View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8971_low_25 (Length: 601)
Name: NF8971_low_25
Description: NF8971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8971_low_25 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0477 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 17 - 585
Target Start/End: Original strand, 4289 - 4857
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4289 |
cagttatgactccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
4388 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4389 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
4488 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4489 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttggccatttttcgccgatcagccaacaa |
4588 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
4589 |
actatcggtatatctcccatatatgggagactggtatggaaattgatactaatgtgaagagagagaaggtaacgaatatgatcaatgaattgatgtcggg |
4688 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
4689 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagttctggtggctgttcatacatgaacttggacaaa |
4788 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaatgctagactaaagtgatttattctatgaaacgtggttctgtg |
585 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||| |
|
|
| T |
4789 |
gtgattaaggaggtcatgcttaaacaatgctagattaaagttatatattctatgaaacgtggttgtgtg |
4857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 300; Significance: 1e-168; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 17 - 544
Target Start/End: Complemental strand, 4622671 - 4622144
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||||||||||||||||| | || | |||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4622671 |
cagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgaccttgtcatgggcgg |
4622572 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| || | ||||||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
4622571 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaagaggaagtacttaaccaccctgcaatt |
4622472 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4622471 |
ggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttggccatttttcgctgatcagccaacaa |
4622372 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| ||||||| | || |||||||| ||| || ||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||| || |
|
|
| T |
4622371 |
actgtagatatatctgcaattcatgggagattggaatcgaaatcaatactaatgtgaaaagagaggaggtgtcgaatctgatcaatgaattgatgtcggg |
4622272 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||| ||||| ||| |||| |||||||||| |||||||||||| |
|
|
| T |
4622271 |
agataaaggaaagaagatgagacaaaaggccatggagttgaaggagaaggcagatgagacgaccagccctggtggttgttcatacaacaacttggacaaa |
4622172 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaat |
544 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
4622171 |
gttattaaggaggtcatgcttaaacaat |
4622144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 17 - 558
Target Start/End: Original strand, 4259757 - 4260298
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||| ||| ||||| | |||||| |||||||||||||||||||||||||||| | ||||| || |
|
|
| T |
4259757 |
cagttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctgacctcattattggtgg |
4259856 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| || |
|
|
| T |
4259857 |
ctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtccgcaagagcaagtactgaaccactcttcagtt |
4259956 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
4259957 |
ggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatcagccaacaa |
4260056 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| | ||| | | |||||||| ||| || |||||| |||||||||||| ||||| |||| |||| |||||||||||| | |||||||| |
|
|
| T |
4260057 |
actgtagatttatttgtaacgaatgggagattggaattgaaattaatactaatgtgaaaagagatgaggtggcgaagctgatcaatgaaattatgtcagg |
4260156 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |
|
|
| T |
4260157 |
agaagaaggaaagaagatgaggcaaaaggtcatggagttgaagaggaaggcagaggagaacaccagtccatctggttattcattgatgaacttggacaaa |
4260256 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaatgctagactaaagtg |
558 |
Q |
| |
|
|| |||||| |||||||||| ||||||| ||||| ||||||| |
|
|
| T |
4260257 |
gttattaagcaggtcatgctcaaacaatactagattaaagtg |
4260298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 544
Target Start/End: Complemental strand, 4626479 - 4625953
Alignment:
| Q |
18 |
agttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggc |
117 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||| | || | |||||| ||||||||||||||||||||||||| ||||| ||||| ||| |
|
|
| T |
4626479 |
agttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgatcttgtgattggtggc |
4626380 |
T |
|
| Q |
118 |
tcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattg |
217 |
Q |
| |
|
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||| |||||||||| |
|
|
| T |
4626379 |
tcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgcaagagaaagtactgaaccatccttcaattg |
4626280 |
T |
|
| Q |
218 |
gtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaa |
317 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||| ||| || |||||||||||||| |
|
|
| T |
4626279 |
gtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgttggccaaattttgctgatcagccaacaaa |
4626180 |
T |
|
| Q |
318 |
ctgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagga |
417 |
Q |
| |
|
||| ||||| | | || |||||||| ||| |||||||| ||| ||||||||| ||| ||| |||| ||| |||||||||| ||||||| ||||| |
|
|
| T |
4626179 |
ttgtagatatatttgcaatgaatgggagattggaatggaaatcgatgctaatgtgaagagggagggggtagagaaactgatcaatgcattgatggcagga |
4626080 |
T |
|
| Q |
418 |
gataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaag |
517 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||| ||| |
|
|
| T |
4626079 |
gataacggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacattagtcccggtggttgttcatacatgaatatggataaac |
4625980 |
T |
|
| Q |
518 |
tgattaaggaggtcatgcttaaacaat |
544 |
Q |
| |
|
||||||| || ||| |||||||||||| |
|
|
| T |
4625979 |
tgattaatgatgtcttgcttaaacaat |
4625953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 19 - 543
Target Start/End: Original strand, 4613323 - 4613847
Alignment:
| Q |
19 |
gttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggct |
118 |
Q |
| |
|
||||||||| |||| |||| ||||||||||||||||||||| | ||| | ||| || ||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4613323 |
gttatgactgcagaaaaactattagagtttgcttggggtttggcgaatagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggct |
4613422 |
T |
|
| Q |
119 |
cgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattgg |
218 |
Q |
| |
|
| || |||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |
|
|
| T |
4613423 |
cagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattgg |
4613522 |
T |
|
| Q |
219 |
tggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaac |
318 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
4613523 |
cggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccatttttcgcggatcagccagcaaac |
4613622 |
T |
|
| Q |
319 |
tgtcag-tatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagga |
417 |
Q |
| |
|
|| ||| ||||| | | || |||||| | ||| ||||||||||| || ||||||| |||||| ||||| ||| ||| |||||||||||||| ||| |
|
|
| T |
4613623 |
tg-cagatatatatgcaatgaatgggaaattgggatggaaattgacaccaatgtgaagagagatgaggtagagaagctggtcaatgaattgatggtggga |
4613721 |
T |
|
| Q |
418 |
gataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaag |
517 |
Q |
| |
|
|| ||||||| ||| |||||||||||||| || |||||||||||||||||||||||| |||| || || | || |||||||| |||||||||||||||| |
|
|
| T |
4613722 |
gagaaaggaaagaaaatgaggcaaaaggcaattgagttgaagaagaaggcagaggaggacacgagaccaggaggttgttcatatatgaacttggacaaag |
4613821 |
T |
|
| Q |
518 |
tgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|||| || ||||| |||| |||||| |
|
|
| T |
4613822 |
tgatcaatgaggtgctgctgaaacaa |
4613847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 543
Target Start/End: Complemental strand, 4564240 - 4563714
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||| ||| | |||||||| || ||||||||||| ||| ||||||| || ||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4564240 |
cagttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattggtgg |
4564141 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| | |||||||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
4564140 |
ctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagtattgaaccacccttcaatt |
4564041 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| || | ||||||||||||| |
