  T

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Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 17606427 - 17606389
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagg 270  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  17606427 aaatgagggaccaaaagtggaagaatatgaaattacagg 17606389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 39826312 - 39826346
Alignment:
Q  239 ggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| ||||||||||||||||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggac 39826346  T

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Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 4907153 - 4907190
Alignment:
Q  237 agggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  4907153 agggaccaaaagtaggaggaatctgaaattacagggac 4907190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 7473911 - 7473874
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  7473911 aaatgagggaccaaaagtggaagaatatgaaattacag 7473874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 13229803 - 13229840
Alignment:
Q  148 agattttgtccctgtaatttcatattcttccacttttg 185  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttg 13229840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 16294206 - 16294247
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||| ||||||||||||||||||||| |||||||||| ||||    
T  16294206 aaataagggaccaaaagtggaggaatatgaaattacaaggac 16294247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 18462400 - 18462363
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  18462400 gagggaccaaaaatggaagaatctgaaattacagggac 18462363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 18462543 - 18462584
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||| ||||||||||||| |||||||||||||| |||||    
T  18462543 aaatgagagaccaaaagtggaagaatctgaaattacggggac 18462584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 17606490 - 17606526
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  17606490 gtccctgtaatttcaaattcctccacttttggtccct 17606526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 17606572 - 17606608
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggac 17606608  T

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Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 33628808 - 33628768
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||| | |||||||||||||| |||||    
T  33628808 aatgagggaccaaaagtgaaagaatctgaaattacggggac 33628768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 34749255 - 34749215
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  34749255 aatgagggaccaaaagtggaagaatatgaaattacggggac 34749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 34749368 - 34749404
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||| |||||||||||| |||||||||||||||||||    
T  34749368 gaggtaccaaaagtggaagaatctgaaattacaggga 34749404  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 39711332 - 39711372
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  39711332 aatgagggaccaaaagtggaagaatatgaaattacggggac 39711372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 23806330 - 23806132
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23806231  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||||||||| || |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23806230 ccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggacca 23806132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 76 - 273
Target Start/End: Complemental strand, 26236473 - 26236277
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |        ||||||||||||||||||||||||||| |||||    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttgga-aaaaaaagatttagattttgtccctgtaatttcagattct 26236375  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26236374 tccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 17463470 - 17463271
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||| ||||||||    
T  17463470 agggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattct 17463371  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||||||| |||||||||||||||    
T  17463370 tccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaattacagggacca 17463271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 15106443 - 15106247
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||| ||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattctt 15106346  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||| ||||| ||||||||| || |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15106345 ccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggacca 15106247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 76 - 272
Target Start/End: Original strand, 26560555 - 26560749
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||        ||||||||||| ||||||||||||||| |||||    
T  26560555 agggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgta--aaaaaagatttagatttagtccctgtaatttcagattct 26560652  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  26560653 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacaggga 26560749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 22263192 - 22263389
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| ||||| ||||||| ||||||||||||||| |||||  |||||||||| || |         ||||||||||||||||||||||||||||||||||    
T  22263192 gggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatg-aaaaaaagatttagattttgtccctgtaatttcatattctt 22263290  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22263291 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggacca 22263389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 19251848 - 19251653
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||        |||||||||| ||||| ||||||||||||||||    
T  19251848 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta-aaaaaaagatttagattctgtccttgtaatttcatattct 19251750  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    |||||||| ||||||| ||| ||||| || ||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  19251749 tccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaattacaggga 19251653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 81 - 273
Target Start/End: Original strand, 30390463 - 30390655
Alignment:
Q  81 aaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccac 180  Q
    ||||| |||||||||||| ||||||||||||||||| || ||||| ||||||||         | |||||||||||||||||||||||||||||||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccac 30390562  T
Q  181 ttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||  |||||||||||||||||||||| || ||||||||||||||||||||||    
T  30390563 ttttggtccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 42670717 - 42670917
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngat--ttagattttgtccctgtaatttcatattc 174  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||         |   ||||||||||||| |||||||||||||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcatattc 42670816  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||||||||||||| || |||| ||| ||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42670817 ttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggacc 42670916  T
Q  275 a 275  Q
    |    
T  42670917 a 42670917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 17850587 - 17850784
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||        ||||||||||||||| ||||||||| | ||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctata-aaaaaaagatttagattttgtctctgtaatttaagattctt 17850685  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||| ||||| ||||||||| || |||||||||||||||||||  || |||||||||||| |||||||||||||||||||||||| ||| ||||    
