View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8973_low_65 (Length: 242)

Name: NF8973_low_65
Description: NF8973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8973_low_65
NF8973_low_65
[»] chr1 (34 HSPs)
chr1 (4-100)||(21862658-21862764)
chr1 (4-100)||(50618683-50618789)
chr1 (4-100)||(33389314-33389420)
chr1 (4-100)||(21832270-21832376)
chr1 (4-100)||(21838918-21839024)
chr1 (161-235)||(50618548-50618622)
chr1 (4-100)||(51331778-51331884)
chr1 (2-100)||(20140049-20140157)
chr1 (160-235)||(16378229-16378304)
chr1 (8-100)||(430401-430503)
chr1 (4-100)||(16348881-16348987)
chr1 (4-100)||(21026141-21026247)
chr1 (4-100)||(21234016-21234122)
chr1 (4-100)||(24792901-24793007)
chr1 (4-56)||(41352000-41352053)
chr1 (160-224)||(21862534-21862598)
chr1 (163-235)||(38910976-38911048)
chr1 (160-235)||(37679214-37679289)
chr1 (4-100)||(17043300-17043406)
chr1 (163-221)||(19661300-19661358)
chr1 (163-221)||(21743716-21743774)
chr1 (8-100)||(21750912-21751014)
chr1 (4-100)||(22503574-22503680)
chr1 (163-235)||(21953046-21953118)
chr1 (163-235)||(31538147-31538219)
chr1 (163-235)||(48425041-48425113)
chr1 (163-235)||(52987909-52987981)
chr1 (160-235)||(22360394-22360469)
chr1 (4-45)||(16378110-16378151)
chr1 (4-56)||(19108336-19108389)
chr1 (164-224)||(430277-430337)
chr1 (163-235)||(20296549-20296621)
chr1 (5-41)||(22360598-22360634)
chr1 (163-231)||(24097757-24097825)
[»] scaffold0022 (6 HSPs)
scaffold0022 (4-100)||(40616-40722)
scaffold0022 (4-100)||(55739-55845)
scaffold0022 (4-100)||(74336-74442)
scaffold0022 (160-235)||(40782-40857)
scaffold0022 (160-235)||(74502-74577)
scaffold0022 (161-235)||(55906-55980)
[»] scaffold1602 (2 HSPs)
scaffold1602 (5-100)||(283-388)
scaffold1602 (160-235)||(148-223)
[»] scaffold0575 (2 HSPs)
scaffold0575 (4-100)||(3565-3671)
scaffold0575 (160-221)||(3731-3792)
[»] scaffold0023 (3 HSPs)
scaffold0023 (4-100)||(2721-2827)
scaffold0023 (4-100)||(151094-151200)
scaffold0023 (160-235)||(2586-2661)
[»] chr7 (38 HSPs)
chr7 (4-100)||(8709547-8709653)
chr7 (4-100)||(11235435-11235541)
chr7 (161-235)||(14041804-14041878)
chr7 (161-235)||(14351834-14351908)
chr7 (4-100)||(15159279-15159385)
chr7 (160-235)||(15146971-15147046)
chr7 (4-100)||(14041637-14041743)
chr7 (4-100)||(14351667-14351773)
chr7 (4-100)||(44789573-44789679)
chr7 (4-100)||(14334338-14334444)
chr7 (4-100)||(15147107-15147213)
chr7 (162-235)||(12204865-12204938)
chr7 (4-100)||(10872632-10872738)
chr7 (4-100)||(11770463-11770569)
chr7 (5-100)||(15572-15677)
chr7 (4-45)||(8200570-8200611)
chr7 (56-100)||(18588393-18588437)
chr7 (162-221)||(14262324-14262383)
chr7 (162-221)||(19149322-19149381)
chr7 (4-100)||(12689444-12689550)
chr7 (54-100)||(13688043-13688089)
chr7 (4-100)||(14956496-14956602)
chr7 (163-221)||(15100682-15100740)
chr7 (163-221)||(20748722-20748780)
chr7 (4-56)||(11551377-11551430)
chr7 (4-56)||(14213616-14213669)
chr7 (163-216)||(15626636-15626689)
chr7 (162-215)||(48813359-48813412)
chr7 (163-235)||(11301278-11301350)
chr7 (163-235)||(13675564-13675636)
chr7 (163-235)||(13966733-13966805)
chr7 (163-235)||(16948537-16948609)
chr7 (163-235)||(19614787-19614859)
chr7 (163-235)||(26092863-26092935)
chr7 (160-235)||(26116655-26116730)
chr7 (169-218)||(11386511-11386560)
chr7 (163-235)||(15342543-15342615)
chr7 (163-235)||(49154413-49154485)
[»] chr6 (39 HSPs)
chr6 (4-100)||(24294140-24294246)
chr6 (4-100)||(23080286-23080392)
chr6 (4-100)||(27564191-27564297)
chr6 (160-235)||(18406167-18406242)
chr6 (4-100)||(2873161-2873267)
chr6 (4-100)||(25608219-25608325)
chr6 (160-235)||(22760678-22760753)
chr6 (160-235)||(23080452-23080527)
chr6 (160-215)||(23086014-23086069)
chr6 (4-100)||(16925996-16926102)
chr6 (161-215)||(18963331-18963385)
chr6 (4-100)||(25114369-25114475)
chr6 (162-235)||(18183590-18183663)
chr6 (4-56)||(20634351-20634404)
chr6 (4-56)||(22760866-22760919)
chr6 (54-98)||(5837579-5837623)
chr6 (160-235)||(20634163-20634238)
chr6 (4-100)||(16961840-16961946)
chr6 (4-100)||(22828713-22828819)
chr6 (4-100)||(28261555-28261661)
chr6 (4-100)||(28284255-28284361)
chr6 (4-100)||(28340304-28340410)
chr6 (162-215)||(19487525-19487578)
chr6 (4-56)||(22435686-22435739)
chr6 (4-56)||(22444084-22444137)
chr6 (4-56)||(27189253-27189306)
chr6 (4-56)||(27259934-27259987)
chr6 (4-100)||(18406302-18406408)
chr6 (163-235)||(24366398-24366470)
chr6 (160-224)||(25763462-25763526)
chr6 (163-235)||(25769830-25769902)
chr6 (162-221)||(19881283-19881342)
chr6 (4-39)||(25763657-25763692)
chr6 (4-100)||(19866504-19866610)
chr6 (162-235)||(25608084-25608157)
chr6 (163-235)||(14378139-14378211)
