View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8973_high_19 (Length: 324)
Name: NF8973_high_19
Description: NF8973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8973_high_19 |
 | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0035 (2 HSPs) |
| | |
|
| [»] scaffold0158 (3 HSPs) |
| | |
|
| [»] scaffold1407 (1 HSPs) |
| | |
|
| [»] scaffold0564 (1 HSPs) |
| | |
|
| [»] scaffold0177 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0001 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 185972 - 186268
Alignment:
| Q |
17 |
ctgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagtcctaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
185972 |
ctgggttgtatggctatgtttcaggtacacagcgataaaggcctccatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagtcctaa |
186071 |
T |
|
| Q |
117 |
agaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------acaccac |
203 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
186072 |
agaattcagcttcagggtgacggccgtcaaaccctgtgacgggttgaccgtcacctttcaactcgacctggctgtcaccagcaccccagaccgtcaccac |
186171 |
T |
|
| Q |
204 |
cccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctctcc |
300 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
186172 |
cccgtgacgagcagactgtcacaccctgtgacgcccgtcacgggttcgggagaatcagtctcccccacttccaggaacggtttccagttttctctcc |
186268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 98004 - 97698
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
98004 |
ttatgctgggttgtatggctatgtttcaggtacacagcaataaaggcctccatgcgcaaaaatggcgaaattcggcgagaaaacaaagaaagaaagaagt |
97905 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------ac |
198 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
97904 |
cctaaagaattcagcttcagggtgacgaccgtcacaccctgtgacgggttgaccgtcacccttcaactcgacctggctgtcaccagcaccccagaccgtc |
97805 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
97804 |
accaccccgtgacgagcagaccgtcacaccccgtgacgcccgtcacgggttcgggagaatcagtcttccccactcccaggaacggtttccagttttctct |
97705 |
T |
|
| Q |
299 |
cctactt |
305 |
Q |
| |
|
|| |||| |
|
|
| T |
97704 |
cccactt |
97698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 88286 - 87980
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
88286 |
ttatgctgggttgtatggctatgtttcaggtacacagcaataaaggcctccatgcgcaaaaatgacgaaattcagcgagaaaacaaagaaagaaagaagt |
88187 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------ac |
198 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
88186 |
cctaaagaattcagcttcagggtgacaaccgtcacaccctgtgacaggttgaccgtcacccttcaactcgacctggctgtcaccagcaccccagaccgtc |
88087 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
88086 |
accaccccgtgacaagcaaactgtcacaccctgtgacgcccgtcacgggttcgggagaatcagtcttgcccactcccaggaacggttttcagttttctct |
87987 |
T |
|
| Q |
299 |
cctactt |
305 |
Q |
| |
|
|| |||| |
|
|
| T |
87986 |
cccactt |
87980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158 (Bit Score: 188; Significance: 1e-102; HSPs: 3)
Name: scaffold0158
Description:
Target: scaffold0158; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 36836 - 36541
Alignment:
| Q |
18 |
tgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagtcctaaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
36836 |
tgggttgtatggctatgtttcaggtacacagcaataaaggcctccatgcgcaaaaatgacgaaattcggcgacaaagcgaagaaaggaagaagtcctaaa |
36737 |
T |
|
| Q |
118 |
gaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------acaccacc |
204 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36736 |
gaattcagcttcagggtgacggccgtcacaccctgtgacgggttgaccgtcacctttcaactcgacctggctgtcaccagcaccgcagaccgtcaccacc |
36637 |
T |
|
| Q |
205 |
ccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctctcc |
300 |
Q |
| |
|
||||||| | |||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
36636 |
ccgtgacgataagaccgtcgcaccctgtgacgcccgtcatgggttcgggagaatcagtctgccccacttccaggaacggtttccagttttctctcc |
36541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 31349 - 31073
Alignment:
| Q |
18 |
tgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagtcctaaa |
117 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
31349 |
tgggttgtacggctatgtttcaggtacacagcaataaaggcctccatgcgcaaaaatgacgaaattcggcgagaaagcgaagaaaggaagaagtcctaaa |
31250 |
T |
|
| Q |
118 |
gaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------acaccacc |
204 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31249 |
gaattcagcttcagggtg-------------------acgggttgaccgtcacctttcaactcgacctggctgtcaccagcaccccagaccgtcaccacc |
31169 |
T |
