View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8971_low_4 (Length: 1197)
Name: NF8971_low_4
Description: NF8971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8971_low_4 |
 | |
|
| [»] scaffold0627 (3 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 950; Significance: 0; HSPs: 43)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 950; E-Value: 0
Query Start/End: Original strand, 9 - 1018
Target Start/End: Complemental strand, 8644951 - 8643942
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccattagtaatttgcaatccagtcactggggagtttat |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644951 |
agtttggtgttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccattagtaatttgcaatccagtcactggggagtttat |
8644852 |
T |
|
| Q |
109 |
aagacttcctaaagctactgcgactcttatccacaatgacatagtggataaggtatcaggtattgctggttttggcttccaacctaaaactaatgaatat |
208 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8644851 |
aagacttcctaaagctactgcgaatcttatccacaatgacatagtggataaggtatcaggtattgctgcttttggcttccaacctaaaactaatgaatat |
8644752 |
T |
|
| Q |
209 |
aaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattgtccttgagataaacacacttggaacatcatcatgga |
308 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8644751 |
aaggtgatgtatatttgggacaaatatgttagacgaggcaatggctgggtgtttgatcatattgtccttgagataaacacacttggaacaccatcatgga |
8644652 |
T |
|
| Q |
309 |
gaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccacttatgttaatggtgcgcttcattggatcagatttgagga |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644651 |
gaaatgctgaagtagatcctcaaatttctattggatcaggtttgagtcttcattatcccacttatgttaatggtgcgcttcattggatcagatttgagga |
8644552 |
T |
|
| Q |
409 |
tgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcctccagtgtttcaaaatcaaaataatggatttcgtcgt |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644551 |
tgaagaaaggtctatattgtgtttctgttttgaaagtgagaggttgcaatcatttccttctcctccagtgtttcaaaatcaaaataatggatttcgtcgt |
8644452 |
T |
|
| Q |
509 |
aacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatattcttttcgtgatgttgcaatgtgggttatgaatgaatatggca |
608 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8644451 |
aacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatattcttttcgtgatgttgcaatgtgggttatgaatgaatatgaca |
8644352 |
T |
|
| Q |
609 |
ttggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagacctgattcgcagcgttatggtttatgttggccggtaaaaca |
708 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8644351 |
ttggagaatcatggactaaggtttacaacattgatactttgatcagtcctttgggcagacctgattcgcagcgttatggtttatgttggccggtaaaaaa |
8644252 |
T |
|
| Q |
709 |
ctttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccgagaaacatgctttcaaagtttttcgaattcacggc |
808 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644251 |
ctttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccaagaaacatgctttcaaagtttttcgaattcacggc |
8644152 |
T |
|
| Q |
809 |
acttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccact |
908 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
8644151 |
atttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatactgagatgctgaatatccact |
8644052 |
T |
|
| Q |
909 |
caaggtgagaatgtagctgctaagattttattttgattgacaaattgaatttgatgctcccttacaaatcatacaaaccctttcccctaaatatatatgt |
1008 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8644051 |
caaggtaagaatgtagctgctaagattttattttgattgacaaattgaatttgatgctcccttacaaatcatacaaaccctttcccctaaatatatatgt |
8643952 |
T |
|
| Q |
1009 |
gagcttccta |
1018 |
Q |
| |
|
|||||||||| |
|
|
| T |
8643951 |
gagcttccta |
8643942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 175 - 961
Target Start/End: Complemental strand, 8637440 - 8636654
Alignment:
| Q |
175 |
tggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattgtc |
274 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| || |||| ||| |||||| |||||||||| | ||||||||||||| ||| ||| |
|
|
| T |
8637440 |
tggttttggtttccaacctaaaactaatgaatataaggtgataagaatatggggcagtgatgttaaacgaggcaatcgttgggtgtttgatcgtatggtc |
8637341 |
T |
|
| Q |
275 |
cttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccacttatg |
374 |
Q |
| |
|
||||||||| | |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| | | |||| ||||||||||| || |
|
|
| T |
8637340 |
cttgagatatatacacttggaacaccatcatggagaaatgctgaagtggatccccaaatttctattggatcaaatatatggcttcgttatcccacttgtg |
8637241 |
T |
|
| Q |
375 |
ttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcctcc |
474 |
Q |
| |
|
| |||||| || ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8637240 |
tgaatggtacgattcattggatcagatttaagggtcaagaaaggtctatattgtgtttctgtttagaaaatgagaggttgcaatcatttccttctcctcc |
8637141 |
T |
|
| Q |
475 |
agtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatattcttttcgt |
574 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||| || ||| ||| |
|
|
| T |
8637140 |
agtgttacaaaatcaaaataatggatttcgtcataacgagtgtattcgcattggagaattaaggggattactttatatttgtgatacatcttttttccgt |
8637041 |
T |
|
| Q |
575 |
gatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagacctgatt |
674 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
8637040 |
gatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaacatcgatactttggtcagtcctttgggcagacctgatt |
8636941 |
T |
|
| Q |
675 |
cgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccga |
774 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8636940 |
cgcagcgttatggtatatgatggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccga |
8636841 |
T |
|
| Q |
775 |
gaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtg |
874 |
Q |
| |
|
||||| || ||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8636840 |
gaaacttggtttcaaagtttttagaattcaaggcacttcttccgagtttgttgaaataattccacatgttccaagtctaatctcattgaaggatgtcgtg |
8636741 |
T |
|
| Q |
875 |
aaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagctgctaagattttattttgattgacaaattgaatttg |
961 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| ||||||||| | |||| |||||||||||||||| |||| ||||||| |
|
|
| T |
8636740 |
aaaggagacaatatcgaggtgctgaatatccactcaaggttagaatgtagattctaacattttattttgattgagaaatcgaatttg |
8636654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 259 - 935
Target Start/End: Complemental strand, 8678304 - 8677618
Alignment:
| Q |
259 |
gtttgatcatattgtccttgagataaacacacttggaa-catcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatct |
357 |
Q |
| |
|
|||||||| ||| ||||||||||||||||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || |
|
|
| T |
8678304 |
gtttgatcgtatgatccttgagataaacacaattggaaacaccatcatggagaaatgctgaagtggatcctcaaatttctattggatcagatttgaggct |
8678205 |
T |
|
| Q |
358 |
tcattatcccacttatgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaa |
457 |
Q |
| |
|
| ||||||||||| | ||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
8678204 |
ccgttatcccacttgtattaatggtgcgcttcattggatcggatttgagggtcaagaaatgtctatattgtgtttctgtttagaaactgagaagttgcaa |
8678105 |
T |
|
| Q |
458 |
tcatttccttctcctccagtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcg |
557 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||| ||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
8678104 |
tcatttccttctcctccagtatttcaaaatcataataatggatttcgttgtaacaagcgtattcacatgggaaaattaagaggattactttacatttgcg |