|
|
| T |
4564040 |
ggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattctttggtgatcagccaacaa |
4563941 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| ||| | | || |||||||| ||| |||||||| ||||| ||||| | |||||| |||| ||| || ||||||||||||||||||| |
|
|
| T |
4563940 |
actgtagacttatttacaatgaatgggagattgggatggaaatcgatacgaatgtaaagagagaagaggtggagaaacttgtcaatgaattgatgtcagg |
4563841 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| ||||||| ||||||| |||||||||| || |||||||||||||| | ||||| ||||| || || | || |||||||||||||||||||||||| |
|
|
| T |
4563840 |
agagaaaggaaagaagatgcggcaaaaggcaattgagttgaagaagaaagtggaggaaaacacgagagctggaggttgttcatacatgaacttggacaaa |
4563741 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
||||| |||||||| ||||||||||| |
|
|
| T |
4563740 |
gtgatcaaggaggttttgcttaaacaa |
4563714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 580
Target Start/End: Original strand, 4256227 - 4256778
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||| | |||||| | |||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
4256227 |
cagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtgtatcattaggcctgacctcgtcattggtgg |
4256326 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| ||||||||||||||||||||| | |||||||| ||||| | ||| |||||||| ||||||||||||||||||||| ||||| || |
|
|
| T |
4256327 |
ctcctttattttgtcatctgagttt-------------cggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagtt |
4256413 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcag-ccaaca |
315 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| || |||||| |||||| |
|
|
| T |
4256414 |
ggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatcagaccaaca |
4256513 |
T |
|
| Q |
316 |
aactgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcag |
415 |
Q |
| |
|
|||||| | ||| | |||||||| ||| || ||||| |||||||||||| |||||| |||| |||||||||||||||||||||||| | |
|
|
| T |
4256514 |
aactgtagatttatttgtagcgaatgggagattggaattgaaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaattgatgtcgg |
4256613 |
T |
|
| Q |
416 |
gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaa |
515 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| |||||| |||||||||||| ||||| |||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
4256614 |
gagaaaaaggaaagaagatgaggcaaaaggtcatggaattgaagaagaagacagagaagaacaccagcccagctggtcattcattgatgaacttggacaa |
4256713 |
T |
|
| Q |
516 |
agtgattaaggaggtcatgcttaaacaatgctagactaaagtgatttattctatgaaacgtggtt |
580 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||| || ||| ||||||||||||||| |||||| |
|
|
| T |
4256714 |
agttattaaggaggtcatgcttaaacaatactagattatagtaatttattctatgaaatgtggtt |
4256778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 38 - 540
Target Start/End: Complemental strand, 4592739 - 4592237
Alignment:
| Q |
38 |
tgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctga |
137 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || ||| | ||||||||||||||||||||||| ||||||||||| ||| | || |||||||||| || |
|
|
| T |
4592739 |
tgttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatcgga |
4592640 |
T |
|
| Q |
138 |
gtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgc |
237 |
Q |
| |
|
||||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592639 |
gtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgt |
4592540 |
T |
|
| Q |
238 |
ggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctata |
337 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| ||| | |||||||||||||||||||| || |||||||||||||||||| ||| | | || |
|
|
| T |
4592539 |
ggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatg |
4592440 |
T |
|
| Q |
338 |
tatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgag |
437 |
Q |
| |
|
|||||||| ||| |||||||||||||| ||||| | ||||||| |||| ||| || ||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
4592439 |
aatgggagattgggatggaaattgatacgaatgtaaagagagaggaggtggagaaacttatcaatgaattgatggtgggagagaaaggaaagaagatgag |
4592340 |
T |
|
| Q |
438 |
gcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgctt |
537 |
Q |
| |
|
| ||||||| || ||||||||||||||||||||||||||||| || ||| | || |||||||| ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
4592339 |
gaaaaaggcaatcgagttgaagaagaaggcagaggagaacacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgctt |
4592240 |
T |
|
| Q |
538 |
aaa |
540 |
Q |
| |
|
||| |
|
|
| T |
4592239 |
aaa |
4592237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 22 - 562
Target Start/End: Complemental strand, 4516845 - 4516305
Alignment:
| Q |
22 |
atgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgt |
121 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||| | |||||| | ||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
4516845 |
atgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggattattaggcctgaccttgtcattggtggctcgg |
4516746 |
T |
|
| Q |
122 |
ttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtgg |
221 |
Q |
| |
|
||||||||||||| || |||| |||||||| ||| ||||||||| |||| || ||||||||||| |||||| |||| ||||||| |||||| |||| || |
|
|
| T |
4516745 |
ttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgcaagagaaagtgttgaaccatccttcagttggagg |
4516646 |
T |
|
| Q |
222 |
attcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgt |
321 |
Q |
| |
|
||||||||||||||| ||||||||||| || || |||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||||||||| || |
|
|
| T |
4516645 |
attcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtgttggcctttttttgctgagcagccaacaaattg- |
4516547 |
T |
|
| Q |
322 |
cag-tatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagat |
420 |
Q |
| |
|
||| ||||| | | || |||||||| ||| ||||||||||| ||||||| ||||||| |||| ||| |||||||||||||| ||| |||||| |
|
|
| T |
4516546 |
cagatatatttgcaatgaatgggagattggagcagaaattgataccaatgtgaagagagaggaggtggagaagctgatcaatgaattaatggtgggagat |
4516447 |
T |
|
| Q |
421 |
aaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtga |
520 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||| || || |||| |||||||| |||||||||| ||||||| |
|
|
| T |
4516446 |
aaaggaaagaagatgaggcaaaaggccatggaattgaagaagaaggcagaggaggacacaagaccaggtggttgttcatatgtgaacttggaaaaagtga |
4516347 |
T |
|
| Q |
521 |
ttaaggaggtcatgcttaaacaatgctagactaaagtgattt |
562 |
Q |
| |
|
|||||||||| |||| |||||| |||| ||||||||||| |
|
|
| T |
4516346 |
ttaaggaggtgctgctcaaacaaaattagattaaagtgattt |
4516305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 17 - 543
Target Start/End: Complemental strand, 4461652 - 4461126
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | || | |||||| ||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
4461652 |
cagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttatggatcattaggcctgatcttgtcattggcgg |
4461553 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4461552 |
ctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgcaagagcaagtactgaaccacccttcaatt |
4461453 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||| || ||||||||||||||||| || | ||||||||| ||| |
|
|
| T |
4461452 |
ggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggccattctttggtgatcagccagcaa |
4461353 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| | ||| | | | | |||||||| ||| | ||||| |||| |||||| ||| || |||| ||| || |||| ||||||||| || |
|
|
| T |
4461352 |
actgtagatttatttgcaacaaatgggagattggacttgaaatcgataaagatgtgaagagggatgaggtggagaagttggtcaacgaattgatggttgg |
4461253 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| | |||| ||||||||||||||||| |||||| || |||||||||| |||||| | ||||| ||| | || |||||||| ||||||||||||| |
|
|
| T |
4461252 |
agagattggaaagaagatgaggcaaaaggtcatggaattcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaa |
4461153 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|| |||||||| ||| ||||||||||| |
|
|
| T |
4461152 |
gtcattaaggatgtcttgcttaaacaa |
4461126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 17 - 530
Target Start/End: Complemental strand, 4579961 - 4579448
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| |||||||| | ||| | ||| || |||||||||||||||||||||| || |||||||| ||||| |
|
|
| T |
4579961 |
cagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcgg |
4579862 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| | |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4579861 |
ctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacgagctggtgtccgcaagagcaagtactgaaccacccttcaatt |
4579762 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||| ||| || |
|
|
| T |
4579761 |
ggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgttggccatttttcgctgatcacccagtaa |
4579662 |
T |
|
| Q |
317 |
actgtcag-tatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcag |
415 |
Q |
| |
|
||| ||| ||| | | | ||| |||| | | ||| || ||||| || |||||||||| ||||||| |||| ||| ||| | |||||||||||| | |
|
|
| T |
4579661 |
gctg-cagatatttatgcaatacatggaaaattggaattgaaatcgacactaatgtgaagagagaggaggtggagaagctggttaatgaattgatggtgg |
4579563 |
T |
|
| Q |
416 |
gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaa |
515 |
Q |
| |
|
|||| |||| || |||||||||||||||||| || |||||||||||||||| |||||| |||| || ||| | ||||||||||||||||||||||| || |
|
|
| T |
4579562 |
gagagaaagcaaagaagatgaggcaaaaggcaattgagttgaagaagaaggtggaggaggacacgagacctggaggctgttcatacatgaacttggagaa |
4579463 |
T |
|
| Q |
516 |
agtgattaaggaggt |
530 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4579462 |
agtgattaaggaggt |
4579448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 17 - 543
Target Start/End: Complemental strand, 4602318 - 4601792
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||| || ||||| | ||||| || |||||||||||| ||||||| | ||| | ||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
4602318 |
cagttatgacaccccatcaattattagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtgg |
4602219 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| | |||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||| |||| ||||||||||||| || |
|
|
| T |
4602218 |
ctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcgatc |
4602119 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| || |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
4602118 |
ggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaa |
4602019 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| | ||| | || |||||||| |||||||||||| ||||| ||||||| ||||||| || | |||| |||||||||||| |||| | || |
|
|
| T |
4602018 |
actgtagatttatttgtaatgaatgggagattggtatggaaatcgatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccgg |
4601919 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||||| ||| || | |||| |||||||||| |||| |||||||| |
|
|
| T |
4601918 |
agataaaggcaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagactaggtggttgttcatacaagaacctggacaaa |
4601819 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|| ||||||||||| ||||||||||| |
|
|
| T |
4601818 |
gttattaaggaggtgttgcttaaacaa |
4601792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 46 - 543
Target Start/End: Complemental strand, 4617522 - 4617025
Alignment:
| Q |
46 |
tttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgaga |
145 |
Q |
| |
|
||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||| ||||||||||| ||||| | ||||| |||||||||||| | |
|
|
| T |
4617522 |
tttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaa |
4617423 |
T |
|
| Q |
146 |
atgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaa |
245 |
Q |
| |
|
|||||||| |||||||||||||||| || || |||||||||||||| |||| |||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
4617422 |
atgaaattgcagatagaggcctaatagcaagttggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaa |
4617323 |
T |
|
| Q |
246 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
345 |
Q |
| |
|
||||||| |||||| ||||| || ||||| ||||||||||||||||||||||| ||||| ||||||||| ||||| | ||| | || ||||||| |
|
|
| T |
4617322 |
ttcaaccactgaaagtatatgcgctggagtgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggag |
4617223 |
T |
|
| Q |
346 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
445 |
Q |
| |
|
| |||||||||||| ||||| ||||||| ||||||| || | | || |||||||||||| |||| | ||||||||||||| ||| |||| |||||||| |
|
|
| T |
4617222 |
attggtatggaaatcgatacgaatgtgaagagagaggagttggcaaagctgatcaatgaagtgatagccggagataaaggaaagaaaatgaagcaaaagg |
4617123 |
T |
|
| Q |
446 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || |||| |||||||||||||||||| ||||||| |||||||| || ||||||||||| |
|
|
| T |
4617122 |
ccatggagttgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttgaacaaagttattaaggatgtgttgcttaaacaa |
4617025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 540
Target Start/End: Complemental strand, 4586165 - 4585642
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
||||||||||| |||| |||| ||||||||||||||||||||| ||||| | ||| || ||||| ||||||||||| ||||| ||||||||||| || |
|
|
| T |
4586165 |
cagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatggatcattagacctgatcttgtcattggtgg |
4586066 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|| || ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
4586065 |
ttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgcaagagcaagtattgaaccacccttcaatt |
4585966 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| | || ||||||||||||| |
|
|
| T |
4585965 |
ggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattcattgctgatcagccaacaa |
4585866 |
T |
|
| Q |
317 |
actgtcagta-tatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcag |
415 |
Q |
| |
|
||||| || | ||| | | || |||||||| ||| |||||| |||| || ||||||| ||||||| |||| ||| || |||||||||||||| | |
|
|
| T |
4585865 |
actgt-agaattatttgcaatgaatgggagattgggatggaagttgacaccaatgtgaagagagaggaggtggagaagttggtcaatgaattgatggtgg |
4585767 |
T |
|
| Q |
416 |
gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaa |
515 |
Q |
| |
|
|||| || |||| |||||||||||||||||| || ||||||||||||||||| |||||| |||| || ||| | || ||||||||||| |||||||| || |
|
|
| T |
4585766 |
gagagaatggaaagaagatgaggcaaaaggcaatcgagttgaagaagaaggcggaggaggacacgagacctggaggttgttcatacataaacttggaaaa |
4585667 |
T |
|
| Q |
516 |
agtgattaaggaggtcatgcttaaa |
540 |
Q |
| |
|
||||||||||||||| |||||||| |
|
|
| T |
4585666 |
agtgattaaggaggttttgcttaaa |
4585642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 38 - 530
Target Start/End: Complemental strand, 4598679 - 4598187
Alignment:
| Q |
38 |
tgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctga |
137 |
Q |
| |
|
||||||| ||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||| ||||||||||| |||||| || |||||||||| || |
|
|
| T |
4598679 |
tgttagactttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcgga |
4598580 |
T |
|
| Q |
138 |
gtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgc |
237 |
Q |
| |
|
||||| |||||||||||||||||||||| || |||| |||||||||| |||||||||||| | ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
4598579 |
gtttgtgaatgaaatttcagatagaggcttagttgcaagctggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcattgc |
4598480 |
T |
|
| Q |
238 |
ggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctat |
336 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| ||||| |||||||||||||| || |||||||| ||||||| | | ||||| ||| ||||| | | || |
|
|
| T |
4598479 |
ggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactg-cagatatatttgcaat |
4598381 |
T |
|
| Q |
337 |
atatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatga |
436 |
Q |
| |
|
|||||||| ||| || ||||||| |||||||||| ||||||| |||| ||| ||| |||| ||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
4598380 |
gaatgggagattggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgggagataaaggaaagaaaatga |
4598281 |
T |
|
| Q |
437 |
ggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggt |
530 |
Q |
| |
|
|||||||| | || || ||||||| |||||| |||||| | || || | | | || ||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
4598280 |
ggcaaaagacaattgatttgaagatgaaggcggaggaggaaacgagacttggaggttgttcatacatgaacttagagaaagtgattaaggaggt |
4598187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 17 - 543
Target Start/End: Complemental strand, 4557654 - 4557128
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| |||||||| | ||| | ||| || |||||||||||||||||||||| || |||||||| || || |
|
|
| T |
4557654 |
cagttatgacggcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtgg |
4557555 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| || |||||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||| || |||||||||||| | ||||| ||||||||| |
|
|
| T |
4557554 |
ctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgcaagagcaagtattaaaccatccttcaatt |
4557455 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| || ||||||||| ||| |
|
|
| T |
4557454 |
ggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaa |
4557355 |
T |
|
| Q |
317 |
actgtcag-tatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcag |
415 |
Q |
| |
|
|||| ||| ||||| | | ||| |||||||| ||| ||||||||||| || ||||||| |||||| ||||| |||| || |||||||||||||| | |
|
|
| T |
4557354 |
actg-cagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattgatggagg |
4557256 |
T |
|
| Q |
416 |
gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaa |
515 |
Q |
| |
|
| || ||||||| ||||||| || ||||| || ||| |||||| |||||| |||||| |||| || ||| |||| |||||||||||||| ||||| || |
|
|
| T |
4557255 |
gggagaaaggaaagaagatgtggaaaaagataattgagatgaagacgaaggcggaggaggacacgagacctggtggttgttcatacatgaatttggaaaa |
4557156 |
T |
|
| Q |
516 |
agtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
4557155 |
agtgattaaggaggttttgcttaaacaa |
4557128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 40 - 543
Target Start/End: Complemental strand, 4561011 - 4560509
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
139 |
Q |
| |
|
||||||||||||||||||||| |||| | |||||| | ||||| ||||||||||||||||| ||||||||||| |||||| | |||| |||||||| | |
|
|
| T |
4561011 |
ttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgatt |
4560912 |
T |
|
| Q |
140 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
239 |
Q |
| |
|
|| ||| ||||||||||||||||| ||||| || || ||||||||||||||| ||||| |||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
4560911 |
ttt-gaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcgg |
4560813 |
T |
|
| Q |
240 |
atggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatata |
339 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||| ||||||| ||||| | | || | |
|
|
| T |
4560812 |
atggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaa |
4560713 |
T |
|
| Q |
340 |
tgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggc |
439 |
Q |
| |
|
||| ||| ||| | ||||||||||| ||||| | ||| ||| | || ||| ||| |||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
4560712 |
tggaagattggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgtcctgagataaaggaaagaagatgaggc |
4560613 |
T |
|
| Q |
440 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
539 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||| | |||| || ||| | || |||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4560612 |
aaaaggccatggagctgaagaaaaaggcggaggtgtacacgagacctggaggttgttcatacatgaacttggagaaagtgattaaggaggtgttgcttaa |
4560513 |
T |
|
| Q |
540 |
acaa |
543 |
Q |
| |
|
|||| |
|
|
| T |
4560512 |
acaa |
4560509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 41 - 543
Target Start/End: Complemental strand, 4574813 - 4574311
Alignment:
| Q |
41 |
tagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtt |
140 |
Q |
| |
|
|||||||||||||||||||| |||| | || ||| ||||||||||||||||||||||||| ||||||||||| |||||| | |||| |||||||| || |
|
|
| T |
4574813 |
tagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattt |
4574714 |
T |
|
| Q |
141 |
tgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgga |
240 |
Q |
| |
|
| ||| ||||||||||||||||| ||||| || || ||||||||||||||| ||||| ||||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
4574713 |
tttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcgga |
4574614 |
T |
|
| Q |
241 |
tggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatata |
339 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| | ||||||||| ||||||| ||| ||||| | | || | |
|
|
| T |
4574613 |
tggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaaactg-cagatatatttgcaatgaa |
4574515 |
T |
|
| Q |
340 |
tgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggc |
439 |
Q |
| |
|
||||||| ||| | |||||| ||||||||||| | ||| ||| |||| ||| ||| |||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
4574514 |
tgggagattggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggc |
4574415 |
T |
|
| Q |
440 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
539 |
Q |
| |
|
|||| ||||| ||| |||||||||||| |||| | |||| || ||| | || |||||||||| |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4574414 |
aaaaagccattgagctgaagaagaaggtggaggtggacacgagacctggaggttgttcatacacaaacttggagaaagtgattaaggaggtgttgcttaa |
4574315 |
T |
|
| Q |
540 |
acaa |
543 |
Q |
| |
|
|||| |
|
|
| T |
4574314 |
acaa |
4574311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 40 - 544
Target Start/End: Complemental strand, 3172247 - 3171743
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
139 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||| ||||||||||||| ||||||||||| ||||||||||| |||||| || |||||||||| |||| |
|
|
| T |
3172247 |
ttagagtttgcttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagt |
3172148 |
T |
|
| Q |
140 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
239 |
Q |
| |
|
||| ||||||||||||||||||||||||||| || || |||||||| |||||| |||| ||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
3172147 |
ttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcgg |
3172048 |
T |
|
| Q |
240 |
atggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagta-tatctcctatat |
338 |
Q |
| |
|
|||||||||||||| ||||| ||||||| ||| | |||||||||||| |||||||||| || ||||| ||| | ||| || || | ||| | | | |
|
|
| T |
3172047 |
atggaactcaaccacggaaagtgtatgtgctggaatgccaatgttgtgtaggccattttttgctgatcaaccacctaacagt-agaattatttgccaaga |
3171949 |
T |
|
| Q |
339 |
atgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgagg |
438 |
Q |
| |
|
|||| ||| ||| |||||||||||||| ||||| | ||||| | ||||| ||| |||||||| ||||||||| ||||| ||||||| |||||||||| |
|
|
| T |
3171948 |
atggaagattgggatggaaattgataccaatgtaaagagaggggaggtagagaaactgatcaacgaattgatggtgggagagaaaggaaagaagatgagg |
3171849 |
T |
|
| Q |
439 |
caaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgctta |
538 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| | || || | |||| |||||||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
3171848 |
caaagggccatggagttgaagaagaaggcagaggaggatacaagatttggtggttgttcatacatgaacttggataaagtgattaaggaggtcttgctta |
3171749 |
T |
|
| Q |
539 |
aacaat |
544 |
Q |
| |
|
|||||| |
|
|
| T |
3171748 |
aacaat |
3171743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 540
Target Start/End: Complemental strand, 4571501 - 4570978
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| |||||||| | ||| | ||| || ||||||||||||||||||||| || ||||||||||| || |
|
|
| T |
4571501 |
cagttatgacttcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattggtgg |
4571402 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| || |||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||| | |||||| ||||| ||||||| ||||||||| |
|
|
| T |
4571401 |
ctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctcgcaagagaaagtattgaaccatccttcaatt |
4571302 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
||||| ||||||||||| || |||||||||||||| | |||||||||| | | ||||| ||||||||||||| ||||||||| || ||||||||| ||| |
|
|
| T |
4571301 |
ggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgttagccattttttgctgatcagccagcaa |
4571202 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| ||||||| | ||| |||||||| ||| || ||||| ||||||||||||| |||| | |||| |||| || |||||||||||||| || |
|
|
| T |
4571201 |
actgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtggg |
4571102 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||||||||||| |||||||||| |||| |||||| ||||||||||||| |||||| |||| || ||| |||| |||||||||||||||||||| ||| |
|
|
| T |
4571101 |
agataaaggaaagaagatgaggaaaaatataatggagatgaagaagaaggcggaggaggacacgagacctggtggttgttcatacatgaacttggaaaaa |
4571002 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaa |
540 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
4571001 |
gtgattaaggaggttttgcttaaa |
4570978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 40 - 568
Target Start/End: Original strand, 4266792 - 4267320
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
139 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||| | ||||||||||| ||||||||||| ||||||||||| ||||| || ||||||||||||| | |
|
|
| T |
4266792 |
ttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatt |
4266891 |
T |
|
| Q |
140 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
239 |
Q |
| |
|
|| || ||||||||||||||||| ||||| || || |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4266892 |
tttttaaagaaatttcagatagaggactaatagcaagttggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcgg |
4266991 |
T |
|
| Q |
240 |
atggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatata |
339 |
Q |
| |
|
|||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||| || | |||||||||||||||||| | ||| | |||| | |
|
|
| T |
4266992 |
atggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaa |
4267091 |
T |
|
| Q |
340 |
tgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggc |
439 |
Q |
| |
|
||||||| ||| | ||||| |||| ||||||| |||||| | || ||| | |||||||||||||| ||||| ||||||| | ||||| || |