|
| Q |
205 |
ccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctctcc |
300 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31168 |
ccgtgacgagcagaccgtcacaccctgtgacgcccgtcacgggttcgggagaatcagtctcccccacttccaggaacggtttccagttttctctcc |
31073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 36915 - 36838
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcga |
89 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
36915 |
ttatgctgggttgtatggctatgtttcaggtacacagcaataaaggcctccatgcgcaaaaatgacgaaattcggcga |
36838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 18478159 - 18477854
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18478159 |
ttatgctggtttgtatggctgtgtttcaggtactcagcaataaaggccttcatgcgcaaaaatgacgaaattcggcaagaaaacaaagaaaggaagaagt |
18478060 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------ac |
198 |
Q |
| |
|
||||||||||| || ||| ||| |||| |||||||| | |||||||| ||||||||| ||||||| ||||||||||| || |||| | |
|
|
| T |
18478059 |
cctaaagaattcag-ttcggggggacgaccgtcacatcctgtgacggtttgaccgtctcctttcagctcgacctggccgttaccagcaccccagaccgtc |
18477961 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18477960 |
accaccccgtgtcgagcagaccgtcacaccctgtgacgcccgtcatgggttcgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
18477861 |
T |
|
| Q |
299 |
cctactt |
305 |
Q |
| |
|
|| |||| |
|
|
| T |
18477860 |
cccactt |
18477854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 18488254 - 18487950
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18488254 |
ttatgctggattgtatggctgtgtttcaggtactcagcaataaaggcctccatgcgcaaaaatgacgaaattcggcaagaaaacaaagaaaggaagaagt |
18488155 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------ac |
198 |
Q |
| |
|
||||||||||| || |||| ||||||| |||||||| | |||||||| ||||||||| ||||||| ||||||||||| || |||| | |
|
|
| T |
18488154 |
cctaaagaattcag-ttca-ggtgacgaccgtcacatcctgtgacggattgaccgtctcctttcagctcgacctggccgttaccagcaccccagaccgtc |
18488057 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||| | ||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18488056 |
accaccccgtgtcgagcagactgtcacaccctgtgacgcacgtcacgggttcggaagaatcagtctcccccactcccaggaacggtttccagttttctct |
18487957 |
T |
|
| Q |
299 |
cctactt |
305 |
Q |
| |
|
|| |||| |
|
|
| T |
18487956 |
cccactt |
18487950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 300
Target Start/End: Original strand, 14233376 - 14233677
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| | |||||||||||||| | ||||||| |
|
|
| T |
14233376 |
ttatgctgggttgtatggctatgtttcaggtacacagcaataaaggccttcatgcgcaaaaatgacggaattcagtgagaaaacaaagaaggaaagaagt |
14233475 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtc-------------accaac |
198 |
Q |
| |
|
| ||| ||||| ||||||||||||||||||||| ||| ||||||| | ||| ||||||| | |||||||||||||||||| ||| | |
|
|
| T |
14233476 |
cttaaggaattctgcttcagggtgacggccgtcataccctgtgacgtgctgatcgtcaccctccaactcgacctggctgtcatcagcatcccagaccgtc |
14233575 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||| |||||||||||| || |||| |||||||||||| | | | |||||||||||| ||||||| |
|
|
| T |
14233576 |
accaccccgtgacgagcagatcgtcacaccctgtgacgtccgtcacgggttcggaagaagcagtctcccccattatctgaaacggtttccagatttctct |
14233675 |
T |
|
| Q |
299 |
cc |
300 |
Q |
| |
|
|| |
|
|
| T |
14233676 |
cc |
14233677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 12 - 300
Target Start/End: Original strand, 14223281 - 14223582
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| | |||||||||||||| | |||||| |
|
|
| T |
14223281 |
ttatgctgggttgtatggctatgtttcaggtacatagcaataaaggccttcatgcgcaaaaatgacggaattcagtgagaaaacaaagaaggatagaagt |
14223380 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtc-------------accaac |
198 |
Q |
| |
|
| ||| ||||| ||||||||||||||||||||| ||| ||||||| | ||| ||||||| | |||||||||||||||||| ||| | |
|
|
| T |
14223381 |
cttaaggaattctgcttcagggtgacggccgtcataccctgtgacgtgctgatcgtcaccctccaactcgacctggctgtcatcagcatcccagaccgtc |
14223480 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||| |||||||||||| || |||| |||||||||||| | | | |||||||||||| ||||||| |
|
|
| T |
14223481 |
accaccccgtgacgagcagatcgtcacaccctgtgacgtccgtcacgggttcggaagaagcagtctcccccattatctgaaacggtttccagatttctct |
14223580 |
T |
|
| Q |
299 |
cc |
300 |
Q |
| |
|
|| |
|
|
| T |
14223581 |
cc |
14223582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 300
Target Start/End: Original strand, 28385837 - 28386138
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| | |||||||||||||| | ||||||| |
|
|
| T |
28385837 |