8678005 |
T |
|
| Q |
558 |
atacatattcttttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtc----- |
652 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |
|
|
| T |
8678004 |
atacatatcctttccgtgatgttgcaatgtgggatatgaatgaatatggcattggagaatcatggactaaggtttacaacattgatattgtggtccgtcc |
8677905 |
T |
|
| Q |
653 |
----agtcctttgggcagacctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgc |
748 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8677904 |
tgtcagtcctttgggcagacctgattcgcggcattatggtttatgttggccggtaaaacactttgaagagggtgctgccatattgttatatcattcctgc |
8677805 |
T |
|
| Q |
749 |
aattgtcttatctactatgaacccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaa |
848 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8677804 |
aattgtcttatctactatgaacccgagaaacatggtttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaa |
8677705 |
T |
|
| Q |
849 |
gtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagctgctaagatt |
935 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8677704 |
gtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtaagaatgtagctgctaagatt |
8677618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 173 - 942
Target Start/End: Complemental strand, 8536070 - 8535307
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| | || |||| ||| |||||| ||| | ||||| |||| |||||| | | | |
|
|
| T |
8536070 |
gctggttttggtttccaacctaaaactaatgaatataaggtgataaacatgtgggtgagacatgttaaacgtgccaatgtgtgggagtttgagcgtttga |
8535971 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||| || | || ||| | |||||||||| |
|
|
| T |
8535970 |
cccttgagataaacacacttggaaccccatcctggagaaatgttgaagtggatcctcaaatttctttt---------tcgagtctaaagtatcccacttg |
8535880 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| |||||||| || |||||| | |||||||| | | ||||||| |||||| |||||| || |||||||||| | || | ||||||||||||||| |
|
|
| T |
8535879 |
tgtgaatggtgcactacattggctaagatttgatggtctgcaaaggtcaatattgattttctgctttgaaagtgagacgctgaagtcatttccttctcct |
8535780 |
T |
|
| Q |
473 |
ccag---tgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatac-atattct |
568 |
Q |
| |
|
||| ||||| |||||| ||||||||||||| | |||| | |||| ||||||||||||||| |||||| ||||||||||| ||| | | || | |
|
|
| T |
8535779 |
ccacagatgtttggaaatcataataatggatttcttagtaatagacatattagcatgggagaattaaagggatttctttacatttgtgattcgacctttt |
8535680 |
T |
|
| Q |
569 |
tttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagac |
668 |
Q |
| |
|
| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| || || | |
|
|
| T |
8535679 |
tatc-tgatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacattgatacttcattcaatccttcggaaagtc |
8535581 |
T |
|
| Q |
669 |
ctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatga |
768 |
Q |
| |
|
|| | | | | | ||||||||| | ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8535580 |
gtgttccacggagatatggtttaagctggccaataaaacactttgaagaaggtgctgccatattgttatatcattcctgcaattgttttatctactatga |
8535481 |
T |
|
| Q |
769 |
acccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggat |
868 |
Q |
| |
|
||| |||||| ||| ||| |||||||||||||| |||| | | ||| | ||| ||||| |||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
8535480 |
acctgagaaatatggattcgaagtttttcgaatttacgggagtagttcaaatttttttgaagtaatcccacacattccaagtctaatttcattgaaggat |
8535381 |
T |
|
| Q |
869 |
gttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagctgctaagattttatttt |
942 |
Q |
| |
|
||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
8535380 |
gttttgaaaggtgacaatattgaggttctgaatatccactcaaggtaagaatgtagcttctaagattttatttt |
8535307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 273 - 942
Target Start/End: Original strand, 9074363 - 9075020
Alignment:
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
||||| |||||||||||||||||||| || || |||||||| |||||| ||||||||||||||| || |||| ||| | |||||||||| |
|
|
| T |
9074363 |
tccttcagataaacacacttggaacaacaatattgagaaatgttgaagtggatcctcaaatttctttt---------ttgagtctcgagtatcccacttg |
9074453 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| |||||||| ||||||||||| |||| ||| || | ||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
9074454 |
tgtgaatggtgcacttcattggataagatatgaaaatcagcaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcct |
9074553 |
T |
|
| Q |
473 |
cca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcga-tacatattct |
568 |
Q |
| |
|
|| |||||| ||| || |||| |||| || | |||| | ||| |||||||||||||| |||||| ||||||||||| || | | ||| | |
|
|
| T |
9074554 |
ccgcatgtgtttggaaaccataatagtggaattgttgataacagacatat---catgggagaattaaagggatttctttacatttgtgactggacatttt |
9074650 |
T |
|
| Q |
569 |
tttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagac |
668 |
Q |
| |
|
| || ||||||| || |||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||| | ||| ||||| |||| | | |
|
|
| T |
9074651 |
tatc-tgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcgggctgtc |
9074749 |
T |
|
| Q |
669 |
ctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatga |
768 |
Q |
| |
|
| | | | ||| |||||||| |||| |||||||||||||||| || |||||||||||||||||||||| || ||||||| |||||| |||||| |
|
|
| T |
9074750 |
ttattacatggggttcaggtttatg---gccgataaaacactttgaagaaggtgctgccatattgttatatcattgctacaattgttttatcttctatga |
9074846 |
T |
|
| Q |
769 |
acccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggat |
868 |
Q |
| |
|
||| |||||| ||| |||||||||||||||||||| || | | ||| | ||| ||||| |||| |||||| ||||||||||||| |||||||||||| |
|
|
| T |
9074847 |
acctgagaaatatggattcaaagtttttcgaattcatgggagtcattcaaagttttttgaagtaatcccacatattccaagtctaatttcattgaaggat |
9074946 |
T |
|
| Q |
869 |
gttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagctgctaagattttatttt |
942 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| | |||||||| |
|
|
| T |
9074947 |
gtcttgaaaggagacaatatcgaggtgctgaatatccactcaaggtaagaatgtagcttctaatactttatttt |
9075020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 159; E-Value: 5e-84
Query Start/End: Original strand, 173 - 914
Target Start/End: Complemental strand, 8529506 - 8528780
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| || | ||| ||| |||||| || | |||| ||||||||||| | | | |
|
|
| T |
8529506 |
gctggttttggattccaacctaaaactaatgaatataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtga |
8529407 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||| || | || ||| | |||||||||| |
|
|
| T |
8529406 |
tccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttt---------tcgagtctaaagtatcccacttg |
8529316 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| |||||||| ||||||||||| |||||||||| | | ||||||| |||||| |||||| || |||| |||||||||||| || |||||||||||| |
|
|
| T |
8529315 |
tgtgaatggtgcacttcattggataagatttgagggtcagcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcgtttccttctcct |
8529216 |
T |
|
| Q |
473 |
cca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatac-atattct |
568 |
Q |
| |
|
||| |||||| |||||| ||||| ||| || ||| || |||| ||||||||||||||| |||||| || |||||||| ||| | | || |
|
|
| T |
8529215 |
ccacatgtgtttggaaatca---taatgttttttgttgtag---gcctattagcatgggagaattaaagggatttctatacatttgtgatccgaccttta |
8529122 |
T |
|
| Q |
569 |
tttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagac |
668 |
Q |
| |
|
| || | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| | ||| |||||||| | |
|
|
| T |
8529121 |
tatc-taatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttggatcg-- |
8529025 |
T |
|
| Q |
669 |
ctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatga |
768 |
Q |
| |
|
|| | | | | ||||||||||| | |||||| |||||||||||||||| || ||||||||||||| ||||||||||| ||||||| ||| |||||| || |
|
|
| T |
8529024 |
-tgttccacggggttatggtttaagctggccgataaaacactttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacga |
8528926 |
T |
|
| Q |
769 |
acccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatt-tgttgaaataattccacatgttccaagtctaatctcattgaagga |
867 |
Q |
| |
|
||| || ||| ||| |||||||||||||||||||| || | || |||| | ||||| |||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
8528925 |
acctgaaaaatatgggttcaaagtttttcgaattcatggga-gtcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaagga |
8528827 |
T |
|
| Q |
868 |
tgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggt |
914 |
Q |
| |
|
|||| ||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
8528826 |
tgttttgaaaggagtcaatattgaggttctgaatatccactcaaggt |
8528780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 1012 - 1182
Target Start/End: Complemental strand, 8643921 - 8643751
Alignment:
| Q |
1012 |
cttcctattttggtattttatttggagaaaggaaaacttgttaagtaataagtagtttttcaagattattccctaatattgttttaattgatataggtgt |
1111 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8643921 |
cttcctattttggcattttatttggagaaaggaaaacttgttaagtaataagtagtttttcaagattattccttaatattgttttaattgatataggtgt |
8643822 |
T |
|
| Q |
1112 |
gcaaatgtcaaattgcatgaagaaaatgaagttctttccttgtctcaacaagttctttgagatttggaatt |
1182 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8643821 |
gcaaatgtcaaattggaagaagaaaatgaagttctttccttgtcacaacaagttctttgagatttggaatt |
8643751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 173 - 947
Target Start/End: Original strand, 1599837 - 1600585
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||||| | || ||| |||||||||| ||| | ||||| | || |||| | | | |
|
|
| T |
1599837 |
gctgcttttggtttccaacctaaaactaatgaatataaggtgataaacatgagggtgagatatgttaaacgtgccaatgcgttggagtttaagattgtga |
1599936 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||| || | || ||| | ||||||||| |
|
|
| T |
1599937 |
tccttgagataaacacacttggaacaccatcctggagaaatgttgaagtggatcctcaaatttctttttg---------gatgcttaagaatcccacttg |
1600027 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| |||||||| ||||||||||| |||| ||||| ||| ||| ||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
1600028 |
tgtgaatggtgcacttcattggataagatatgagggtgagcaaatgtcaatattggttttctgttttgaaagtgagaggttgcagtcatttccttctcct |
1600127 |
T |
|
| Q |
473 |
cca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcga-tacatattct |
568 |
Q |
| |
|
||| | |||| |||||| ||||||||| | || ||||| | | || ||||||||||||||| |||||| ||||||||||| || ||| | || |
|
|
| T |
1600128 |
ccacatgagtttggaaatcataataatggaacttgtggtaacagccatgttagcatgggagaattaaagggatttctttacatttgtgactacctttt-- |
1600225 |
T |
|
| Q |
569 |
tttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagac |
668 |
Q |
| |
|
| || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||| |
|
|
| T |
1600226 |
tatc-tgatgttccaatgtgggttatgaaggaatatggcattgaagaatcatggactaaggtttacaagtacgatacttcattcaatccttt-------- |
1600316 |
T |
|
| Q |
669 |
ctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatga |
768 |
Q |
| |
|
||| | ||| |||||||| |||| || ||||||||||||| || |||||||||||||||||| ||| | |||||| | ||||| ||||| |
|
|
| T |
1600317 |
----ttcatggtgttcgggtttatg---gccgatacaacactttgaagaaggtgctgccatattgttatatgattac---aattgtttaatctattatga |
1600406 |
T |
|
| Q |
769 |
acccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggat |
868 |
Q |
| |
|
||| | |||| || | ||||| |||| |||||| || | | ||| || | | |||||||||| || ||| ||||||||||||| |||||||||||| |
|
|
| T |
1600407 |
acctgcgaaatatcgatgcaaagcttttgaaattcatgggagtcgttcagattgttttgaaataatcccgcatattccaagtctaatttcattgaaggat |
1600506 |
T |
|
| Q |
869 |
gttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagctgctaagattttattttgattg |
947 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||||| |||| |
|
|
| T |
1600507 |
gtcttgaaaggggacaatattgaggtgctgaatatccactcaaggtaagaatgtagcttcaaatattttatttttattg |
1600585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 247 - 941
Target Start/End: Complemental strand, 8641875 - 8641186
Alignment:
| Q |
247 |
caatggctgggtgtttgatcatattgtccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatca |
346 |
Q |
| |
|
|||||||| ||||||||| | | | ||||||||||||||||||||||| || ||||||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
8641875 |
caatggctaggtgtttgagcgtgtgatccttgagataaacacacttggagcaccatcatggagaaatgttgaagtggatcctcagatttctatt------ |
8641782 |
T |
|
| Q |
347 |
ggtttgaatcttcattatcccacttatgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtg |
446 |
Q |
| |
|
| || |||| | |||||||||| ||| ||| ||| |||||||| |||| |||||||| || ||||||| ||||| ||||||||||| ||||||| |
|
|
| T |
8641781 |
---tcgagtcttaagtatcccacttgtgtgaatagtgttcttcattgaatcaaatttgagggggagcaaaggtcaatattatgtttctgtttggaaagtg |
8641685 |
T |
|
| Q |
447 |
agaggttgcaatcatttccttctcctcca---gtgtttcaaaatcaaaataat---ggatttcgtcgtaacgagcgtattcgcatgggagaattaagggg |
540 |
Q |
| |
|
|||| ||| | | |||||||||||||||| |||||| |||||| |||||| ||| ||| | ||||| || |||| |||||||||| |||| ||| |
|
|
| T |
8641684 |
agagattgaagttatttccttctcctccacatgtgtttggaaatcataataataatggaattcatggtaacaggcttattagcatgggagagttaaaggg |
8641585 |
T |
|
| Q |
541 |
attactttacatttgcgatacatattc-----ttttcgt-gatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttac |
634 |
Q |
| |
|
||| | ||||||||| ||| | || ||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8641584 |
atttccttacatttgtgatcgtgactcgacctttttctttgatgtcacagtgtgggttatgaatgaatatggcattggagaatcatggactaaggcttac |
8641485 |
T |
|
| Q |
635 |
aagattgata---ctttggtcagtcctttgggcagacctgat---tcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgcca |
728 |
Q |
| |
|
|| ||||||| ||| |||| | |||||||| |||| | | | |||||||| ||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
8641484 |
aacattgataatacttcagtcaattctttgggctatcctggtctcttttggggttatggtgtatgttggccggtaatacactttgaagatggtgctgcgt |
8641385 |
T |
|
| Q |
729 |
tattgttatatcattcctgcaattgtcttatctactatgaacccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttga |
828 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||||| || | ||||||||| |||||| || |||| ||| ||| ||||| |
|
|
| T |
8641384 |
tatggttatatcattcctgcaattgt-ttatctactatgaacccggga--------tgcaaagttttcaaaattcatgggacttgttcagaaagagttga |
8641294 |
T |
|
| Q |
829 |
aataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagctgc |
928 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| ||| | ||||| ||||||||| ||||||| ||| | |
|
|
| T |
8641293 |
agtaattccacatattccaagtctaatctcattgaaggatgtcgtgaaagg----aatattgaagtgttaaatattcactcaaggcaagaatgttgcttc |
8641198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 679 - 920
Target Start/End: Original strand, 8548128 - 8548369
Alignment:
| Q |
679 |
gcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccgagaaa |
778 |
Q |
| |
|
|||| ||| ||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||| | ||||| ||| |||||| | ||||| ||| |
|
|
| T |
8548128 |
gcgtcatgctttgtgtttgccggtaaaacactttgaagagggtgctgccgtattgttatatcattcattggattgttttacttactataaccccgataaa |
8548227 |
T |
|
| Q |
779 |
catgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaag |
878 |
Q |
| |
|
||| |||||| |||||||||||| ||| ||||||| ||| ||||| |||||| |||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
8548228 |
tatggagtcaaagattttcgaattcatggctcttcttcacaatcatttgaagtaattcaacatattccaagtctaatctcattgaaggatgtcatgaaag |
8548327 |
T |
|
| Q |
879 |
gagacaatattgaggtgctgaatatccactcaaggtgagaat |
920 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
8548328 |
gagacaatattgaggtgctgaatatccactcaaagtaagaat |
8548369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 173 - 647
Target Start/End: Original strand, 2856424 - 2856895
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||| || ||| ||| |||||||||||||| |||| | | ||||||||| | | | | |
|
|
| T |
2856424 |
gctggttttggtttccaacccaaaactaatgaatataaggtgatcataatgtggaacaaatatgttagacgagacaatcgtttggtgtttgagcgtgtag |
2856523 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
| || |||||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||| | |||||| ||| |||| || | |
|
|
| T |
2856524 |
tgctcgagatacacacgctcggaacatcatcatggagaaatgttgaagtggatcctcaaatttcttt---------tttgaagcttttgaatccaacatg |
2856614 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggat---gaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttct |
469 |
Q |
| |
|
||| ||||| || ||||||||||| | |||||| | | || ||| ||| |||||||||||| ||| ||||||||||||||||| || ||||||||| |
|
|
| T |
2856615 |
tgtgaatggcgcacttcattggattatatttgaagcttggcaacaaaagtcaatattgtgtttcaattttgaaagtgagaggttgcagtcgtttccttct |
2856714 |
T |
|
| Q |
470 |
cctcca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatatt |
566 |
Q |
| |
|
|||||| |||||| |||||| |||||||||||| | || | || |||| | |||||||||| | |||||| ||||||||||| ||| || | |
|
|
| T |
2856715 |
cctccacatgtgtttggaaatcatgataatggatttccccatagcatgcctattagattgggagaattgaagggatttctttacatttgtcatagatcgt |
2856814 |
T |
|
| Q |
567 |
cttttcgtg-atgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactt |
647 |
Q |
| |
|
| | ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
2856815 |
c-tctcgagaatgttacaatgtgggttatgaatgaatatggcattggagaatcatggactattgtttacaacattgatactt |
2856895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 173 - 647
Target Start/End: Original strand, 2874034 - 2874505
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||| | |||||||| ||||||||||||||||||||||| || ||| ||| |||||||||||||| |||| | | ||||||||| | | | | |
|
|
| T |
2874034 |
gctggttttagtttccaacccaaaactaatgaatataaggtgatcataatatggaacaaatatgttagacgagacaatcgtttggtgtttgagcgtgtag |
2874133 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
| || |||||| |||| || |||||| ||||||||||||||| |||||| ||||||||||||||| | |||||| ||| |||| || | |
|
|
| T |
2874134 |
tgctcgagatacacacgctcggaacaccatcatggagaaatgttgaagtggatcctcaaatttcttt---------tttgaagcttttgaatccaacatg |
2874224 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggat---gaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttct |
469 |
Q |
| |
|
||| ||||| || ||||||||||| | |||||| | | || ||| ||| |||||||||||| ||| ||||||||||||||||| || ||||||||| |
|
|
| T |
2874225 |
tgtgaatggcgcacttcattggattatatttgaagcttggcaacaaaagtcaatattgtgtttcaattttgaaagtgagaggttgcagtcgtttccttct |
2874324 |
T |
|
| Q |
470 |
cctcca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatatt |
566 |
Q |
| |
|
|||||| |||||| |||||| |||||||||||| | || | || |||| | |||||||||| | |||||| ||||||||||| ||| || | |
|
|
| T |
2874325 |
cctccacatgtgtttggaaatcatgataatggatttccccatagcatgcctattagattgggagaattgaagggatttctttacatttgtcatagatcgt |
2874424 |
T |
|
| Q |
567 |
cttttcgtg-atgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactt |
647 |
Q |
| |
|
| | ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
2874425 |
c-tctcgagaatgttacaatgtgggttatgaatgaatatggcattggagaatcatggactattgtttacaacattgatactt |
2874505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 173 - 647
Target Start/End: Original strand, 2844597 - 2845068
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||| || ||| ||| ||||||||||||| |||| | | ||||||||| | | | | |
|
|
| T |
2844597 |
gctggttttggtttccaacccaaaactaatgaatataaggtgatcataatgtggaacaaatatgttagacgaaacaatcgtttggtgtttgagcgtgtag |
2844696 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
| || |||||| |||| ||||||||| ||||||||||||| | |||||| ||||||||||||||| | |||||| ||| |||| || | |
|
|
| T |
2844697 |
tgctcgagatacacacgcttggaacaccatcatggagaaaggttgaagtggatcctcaaatttcttt---------tttgaagcttttgaatccaacatg |
2844787 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttga---ggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttct |
469 |
Q |
| |
|
||| ||||| || ||||||||||| | |||||| || || ||| ||| |||||||||||| ||| ||||||||||||||||| || ||||||||| |
|
|
| T |
2844788 |
tgtgaatggcgcacttcattggattatatttgaaacggggcaacaaaagtcaatattgtgtttcaattttgaaagtgagaggttgcagtcgtttccttct |
2844887 |
T |
|
| Q |
470 |
cctcca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatatt |
566 |
Q |
| |
|
|||||| |||||| |||||| |||||||||||| | || | || |||| | |||||||||| | |||||| ||||||||||| ||| || | |
|
|
| T |
2844888 |
cctccacatgtgtttggaaatcatgataatggatttccccttagcatgcctattagattgggagaattgaagggatttctttacatttgtcatatatcgt |
2844987 |
T |
|
| Q |
567 |
cttttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactt |
647 |
Q |
| |
|
|| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
2844988 |
ctcttgagaatgttacaatgtgggttatgaatgaatatggcattggagaatcatggactattgtttacagcattgatactt |
2845068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 523 - 968
Target Start/End: Complemental strand, 9003685 - 9003247
Alignment:
| Q |
523 |
catgggagaattaaggggattactttacatttgcgatacatattcttttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatgg |
622 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||| ||| | ||||||||||| ||||||||||| || ||||| || ||| |
|
|
| T |
9003685 |
catgggagaattaaggggatttctttacatttgtgactcatcctctctctttgatgttgcaacttgggttatgaaggagtatgg----------tcttgg |
9003596 |
T |
|
| Q |
623 |
actaaggtttacaagattgatactttggtcagtcctttgggcagacctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagaggggg |
722 |
Q |
| |
|
||||||||||||| |||||||||| | | |||||||||||| |||||| | | | | |||||| |||||||||||||||| ||||||||| | | |
|
|
| T |
9003595 |
actaaggtttacagcattgatacttccgccggtcctttgggcatacctgaatatccgtctagtggtttttgttggccggtaaaactgtttgaagagagtg |
9003496 |
T |
|
| Q |
723 |
ctgccatattgttatatcattcctgcaattgtcttatctactatgaacccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatt |
822 |
Q |
| |
|
|| ||||||||| ||| | || | ||||||| | |||||||||||||||||||||||| |||| |||||||| | ||||||| || || |||| |
|
|
| T |
9003495 |
cttgcatattgttttatgaatcgtacaattgtttagtctactatgaacccgagaaacatggattcagagtttttcaagttcacggggctcaatcaaaatt |
9003396 |
T |
|
| Q |
823 |
tgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccactca---aggtgagaa |
919 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||||||||| | ||| || ||||||||| |||||||| ||||| || ||||| |||| || | |