|
|
| T |
4267092 |
tgggagattggactcgaaatcaatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaaaggaaatatgatgaagc |
4267191 |
T |
|
| Q |
440 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
539 |
Q |
| |
|
|||| | | |||||||||||| ||||||||| |||||||| || ||| |||| | |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4267192 |
aaaatgtcttggagttgaagaggaaggcagaagagaacacaagacctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaa |
4267291 |
T |
|
| Q |
540 |
acaatgctagactaaagtgatttattcta |
568 |
Q |
| |
|
||||| ||||| | |||| |||||||||| |
|
|
| T |
4267292 |
acaatactagattgaagtcatttattcta |
4267320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 4299424 - 4299673
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||| ||||||| | |||| | |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4299424 |
cagttatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattggcgg |
4299523 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4299524 |
cttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagctagtgtccacaagaacaagtactgaaccacccttcaatt |
4299623 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatg |
266 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
4299624 |
ggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 35 - 543
Target Start/End: Complemental strand, 4481204 - 4480696
Alignment:
| Q |
35 |
aactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatc |
134 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| | || ||| |||||||||||| |||||| || | ||||||||||| ||||| | | |||||||| |
|
|
| T |
4481204 |
aactcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttgtcattggtggctcagtggtgttgtcatc |
4481105 |
T |
|
| Q |
135 |
tgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcat |
234 |
Q |
| |
|
||||| | ||| ||||||||| ||||||||||||| || || ||||||||||||||| |||| |||||||||||||||| || ||||||||||||||| |
|
|
| T |
4481104 |
tgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcat |
4481005 |
T |
|
| Q |
235 |
tgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagta-tatctcc |
333 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||| | ||| || || | ||| | | |
|
|
| T |
4481004 |
tgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgttgtgttggccattctttgccgatcagccacctaaccgt-agaattatttgc |
4480906 |
T |
|
| Q |
334 |
tatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaaga |
433 |
Q |
| |
|
|| |||||||| ||| | ||||| ||||| ||||||| |||||| | || || | |||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
4480905 |
aatgaatgggagattggactcgaaatcgataccaatgtgaagagagaagatgtggagaggttaatcaatgaattgttggtgggagagaaaggaaagaaga |
4480806 |
T |
|
| Q |
434 |
tgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcat |
533 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||||||||| |||| || ||| |||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4480805 |
tgaagcaaaaggccatggagttgaagaagatggcagaggaggacacaagacctggtggttgttcatacatgaacttggacaaagtgattaaggaggtctt |
4480706 |
T |
|
| Q |
534 |
gcttaaacaa |
543 |
Q |
| |
|
|||||||||| |
|
|
| T |
4480705 |
gcttaaacaa |
4480696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 17 - 540
Target Start/End: Complemental strand, 4470332 - 4469809
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||| | ||| | ||| || |||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
4470332 |
cagttatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcattggcgg |
4470233 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|||| | |||| ||||| ||| ||| |||| ||||||||||||||||||||| | || ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4470232 |
ctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgtcctcaagagcaagtactgaaccacccttcaatc |
4470133 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||| |||||||||||||||||||| || | ||||||| | ||| |
|
|
| T |
4470132 |
ggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattctttggtgatcagctagcaa |
4470033 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
| ||| | ||| | | || |||||||| ||| | ||||| |||| |||||| |||||| |||| ||| || |||||||||||||| || |
|
|
| T |
4470032 |
attgtagatttatttgcaatgaatgggagattggacttgaaatcgataaagatgtgaagagagatgaggtggagaagctagtcaatgaattgatggttgg |
4469933 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| || |||| |||||||||| ||||| ||||||||| |||||||||| |||||| | ||||| ||| | || |||||||| ||||||||||||| |
|
|
| T |
4469932 |
agagaatggaaagaagatgagggaaaagatcatggagttcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaa |
4469833 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaa |
540 |
Q |
| |
|
|| |||||||| ||| |||||||| |
|
|
| T |
4469832 |
gtcattaaggatgtcttgcttaaa |
4469809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 40 - 543
Target Start/End: Complemental strand, 4506363 - 4505860
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
139 |
Q |
| |
|
||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||| ||||| ||||| ||||| | ||||||| || |||| |
|
|
| T |
4506363 |
ttagagtttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagt |
4506264 |
T |
|
| Q |
140 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
239 |
Q |
| |
|
||| |||||||||||||||||| |||| || || ||||||||| |||||||| |||| | || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4506263 |
ttgcaaatgaaatttcagatagaagccttatagcaagctggtgttcacaagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcgg |
4506164 |
T |
|
| Q |
240 |
atggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatata |
339 |
Q |
| |
|
|||||||||||||| |||||||||||| || ||||| |||||| |||||||||| || || | ||||| |||||||||||| | ||| | | || | |
|
|
| T |
4506163 |
atggaactcaaccactgaaagcatatgcgctggagtgccaatgctgtgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaa |
4506064 |
T |
|
| Q |
340 |
tgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggc |
439 |
Q |
| |
|
| ||||| ||| || ||||||||||||||||||| ||||| || ||| ||| ||| || ||||| | ||| ||||| ||||||| ||||||||| |
|
|
| T |
4506063 |
ttggagattggaatcgaaattgatactaatgtgaatagagaaaatgtagagaagctggtcgatgaaattatggttggagagaaaggaaacaagatgagga |
4505964 |
T |
|
| Q |
440 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
539 |
Q |
| |
|
|||||| |||||||||||| |||| |||| ||||| | || || ||| |||| ||||||| |||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
4505963 |
aaaaggtcatggagttgaaaaagagggcaaaggaggatacaagacctggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaa |
4505864 |
T |
|
| Q |
540 |
acaa |
543 |
Q |
| |
|
|||| |
|
|
| T |
4505863 |
acaa |
4505860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 40 - 540
Target Start/End: Original strand, 4489981 - 4490481
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
139 |
Q |
| |
|
||||||||||| ||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||| ||||| ||||| | ||||||||||| | |
|
|
| T |
4489981 |
ttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgatt |
4490080 |
T |
|
| Q |
140 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
239 |
Q |
| |
|
|| ||| ||||||||||||||||| ||||| || || ||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
4490081 |
ttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtgg |
4490180 |
T |
|
| Q |
240 |
atggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagta-tatctcctatat |
338 |
Q |
| |
|
||||||||||| ||| || || |||||||| ||||| ||||||||||||||||||||||| || ||||| ||| | | || || | ||| | | | |
|
|
| T |
4490181 |
atggaactcaatcatggagagtatatgtgctggagtgccaatgttgtgttggccattttttgctgatcaaccacttagcagt-agaattatttgcgaaga |
4490279 |
T |
|
| Q |
339 |
atgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgagg |
438 |
Q |
| |
|
|||||||| ||| ||| |||||||||| ||||| | |||||| ||||| ||| |||||||||||||||||| ||||| ||||||| |||||||||| |
|
|
| T |
4490280 |
atgggagattgggatgaaaattgataccaatgtaaagagagaagaggtagagaaactgatcaatgaattgatggtgggagagaaaggaaagaagatgagg |
4490379 |
T |
|
| Q |
439 |
caaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgctta |
538 |
Q |
| |
|
|||||||| | |||||||||||||||||||| |||| |||| || | |||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4490380 |
caaaaggcgacggagttgaagaagaaggcagcggaggacacgagactcggtggtagttcatacatgaacttggacaaagtgattaaggatgtcatgctta |
4490479 |
T |
|
| Q |
539 |
aa |
540 |
Q |
| |
|
|| |
|
|
| T |
4490480 |
aa |
4490481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 38 - 543
Target Start/End: Original strand, 4514745 - 4515250
Alignment:
| Q |
38 |
tgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctga |
137 |
Q |
| |
|