ttatgctgggttgtatggctatgtttcaggtacacagcaataaaggccttcatgcgcaaaaatgacggaattcagtgagaaaacaaagaaggaaagaagt |
28385936 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcacca-------------ac |
198 |
Q |
| |
|
| || ||||| ||||||||||||||| ||||| ||| ||||||| | ||| ||||||| | |||||||||||||||||||||| | |
|
|
| T |
28385937 |
cttagggaattctgcttcagggtgacggtcgtcataccctgtgacgtgctgatcgtcaccctccaactcgacctggctgtcaccagcatcccagaccgtc |
28386036 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||||||||||||| || |||| |||||||||||| | | | |||||||||||| ||||||| |
|
|
| T |
28386037 |
accaccccgtgacgagcagatcgtcacaccctgtgacgcccgtcacgggttcggaagaagcagtctcccccattatctgaaacggtttccagatttctct |
28386136 |
T |
|
| Q |
299 |
cc |
300 |
Q |
| |
|
|| |
|
|
| T |
28386137 |
cc |
28386138 |
T |
|
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Target: scaffold1407 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold1407
Description:
Target: scaffold1407; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 300
Target Start/End: Complemental strand, 1727 - 1440
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||| | ||||||||||||| | ||||||| |
|
|
| T |
1727 |
ttatgctgggttgtatgactatgtttcaggtacacagcaataaaggccttcatgcgtaaaaatgacggaattcagtaagaaaacaaagaaggaaagaagt |
1628 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtcaccaacaccaccccgtgac |
211 |
Q |
| |
|
| | | ||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||| | ||||||||||| || ||| |||||||||||||| |
|
|
| T |
1627 |
cttgaggaattctgcttcagggtgacggccgtcataccctgtgacgtgttgatcgtcaccctccaactcgacct-gcccagaccgtcaccaccccgtgac |
1529 |
T |
|
| Q |
212 |
aagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctctcc |
300 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||| || |||| |||||||||||| | | | ||||||| |||||||||||||| |
|
|
| T |
1528 |
gagcagatcgtcacaccctgtgacgtccgtcacgggttcggaagaagcagtctcccccattatctgaaacggttcccagttttctctcc |
1440 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0564 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0564
Description:
Target: scaffold0564; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 12 - 300
Target Start/End: Complemental strand, 900 - 599
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||| | |||||||||||||| | ||||||| |
|
|
| T |
900 |
ttatgctgggttgtatggctatgtttcaggtacacagcaataaaggccttcatgctcaaaaatgacggaattcagtgagaaaacaaagaaggaaagaagt |
801 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaactcgacctggctgtc-------------accaac |
198 |
Q |
| |
|
| ||| ||||| ||||||||||||||||||||| ||| ||||||| | ||| ||||||| | |||||||||||||||||| ||| | |
|
|
| T |
800 |
cttaaggaattctgcttcagggtgacggccgtcataccctgtgacgtgctgatcgtcaccctccaactcgacctggctgtcatcagcatcccagaccgtc |
701 |
T |
|
| Q |
199 |
accaccccgtgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctct |
298 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||| |||||||||||| || |||| |||||||||||| | | | ||||||||||| ||||||| |
|
|
| T |
700 |
accaccccgtgacgagcagatcgtcacaccctgtgacgtccgtcacgggttcggaagaagcagtctcccccattatctgaaacggtttccatatttctct |
601 |
T |
|
| Q |
299 |
cc |
300 |
Q |
| |
|
|| |
|
|
| T |
600 |
cc |
599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0177 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0177
Description:
Target: scaffold0177; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 12 - 300
Target Start/End: Original strand, 32117 - 32405
Alignment:
| Q |
12 |
ttatactgggttgtatggctatgtttcaggtacacggcaataaaggcctctatgcgcaaaaatgacgaaattcggcgagaaaacaaagaaaggaagaagt |
111 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| | ||||||||||||| | ||||||| |
|
|
| T |
32117 |
ttatgctgggttgtatgtctatgtttcaggtacacagcaataaaggccttcatgcgcaaaaatgacggaattcagtaagaaaacaaagaaggaaagaagt |
32216 |
T |
|
| Q |
112 |
cctaaagaatttagcttcagggtgacggccgtcacaccatgtgacgggttgaccgtcacctttcaa--ctcgacctggctgtca--ccaacaccaccccg |
207 |
Q |
| |
|
| | | ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||| ||||||||| | || || ||||| |||| |
|
|
| T |
32217 |
cttgaggaattctgcttcagggtgacggccgtcacaccctgtgacgtgttgatcgtcaccctccaactctcgacctgcc---caagccgtcacca-cccg |
32312 |
T |
|
| Q |
208 |
tgacaagcagaccgtcacaccctgtgacgcccgtcacgggtttgggagaatcagtctcccccactcccaggaacggtttccagttttctctcc |
300 |
Q |
| |
|
|||| |||||| ||||||||||||||||| |||||||||||| || |||| |||||||||||| | | | ||| |||||| ||||||||||| |
|
|
| T |
32313 |
tgacgagcagatcgtcacaccctgtgacgtccgtcacgggttcggaagaagcagtctcccccattatctgaaactgtttccggttttctctcc |
32405 |
T |
|
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