chr6 (163-235)||(14379689-14379761)
chr6 (163-235)||(19436988-19437060)
chr6 (54-86)||(23086143-23086175)
[»] chr5 (35 HSPs)
chr5 (4-100)||(22331282-22331388)
chr5 (4-100)||(14998134-14998240)
chr5 (4-100)||(16358387-16358493)
chr5 (4-100)||(19771845-19771951)
chr5 (4-100)||(34568379-34568485)
chr5 (4-100)||(37289891-37289997)
chr5 (4-100)||(40710665-40710771)
chr5 (161-221)||(26737001-26737061)
chr5 (160-235)||(23473278-23473353)
chr5 (4-100)||(20801282-20801388)
chr5 (4-100)||(22136553-22136659)
chr5 (4-100)||(27520291-27520397)
chr5 (4-100)||(27612239-27612345)
chr5 (8-100)||(27683795-27683897)
chr5 (4-100)||(29474468-29474574)
chr5 (4-100)||(21337689-21337795)
chr5 (160-221)||(21337568-21337629)
chr5 (5-100)||(27666885-27666990)
chr5 (4-100)||(22349804-22349910)
chr5 (4-100)||(41772727-41772833)
chr5 (4-56)||(25428318-25428371)
chr5 (163-235)||(14885251-14885323)
chr5 (163-235)||(24796657-24796729)
chr5 (160-215)||(20466379-20466434)
chr5 (4-39)||(26737193-26737228)
chr5 (160-235)||(37541641-37541716)
chr5 (62-100)||(18781067-18781105)
chr5 (163-221)||(21679052-21679110)
chr5 (163-221)||(22234194-22234252)
chr5 (162-235)||(21562284-21562357)
chr5 (163-235)||(20344318-20344390)
chr5 (163-235)||(22504715-22504787)
chr5 (64-100)||(25428388-25428424)
chr5 (160-212)||(25428484-25428536)
chr5 (163-235)||(25850111-25850183)
[»] chr4 (34 HSPs)
chr4 (4-100)||(23957700-23957806)
chr4 (4-100)||(14301932-14302038)
chr4 (4-100)||(27713289-27713395)
chr4 (160-235)||(14849184-14849259)
chr4 (4-100)||(8051576-8051682)
chr4 (4-100)||(18225399-18225505)
chr4 (4-100)||(40474993-40475099)
chr4 (5-100)||(8388366-8388471)
chr4 (162-235)||(15072480-15072553)
chr4 (2-100)||(18613777-18613885)
chr4 (163-215)||(14696235-14696287)
chr4 (160-235)||(16218349-16218424)
chr4 (160-235)||(16221669-16221744)
chr4 (4-100)||(12478553-12478659)
chr4 (4-100)||(14682520-14682626)
chr4 (4-42)||(15145906-15145944)
chr4 (8-100)||(16353460-16353562)
chr4 (4-100)||(19776746-19776852)
chr4 (4-56)||(1640346-1640399)
chr4 (162-235)||(1647355-1647428)
chr4 (160-221)||(15145717-15145778)
chr4 (163-235)||(3262872-3262944)
chr4 (163-235)||(11205310-11205382)
chr4 (163-235)||(16149833-16149905)
chr4 (163-235)||(16153979-16154051)
chr4 (4-40)||(29037427-29037463)
chr4 (163-235)||(29451615-29451687)
chr4 (160-235)||(44659944-44660019)
chr4 (163-221)||(15001457-15001515)
chr4 (54-100)||(16234945-16234991)
chr4 (62-100)||(17093102-17093140)
chr4 (54-86)||(14696126-14696158)
chr4 (64-100)||(15145838-15145874)
chr4 (163-235)||(15258050-15258122)
[»] chr3 (44 HSPs)
chr3 (4-100)||(13254262-13254368)
chr3 (4-100)||(15346697-15346803)
chr3 (4-100)||(5109063-5109169)
chr3 (4-100)||(10007172-10007278)
chr3 (4-100)||(16637345-16637451)
chr3 (4-100)||(48427019-48427125)
chr3 (160-235)||(15261368-15261443)
chr3 (4-100)||(3687515-3687621)
chr3 (4-100)||(10907782-10907888)
chr3 (4-100)||(14874951-14875057)
chr3 (4-100)||(15723386-15723492)
chr3 (4-98)||(15261202-15261306)
chr3 (4-100)||(12499820-12499926)
chr3 (4-100)||(15587844-15587950)
chr3 (4-100)||(16693736-16693842)
chr3 (4-100)||(16805399-16805505)
chr3 (4-100)||(17491422-17491528)
chr3 (162-235)||(15229353-15229426)
chr3 (162-235)||(15235221-15235294)
chr3 (5-56)||(6602309-6602361)
chr3 (5-56)||(53383523-53383575)
chr3 (163-221)||(12269961-12270019)
chr3 (4-100)||(15340841-15340947)
chr3 (4-100)||(15400969-15401075)
chr3 (4-100)||(20060506-20060612)
chr3 (4-56)||(12888281-12888334)
chr3 (5-56)||(5423435-5423487)
chr3 (163-235)||(13970426-13970498)
chr3 (163-235)||(14088424-14088496)
chr3 (163-235)||(16327966-16328038)
chr3 (163-235)||(31693491-31693563)
chr3 (163-235)||(47125695-47125767)
chr3 (163-218)||(31940654-31940709)
chr3 (54-88)||(11889744-11889778)
chr3 (163-221)||(12180089-12180147)
chr3 (163-221)||(16826601-16826659)
chr3 (160-226)||(41179270-41179336)
chr3 (162-235)||(11959475-11959548)
chr3 (160-221)||(12499986-12500047)
chr3 (55-100)||(16755153-16755198)
chr3 (160-221)||(16805278-16805339)
chr3 (163-235)||(12358833-12358905)
chr3 (187-235)||(14579725-14579773)
chr3 (163-215)||(28756069-28756121)
[»] chr2 (31 HSPs)
chr2 (4-100)||(24711618-24711724)
chr2 (4-100)||(27372853-27372959)
chr2 (4-100)||(41607138-41607244)
chr2 (4-100)||(9485800-9485906)
chr2 (4-100)||(16926944-16927050)
chr2 (4-100)||(17000584-17000690)
chr2 (4-100)||(22323609-22323715)
chr2 (4-100)||(27219600-27219706)
chr2 (4-100)||(24263954-24264060)
chr2 (4-100)||(24677073-24677179)
chr2 (4-100)||(44384323-44384429)
chr2 (4-56)||(23073447-23073500)
chr2 (160-215)||(24818868-24818923)