|
|
| T |
9003395 |
agttgaagtaattccacatattccaagtctaatctcattgaaggaggctgtaaatggagacaatgttgaggtgttgaatgtctactcaaggaggtaagga |
9003296 |
T |
|
| Q |
920 |
tgtagctgctaagattttattttgattgacaaattgaatttgatgctcc |
968 |
Q |
| |
|
||||||| |||| |||| ||||| ||| | |||| ||||||||||||| |
|
|
| T |
9003295 |
tgtagcttctaatatttgattttcattaagtaattaaatttgatgctcc |
9003247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 1049 - 1181
Target Start/End: Complemental strand, 8636422 - 8636291
Alignment:
| Q |
1049 |
ttgttaagtaataagtagtttttcaagattattccctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttcttt |
1148 |
Q |
| |
|
|||||||| ||| | |||||||| | ||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
8636422 |
ttgttaagcaatcaatagtttttta-gattattccctcatattgttttgattgatataggtgtgcaaatgttgaattgccggaagaaaatgaagttcttt |
8636324 |
T |
|
| Q |
1149 |
ccttgtctcaacaagttctttgagatttggaat |
1181 |
Q |
| |
|
|||||||||||||| | ||||||||||||||| |
|
|
| T |
8636323 |
ccttgtctcaacaaactgtttgagatttggaat |
8636291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1073 - 1182
Target Start/End: Complemental strand, 8677623 - 8677513
Alignment:
| Q |
1073 |
aagattattccctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctttccttgtctcaac-aagttctttga |
1171 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||| || || |||| |
|
|
| T |
8677623 |
aagattattcgctaatattgttttaattgatataggtgtgcaaatgttgaattgcgggaagaaaatgaagttctttccttgtcacaacaaatttgattga |
8677524 |
T |
|
| Q |
1172 |
gatttggaatt |
1182 |
Q |
| |
|
||||||||||| |
|
|
| T |
8677523 |
gatttggaatt |
8677513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 582 - 647
Target Start/End: Original strand, 2904938 - 2905003
Alignment:
| Q |
582 |
caatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactt |
647 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
2904938 |
caatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacattgatactt |
2905003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1080 - 1160
Target Start/End: Complemental strand, 8640750 - 8640670
Alignment:
| Q |
1080 |
ttccctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctttccttgtctcaac |
1160 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
8640750 |
ttccctaatattgttttaatttatataggtgtgcaaagtttaaattgggagaagaaaatgaagttttttccttgtctcaac |
8640670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 173 - 475
Target Start/End: Original strand, 2904540 - 2904836
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||| || ||| | | | |||||||||| | ||| | | |||||| || | | | | |
|
|
| T |
2904540 |
gctggttttggtttccaacccaaaactaatgaatataaggtgataataatgtggaataaacatgttagacgggccaacgatttggtgttcgagcgtctag |
2904639 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
| ||||||||| |||| || |||||| |||||||||||||| |||||| ||||||||||||||| || ||||| ||| ||||||| | |
|
|
| T |
2904640 |
tgcttgagatacacacgctcggaacaacatcatggagaaatcttgaagtggatcctcaaatttctttt---------ttgaagcttttgaatcccacatg |
2904730 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatg---aagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttct |
469 |
Q |
| |
|
||| ||||| | | |||||||||| | |||| |||| || ||| ||| |||||||||||| |||| |||||||||||| ||||||||||||||||| |
|
|
| T |
2904731 |
tgtgaatggcggattacattggatcatagttgaagatggtcaacaaaagtcaatattgtgtttcagttttgaaagtgagaggatgcaatcatttccttct |
2904830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 362 - 472
Target Start/End: Original strand, 8547823 - 8547933
Alignment:
| Q |
362 |
tatcccacttatgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcat |
461 |
Q |
| |
|
|||||||||| ||| ||| |||| |||||||||||| ||||| |||| | | |||||||||||||||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
8547823 |
tatcccacttgtgtgaatcgtgcacttcattggatccgatttaaggaaaggggagggtctatattgtgtttttgttttgaaagagagaggtttcaatcat |
8547922 |
T |
|
| Q |
462 |
ttccttctcct |
472 |
Q |
| |
|
||||||||||| |
|
|
| T |
8547923 |
ttccttctcct |
8547933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 824 - 945
Target Start/End: Original strand, 2905126 - 2905250
Alignment:
| Q |
824 |
gttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatatt---gaggtgctgaatatccactcaaggtgagaat |
920 |
Q |
| |
|
|||||| | |||| |||| ||||||||||||| |||||||| ||||| ||||| ||||||||| || ||||||||||| ||| ||||||||| ||| |
|
|
| T |
2905126 |
gttgaagttattcaacatattccaagtctaatatcattgaaagatgtcgtgaatggagacaatgttgaggaggtgctgaacatctactcaaggtagtaat |
2905225 |
T |
|
| Q |
921 |
gtagctgctaagattttattttgat |
945 |
Q |
| |
|
|||||| ||| ||||||||||||| |
|
|
| T |
2905226 |
gtagcttataatattttattttgat |
2905250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 8536222 - 8536113
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccattagtaatttgcaatccagtcactggggagtttat |
108 |
Q |
| |
|
|||||| | ||||||||||||||||||| || ||||||||| | | |||| | |||| |||||||| || ||||| |||||||||||||||||||| |
|
|
| T |
8536222 |
agtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcactggggagtttat |
8536123 |
T |
|
| Q |
109 |
aagacttcct |
118 |
Q |
| |
|
|||||||||| |
|
|
| T |
8536122 |
aagacttcct |
8536113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1078 - 1149
Target Start/End: Complemental strand, 8534772 - 8534701
Alignment:
| Q |
1078 |
tattccctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctttc |
1149 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||| | ||||||| |||||||| ||||||||||| |
|
|
| T |
8534772 |
tattccccaatattgttttaatttatataggtgtgcaaagtttaaattgcgggaagaaaaggaagttctttc |
8534701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 475
Target Start/End: Complemental strand, 9003930 - 9003739
Alignment:
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
||||||||||| |||||| |||||| ||||||||||||||| |||||| ||||||||| | ||||| || || |||| ||||||| |||| |
|
|
| T |
9003930 |
tccttgagata--cacactgggaacaccatcatggagaaatgttgaagtggatcctcaactgtctat---------ttggagtcttaattatccgacttg |
9003842 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| ||||| || |||||||||||||||||||| | ||| ||| |||||||||||| ||| |||| ||||||||| ||||| |||||||| ||| |
|
|
| T |
9003841 |
tgtgaatggcgcacttcattggatcagatttgattttctgcaaatgtcaatattgtgtttcaatttggaaaatgagaggttccaatcttttccttcccct |
9003742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1083 - 1161
Target Start/End: Original strand, 8548782 - 8548860
Alignment:
| Q |
1083 |
cctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctttccttgtctcaaca |
1161 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| | ||||| || |||||||| |||||| |||| ||||||||||| |
|
|
| T |
8548782 |
cctaatattgttttaatttatataggtgtgtaaagtttaaatttcaggaagaaaaagaagttatttcgttgtctcaaca |
8548860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 8678557 - 8678439
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccattagtaatttgcaatccagtcactggggagtttat |
108 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||| || |||||||| ||| || ||| | ||||| || ||| | ||||| |||||||| |
|
|
| T |
8678557 |
agtttggtgttgcgaattcttgcaatggcatgctttgtttgtgttgcccatttgagggacaccctttattgatttgtaacccacttactggcgagtttat |
8678458 |
T |
|
| Q |
109 |
aagacttcctaaagctact |
127 |
Q |
| |
|