||||||||||||||||||||||| ||||| | |||||| ||||||| ||||||||||||||||| ||||||||||| ||||| | ||||||| ||||| |
|
|
| T |
4514745 |
tgttagagtttgcttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctga |
4514844 |
T |
|
| Q |
138 |
gtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgc |
237 |
Q |
| |
|
||||| |||||||||| |||||||||||||||| || || ||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4514845 |
gtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgc |
4514944 |
T |
|
| Q |
238 |
ggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctata |
337 |
Q |
| |
|
|||||||||||||||| ||| |||||||| || ||||| |||||| | ||||||| ||| || | ||||| |||||||||||| | ||| | | || |
|
|
| T |
4514945 |
ggatggaactcaaccactgagagcatatgcgctggagtgccaatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatg |
4515044 |
T |
|
| Q |
338 |
tatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgag |
437 |
Q |
| |
|
|||||||| ||| || ||||| |||| ||||||| ||||||| |||| || || |||||||||||||| ||||| ||||||| || ||||| |
|
|
| T |
4515045 |
aatgggagattgggatcgaaatcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaatgaattgatggtgggagagaaaggaaataaaatgag |
4515144 |
T |
|
| Q |
438 |
gcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgctt |
537 |
Q |
| |
|
| |||||| ||||||||||| ||||||||||| ||| |||| || | | | || | ||||||| ||||||||||||||||||| |||||||| ||||| |
|
|
| T |
4515145 |
gaaaaaggttatggagttgaaaaagaaggcagacgaggacactagacttggcgggtcttcatacttgaacttggacaaagtgatcaaggaggtgttgctt |
4515244 |
T |
|
| Q |
538 |
aaacaa |
543 |
Q |
| |
|
|||||| |
|
|
| T |
4515245 |
aaacaa |
4515250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 17 - 540
Target Start/End: Original strand, 4504000 - 4504523
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||| || |||| || ||||||||||||||||||||||| ||||| | |||||| | ||||||||||| ||||||||||| ||||| ||||| || |
|
|
| T |
4504000 |
cagttatgtcttaagataaattgttagagtttgcttggggtttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattggtgg |
4504099 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| | ||||||||||| |||| |||||||| ||| ||||||| || | || || |||||||||||||| |||| |||||||||||||||| |
|
|
| T |
4504100 |
ctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagttggtgtccacaagataaagtgttgaaccacccttcaatc |
4504199 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||| |||||| | ||||| ||||| ||||||||||||||||||||||| | ||||||||| | |
|
|
| T |
4504200 |
ggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgttgtgttggccatttttttctgatcagccactta |
4504299 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
| | | ||| | | | |||||||| ||| ||| | |||||| | ||||| |||||| ||||| ||| || || |||||||||||| || |
|
|
| T |
4504300 |
atagcaacattatttgcgaagaatgggagattgggatgaagattgatgccaatgtacagagagaagaggtagagaaacttattaatgaattgatggtggg |
4504399 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || | | |||| |||||||||||||||||||||||| |
|
|
| T |
4504400 |
agagaaaggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaggacacaagacttggtggttgttcatacatgaacttggacaaa |
4504499 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaa |
540 |
Q |
| |
|
||||||||||| ||| |||||||| |
|
|
| T |
4504500 |
gtgattaaggacgtcttgcttaaa |
4504523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 19 - 527
Target Start/End: Complemental strand, 4568580 - 4568072
Alignment:
| Q |
19 |
gttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggct |
118 |
Q |
| |
|
|||||||||||||| || ||||||||| |||| ||||| |||| | |||||| | ||||||||||||||||||||| | ||||||||||| |||| |
|
|
| T |
4568580 |
gttatgactccagagca---gttagagttctcttgaggttttgccaacagcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggct |
4568484 |
T |
|
| Q |
119 |
cgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattgg |
218 |
Q |
| |
|
| ||||||||||||| ||||||| ||||| || ||| |||||||||| ||| || ||||||||||| ||||||||||| |||||||||||||| |||| |
|
|
| T |
4568483 |
cagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaagagcaagtgttgaaccacccttcagttgg |
4568384 |
T |
|
| Q |
219 |
tggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaac |
318 |
Q |
| |
|
|||||||||||||||| ||||||||||| || | |||||||| ||||| ||||||||||||| |||||||| ||||| | || ||||||||| || |
|
|
| T |
4568383 |
acgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtaccaatgttatgttggccttttttttctgagcagccaacatac |
4568284 |
T |
|
| Q |
319 |
tgtcag-tatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagga |
417 |
Q |
| |
|
|| ||| ||||| | ||| | ||||| || || ||||||||||| ||||||| ||||||| |||| ||| ||||| |||||||| ||| ||| |
|
|
| T |
4568283 |
tg-cagatatatttgtaataagttggagatcggaatcgaaattgatacaaatgtgaagagagaggaggtggagaagctgatgaatgaattaatggtggga |
4568185 |
T |
|
| Q |
418 |
gataaaggaatgaagatgaggcaaaaggccatggagtt---gaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggaca |
514 |
Q |
| |
|
| ||||||| |||||||||||||||||| ||||||| |||||||||||||||| || |||| || ||| ||| | |||||||||||||||||||| |
|
|
| T |
4568184 |
cagaaaggaaaaaagatgaggcaaaaggccgtggagttgaagaagaagaaggcagagaaggacacaagacctggtgattcttcatacatgaacttggaca |
4568085 |
T |
|
| Q |
515 |
aagtgattaagga |
527 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4568084 |
aagtgattaagga |
4568072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 40 - 296
Target Start/End: Complemental strand, 4458101 - 4457844
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatccttttt-gtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgag |
138 |
Q |
| |
|
||||| |||||||||| |||| |||| | |||||| ||||||| |||||| | ||||||||| ||||||||||| |||||| || |||||||||| || |
|
|
| T |
4458101 |
ttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatcttgtcattggtggctcggttgttttgtcatcggat |
4458002 |
T |
|
| Q |
139 |
tttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcg |
238 |
Q |
| |
|
|||| |||||||| ||| ||||||||| |||| || || |||||||||||||| |||| |||||||||||||||| || ||||||||||||||||| | |
|
|
| T |
4458001 |
tttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtg |
4457902 |
T |
|
| Q |
239 |
gatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatt |
296 |
Q |
| |
|
|||| |||||||||| |||||||||||| || ||||| |||||| || |||||||||| |
|
|
| T |
4457901 |
gatgaaactcaaccactgaaagcatatgcgctggagtgccaatgctgcgttggccatt |
4457844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 155 - 543
Target Start/End: Complemental strand, 4493346 - 4492958
Alignment:
| Q |
155 |
cagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccat |
254 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| || | |||||||||| ||| ||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
255 |
tgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggagactggtatg |
354 |
Q |
| |
|
||| ||||||||| ||||| ||||||||||||||||| || || |||||||||||||||||| | || | | || || ||||| ||| | |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgtagattgatttgcaatgaattggagattggagta |
4493147 |
T |
|
| Q |
355 |
gaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggagt |
454 |
Q |
| |
|
||||| |||| ||||| | ||||| || || ||||||| ||||||| | ||| ||||| ||||||| ||||||||| ||| |||| ||||| |
|
|
| T |
4493146 |
gaaatcgataggaatgttaatagagaaaatgtggagaatctggtcaatgagattatggttggagagaaaggaaacaagatgaggagaaaagccacggagt |
4493047 |
T |
|
| Q |
455 |
tgaagaagaaggcagaggagaacaccagt-cctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|||| ||||||||||||||| ||| |||| ||| |||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |
|
|
| T |
4493046 |
tgaaaaagaaggcagaggaggaca-cagtacctggtggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaa |
4492958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 337 - 573
Target Start/End: Original strand, 4299669 - 4299899
Alignment:
| Q |
337 |
atatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatga |
436 |
Q |
| |
|
|||||||||| ||| || ||||| ||||| ||||||| ||||||| |||| || |||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
4299669 |
atatgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggagagaaaggagataagatga |
4299768 |
T |
|
| Q |
437 |
ggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgct |
536 |
Q |
| |
|
| |||||||| | |||||||||| |||||||||||||| | ||| |||| ||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
4299769 |
gacaaaaggcaagggagttgaag------gcagaggagaacactaatccaggtggttgttcgtacatgaacttggacaaagttattaaggaggttctgct |
4299862 |
T |
|
| Q |
537 |
taaacaatgctagactaaagtgatttattctatgaaa |
573 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
4299863 |
taaacaatattagaataaagtgatttattctaggaaa |
4299899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 85 - 263