chr2 (4-100)||(10870434-10870540)
chr2 (4-100)||(24706235-24706341)
chr2 (5-100)||(23189504-23189608)
chr2 (163-235)||(31832411-31832483)
chr2 (160-235)||(1065501-1065576)
chr2 (4-100)||(21143794-21143900)
chr2 (4-100)||(21324019-21324125)
chr2 (4-100)||(22734527-22734633)
chr2 (4-100)||(24875503-24875609)
chr2 (163-235)||(23278529-23278601)
chr2 (163-235)||(25255672-25255744)
chr2 (62-100)||(9337234-9337272)
chr2 (163-212)||(23073616-23073665)
chr2 (162-235)||(23098636-23098709)
chr2 (63-100)||(23106481-23106518)
chr2 (162-235)||(23112488-23112561)
chr2 (160-212)||(23106369-23106421)
chr2 (160-212)||(24677239-24677291)
[»] scaffold0138 (2 HSPs)
scaffold0138 (5-100)||(7303-7408)
scaffold0138 (160-235)||(7168-7243)
[»] chr8 (47 HSPs)
chr8 (4-98)||(22988749-22988853)
chr8 (160-235)||(22246954-22247029)
chr8 (160-235)||(22422413-22422488)
chr8 (4-100)||(17672679-17672785)
chr8 (4-100)||(18858596-18858702)
chr8 (4-100)||(19114709-19114815)
chr8 (161-235)||(23887214-23887288)
chr8 (5-100)||(22131697-22131802)
chr8 (160-221)||(22375988-22376049)
chr8 (160-224)||(22522731-22522795)
chr8 (4-100)||(15535402-15535508)
chr8 (4-100)||(20016919-20017025)
chr8 (4-100)||(22041846-22041952)
chr8 (4-100)||(22118831-22118937)
chr8 (4-100)||(22127615-22127721)
chr8 (4-100)||(23652060-23652166)
chr8 (4-100)||(30311800-30311906)
chr8 (160-235)||(23652226-23652301)
chr8 (4-100)||(21165194-21165300)
chr8 (54-100)||(22376109-22376155)
chr8 (4-56)||(19482773-19482826)
chr8 (4-56)||(21783129-21783182)
chr8 (163-224)||(29301958-29302019)
chr8 (163-235)||(20008442-20008514)
chr8 (163-235)||(27356724-27356796)
chr8 (4-100)||(21252963-21253069)
chr8 (4-56)||(19864803-19864856)
chr8 (160-221)||(21165073-21165134)
chr8 (4-56)||(21392570-21392623)
chr8 (4-56)||(21787064-21787117)
chr8 (162-235)||(21920269-21920342)
chr8 (4-56)||(22422601-22422654)
chr8 (163-235)||(6605846-6605918)
chr8 (163-235)||(21323800-21323872)
chr8 (163-235)||(23657115-23657187)
chr8 (163-235)||(28983099-28983171)
chr8 (163-235)||(28988318-28988390)
chr8 (4-100)||(32602163-32602270)
chr8 (4-100)||(19979986-19980092)
chr8 (163-221)||(21927616-21927674)
chr8 (4-56)||(21920457-21920510)
chr8 (162-219)||(22373118-22373175)
chr8 (163-235)||(14567330-14567402)
chr8 (163-235)||(16269745-16269817)
chr8 (163-235)||(19861623-19861695)
chr8 (160-212)||(21253129-21253181)
chr8 (4-55)||(22247143-22247195)
[»] scaffold0333 (2 HSPs)
scaffold0333 (160-235)||(17799-17874)
scaffold0333 (4-56)||(17638-17691)
[»] scaffold0282 (2 HSPs)
scaffold0282 (160-235)||(14560-14635)
scaffold0282 (54-100)||(14695-14741)
[»] scaffold0011 (2 HSPs)
scaffold0011 (160-235)||(24614-24689)
scaffold0011 (4-100)||(24749-24855)
[»] scaffold2004 (2 HSPs)
scaffold2004 (4-100)||(1025-1131)
scaffold2004 (160-221)||(904-965)
[»] scaffold0454 (1 HSPs)
scaffold0454 (4-100)||(8922-9028)
[»] scaffold0012 (1 HSPs)
scaffold0012 (161-235)||(217501-217575)
[»] scaffold0006 (2 HSPs)
scaffold0006 (4-100)||(103217-103323)
scaffold0006 (160-224)||(103383-103447)
[»] scaffold0243 (2 HSPs)
scaffold0243 (160-221)||(25040-25101)
scaffold0243 (4-100)||(25161-25267)
[»] scaffold0476 (1 HSPs)
scaffold0476 (160-224)||(10316-10380)
[»] scaffold0228 (2 HSPs)
scaffold0228 (161-235)||(20389-20463)
scaffold0228 (4-100)||(20222-20328)
[»] scaffold0083 (1 HSPs)
scaffold0083 (160-215)||(9135-9190)
[»] scaffold0001 (1 HSPs)
scaffold0001 (160-235)||(495168-495243)
[»] scaffold0109 (2 HSPs)
scaffold0109 (4-100)||(40137-40243)
scaffold0109 (5-56)||(14394-14446)
[»] scaffold0056 (1 HSPs)
scaffold0056 (4-100)||(3569-3675)
[»] scaffold0042 (2 HSPs)
scaffold0042 (4-100)||(38036-38142)
scaffold0042 (160-235)||(22855-22930)
[»] scaffold0010 (3 HSPs)
scaffold0010 (4-100)||(3898-4004)
scaffold0010 (160-221)||(4064-4125)
scaffold0010 (163-235)||(40414-40486)
[»] scaffold0621 (2 HSPs)
scaffold0621 (4-56)||(3416-3469)
scaffold0621 (160-235)||(3582-3657)
[»] scaffold0122 (1 HSPs)
scaffold0122 (4-56)||(38217-38270)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-100)||(55207-55316)
[»] scaffold0908 (2 HSPs)
scaffold0908 (160-235)||(860-935)
scaffold0908 (6-56)||(1045-1096)
[»] scaffold0379 (1 HSPs)
scaffold0379 (160-216)||(5989-6045)
[»] scaffold0120 (2 HSPs)
scaffold0120 (160-224)||(8170-8234)
scaffold0120 (4-56)||(8004-8057)
[»] scaffold0106 (1 HSPs)
scaffold0106 (163-235)||(33487-33559)
[»] scaffold0084 (2 HSPs)
scaffold0084 (160-235)||(7371-7446)
scaffold0084 (8-100)||(7209-7311)
[»] scaffold0270 (2 HSPs)
scaffold0270 (160-235)||(6021-6096)
scaffold0270 (160-235)||(13151-13226)
[»] scaffold0018 (3 HSPs)
scaffold0018 (160-215)||(10842-10897)