T  17850686 ccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtggaggaatctgaaattaaaggaacca 17850784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 26136195 - 26135997
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||         |||||||||||||||  ||||||||||||||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc-tgtaaaaaaaaaagatttagattttgtcattgtaatttcatattct 26136097  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||| || ||  ||||| || ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  26136096 tccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaattacaaggacca 26135997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 20499124 - 20498925
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||| ||||| || ||| ||||||| | |||| ||||||||||| |||||        ||||||||||||||||||||||||||| |||||    
T  20499124 agggtaaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20499025  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    | |||||||||||| | ||| |||||  | ||||||||||||||||||  |||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  20499024 ttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggatcaaaagtggagtgatctgaaattacagggacca 20498925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 272
Target Start/End: Original strand, 23854688 - 23854861
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23854787  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 272  Q
    ||||||||||                      |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  23854788 ccacttttgg----------------------agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 23854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 19251470 - 19251584
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  19251470 agggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcatattct 19251568  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  19251569 tccacttttggtccct 19251584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 33290426 - 33290229
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| ||||| ||||||||||||||||||||||  ||||||| ||||||||         | |||||||||| || ||||||||||||||||    
T  33290426 agggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaa--aattagattttgaccttgtaatttcatattct 33290329  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||| ||||| || |  | |||||||||||||| | | | ||||||||||||||||||||||| ||||||||||||||||||||    
T  33290328 tccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatctgaaattacagggacca 33290229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 13254811 - 13254638
Alignment:
Q  80 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattcttcc 178  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||         |||||| ||||  ||| |||||||||| ||||||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaatttaatcc-tgtaatttcagattcttcc 13254713  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggag 253  Q
    ||||||||||||| ||| |||||  ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  13254712 acttttggtccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 13284484 - 13284606
Alignment:
Q  153 ttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgga 252  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||| |  | ||||||||||||||||||||||| ||||||||||||||||||| |    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaa 13284583  T
Q  253 ggaatctgaaattacagggacca 275  Q
    | ||| |||||||||||||||||    
T  13284584 gaaatatgaaattacagggacca 13284606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 17850965 - 17850850
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        | ||||||||||||||||||||||||| |||||    
T  17850965 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattct 17850866  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  17850865 tccacttttggtccct 17850850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 39878402 - 39878282
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagg 254  Q
    ||||||||||||||| ||| || |||||||||||||| ||| ||||| |  ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  39878402 gtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagt 39878303  T
Q  255 aatctgaaattacagggacca 275  Q
    |||||||||||| ||||||||    
T  39878302 aatctgaaattagagggacca 39878282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 42671097 - 42670954
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||        |||||||||| |||||||||||||||||||| ||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattttt 42670998  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||||  || || || || |||||||||||||||    
T  42670997 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 42670954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 22263572 - 22263426
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt--acnnnnnnngatttagattttgtccctgtaatttcatatt 173  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||  |        |||| ||||||||||||||||||||||||||    
T  22263572 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatatt 22263473  T
Q  174 cttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||||  || || || || |||| ||||||||||    
T  22263472 cttccacttttggtccctcctttcatcacgtcagcataatctgcata 22263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 15106067 - 15106181
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||| | ||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  177 ccacttttggtccct 191  Q
    |||||||||||||||    
T  15106167 ccacttttggtccct 15106181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 26135828 - 26135960
Alignment:
Q  88 tcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggt 187  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||        ||||||||||||||||||||||||||| ||||||| |||||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  188 cccttattccaccatgtaagcagaatctgcata 220  Q
    ||||  || || || || | |||||||||||||    
T  26135928 ccctcctttcatcaagtcaacagaatctgcata 26135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 26236126 - 26236270
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||        |||||| |||||||||||||||||||| |||||    
T  26236126 agggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattct 26236225  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    | ||||||||||||||  || || || || |||||||| ||||||    
T  26236226 ttcacttttggtccctcctttcatcacgtcagcagaatttgcata 26236270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 13254496 - 13254607
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||| |||||    
T  13254496 agggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattct 13254595  T
Q  176 tccacttttggt 187  Q
    | ||||||||||    
T  13254596 ttcacttttggt 13254607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 34548574 - 34548684
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||        |||||||||||||||| |||||||||||||| ||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgta-aaaaaaagatttagattttgtccatgtaatttcatattgtt 34548672  T
Q  177 ccacttttggtc 188  Q
    |||| |||||||    
T  34548673 ccacctttggtc 34548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 33290062 - 33290192
Alignment:
Q  90 ttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcc 189  Q
    |||| |||||||||||||||||||||| | |||||||||||||||         ||||||||| ||||| |||||||||||| || ||||||||||||||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcctccacttttggtcc 33290161  T
Q  190 cttattccaccatgtaagcagaatctgcata 220  Q
    ||||||  |||| || |||||||||||||||    
T  33290162 cttatttaaccacgtcagcagaatctgcata 33290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 20498746 - 20498859