|||||||| | |||||||| |
|
|
| T |
8678457 |
aagacttcatgaagctact |
8678439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 8637606 - 8637489
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccattagtaatttgcaatccagtcactggggagtttat |
108 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| || |||| ||| | | || ||| |||||||| || ||||||||||||||||| |
|
|
| T |
8637606 |
agtttggtgttgcgaattcttgcaatggcttgctttgtttgtgttgcccatctgacgaacaccctttatcgatttgcaacccggtcactggggagtttat |
8637507 |
T |
|
| Q |
109 |
aagacttcctaaagctac |
126 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
8637506 |
taaacttcctgaagctac |
8637489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 767 - 891
Target Start/End: Original strand, 2845149 - 2845273
Alignment:
| Q |
767 |
gaacccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaagg |
866 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||| || || ||| | | |||||| ||||| | || ||||||||||||| |||||||| | |
|
|
| T |
2845149 |
gaacctgagaaacatgagttcaaagtttttcgaattcaagggacaactttaggagaagttgaagtaattgaatatattccaagtctaatatcattgaacg |
2845248 |
T |
|
| Q |
867 |
atgttgtgaaaggagacaatattga |
891 |
Q |
| |
|
|||| ||||||||||||||| |||| |
|
|
| T |
2845249 |
atgtcgtgaaaggagacaatgttga |
2845273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 11354043 - 11354079
Alignment:
| Q |
180 |
ttggcttccaacctaaaactaatgaatataaggtgat |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11354043 |
ttggcttccaacctaaaactaatgaatataaggtgat |
11354079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 11373350 - 11373314
Alignment:
| Q |
180 |
ttggcttccaacctaaaactaatgaatataaggtgat |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11373350 |
ttggcttccaacctaaaactaatgaatataaggtgat |
11373314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1076 - 1116
Target Start/End: Original strand, 1601056 - 1601096
Alignment:
| Q |
1076 |
attattccctaatattgttttaattgatataggtgtgcaaa |
1116 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
1601056 |
attattcccaaatattgttttaatttatataggtgtgcaaa |
1601096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 843 - 891
Target Start/End: Original strand, 2857046 - 2857094
Alignment:
| Q |
843 |
ttccaagtctaatctcattgaaggatgttgtgaaaggagacaatattga |
891 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||||||||||||||| |||| |
|
|
| T |
2857046 |
ttccaagtctaatatcattgaacgatgtcgtgaaaggagacaatgttga |
2857094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 2844436 - 2844475
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgttt |
48 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2844436 |
agtttggcattgtgaattcttgcaatggcttgctttgttt |
2844475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 2856269 - 2856308
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgttt |
48 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2856269 |
agtttggcattgtgaattcttgcaatggcttgctttgttt |
2856308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 2873879 - 2873918
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgttt |
48 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2873879 |
agtttggcattgtgaattcttgcaatggcttgctttgttt |
2873918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 2904385 - 2904424
Alignment:
| Q |
9 |
agtttggtgttgtgaattcttgcaatggcttgctttgttt |
48 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2904385 |
agtttggcattgtgaattcttgcaatggcttgctttgttt |
2904424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1078 - 1161
Target Start/End: Complemental strand, 8528207 - 8528124
Alignment:
| Q |
1078 |
tattccctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctttccttgtctcaaca |
1161 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| | ||||||| | |||||| || |||||||| |||||||||| |
|
|
| T |
8528207 |
tattccccaatattgttttaatttctataggtgtgcaaagtttaaattgcggggagaaaaggaggttctttctctgtctcaaca |
8528124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 9074277 - 9074315
Alignment:
| Q |
175 |
tggttttggcttccaacctaaaactaatgaatataaggt |
213 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
9074277 |
tggttttggattccaacctaatactaatgaatataaggt |
9074315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1102 - 1147
Target Start/End: Complemental strand, 8527910 - 8527865
Alignment:
| Q |
1102 |
atataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctt |
1147 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||| |||||| |||| |
|
|
| T |
8527910 |
atataggtgtgcaaatattaaattgcatgaagaagatgaagatctt |
8527865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1102 - 1147
Target Start/End: Original strand, 9075344 - 9075389
Alignment:
| Q |
1102 |
atataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctt |
1147 |
Q |
| |
|
|||||||||||||||| | |||||||||||||| ||||||| |||| |
|
|
| T |
9075344 |
atataggtgtgcaaattttaaattgcatgaagagaatgaagatctt |
9075389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 11353889 - 11353926
Alignment:
| Q |
11 |
tttggtgttgtgaattcttgcaatggcttgctttgttt |
48 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
11353889 |
tttggtgtggtgaattcctgcaatggcttgctttgttt |
11353926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 844 - 901
Target Start/End: Original strand, 11354671 - 11354728
Alignment:
| Q |
844 |
tccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaat |
901 |
Q |
| |
|
|||| |||| |||||||||||||||||||| ||||||| ||| || ||||||| |||| |
|
|
| T |
11354671 |
tccaggtctcatctcattgaaggatgttgttaaaggaggcaacatcgaggtgcagaat |
11354728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 844 - 901
Target Start/End: Complemental strand, 11372722 - 11372665
Alignment:
| Q |
844 |
tccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaat |
901 |
Q |
| |
|
|||| |||| |||||||||||||||||||| ||||||| ||| || ||||||| |||| |
|
|
| T |
11372722 |
tccaggtctcatctcattgaaggatgttgttaaaggaggcaacatcgaggtgcagaat |
11372665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 171; Significance: 3e-91; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 173 - 914
Target Start/End: Complemental strand, 9443667 - 9442941
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| || | ||| ||| |||||| || || |||| ||||||||||| | | | |
|
|
| T |
9443667 |
gctggttttggattccaacctaaaactaatgaatataaggtaataagcgtgtggataagacatgttaaacaagccaatcagtgggtgtttgagcgtgtga |
9443568 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||| || | || ||| | |||||||||| |
|
|
| T |
9443567 |
tccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttt---------tcgagtctaaagtatcccacttg |
9443477 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| |||||||| ||||||||||| |||||||||||||| ||||||| |||||| |||||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
9443476 |
tgtgaatggtgcacttcattggataagatttgaggatgagcaaaggtcaatattggttttctgctttgaaagtgagaggttgcagtcatttccttctcct |
9443377 |
T |
|
| Q |
473 |
cca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatac-atattct |
568 |
Q |
| |
|
||| |||||| ||||| |||||| | | || ||| || |||| ||||||||||||||| |||||| || |||||||| ||| | | || |
|
|
| T |
9443376 |
ccacatgtgtttggaaatc---ataatgtttattgtagta---ggcctattagcatgggagaattaaagggatttctatacatttgtgatccgaccttta |