Target Start/End: Original strand, 4391794 - 4391976
Alignment:
| Q |
85 |
tggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaatt----gcgagctgg |
180 |
Q |
| |
|
||||||||||||| |||||||||||||||| | || | | |||||| || ||||| |||||||||||||||||||||||| ||| | || || ||| |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtgttttgttatatgagtatgagaatgaaatttcagatagaggtctatctagtcgcaagatgg |
4391893 |
T |
|
| Q |
181 |
tgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcat |
263 |
Q |
| |
|
||||| ||||||||||| |||||||||||| |||| |||||||||| || ||||| ||||| |||||| ||||||||||||| |
|
|
| T |
4391894 |
tgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcat |
4391976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 440 - 542
Target Start/End: Original strand, 4392052 - 4392154
Alignment:
| Q |
440 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
539 |
Q |
| |
|
||||||| || |||||||||||||||||| ||||| |||| | ||| |||| | ||||| |||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
4392052 |
aaaaggcgatcgagttgaagaagaaggcaaaggaggacacatgacctggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaa |
4392151 |
T |
|
| Q |
540 |
aca |
542 |
Q |
| |
|
||| |
|
|
| T |
4392152 |
aca |
4392154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 537
Target Start/End: Complemental strand, 4457688 - 4457644
Alignment:
| Q |
493 |
tgttcatacatgaacttggacaaagtgattaaggaggtcatgctt |
537 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| ||||||||| |
|
|
| T |
4457688 |
tgttcatacttgaacttggacaaagtgactaaggaagtcatgctt |
4457644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 543
Target Start/End: Original strand, 4606972 - 4607020
Alignment:
| Q |
495 |
ttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
4606972 |
ttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaa |
4607020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 260; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 17 - 540
Target Start/End: Complemental strand, 3086949 - 3086426
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3086949 |
cagttatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcgg |
3086850 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
3086849 |
ctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgcaagagcaagtattgaatcacccttcaatt |
3086750 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||||| || ||| ||||| |||||||||||||||||||||| | ||||| |||| || |
|
|
| T |
3086749 |
ggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgttggccattttatggagatcaaccaataa |
3086650 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| ||||||| | |||||||||||| ||| || ||||| ||||||||||||| ||||||| |||| ||| |||||||||||||||||| || |
|
|
| T |
3086649 |
actgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatggtggg |
3086550 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||||||||||| ||||||||||||||| | | ||||| |||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
3086549 |
agataaaggaaagaagatgaggcaaaatgtcgcagagttaaagaagaaagcagaagagaacaccagtatcggtggttgttcatacatgaacttggacaaa |
3086450 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaa |
540 |
Q |
| |
|
|| |||||||||||| |||||||| |
|
|
| T |
3086449 |
gttattaaggaggtcttgcttaaa |
3086426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 245; Significance: 1e-135; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 17 - 545
Target Start/End: Original strand, 3322 - 3850
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||||||||||| || || | |||||| | ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3322 |
cagttatgactccaaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattggcgg |
3421 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3422 |
ctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccacaagagcaagtactgatccacccttcaatt |
3521 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||||||||| || |||||||||||| | ||||||||||| || | ||||||||||||| |
|
|
| T |
3522 |
ggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatgctttgttggccattctttggtgatcagccaacaa |
3621 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| | ||| | | | |||||||| ||| | ||||| |||| |||||| |||||| |||| ||| || |||||||||||| | || |
|
|
| T |
3622 |
actgtagatttatttgcaacgaatgggagattggacttgaaatcgatatggatgtgaagagagatgaggtggagaagctagtcaatgaattgacggtggg |
3721 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| || || |||| |||||||||||||| |||||||| |
|
|
| T |
3722 |
agagaaaggaaagaagatgaggcaaaaggccgtggagttaaagaagaaggcagaggagaacactagaccaggtggtcgttcatacatgaacctggacaaa |
3821 |
T |
|
| Q |
517 |
gtgattaaggaggtcatgcttaaacaatg |
545 |
Q |
| |
|
|| ||||||||||| ||||||||||||| |
|
|
| T |
3822 |
gttattaaggaggttttgcttaaacaatg |
3850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 543
Target Start/End: Complemental strand, 1674753 - 1674229
Alignment:
| Q |
19 |
gttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggct |
118 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||| || |||| |||||| | ||||||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
1674753 |
gttatgactccagatcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtggct |
1674654 |
T |
|
| Q |
119 |
cgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattgg |
218 |
Q |
| |
|
| | ||||||||||||||||| ||| ||||||||||||||||||||||| | | ||||||||||||||| |||| |||||||||||||||| || |
|
|
| T |
1674653 |
cagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagtgttgaaccacccttcaatcgg |
1674554 |
T |
|
| Q |
219 |
tggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaac |
318 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
1674553 |
cggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattttttgctgatcagccaacaaac |
1674454 |
T |
|
| Q |
319 |
tgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggag |
418 |
Q |
| |
|
||| | ||| | || |||| ||| |||||||||||||||||| ||||||| ||||||| | ||| || ||||||||||||||| |||| |
|
|
| T |
1674453 |
tgtagatttatttgtaatgaatggaagattggtatggaaattgatacgaatgtgaagagagagggtttggagaagcttatcaatgaattgatggtgggag |
1674354 |
T |
|
| Q |
419 |
ataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagt |
518 |
Q |
| |
|
| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||| |||||||||||||||||||||||||| |
|
|
| T |
1674353 |
agaatggaaaaaagatgaggcaaaaggccatggaattgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagt |
1674254 |
T |
|
| Q |
519 |
gattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
||||||||| || ||||||||||| |
|
|
| T |
1674253 |
gattaaggaagtgttgcttaaacaa |
1674229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 38 - 543
Target Start/End: Original strand, 20863467 - 20863972
Alignment:
| Q |
38 |
tgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctga |
137 |
Q |
| |
|
||||||||||||| ||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||||||||| |||||| | ||||| ||||||| |
|
|
| T |
20863467 |
tgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgc |
20863566 |
T |
|
| Q |
138 |
gtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgc |
237 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| | || ||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
20863567 |
gtttgtgaatgaaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgt |
20863666 |
T |
|
| Q |
238 |
ggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctat |
336 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||| || |||||||| |||||||| ||| || || | | | |
|
|
| T |
20863667 |
ggatggaactcaaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactg-cagatacatttgcaac |
20863765 |
T |
|
| Q |
337 |
atatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatga |
436 |
Q |
| |
|
| |||||||| ||| || |||||||| || ||||| | ||||||| |||| || ||| | |||||||||||| ||||| ||||||| || ||||| |
|
|
| T |
20863766 |
aaatgggagattgggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaattgatggtgggagagaaaggaaggaggatga |
20863865 |
T |
|
| Q |
437 |
ggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgct |
536 |
Q |
| |
|
|||||||| | | |||||||||||||||||||||||| |||| || || || ||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
20863866 |
ggcaaaagacaaatgagttgaagaagaaggcagaggaggacacaagaccggaaggtggttcatatatgaacttggacaaagtgattaaggaggtgttgct |
20863965 |
T |
|
| Q |
537 |
taaacaa |
543 |
Q |
| |
|
||||||| |
|
|
| T |
20863966 |
taaacaa |
20863972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 17 - 543
Target Start/End: Original strand, 16685870 - 16686396
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