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||         ||||||||| ||||||||| |||||| |||||    
T  20498746 agggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgta-aaaaaaatatttagattatgtccctgt-atttcagattct 20498843  T
Q  176 tccacttttggtccct 191  Q
    ||||||||||||||||    
T  20498844 tccacttttggtccct 20498859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 17463092 - 17463234
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||||||| |||||         ||| ||||||||||||||||||||||  ||||     
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaatt-agattttgtccctgtaatttcaggttctc 17463190  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||| ||| || || || | |||||||||||||    
T  17463191 ccacttttggtccctcatttcatcaagtcaacagaatctgcata 17463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 26560932 - 26560789
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||||| || |         | ||||||||||||| | |||||||||||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattctt 26560833  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||| ||  || || || || |||||||||||||||    
T  26560832 ccacttttggtctctcctttcatcacgtcagcagaatctgcata 26560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 30960050 - 30959909
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| ||||| |||||||||||||||||||||| |||||||||||| ||||        | |||||||| |||||||||||||||||||||     
T  30960050 agggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaaaaaaaaag-tttagattatgtccctgtaatttcatattcc 30959952  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    |||||||||  |||||  ||  ||| ||| |||||||||||||    
T  30959951 tccacttttaatccctcgtttaaccctgttagcagaatctgca 30959909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 39878102 - 39878213
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||         ||||||||| |||  ||||||||||| |||||    
T  39878102 agggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattct 39878200  T
Q  176 tccacttttggtc 188  Q
    |||||||||||||    
T  39878201 tccacttttggtc 39878213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 23046706 - 23046813
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||| ||| || ||         ||||||||| |||||||||||||||| |||||    
T  23046706 agggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattct 23046805  T
Q  176 tccacttt 183  Q
    ||||||||    
T  23046806 tccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 12419101 - 12418960
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| ||||| |||||||||||||||||||||| |||||||||||||| ||        | |||||||| ||||| || ||||||  ||||     
T  12419101 agggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccatgaaatttccgattcc 12419003  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    ||||||||| |||||| |||  ||||||| |||||||||||||    
T  12419002 tccacttttagtccctcatttaaccatgtcagcagaatctgca 12418960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 12431161 - 12431020
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||| ||||| |||||||||||||||||||||| |||||||||||||| ||        | |||||||| ||||| || ||||||  ||||     
T  12431161 agggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccatgaaatttccgattcc 12431063  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    ||||||||| |||||| |||  ||||||| |||||||||||||    
T  12431062 tccacttttagtccctcatttaaccatgtcagcagaatctgca 12431020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 30958684 - 30958741
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  30958684 gggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgta 30958741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 44099000 - 44098894
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||| ||||||||||||||||||||| ||||||||  |||||| || ||||||         ||||||||| |||||||||||||||| ||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattctt 44098901  T
Q  177 ccacttt 183  Q
    |||||||    
T  44098900 ccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 23854977 - 23854901
Alignment:
Q  144 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||  || || || || |||||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 23854901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggtttt 124  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 13284779 - 13284734
Alignment:
Q  89 cttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgta 13284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 26236277 - 26236395
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttattcca----ccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    |||||||||||||||||||| |||||||||||||||| |||  |    ||||||| ||||| ||||| ||| ||    ||  ||||||||||||||| ||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaaatg 26236372  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || ||||||||||||||||||||    
T  26236373 gaagaatctgaaattacagggac 26236395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 23047961 - 23047903
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||||  ||||||||    
T  23047961 agggtaaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgta 23047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 13284667 - 13284708
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  13284667 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 13284708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 13254695 - 13254733
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagg 270  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  13254695 aaatgagggaccaaaagtggaagaatctgaaattacagg 13254733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 13284716 - 13284643
Alignment:
Q  147 tagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||| |||||||||| |||| |||||||||||||||| |||  |||| || | |||||||| ||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacata 13284643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 17850849 - 17850886
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17850849 gagggaccaaaagtggaagaatctgaaattacagggac 17850886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 23806022 - 23806095
Alignment:
Q  147 tagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||  || || || || ||||||||| |||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcata 23806095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 39878450 - 39878394
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    ||||||||||||||||| |||| ||||||||||||||||| | ||||| |||||||||    
T  39878450 gggtaaatacctctttttgtcc-tgtaatattagcgaattccagttttcgtccctgta 39878394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 15106327 - 15106367
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  15106327 aatgagggatcaaaagtggaagaatctgaaattacagggac 15106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 23806212 - 23806252
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  23806212 aatgagggaccaaaagtggaagaatatgaaattacagggac 23806252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 26560668 - 26560632
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggac 26560632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 30390577 - 30390537
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  30390577 aatgagggaccaaaagtggaagaatatgaaattacagggac 30390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 21482235 - 21482144
Alignment:
Q  99 ctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||||||||||||||||| | |||||||||| ||||        | |||||||||||||||||| |||| | |||||||||||||| ||||||    
T  21482235 ctgtaatattagcgaattccagttttagtccttgtaaaaaaatag-tttagattttgtccctgtcattttagattcttccacttttagtccct 21482144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 36359111 - 36359182