scaffold0018 (160-215)||(17034-17089)
scaffold0018 (160-215)||(24399-24454)
[»] scaffold0739 (1 HSPs)
scaffold0739 (4-100)||(1036-1142)
[»] scaffold0312 (2 HSPs)
scaffold0312 (8-100)||(47-149)
scaffold0312 (164-224)||(213-273)
[»] scaffold0297 (1 HSPs)
scaffold0297 (4-100)||(7909-8015)
[»] scaffold0108 (1 HSPs)
scaffold0108 (163-221)||(49257-49315)
[»] scaffold0080 (5 HSPs)
scaffold0080 (4-100)||(30866-30972)
scaffold0080 (4-100)||(36332-36438)
scaffold0080 (5-100)||(11455-11560)
scaffold0080 (4-56)||(50074-50127)
scaffold0080 (63-100)||(53688-53725)
[»] scaffold0079 (2 HSPs)
scaffold0079 (4-100)||(35480-35586)
scaffold0079 (163-240)||(2869-2946)
[»] scaffold0074 (2 HSPs)
scaffold0074 (54-100)||(5156-5202)
scaffold0074 (163-235)||(11274-11346)
[»] scaffold0040 (3 HSPs)
scaffold0040 (54-100)||(16921-16967)
scaffold0040 (160-209)||(17027-17076)
scaffold0040 (4-39)||(111775-111810)
[»] scaffold0017 (4 HSPs)
scaffold0017 (4-100)||(57999-58105)
scaffold0017 (4-56)||(18335-18388)
scaffold0017 (4-56)||(195756-195809)
scaffold0017 (160-221)||(195582-195643)
[»] scaffold0008 (3 HSPs)
scaffold0008 (4-42)||(86080-86118)
scaffold0008 (4-99)||(85447-85552)
scaffold0008 (160-212)||(85334-85386)
[»] scaffold2111 (1 HSPs)
scaffold2111 (162-235)||(668-741)
[»] scaffold1423 (1 HSPs)
scaffold1423 (4-56)||(1651-1704)
[»] scaffold0585 (1 HSPs)
scaffold0585 (162-235)||(5170-5243)
[»] scaffold0501 (1 HSPs)
scaffold0501 (4-56)||(4178-4231)
[»] scaffold0261 (2 HSPs)
scaffold0261 (163-240)||(13412-13489)
scaffold0261 (163-240)||(21591-21668)
[»] scaffold0026 (2 HSPs)
scaffold0026 (4-56)||(30929-30982)
scaffold0026 (162-221)||(50962-51021)
[»] scaffold1288 (1 HSPs)
scaffold1288 (163-235)||(935-1007)
[»] scaffold0404 (1 HSPs)
scaffold0404 (163-235)||(6903-6975)
[»] scaffold0319 (2 HSPs)
scaffold0319 (160-224)||(916-980)
scaffold0319 (4-56)||(750-803)
[»] scaffold0309 (3 HSPs)
scaffold0309 (160-212)||(16791-16843)
scaffold0309 (163-221)||(11946-12004)
scaffold0309 (4-100)||(16625-16731)
[»] scaffold0192 (1 HSPs)
scaffold0192 (163-235)||(28678-28750)
[»] scaffold0130 (2 HSPs)
scaffold0130 (163-235)||(8889-8961)
scaffold0130 (4-100)||(44859-44965)
[»] scaffold0647 (3 HSPs)
scaffold0647 (160-235)||(7740-7815)
scaffold0647 (4-56)||(7928-7981)
scaffold0647 (160-215)||(3049-3104)
[»] scaffold0509 (1 HSPs)
scaffold0509 (162-221)||(10980-11039)
[»] scaffold0293 (1 HSPs)
scaffold0293 (160-235)||(14618-14693)
[»] scaffold0020 (1 HSPs)
scaffold0020 (160-235)||(99643-99718)
[»] scaffold0540 (1 HSPs)
scaffold0540 (4-100)||(6547-6653)
[»] scaffold0431 (1 HSPs)
scaffold0431 (4-100)||(9350-9456)
[»] scaffold0342 (2 HSPs)
scaffold0342 (54-100)||(15437-15483)
scaffold0342 (160-221)||(15316-15377)
[»] scaffold0266 (1 HSPs)
scaffold0266 (163-221)||(16265-16323)
[»] scaffold0215 (2 HSPs)
scaffold0215 (4-100)||(28787-28893)
scaffold0215 (17-100)||(28679-28772)
[»] scaffold0104 (2 HSPs)
scaffold0104 (163-221)||(44512-44570)
scaffold0104 (163-235)||(24367-24439)
[»] scaffold0102 (2 HSPs)
scaffold0102 (163-221)||(41849-41907)
scaffold0102 (4-100)||(51561-51667)
[»] scaffold0044 (2 HSPs)
scaffold0044 (4-100)||(16142-16248)
scaffold0044 (4-100)||(2404-2511)
[»] scaffold0028 (2 HSPs)
scaffold0028 (4-100)||(45135-45241)
scaffold0028 (163-235)||(48595-48667)
[»] scaffold0894 (1 HSPs)
scaffold0894 (8-56)||(3914-3963)
[»] scaffold0751 (1 HSPs)
scaffold0751 (163-220)||(4329-4386)
[»] scaffold0730 (1 HSPs)
scaffold0730 (162-235)||(82-155)
[»] scaffold0676 (1 HSPs)
scaffold0676 (4-56)||(7998-8051)
[»] scaffold0358 (2 HSPs)
scaffold0358 (4-56)||(8033-8086)
scaffold0358 (4-56)||(17229-17282)
[»] scaffold0029 (2 HSPs)
scaffold0029 (4-56)||(108080-108133)
scaffold0029 (162-235)||(114711-114784)
[»] scaffold0298 (1 HSPs)
scaffold0298 (163-235)||(10138-10210)
[»] scaffold0244 (1 HSPs)
scaffold0244 (169-221)||(19511-19563)
[»] scaffold0077 (1 HSPs)
scaffold0077 (163-235)||(19715-19787)
[»] scaffold0076 (1 HSPs)
scaffold0076 (163-235)||(31758-31830)
[»] scaffold0067 (1 HSPs)
scaffold0067 (163-235)||(28775-28847)
[»] scaffold0034 (1 HSPs)
scaffold0034 (163-235)||(3034-3106)
[»] scaffold0445 (1 HSPs)
scaffold0445 (160-215)||(1950-2005)
[»] scaffold0331 (1 HSPs)
scaffold0331 (160-215)||(16079-16134)
[»] scaffold0285 (1 HSPs)
scaffold0285 (10-56)||(9215-9262)
[»] scaffold0081 (3 HSPs)
scaffold0081 (161-224)||(36177-36240)
scaffold0081 (4-42)||(20586-20624)
scaffold0081 (4-42)||(36010-36048)
[»] scaffold1985 (2 HSPs)
scaffold1985 (62-100)||(556-594)
scaffold1985 (160-221)||(435-496)
[»] scaffold0405 (1 HSPs)
scaffold0405 (163-221)||(653-711)