9443283 |
T |
|
| Q |
569 |
tttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagac |
668 |
Q |
| |
|
| || | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| | ||| |||||||| | |
|
|
| T |
9443282 |
tatc-taatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttgg---atc |
9443187 |
T |
|
| Q |
669 |
ctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatga |
768 |
Q |
| |
|
|| | | | | ||||||||||| | |||||| |||||||||||||||| || ||||||||||||| ||||||||||| ||||||| ||| |||||| || |
|
|
| T |
9443186 |
gtgttccacggggttatggtttaagctggccgataaaacactttgaagaaggtgctgccatattgtcatatcattccttcaattgttttacctactacga |
9443087 |
T |
|
| Q |
769 |
acccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatt-tgttgaaataattccacatgttccaagtctaatctcattgaagga |
867 |
Q |
| |
|
||| || ||| ||| |||||||||||||||||||| || | || |||| | ||||| |||| | ||| ||||||||||||| ||||||||||| |
|
|
| T |
9443086 |
acctgaaaaatatgggttcaaagtttttcgaattcatggga-gtcggaaaaattattttgaagtaatccaacacattccaagtctaatttcattgaagga |
9442988 |
T |
|
| Q |
868 |
tgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggt |
914 |
Q |
| |
|
|||| ||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
9442987 |
tgttttgaaaggagtcaatattgaggttctgaatatccactcaaggt |
9442941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1102 - 1147
Target Start/End: Complemental strand, 9442077 - 9442032
Alignment:
| Q |
1102 |
atataggtgtgcaaatgtcaaattgcatgaagaaaatgaagttctt |
1147 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||||||||||| |||| |
|
|
| T |
9442077 |
atataggtgtgcaaatattaaattacatgaagaaaatgaagatctt |
9442032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 165; Significance: 1e-87; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 173 - 891
Target Start/End: Complemental strand, 35780382 - 35779694
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||| | ||||| ||||||||||||| | || |
|
|
| T |
35780382 |
gctggttttggtttccaacctaaaactaatgaatataaggtgataaaaatatggataagacatgttcaacgtgccaatgattgggtgtttgatcgtgtta |
35780283 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
|||| || ||||||||||||||| || |||||||||||| || |||||| ||||||| ||||||||| ||| | ||| | |||||||||| |
|
|
| T |
35780282 |
tcctcgaaataaacacacttggagcaccatcatggagaactgttgaagtggatcctcgtatttctatt---tcaagc------cttaagtatcccacttg |
35780192 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| ||||||| |||||| ||||||| |||||||| || ||| ||| ||||| ||||| ||||| ||| ||||||||||||| |||||||||||||| |
|
|
| T |
35780191 |
tgtgaatggtgtgcttcactggatcaaatttgaggggcaacaaaagtcaatattatgtttttgttttgaaggtgagaggttgcagccatttccttctcct |
35780092 |
T |
|
| Q |
473 |
cca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcgatacatattctt |
569 |
Q |
| |
|
||| |||||| || ||| ||||| | ||||||| ||||||||||||||| |||||| ||||||||||| || ||| || |
|
|
| T |
35780091 |
ccacatgtgtttggaattcatgataatag---------------gcgtattagcatgggagaattaaagggatttctttacatttgtgacttgaattttt |
35780007 |
T |
|
| Q |
570 |
ttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagacc |
669 |
Q |
| |
|
|| ||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||| |||| ||||| | || | ||| || |
|
|
| T |
35780006 |
ttgttgatgttacaatgtgggttatgaatgagcatggcattgaagaatcgtggactaaggtttacaacattgagacttcggtcaattctctaggctatcc |
35779907 |
T |
|
| Q |
670 |
tgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaa |
769 |
Q |
| |
|
| ||| | ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||| |||| |
|
|
| T |
35779906 |
tatttcaccgcgttatggtttatgttggccggtaaaaccctttga---------tgccatattgttatatcattcatgcaattgttttatctactttgaa |
35779816 |
T |
|
| Q |
770 |
cccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggatg |
869 |
Q |
| |
|
|| |||||| ||| | ||||||||||||||||| || ||| ||| ||| ||||||| ||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
35779815 |
cctgagaaatatggatacaaagtttttcgaattcgtgggactcgttcaaaatctgttgaagtaattccacatattccaagtctaatatcattgaaggatg |
35779716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 173 - 926
Target Start/End: Original strand, 48361389 - 48362138
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgggacagatatgttagacgaggcaatggctgggtgtttgatcatattg |
272 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| | || |||| ||| |||||| ||| | ||||| |||| |||||| | | | |
|
|
| T |
48361389 |
gctggttttggtttccaacctaaaactaatgaatataaggtgataaacatgtgggtgagacatgttaaacgtgccaatgcgtgggagtttgagcgtgtga |
48361488 |
T |
|
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgaatcttcattatcccactta |
372 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| |||| |||||| |||||||| |||||| || | || ||| | |||||||||| |
|
|
| T |
48361489 |
tccttgagataaacacacttggaacaccatcctggaggaatgttgaagtggatcctcacatttctttt---------tcgagtctcgagtatcccacttg |
48361579 |
T |
|
| Q |
373 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcct |
472 |
Q |
| |
|
||| |||||||| ||||||||||| |||||||||| | | ||||||| ||||||| ||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
48361580 |
tgtgaatggtgcacttcattggataagatttgagggtcagcaaaggtcaatattgtttttctgttttgaaagtgagagggtgcagtcatttccttctcct |
48361679 |
T |
|
| Q |
473 |
cca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattcgcatgggagaattaaggggattactttacatttgcga-tacatattct |
568 |
Q |
| |
|
||| |||||| |||||| ||||||||| ||| | ||||| || |||| ||||||||||||||| |||||| ||||||||||| || | | || |
|
|
| T |
48361680 |
ccacatgtgtttggaaatcataataatggaattcttggtaacaggcatattagcatgggagaattaaagggatttctttacatttgtgactcgacctttg |
48361779 |
T |
|
| Q |
569 |
tttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactttggtcagtcctttgggcagac |
668 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| || ||||| | ||| ||||| | |||| |
|
|
| T |
48361780 |
catc-tgatgtttcaatgtgggttatgaatgaatatggtattgaagaatcatagactaaggtttacaacatcaatactgcgttcaatccttcgagcagtt |
48361878 |
T |
|
| Q |
669 |
ctgattcgcagcgttatggtttatgttggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatga |
768 |
Q |
| |
|
|| ||| || || | |||| |||||| |||||||||||||||| || ||||||||||||||||||||||||| | | || | ||||| ||||| |
|
|
| T |
48361879 |
ttgcttcttggcattcagcttta---tggccgataaaacactttgaagaaggtgctgccatattgttatatcattcctacgaccgtttaatctattatga |
48361975 |
T |
|
| Q |
769 |
acccgagaaacatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtc-----taatctcattga |
863 |
Q |
| |
|
||| |||||| || | ||||| ||||| |||||||| | | ||| | | | ||||| |||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
48361976 |
acctgagaaatatagatgcaaagcttttcatattcacgggagtcgttcaggttcttttgaagtaatcccacatattccaagtctaatttaatttcattga |
48362075 |
T |
|
| Q |
864 |
aggatgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaatgtagct |
926 |
Q |
| |
|
||||||| |||||||||| ||||| |||||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
48362076 |
aggatgtcttgaaaggagataatatggaggtgttgaatgtccactcaaggtaagaatgtagct |
48362138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 35780541 - 35780424
Alignment:
| Q |
18 |
ttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccatt-agtaatttgcaatccagtcactggggagtttataagacttc |
116 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| | |||||| | | || ||| || ||| |||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
35780541 |