Alignment:
Q  145 tttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctg 216  Q
    |||||||||||||| |||||| |||||| |||||||||||  ||||| |||  | ||||| |||||||||||    
T  36359111 tttagattttgtccttgtaatatcatatacttccactttttatccctcattaaaacatgtcagcagaatctg 36359182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 13284411 - 13284461
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttag 126  Q
    ||||| |||||| ||||| ||||||||||||| |||||||| |||||||||    
T  13284411 agggttaataccactttttgtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 13284527 - 13284486
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||| ||||||||| |||| |||||||||||||||    
T  13284527 aaatgagggactaaaagtggaagaatatgaaattacagggac 13284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 17463210 - 17463169
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  17463210 aaatgagggaccaaaagtgggagaacctgaaattacagggac 17463169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 17463278 - 17463241
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17463278 agggaccaaaagtgggaggaatctgaaattacagggac 17463241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 19251585 - 19251548
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  19251585 gagggaccaaaagtggaagaatatgaaattacagggac 19251548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 19251653 - 19251686
Alignment:
Q  156 tccctgtaatttcatattcttccacttttggtcc 189  Q
    ||||||||||||||||||| ||||||||||||||    
T  19251653 tccctgtaatttcatattcctccacttttggtcc 19251686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 20499004 - 20499045
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||| |||||||||||| | ||||||||||||||||||||    
T  20499004 aaatgaaggaccaaaagtgaaagaatctgaaattacagggac 20499045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 22263454 - 22263491
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  22263454 gagggaccaaaagtggaagaatatgaaattacagggac 22263491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 23806139 - 23806102
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  23806139 agggaccaaaagtgggaggaatctgaaattacagggac 23806102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 26135932 - 26135895
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| || ||||||||||||||||||||    
T  26135932 gagggaccaaaagtagaagaatctgaaattacagggac 26135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 26236242 - 26236205
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  26236242 gagggaccaaaagtgaaagaatctgaaattacagggac 26236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 39878361 - 39878402
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||| |  |||||||||||||||||||    
T  39878361 aaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 22263305 - 22263269
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggac 22263269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 22263387 - 22263351
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  22263387 gtccctgtaatttcaaattcctccacttttggtccct 22263351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 139; Significance: 9e-73; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 4941 - 4743
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||        |||||||||||||||| ||||||||||||||||    
T  4941 agggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgta-aaaataagatttagattttgtccttgtaatttcatattct 4843  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4842 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 4743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 4561 - 4677
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| |        |||||| |||||||||||||||||| | ||||    
T  4561 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattc 4660  T
Q  175 ttccacttttggtccct 191  Q
    ||| |||||||||||||    
T  4661 ttctacttttggtccct 4677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 4745 - 4863
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtcccttatt----ccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 250  Q
    ||||||||||||||| |||| |||||||||||||||| |||      |||||||| ||||| ||||| ||| ||    ||  ||||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtg----gtggaatgagggaccaaaagtg 4840  T
Q  251 gaggaatctgaaattacagggac 273  Q
    || |||| |||||||||| ||||    
T  4841 gaagaatatgaaattacaaggac 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 9e-73; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 24837168 - 24837367
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||        |||||||||||||||| ||||||||||||||||    
T  24837168 agggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 24837267  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24837268 tccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggacca 24837367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 77 - 273
Target Start/End: Complemental strand, 18336833 - 18336638
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||| ||||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18336734 ccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 91 - 278
Target Start/End: Original strand, 41001370 - 41001554
Alignment:
Q  91 tttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtccc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||||||||||||     
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatattcttccacttttggtcct 41001466  T
Q  191 ttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccagaa 278  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  41001467 tcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaattacagggaccagaa 41001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 23979279 - 23979082
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||    
T  23979179 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaacgtggagtaatctgaaattaaagggacca 23979082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 31799640 - 31799838
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||        ||||||||||||||||||||||||||| ||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||    
T  31799740 ccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtggaggattttgaaattacagggacca 31799838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 82 - 275
Target Start/End: Original strand, 7125923 - 7126115
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||        |||||||||||||||||| |||||||| |||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgta-aaaaaaagatttagattttgtccctataatttcagattcttccact 7126021  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7126022 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggacca 7126115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 4918988 - 4919188
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnn-gatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||    
T  4918988 agggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 4919087  T
Q  175 ttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  4919088 ttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgacc 4919187  T
Q  275 a 275  Q
    |    
T  4919188 a 4919188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 14144280 - 14144081
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||||||| ||||||||||| |||||| || ||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  14144280 agggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 14144181  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  14144180 tccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacatggacca 14144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 17762661 - 17762462