[»] scaffold0256 (1 HSPs)
scaffold0256 (4-100)||(23290-23396)
[»] scaffold0124 (1 HSPs)
scaffold0124 (163-221)||(14353-14411)
[»] scaffold0089 (1 HSPs)
scaffold0089 (161-235)||(14794-14868)
[»] scaffold0055 (1 HSPs)
scaffold0055 (62-100)||(21297-21335)
[»] scaffold0053 (1 HSPs)
scaffold0053 (163-221)||(47129-47187)
[»] scaffold0049 (1 HSPs)
scaffold0049 (163-221)||(49970-50028)
[»] scaffold0037 (1 HSPs)
scaffold0037 (54-100)||(115197-115243)
[»] scaffold0035 (1 HSPs)
scaffold0035 (163-221)||(4902-4960)
[»] scaffold0324 (1 HSPs)
scaffold0324 (8-56)||(13480-13529)
[»] scaffold0114 (2 HSPs)
scaffold0114 (4-45)||(18622-18663)
scaffold0114 (163-224)||(22027-22088)
[»] scaffold1373 (1 HSPs)
scaffold1373 (163-235)||(915-987)
[»] scaffold0697 (1 HSPs)
scaffold0697 (8-40)||(6939-6971)
[»] scaffold0403 (1 HSPs)
scaffold0403 (160-212)||(8522-8574)
[»] scaffold0348 (1 HSPs)
scaffold0348 (163-215)||(9975-10027)
[»] scaffold0005 (1 HSPs)
scaffold0005 (163-235)||(262377-262449)
[»] scaffold0004 (1 HSPs)
scaffold0004 (163-235)||(324857-324929)


Alignment Details
Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21862764 - 21862658
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||  ||||||||||||||||||||||||||||||||    
T  21862764 tttcaaccagaattcacacttagataatttagcataaagcttcttctctttgaacacttgcaaaaccatcttcaaatgctcagcatgttcttcctcagtc 21862665  T
Q  94 ttggagt 100  Q
    |||||||    
T  21862664 ttggagt 21862658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 50618789 - 50618683
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||||||         ||||||||||||||||||| |||||||||||||||||    
T  50618789 tttcaaccagaattcacactttgataatttagcataaagtttcttctctttcaacacttgcaaaacagtcttcaaatgctcaacatgttcttcctcagtc 50618690  T
Q  94 ttggagt 100  Q
    |||||||    
T  50618689 ttggagt 50618683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 33389420 - 33389314
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  33389420 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 33389321  T
Q  94 ttggagt 100  Q
    |||||||    
T  33389320 ttggagt 33389314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 21832270 - 21832376
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  21832270 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 21832369  T
Q  94 ttggagt 100  Q
    |||||||    
T  21832370 ttggagt 21832376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 21838918 - 21839024
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  21838918 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 21839017  T
Q  94 ttggagt 100  Q
    |||||||    
T  21839018 ttggagt 21839024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 50618622 - 50618548
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||  | || ||||||||||| |||||||||||||| |||||||| | ||||||||    
T  50618622 gattcatgtactccataaacactccaggggcatttgtaacaccgaaaggcatcactttatactcataatgtccat 50618548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 51331884 - 51331778
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||         ||||||| |||||| |||||| ||||||||||| ||||||    
T  51331884 tttcaaccagaattcacacttagacaatttagcataaaacttcttctctttcaacacttgcaaaacaatcttcagatgctccgcatgttcttcttcagtc 51331785  T
Q  94 ttggagt 100  Q
    |||||||    
T  51331784 ttggagt 51331778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 20140049 - 20140157
Alignment:
Q  2 tttttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcag 91  Q
    |||||||||||||||||||||||||| ||||||||||| ||   |||||||       ||| ||||||| ||||||| || |||||||||||||| ||||    
T  20140049 tttttcaaccagaattcacacttagacaatttagcatagagcttcttttctttcaacacttgcaaaacaatcttcaagtgatcagcatgttcttcttcag 20140148  T
Q  92 tcttggagt 100  Q
    |||||||||    
T  20140149 tcttggagt 20140157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 16378229 - 16378304
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| |||||| | || ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  16378229 cgattcatgtactccatgaacacaccaggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 16378304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 430503 - 430401
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtcttgg 97  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |||||    
T  430503 aaccagaattcacacttagataatttcgcataaagcttcttctctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcttcagacttgg 430404  T
Q  98 agt 100  Q
    |||    
T  430403 agt 430401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 16348987 - 16348881
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||||| ||||||||||| ||||||    