ttgtcaattcttgcaatggtttgctttgtttgtctaatccatataccgaaaaaccctttagtgatttgcaacccagtcacgggggagttcataagacttc |
35780442 |
T |
|
| Q |
117 |
ctaaagctactgcgactc |
134 |
Q |
| |
|
|| |||||||| |||||| |
|
|
| T |
35780441 |
ctgaagctactacgactc |
35780424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1076 - 1142
Target Start/End: Original strand, 48362518 - 48362584
Alignment:
| Q |
1076 |
attattccctaatattgttttaattgatataggtgtgcaaatgtcaaattgcatgaagaaaatgaag |
1142 |
Q |
| |
|
|||||||| ||||||| ||||||| ||||||||||||||| | |||||||| |||||||| |||| |
|
|
| T |
48362518 |
attattcctgaatattggtttaatttatataggtgtgcaaagtttaaattgcaggaagaaaaggaag |
48362584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 99; Significance: 3e-48; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 682 - 914
Target Start/End: Complemental strand, 5130876 - 5130640
Alignment:
| Q |
682 |
ttatggtttatgtt---ggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatct-actatgaacccgagaa |
777 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| || ||| || ||||||| ||||| |
|
|
| T |
5130876 |
ttatggtttatgtttttggccggtaaaacactttgaagagggtgctgccatattgctatatcattcctgcaactgttttgtcttaccatgaaccggagaa |
5130777 |
T |
|
| Q |
778 |
acatgctttcaaagtttttcgaattcacggcacttcttccgaatttgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaa |
877 |
Q |
| |
|
| || | |||||||||||||||||| || |||| ||| || ||||| ||||||||||| || |||||||||| ||| | |||||| |||||||| |
|
|
| T |
5130776 |
atatagatacaaagtttttcgaattcatgggacttgttcaaaaaagattgaagtaattccacatatttcaagtctaatttcactaaaggatattgtgaaa |
5130677 |
T |
|
| Q |
878 |
ggagacaatattgaggtgctgaatatccactcaaggt |
914 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5130676 |
ggagacaatattgaggtgctgaatattcactcaaggt |
5130640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 574 - 636
Target Start/End: Original strand, 26324202 - 26324264
Alignment:
| Q |
574 |
tgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaa |
636 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
26324202 |
tgatgtttcaatgtgggttatgaatgaatatggcactggagaatcatggactaagatttacaa |
26324264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 425 - 554
Target Start/End: Complemental strand, 5131093 - 5130964
Alignment:
| Q |
425 |
ttgtgtttctgtttagaaagtgagaggttgcaatcatttccttctcctcca---gtgtttcaaaatcaaaataatggatttcgtcgtaacgagcgtattc |
521 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||||| |||||||||||| |||||| |||||| |||||| ||| | | | ||||| ||| |
|
|
| T |
5131093 |
ttgtgtttcagttttgaaagtgagagattgcaatcattcccttctcctccacacgtgtttgaaaatc---ataatgatttttatggcaccgagcatatcg |
5130997 |
T |
|
| Q |
522 |
gcatgggagaattaaggggattactttacattt |
554 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| |
|
|
| T |
5130996 |
gcatgggagaattaaagggatttctttacattt |
5130964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 5131236 - 5131169
Alignment:
| Q |
273 |
tccttgagataaacacacttggaacatcatcatggagaaatgctgaagtagatcctcaaatttctatt |
340 |
Q |
| |
|
||||||||||| |||| |||||||||| ||||||||||||| |||||| |||| ||| ||||||||| |
|
|
| T |
5131236 |
tccttgagatacacactcttggaacattgtcatggagaaatgttgaagtggatcttcagatttctatt |
5131169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 72; Significance: 4e-32; HSPs: 3)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 825 - 920
Target Start/End: Complemental strand, 4583 - 4488
Alignment:
| Q |
825 |
ttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaat |
920 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
4583 |
ttgaagtaattccacatattccaagtctaatctcattgaaggatgccgtgaaaggagacaatattgaggtgttgaatatccactcaaggtaagaat |
4488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 517 - 649
Target Start/End: Complemental strand, 4878 - 4746
Alignment:
| Q |
517 |
tattcgcatgggagaattaaggggattactttacatttgcgatacatattcttttcgtgatgttgcaatgtgggttatgaatgaatatggcattggagaa |
616 |
Q |
| |
|
|||| ||||||||||||||| |||||| ||||||||||| || || | || || ||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4878 |
tattagcatgggagaattaaagggatttctttacatttgtgactcaaactccttaaaatatgttacaatgtgggttatgaatgaatatggcattggtgaa |
4779 |
T |
|
| Q |
617 |
tcatggactaaggtttacaagattgatactttg |
649 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||| |
|
|
| T |
4778 |
tcatggactaaggtttaccacattaatactttg |
4746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 363 - 477
Target Start/End: Complemental strand, 5054 - 4942
Alignment:
| Q |
363 |
atcccacttatgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatt |
462 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||||||||||||||| | |||| ||| |||||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
5054 |
atcccacttgtgtgaatggtgcacttcattggatcagatttgagggaaaggaaacgtc--tattgtgtttttgttttgacagtgagaggttgcaatcatt |
4957 |
T |
|
| Q |
463 |
tccttctcctccagt |
477 |
Q |
| |
|
||| ||||| ||||| |
|
|
| T |
4956 |
tccctctcccccagt |
4942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 66; Significance: 1e-28; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 831 - 920
Target Start/End: Complemental strand, 16716264 - 16716175
Alignment:
| Q |
831 |
taattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggagacaatattgaggtgctgaatatccactcaaggtgagaat |
920 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
16716264 |
taattccacatattccaagtctaatctcattgaaggatgccgtgaaaggagagaatattgaggtgttgaatatccactcaaggtaagaat |
16716175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 576 - 647
Target Start/End: Complemental strand, 16716518 - 16716447
Alignment:
| Q |
576 |
atgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaagattgatactt |
647 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
16716518 |
atgttacaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttaccacattgatactt |
16716447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 363 - 477
Target Start/End: Complemental strand, 16716755 - 16716641
Alignment:
| Q |
363 |
atcccacttatgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgtttagaaagtgagaggttgcaatcatt |
462 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||| ||| |||||||| |||| ||||||||||||||| ||||| |||||||||| |||||| ||||| |
|
|
| T |
16716755 |
atcccacttgtgtgaatggtgcacttcattggttcacatttgagggaagggaaatgtctatattgtgtttttgttttgaaagtgagaagttgcattcatt |
16716656 |
T |
|
| Q |
463 |
tccttctcctccagt |
477 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
16716655 |
tccttctcccccagt |
16716641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 698 - 744
Target Start/End: Complemental strand, 16716409 - 16716363
Alignment:
| Q |
698 |
ccggtaaaacactttgaagagggggctgccatattgttatatcattc |
744 |
Q |
| |
|
||||||||||||||||||||||| |||| | |||||||||||||||| |
|
|
| T |
16716409 |
ccggtaaaacactttgaagagggtgctggcgtattgttatatcattc |
16716363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 16716939 - 16716886
Alignment:
| Q |
173 |
gctggttttggcttccaacctaaaactaatgaatataaggtgatgtatatttgg |
226 |
Q |
| |
|
||||||||||| ||| | |||||||||||||||||||| ||||| |||||||| |
|
|
| T |
16716939 |
gctggttttggtttctatcctaaaactaatgaatataaagtgatacatatttgg |
16716886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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