||||||||||| |||| |||| ||||||||||||||||||||||||||| | ||| || ||| |||||||||||| |||| ||||||||| |||| |
|
|
| T |
16685870 |
cagttatgactgcagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatggatcattaggtctgatcttgtcatttgcgg |
16685969 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||| || |||||||||||| | ||||| |||||||| |
|
|
| T |
16685970 |
ttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgcaagagcaagtattaaaccatccttcaatc |
16686069 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||| |||||| |||| ||| ||||| ||||||||||||||||||||||| || ||||||||| ||| |
|
|
| T |
16686070 |
ggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgttggccattttttgctgatcagccagcaa |
16686169 |
T |
|
| Q |
317 |
actgtcag-tatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcag |
415 |
Q |
| |
|
| || ||| ||||| | | || |||||||| ||| ||||||||||| || ||||||| |||||| |||| ||| || |||||||||||||| | |
|
|
| T |
16686170 |
aatg-cagatatatttgcaatgaatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtggagaaattggtcaatgaattgatggtgg |
16686268 |
T |
|
| Q |
416 |
gagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaa |
515 |
Q |
| |
|
|||| ||||||| |||||||||| ||||| || || || | | ||||| || || || | || ||| |||| |||||||||||||||||||| || |
|
|
| T |
16686269 |
gagagaaaggaaagaagatgaggaaaaagataattgaactgcaaatgaaggtggacgaagacccgagacctggtggttgttcatacatgaacttggaaaa |
16686368 |
T |
|
| Q |
516 |
agtgattaaggaggtcatgcttaaacaa |
543 |
Q |
| |
|
|||||||| |||||| ||||||||||| |
|
|
| T |
16686369 |
agtgattatggaggttttgcttaaacaa |
16686396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 1969140 - 1969186
Alignment:
| Q |
211 |
tcaattggtggattcttgactcattgcggatggaactcaaccattga |
257 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
1969140 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
1969186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 527
Target Start/End: Complemental strand, 1281643 - 1281133
Alignment:
| Q |
17 |
cagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcgg |
116 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||||| || | ||| | |||||| | ||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
1281643 |
cagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcgg |
1281544 |
T |
|
| Q |
117 |
ctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaatt |
216 |
Q |
| |
|
||| | |||||||||||||| |||| ||||||||||||||||||||||||||| || || ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
1281543 |
ctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcaatc |
1281444 |
T |
|
| Q |
217 |
ggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaa |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1281443 |
ggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacag |
1281344 |
T |
|
| Q |
317 |
actgtcagtatatctcctatatatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcagg |
416 |
Q |
| |
|
||||| | ||| | || |||| ||| |||||||||||| ||||| ||||||| ||||||| |||| | || |||||||||||||||| | || |
|
|
| T |
1281343 |
actgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtggctaagttgatcaatgaattgatagccgg |
1281244 |
T |
|
| Q |
417 |
agataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaa |
516 |
Q |
| |
|
||| |||||| ||| ||||| ||||||||||||| ||||||||| ||| ||||||||||| || || |||| ||||||||||||||||| |||||| |
|
|
| T |
1281243 |
ggatgaaggaaagaatatgagagaaaaggccatggaattgaagaaggcggcggaggagaacactagaccgggtggttgttcatacatgaacttcgacaaa |
1281144 |
T |
|
| Q |
517 |
gtgattaagga |
527 |
Q |
| |
|
||||||||||| |
|
|
| T |
1281143 |
gtgattaagga |
1281133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 40 - 568
Target Start/End: Complemental strand, 24103505 - 24102977
Alignment:
| Q |
40 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
139 |
Q |
| |
|
||||||||||||||||||||| ||||| | ||||| | ||||||||||| ||||||||||| ||||||||||| ||||| || ||||||||||||| | |
|
|
| T |
24103505 |
ttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatt |
24103406 |
T |
|
| Q |
140 |
ttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcgg |
239 |
Q |
| |
|
|| || ||| ||||||||||||| ||||| || || |||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24103405 |
tttttaaagaagtttcagatagaggactaatagcaagttggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcgg |
24103306 |
T |
|
| Q |
240 |
atggaactcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatata |
339 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| || | ||||| |||||||||||| | ||| | |||| | |
|
|
| T |
24103305 |
atggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaa |
24103206 |
T |
|
| Q |
340 |
tgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggc |
439 |
Q |
| |
|
||||||| ||| | ||||| ||||| ||||||| |||||| | || ||| | |||||||||||||| ||||| || |||| || ||||| || |
|
|
| T |
24103205 |
tgggagattggactcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaacggaaagacgatgaagc |
24103106 |
T |
|
| Q |
440 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
539 |
Q |
| |
|
|||||| | ||||||| |||||||||||||| |||||||| || || |||| | |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24103105 |
aaaaggtcttggagttcaagaagaaggcagaagagaacacaagatctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaa |
24103006 |
T |
|
| Q |
540 |
acaatgctagactaaagtgatttattcta |
568 |
Q |
| |
|
||||| ||||| |||||| |||||||||| |
|
|
| T |
24103005 |
acaattctagattaaagtcatttattcta |
24102977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 62 - 527
Target Start/End: Original strand, 27999747 - 28000212
Alignment:
| Q |
62 |
ccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatag |
161 |
Q |
| |
|
||||||| |||||| | ||||||||||||| ||||||| | ||||||||||| ||||| | ||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
27999747 |
ccaattgcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatag |
27999846 |
T |
|
| Q |
162 |
aggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagc |
261 |
Q |
| |
|
||||||||| | | ||||||||||||||| |||| |||||||||||||||| | || ||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
27999847 |
aggcctaatatcaaattggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagc |
27999946 |
T |
|
| Q |
262 |
atatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggagactggtatggaaattg |
361 |
Q |
| |
|
||||| || ||||| ||||||||||||||| ||||||| || |||||||||||||||||| | ||| | || |||| ||| |||||||||||||| |
|
|
| T |
27999947 |
atatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattg |
28000046 |
T |
|
| Q |
362 |
atactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggagttgaagaa |
461 |
Q |
| |
|
||| ||||||| || |||| | | ||| || ||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28000047 |
atatgaatgtgaagatagaggatttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaaggccatggagttgaagaa |
28000146 |
T |
|
| Q |
462 |
gaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaagga |
527 |
Q |
| |
|
||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28000147 |
aaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaagga |
28000212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 20155247 - 20155297
Alignment:
| Q |
208 |
ccttcaattggtggattcttgactcattgcggatggaactcaaccattgaa |
258 |
Q |
| |
|
||||||||||| ||||||||||| ||||| |||||||| ||||| |||||| |
|
|
| T |
20155247 |
ccttcaattggaggattcttgacacattgtggatggaattcaacaattgaa |
20155297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 157 - 321
Target Start/End: Original strand, 3428 - 3591
Alignment:
| Q |
157 |
gatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattg |
256 |
Q |
| |
|
|||| ||||||| | || || |||||||| |||||||||| |||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
3428 |
gatataggcctagtcgcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattg |
3526 |
T |
|
| Q |
257 |
aaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgt |
321 |
Q |
| |
|
||||||| ||| | ||||| |||||| || |||||||||||||| |||| || ||||||||||| |
|
|
| T |
3527 |
aaagcatttgttctggagttccaatgctgcgttggccatttttccccgaacactcaacaaactgt |
3591 |
T |
|
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Target: scaffold0475; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 3165 - 3261
Alignment:
| Q |
70 |
aagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcc |
166 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||||||||||||||||||| || | | ||||| || ||||||||||||||||| |||||||||||||| |
|
|
| T |
3165 |
aagaaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggcc |
3261 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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