T  16348987 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctctgcatgttcttcttcagtc 16348888  T
Q  94 ttggagt 100  Q
    |||||||    
T  16348887 ttggagt 16348881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 21026141 - 21026247
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  21026141 tttcaaccagaactcacacttagatattttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 21026240  T
Q  94 ttggagt 100  Q
    |||||||    
T  21026241 ttggagt 21026247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21234122 - 21234016
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| ||| |||||||||||||| ||||||    
T  21234122 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgttcagcatgttcttcttcagtc 21234023  T
Q  94 ttggagt 100  Q
    |||||||    
T  21234022 ttggagt 21234016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24793007 - 24792901
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||       ||| ||| ||| |||||| ||||||| |||||||||| ||||||    
T  24793007 tttcaaccagaactcacacttagataatttagcataaagtttcttttctttcaacacttgcaagacaatcttcagatgctcaacatgttcttcttcagtc 24792908  T
Q  94 ttggagt 100  Q
    |||||||    
T  24792907 ttggagt 24792901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 41352053 - 41352000
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  41352053 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaa 41352000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 21862598 - 21862534
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||| |||||||||||||   |||||||||||||| ||||||||||| || ||||||||    
T  21862598 cgattcatgtgctccataaacacactaggtgcatttgtaacaccgaaaggcataactttatactc 21862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 38911048 - 38910976
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  38911048 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 38910976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 37679214 - 37679289
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  37679214 cgattcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 37679289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 17043406 - 17043300
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| || |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| | ||||    
T  17043406 tttcaaccagaattcacactttgacaatttagcataaagtttcttctctttcaatacttgcaagacaatcttcatatgctcagcatgttcttctttagtc 17043307  T
Q  94 ttggagt 100  Q
    |||||||    
T  17043306 ttggagt 17043300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 19661358 - 19661300
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  19661358 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 19661300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 21743774 - 21743716
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  21743774 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 21743716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 21750912 - 21751014
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttct---------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtcttgg 97  Q
    |||||||||||||||||||| ||||||||||||||||| ||||         ||| ||||||   |||||||||||||||||||||||| |||| |||||    
T  21750912 aaccagaattcacacttagacaatttagcataaagcttcttctttttcaacacttgcaaaaccaacttcaaatgctcagcatgttcttcttcagacttgg 21751011  T
Q  98 agt 100  Q
    |||    
T  21751012 agt 21751014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22503680 - 22503574
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||||||         ||| ||| |||||| ||||||| |||||||||| ||||||    
T  22503680 tttcaaccagaactcacacttagatattttagcataaagtttcttctcttttaacacttgcaagacaatcttcagatgctcaacatgttcttcttcagtc 22503581  T
Q  94 ttggagt 100  Q
    |||||||    
T  22503580 ttggagt 22503574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 21953046 - 21953118
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  21953046 ttcatgtactccataaacacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 21953118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 31538219 - 31538147
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  31538219 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 31538147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 48425041 - 48425113
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  48425041 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 48425113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 52987909 - 52987981
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  52987909 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 52987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 22360469 - 22360394