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||        |||||||||||||||||  |||||||| |||||    
T  17762661 agggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattct 17762562  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||    
T  17762561 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtggaggaatctaaaattacagggacca 17762462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 78 - 275
Target Start/End: Original strand, 993751 - 993944
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||         | |||||||| |||| ||||||||||||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa---aattagatttagtccttgtaatttcatattcttc 993847  T
Q  178 cacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  993848 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatg-aattacagggacca 993944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 76 - 273
Target Start/End: Complemental strand, 14412044 - 14411847
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||| || || |||||||| ||||||||||||||||||||||||         ||||||||||||||| |||||||||| |||||    
T  14412044 agggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagattct 14411946  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    ||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14411945 tccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 24650704 - 24650898
Alignment:
Q  79 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttcc 178  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||        |||||||||||||| |||||||||||||||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgta--aaaaaagatttagattttgttcctgtaatttcatattcttcc 24650801  T
Q  179 acttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||  || ||||||||| || |||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24650802 acttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaattacagggacca 24650898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 76 - 269
Target Start/End: Original strand, 6817122 - 6817314
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||        |||||||||| ||||| |||||||||| |||||    
T  6817122 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta-aaaaaaagatttagattatgtccatgtaatttcagattct 6817220  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    |||||||||||||||| ||| ||||| || ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  6817221 tccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaattacag 6817314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 29445184 - 29444986
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||| |||||||||||||||||||||||||||||| | |||||||||| ||||        |||||||||||||||| |||||||||| |||||    
T  29445184 agggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattct 29445086  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||||||||||||| || || | ||| |||||||||||||||||||||||||||| |||| || |||||| |||||||||||||||||    
T  29445085 tccacttttggtcccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaaatgtaggaatttgaaattacagggacca 29444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 30512287 - 30512459
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||        ||||||||||| ||||||||||||||| ||| |    
T  30512287 agggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgta-aaaaaaggatttagatttggtccctgtaatttcagatttt 30512385  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgt-aaaatgagggaccaaaag 248  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  30512386 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 30552627 - 30552799
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||        ||||||||||| ||||||||||||||| ||| |    
T  30552627 agggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgta-aaaaaaggatttagatttggtccctgtaatttcagatttt 30552725  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgt-aaaatgagggaccaaaag 248  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  30552726 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 273
Target Start/End: Original strand, 27158990 - 27159185
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| | ||         |||||| |||||||||||||||||||| |||||    
T  27158990 agggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagtt-aaaaaaagatttaaattttgtccctgtaatttcagattct 27159088  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||||||||| || |||| ||||| |||||  | |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  27159089 tccacttttggtcccttattccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggatcaaaagtgggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 20709278 - 20709407
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggac 242  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||| || ||||||||||||||||||| |||||||||||||||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 20709377  T
Q  243 caaaagtggaggaatctgaaattacaggga 272  Q
     |||||||||||||| ||||||||||||||    
T  20709378 aaaaagtggaggaatatgaaattacaggga 20709407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 108 - 270
Target Start/End: Complemental strand, 24074649 - 24074487
Alignment:
Q  108 tagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaag 207  Q
    ||||||||| |||||||| ||||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| || ||    
T  24074649 tagcgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcag 24074550  T
Q  208 cagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 270  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  24074549 cagaatctgcatatatggcacgtaaaatgagggaccaaaagtggagaaatttgaaattacagg 24074487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 14143901 - 14144044
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  14143901 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta-aaaaaaagatttagattttgtccctgtaatttcatattct 14143999  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||| ||| ||| || || || || ||||||||||||    
T  14144000 tccacttttggtacctcatttcatcacgtcagtagaatctgcata 14144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 24074302 - 24074446
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||| |||||||||||||||||    
T  24074302 agggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattct 24074401  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  || || || || |||||||||||||||    
T  24074402 tccacttttggtccctcctttcatcacgtcagcagaatctgcata 24074446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 7126296 - 7126152
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||        |||||||||||||||||||||||||||||||||    
T  7126296 agggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 7126197  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  || || || || |||||||||||||||    
T  7126196 tccacttttggtccctcctttcatcacgtcagcagaatctgcata 7126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 14411696 - 14411840
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||| ||||||||  |||||||||| |||||    
T  14411696 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattct 14411795  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  || || || || |||||||| ||||||    
T  14411796 tccacttttggtccctcctttcatcacgtcagcagaatttgcata 14411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 17762282 - 17762425
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||        |||||| ||||||| |||||||||||| |||||    
T  17762282 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta-aaaaaaagatttatattttgttcctgtaatttcagattct 17762380  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  ||  | || ||||||||||||||||||    
T  17762381 tccacttttggtccctcctttaatcacgtaagcagaatctgcata 17762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 24837547 - 24837404
