View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8971_low_117 (Length: 255)
Name: NF8971_low_117
Description: NF8971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8971_low_117 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 37054382 - 37054618
Alignment:
| Q |
1 |
caatttaagttacatgttactactttttaatgaatataggcaatatatatcttaatatattatgatgaattcaatttgaaggtaccttccatccctttgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054382 |
caatttaagttacatgttactactttttaatgaatataggcaatat----cttaatatattatgatgaattcaatttgaaggtaccttccatccctttgg |
37054477 |
T |
|
| Q |
101 |
aatggtaaagccttcataggtgaaatctgttttagcctctctgaatgctcctggtgcaggagagtatagtctcatgctctccaatgcaacatcccatgta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
37054478 |
aatggtaaagccttcataggtgaaatctgttttagcctctctgaatgctcctggtgcaggagagtatagtctcatgctctccaatgcaacagcccatgta |
37054577 |
T |
|
| Q |
201 |
ta-tttagcttctgtatgctatcccaatctagttgtgatgt |
240 |
Q |
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|| |||||||||||||||||||||||||||||||||||||| |
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| T |
37054578 |
tattttagcttctgtatgctatcccaatctagttgtgatgt |
37054618 |
T |
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