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||    |||||||||||||| ||||||||||| || || ||||| | ||||||||    
T  22360469 cgattcatgtactccataaatactcaaggtgcatttgtaacaccgaaaggcataactttgtactcataatgtccat 22360394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 16378110 - 16378151
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt 45  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  16378110 tttcaaccagaattcacactttgacaatttagcatatagctt 16378151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19108336 - 19108389
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||    
T  19108336 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaa 19108389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 430337 - 430277
Alignment:
Q  164 tcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||||||||| ||  | |||||||| ||||| ||||||||||| ||||| |||||    
T  430337 tcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcataaccttgtactc 430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 20296549 - 20296621
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||| |||||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  20296549 ttcatgtactccatgaacacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 20296621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22360634 - 22360598
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaa 41  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  22360634 ttcaaccagaattcacacttagacaatttcgcataaa 22360598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 24097825 - 24097757
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgt 231  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||||    
T  24097825 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgt 24097757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 40616 - 40722
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||||||||||||| |||||||| |||    
T  40616 tttcaaccagaattcacacttagataatttagcataaagtttcttctctttcaacacttgcaaaacagtcttcaaatgctcagcatgatcttcctcggtc 40715  T
Q  94 ttggagt 100  Q
    |||||||    
T  40716 ttggagt 40722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 55739 - 55845
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||||||         ||||||||||||||||||| |||||||||||||||||    
T  55739 tttcaaccagaattcacactttgataatttagcataaagtttcttctctttcaacacttgcaaaacagtcttcaaatgctcaacatgttcttcctcagtc 55838  T
Q  94 ttggagt 100  Q
    |||||||    
T  55839 ttggagt 55845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 74336 - 74442
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||||||||||||| |||||||| |||    
T  74336 tttcaaccagaattcacacttagataatttagcataaagtttcttctctttcaacacttgcaaaacagtcttcaaatgctcagcatgatcttcctcggtc 74435  T
Q  94 ttggagt 100  Q
    |||||||    
T  74436 ttggagt 74442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 40782 - 40857
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| |||||||||||||| |||||||| | ||||||||    
T  40782 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcatcactttatactcataatgtccat 40857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 74502 - 74577
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| |||||||||||||| |||||||| | ||||||||    
T  74502 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcatcactttatactcataatgtccat 74577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 55906 - 55980
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||  | || ||||||||||| |||||||||||||| |||||||| | ||||||||    
T  55906 gattcatgtactccataaacactccaggggcatttgtaacaccgaaaggcatcactttatactcataatgtccat 55980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 388 - 283
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||         |||||||||||||||||||||||||||||||||||    
T  388 ttcaaccagaattcacactttgacaatttagcataaagcttcttctctttcaacacttgcaacacagtcttcaaatgctcagcatgttcttcctcagtct 289  T
Q  95 tggagt 100  Q
    ||||||    
T  288 tggagt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 223 - 148
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| |||||| | |||||||||||||| ||||| |||||||| |||||||| | ||||||||    
T  223 cgattcatgtactccatcaacacaccaggtgcatttgtaacaccgaacggcatcacgttatactcataatgtccat 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 3565 - 3671
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctttt-ctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||| ||||||||||| || ||||||||||||| ||||| |||||||||         |||||||||||||||||||||||||||||||||||||    
T  3565 tttcaaccataattcacactttgacaatttagcataaaactttttctctttcaacacttccaaaacagtcttcaaatgctcagcatgttcttcctcagtc 3664  T