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||        ||||||||||||||||||||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    | ||||||| |||||  || || || || | |||||||||||||    
T  24837447 ctacttttgctccctcctttcatcaagtcaacagaatctgcata 24837404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 27159327 - 27159192
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||| ||||||||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||| || || || || |||||||||||||||    
T  27159230 tttggtcccttctttcatcacgtcagcagaatctgcata 27159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 41001729 - 41001617
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||        |||||||||||||||||| |||||||| |||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgta-aaaaaaagatttagattttgtccctataatttcagattcttc 41001631  T
Q  178 cacttttggtccct 191  Q
    ||||||||||||||    
T  41001630 cacttttggtccct 41001617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 994123 - 994010
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    |||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||| || ||||||    
T  994123 gggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattctt 994025  T
Q  177 ccacttttggtccct 191  Q
    |||||||||||||||    
T  994024 ccacttttggtccct 994010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 20709590 - 20709478
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||||||||        |||||||||||||||| ||||||||||||||||    
T  20709590 agggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgta-aaaaaaagatttagattttgtccatgtaatttcatattct 20709492  T
Q  176 tccacttttggtcc 189  Q
    ||||||||| ||||    
T  20709491 tccactttttgtcc 20709478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 275
Target Start/End: Original strand, 22571090 - 22571275
Alignment:
Q  90 ttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccacttttggtcc 189  Q
    |||| |||| ||||||||||||||||| || ||||||||||||||         ||||||||| | || |||||||||||||||||||||||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  190 cttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    || ||| ||||| || |  ||||| ||  | | ||| |||| ||||||||||||||||| ||| |||| |||||||| ||||||||    
T  22571190 ctcatttcaccacgtcaaaagaatatgtgtgcgtgatacgtgaaatgagggaccaaaagcggatgaatatgaaattagagggacca 22571275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 29444810 - 29444949
Alignment:
Q  81 aaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccac 180  Q
    ||||| ||||||||||||||||||||||| ||||||  | ||||||||||||||        |||||||||| ||||| |||||||||||||||||| ||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctac 29444909  T
Q  181 ttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||||  || || || || |||||||||||||||    
T  29444910 ttttggtccctcctttcatcacgtcagcagaatctgcata 29444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 24651078 - 24650934
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||         || |||||||| |||||||||||| | |||||    
T  24651078 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattct 24650979  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    |||||||||| |||||  || || || || ||||||||| |||||    
T  24650978 tccacttttgatccctcctttcatcacgtcagcagaatccgcata 24650934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 31800018 - 31799875
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||        |||||||||||||||| |||||||||| |||||    
T  31800018 agggaaaatacctcttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattct 31799920  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||| |||||| |||||  || || || || |||||||| ||||||    
T  31799919 tcctcttttgatccctcctttcatcacgtcagcagaatttgcata 31799875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 18336467 - 18336582
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||| |        ||||||||||||||||||||||||||| |||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  176 tccacttttggtccct 191  Q
    ||| |||||| |||||    
T  18336567 tccgcttttgatccct 18336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 4919366 - 4919254
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||||         | |||||||||||||||||||||||| |||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgta-aaaaaaaaaattagattttgtccctgtaatttcagattcttc 4919268  T
Q  178 cacttttggtccct 191  Q
     ||||||| |||||    
T  4919267 tacttttgatccct 4919254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 6817500 - 6817388
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||| |||||||| | || |||||||||||||||||   |||||||| |||||         ||||||||||||||||||||||||||||||||    
T  6817500 agggttaatatctcttttcattcccgtaatattagcgaattttaattttagtctctgtaaaaaaaaaaatttagattttgtccctgtaatttcatattct 6817401  T
Q  176 tccacttttggtc 188  Q
    |||||||||||||    
T  6817400 tccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 20959402 - 20959330
Alignment:
Q  144 atttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctg 216  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||  | |||  ||||||| |||||||||||    
T  20959402 atttagattttgtccctgcaatttcagattcctccacttttggtcgttcatttaaccatgttagcagaatctg 20959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 28071877 - 28071825
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 128  Q
    ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  28071877 agggttaataccccttttggtccctgtaatatgagcgaatttcggttttagtc 28071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 20709407 - 20709290
Alignment:
Q  156 tccctgtaatttcatattcttccacttttggtcccttattccac----catgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgg 251  Q
    ||||||||||||||||||| ||||||||| |||||| |||  ||    |||||| ||||| |||||  || ||    || ||||||||||||||||||||    
T  20709407 tccctgtaatttcatattcctccactttttgtccctcattttacgtgccatgtatgcagattctgctgacgtg----gtgaaatgagggaccaaaagtgg 20709312  T
Q  252 aggaatctgaaattacagggac 273  Q
    | |||| |||||||||||||||    
T  20709311 aagaatttgaaattacagggac 20709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 41424515 - 41424655
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||| |||||||||||| |||| || |||||||||||||| ||||||  |||| ||||          |||||||| ||||||||| |||||| |||||    
T  41424515 agggttaatacctcttttggtccttgcaatattagcgaattccggtttaggtccttgtaaaaaaaaaagtttagattctgtccctgtcatttcagattct 41424614  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctg 216  Q
    ||||||||| |||||| |||  | ||||| |||| ||||||    
T  41424615 tccacttttagtccctcatttaaacatgtcagcaaaatctg 41424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 30512405 - 30512363
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggacca 30512363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 30552745 - 30552703
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggacca 30552703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 6817241 - 6817200
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  6817241 aaatgagggaccaaaagtggaagaatctgaaattacatggac 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 20947056 - 20947097
Alignment:
Q  227 acgtaaaatgagggaccaaaagtggaggaatctgaaattaca 268  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  20947056 acgtgaaatgagtgaccaaaagtggaggaatctgaaattaca 20947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 23979160 - 23979201
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  23979160 aaatgagggaccaaaagtggaagaatttgaaattacagggac 23979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 4919108 - 4919068
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  4919108 aatgagggaccaaaagtggaagaatatgaaattacagggac 4919068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 27159104 - 27159068
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggac 27159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 31799754 - 31799718
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||||||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggac 31799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 994003 - 994046
Alignment:
Q  230 taaaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||    
T  994003 taaaaggagggaccaaaagtggaagaatctgcaattacagggac 994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 270
Target Start/End: Complemental strand, 17762397 - 17762363
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagg 270  Q
    ||||||||||||||||| |||||||||||||||||    
T  17762397 gagggaccaaaagtggaagaatctgaaattacagg 17762363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 20947053 - 20947011
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggacc 274  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||    
T  20947053 aaatgagggactaaaaatggaggaatctgaaattacagagacc 20947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 32233967 - 32234013
Alignment:
Q  145 tttagattttgtccctgtaatttcatattcttccacttttggtccct 191  Q
    |||||||||||||||| | |||| | |||||||||||||||||||||    
T  32233967 tttagattttgtccctatcatttgagattcttccacttttggtccct 32234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 993937 - 993974
Alignment:
Q  237 agggaccaaaagtgg-aggaatctgaaattacagggac 273  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  993937 agggaccaaaagtgggaggaatctgaaattacagggac 993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 7126180 - 7126217
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  7126180 gagggaccaaaagtggaagaatatgaaattacagggac 7126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 14144020 - 14143979
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||| |||||||||||| |||| |||||||||||||||    
T  14144020 aaatgaggtaccaaaagtggaagaatatgaaattacagggac 14143979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 17762542 - 17762575
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaatta 266  Q
    |||||||||||||||||||| |||||||||||||    
T  17762542 aatgagggaccaaaagtggaagaatctgaaatta 17762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 20959358 - 20959391
Alignment:
Q  240 gaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||||||||| |||||||    
T  20959358 gaccaaaagtggaggaatctgaaattgcagggac 20959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 22571196 - 22571159
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacag 269  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22571196 aaatgagggaccaaaagtggaagaatatgaaattacag 22571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 41001616 - 41001653
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  41001616 gagggaccaaaagtggaagaatctgaaattatagggac 41001653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 41424635 - 41424594
Alignment:
Q  232 aaatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  41424635 aaatgagggactaaaagtggaagaatctgaaatgacagggac 41424594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 993865 - 993825
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  993865 aatgagggaccaaaagtggaagaatatgaaattacaaggac 993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 7126031 - 7125995
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggac 7125995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 7126113 - 7126077
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  7126113 gtccctgtaatttcaaattcctccacttttggtccct 7126077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 14144165 - 14144201
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggac 14144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 14411812 - 14411780
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattaca 268  Q
    ||||||||||||||||| |||||||||||||||    
T  14411812 gagggaccaaaagtggaagaatctgaaattaca 14411780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 14411926 - 14411966
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| ||||| ||||||||||||||| ||||    
T  14411926 aatgagggaccaaacgtggaagaatctgaaattacaaggac 14411966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 18336638 - 18336674
Alignment:
Q  155 gtccctgtaatttcatattcttccacttttggtccct 191  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtccct 18336674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 18336720 - 18336756
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggac 18336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 22571432 - 22571404
Alignment:
Q  100 tgtaatattagcgaatttcggttttagtc 128  Q
    |||||||||||||||||||||||||||||    
T  22571432 tgtaatattagcgaatttcggttttagtc 22571404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 24837287 - 24837247
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24837287 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24837247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 29445070 - 29445106
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggac 29445106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 41001471 - 41001431
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||| |||||||||||||| |||| |||||||||||||||    
T  41001471 aatgaaggaccaaaagtggaagaatatgaaattacagggac 41001431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 119; Significance: 8e-61; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 3868 - 4067
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||| |||||||||||||||| |||||    
T  3868 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattct 3967  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||| |||||| || ||| |||||||| ||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  3968 tccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtggaggaatatgaaattacagtgacca 4067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 4061 - 4029
Alignment:
Q  159 ctgtaatttcatattcttccacttttggtccct 191  Q
    |||||||||||||||| ||||||||||||||||    
T  4061 ctgtaatttcatattcctccacttttggtccct 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 275
Target Start/End: Complemental strand, 8700 - 8503
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattctt 176  Q
    ||||||||||  ||||| || |||| |||||||||||||| |||||||||||||| ||        ||||||||||||||||||||||||| | ||||||    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  177 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  8600 ccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaaaatggaggaatctgaaattacaaggacca 8503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 8324 - 8434
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| ||||  ||| |||||    
T  8324 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcccagtaa--tcagattct 8421  T
Q  176 tccacttttggtc 188  Q
    | |||||||||||    
T  8422 ttcacttttggtc 8434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 8582 - 8622
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  8582 aatgagggaccaaaagtggaagaatctaaaattacagggac 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 78 - 268
Target Start/End: Original strand, 7227 - 7422
Alignment:
Q  78 ggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttc 177  Q
    ||||||||||||||||||||| |||||||||||||||||  ||| ||||| ||||||        |||||||||||||||||||||||||||||||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  178 cacttttggtcccttattccaccatgtaagcagaat----ctgcatacatgacacgtaaaatgagggaccaaaagtgg-aggaatctgaaattaca 268  Q
    |||||| ||||||| ||||||||| | ||||| |||    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  7327 cactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgagggaccaaaagtggtaggaatctgaaattaca 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 7579 - 7466
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-acnnnnnnngatttagattttgtccctgtaatttcatattc 174  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |        ||||||||||||||||||||||||||| ||||    
T  7579 agggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 7480  T
Q  175 ttccacttttggtc 188  Q
    ||| ||||||||||    
T  7479 ttctacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 7344 - 7304
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||| |||||||| |||| |||||||||||||||    
T  7344 aatgagggaccgaaagtggaagaatatgaaattacagggac 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 1785 - 1590
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| ||         | ||||||| ||||| |||||||||| |||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa----aattagattatgtccttgtaatttcagattct 1690  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 275  Q
    |||||||||||||||| |   |||||  | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  1689 tccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaattacaaggacca 1590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 1410 - 1553
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||        |||||||||| |||||||||||||||| |||||    
T  1410 agggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgta-aaaaaaagatttagattatgtccctgtaatttcagattct 1508  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    ||||||||||||||||  || || || || |||||||||| ||||    
T  1509 tccacttttggtccctcctttcatcacgtcagcagaatctacata 1553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 1525 - 1488
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1525 gagggaccaaaagtggaagaatctgaaattacagggac 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 1672 - 1710
Alignment:
Q  235 tgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggac 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 76 - 273
Target Start/End: Complemental strand, 5125 - 4929
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||  |||         |||||||||| ||||||||||||| | |||||    
T  5125 agggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaat-atttagatttagtccctgtaattttagattct 5028  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 273  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  5027 tccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgggagaaatatgaaattacatggac 4929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 4879 - 4937
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 134  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  4879 agggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtccatgta 4937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 5008 - 5048
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  5008 aatgagggaccaaaagtggaagaatctaaaattacagggac 5048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 89; Significance: 6e-43; HSPs: 3)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 286 - 418
Alignment:
Q  143 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggac 242  Q
    |||||||||||| ||||  |||||||| ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||  ||||||||||||||||    
T  286 gatttagattttctccccataatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggac 385  T
Q  243 caaaagtggaggaatctgaaattacagggacca 275  Q
    ||||||| |||||||||||||||||||||||||    
T  386 caaaagtagaggaatctgaaattacagggacca 418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 596 - 487
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    ||||||||||||||||||  || ||| ||||||| |||||| |||||||| ||||||||        |||||||||||||| |  ||||||||| ||| |    
T  596 agggtaaatacctctttttatctctggaatattaacgaattccggttttactccctgtaaaataaaagatttagattttgttc--gtaatttcagattat 499  T
Q  176 tccacttttggt 187  Q
    ||||||||||||    
T  498 tccacttttggt 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 338 - 305
Alignment:
Q  233 aatgagggaccaaaagtggaggaatctgaaatta 266  Q
    |||||||||||||||||||| |||||||||||||    
T  338 aatgagggaccaaaagtggaagaatctgaaatta 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 12355 - 12216
Alignment:
Q  82 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattcttccact 181  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||        ||||||||||||||||||||||||||| |||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  182 tttggtcccttattccaccatgtaagcagaatctgcatac 221  Q
    |||||||| |  || || || || ||||||||||||||||    
T  12255 tttggtccatcctttcatcacgtcagcagaatctgcatac 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 12248 - 12282
Alignment:
Q  239 ggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||| ||||||||||||||||||||    
T  12248 ggaccaaaagtggaagaatctgaaattacagggac 12282  T

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Target: scaffold0352 (Bit Score: 52; Significance: 8e-21; HSPs: 4)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 4666 - 4782
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||||||||||| ||||||| |||||||||||||| | |||||||||||| ||          |||||||| |||||||||||||||| ||||     
T  4666 agggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattcc 4765  T
Q  176 tccacttttggtccctt 192  Q
    |||||||||||||||||    
T  4766 tccacttttggtccctt 4782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 6058 - 5942
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnnga-tttagattttgtccctgtaatttcatattc 174  Q
    |||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||         | |||||||| |||||||||||||||| ||||    
T  6058 agggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagattc 5959  T
Q  175 ttccacttttggtccct 191  Q
     |||||||||| |||||    
T  5958 ctccacttttgatccct 5942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 4781 - 4745
Alignment:
Q  237 agggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||||||||||||||||||||||||||||||||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 5941 - 5978
Alignment:
Q  236 gagggaccaaaagtggaggaatctgaaattacagggac 273  Q
    |||||| |||||||||||||||||||||||||||||||    
T  5941 gagggatcaaaagtggaggaatctgaaattacagggac 5978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 16007 - 15867
Alignment:
Q  76 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtacnnnnnnngatttagattttgtccctgtaatttcatattct 175  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||||||||| |||||         |   ||||||||||||||||||||||||||||    
T  16007 agggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgta----aaaaaaaaaagattttgtccctgtaatttcatattct 15912  T
Q  176 tccacttttggtcccttattccaccatgtaagcagaatctgcata 220  Q
    | ||||||||||| ||  || || || || |||||||||||||||    
T  15911 ttcacttttggtctctcctttcatcacgtcagcagaatctgcata 15867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 210 - 137
Alignment:
Q  145 tttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgca 218  Q
    |||||||||||||||| |||||||| |||| ||||||||| || |||  ||  ||| ||| |||||||||||||    
T  210 tttagattttgtccctataatttcagattcctccacttttagttcctcgtttaaccctgtcagcagaatctgca 137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 274 - 226
Alignment:
Q  83 atacctcttttcgtccctgtaatattagcgaatttcggttttagtccct 131  Q
    ||||| ||||| |||||| ||||||||||||||| | ||||||||||||    
T  274 ataccacttttagtccctataatattagcgaattccagttttagtccct 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 5912 - 5872
Alignment:
Q  77 gggtaaatacctcttttcgtccctgtaatattagcgaattt 117  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  5912 gggttaatacctcttttggtccatgtaatattagcgaattt 5872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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