Q  94 ttggagt 100  Q
    |||||||    
T  3665 ttggagt 3671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 3731 - 3792
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||||| |||||||||||||||| | |||||||||||||| |||||||||||||| |||||    
T  3731 cgattcacgtactccataaacacagcaggtgcatttgtaacaccgaaaggcatcactttata 3792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 2827 - 2721
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||         |||||||||||||||||||||||||||||||| |    
T  2827 tttcaaccagaattcacactttgataatttagcataaagtttcttctctttcaacacttgcaaactagtcttcaaatgctcagcatgttcttcctcagac 2728  T
Q  94 ttggagt 100  Q
    |||||||    
T  2727 ttggagt 2721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 151094 - 151200
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa-------aacagt--cttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||       ||||    |||||||||||||||||||||||| |||| |    
T  151094 tttcaaccagaattcgcacttagacaatttcgcataaagcttattctctttcaacacttgcaacaccagcttcaaatgctcagcatgttcttcttcagac 151193  T
Q  94 ttggagt 100  Q
    |||||||    
T  151194 ttggagt 151200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 2661 - 2586
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |  | || |||||||| ||  |||||||||| |||||||| | ||||||||    
T  2661 cgattcatgtactccataaacacaccaagcgcgtttgtaacaccagaaggcatcactttatactcataatgtccat 2586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 8709547 - 8709653
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  8709547 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 8709646  T
Q  94 ttggagt 100  Q
    |||||||    
T  8709647 ttggagt 8709653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 11235541 - 11235435
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  11235541 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 11235442  T
Q  94 ttggagt 100  Q
    |||||||    
T  11235441 ttggagt 11235435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 14041804 - 14041878
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||| | ||||||||    
T  14041804 gattcatgtactccataaacacatcaggtgcatttgtaacaccgaaaggcatcactttgtactcataatgtccat 14041878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 14351834 - 14351908
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||| | ||||||||    
T  14351834 gattcatgtactccataaacacatcaggtgcatttgtaacaccgaaaggcatcactttgtactcataatgtccat 14351908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15159385 - 15159279
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  15159385 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcgtcagtc 15159286  T
Q  94 ttggagt 100  Q
    |||||||    
T  15159285 ttggagt 15159279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 15147046 - 15146971
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| | |||||||||||||| || |||||||| || |||||||||| ||||||||    
T  15147046 cgattcatgtactccataaacacaccaggtgcatttgtaacaccaaaaggcataactttatactcgtaatgtccat 15146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 14041637 - 14041743
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||| ||||||||||||| ||||||||||||||||| || |||||||||||         |||| |||||||||||||| |||||||||||||||||    
T  14041637 tttcaactagaattcacactttgataatttagcataaagtttattctctttcaacacttgcaaaacaatcttcaaatgctcatcatgttcttcctcagtc 14041736  T
Q  94 ttggagt 100  Q
    |||||||    
T  14041737 ttggagt 14041743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 14351667 - 14351773
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||| ||||||||||||| ||||||||||||||||| || |||||||||||         |||| |||||||||||||| |||||||||||||||||    
T  14351667 tttcaactagaattcacactttgataatttagcataaagtttattctctttcaacacttgcaaaacaatcttcaaatgctcatcatgttcttcctcagtc 14351766  T
Q  94 ttggagt 100  Q
    |||||||    
T  14351767 ttggagt 14351773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 44789679 - 44789573
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  44789679 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 44789580  T
Q  94 ttggagt 100  Q
    |||||||    
T  44789579 ttggagt 44789573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 14334338 - 14334444
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  14334338 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 14334437  T
Q  94 ttggagt 100  Q
    |||||||    
T  14334438 ttggagt 14334444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15147213 - 15147107
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||         |||| ||||||||||||||||||||||||| ||||||    
T  15147213 tttcaaccagaactcacacttagacaattttgcataaagtttcttctctttcaacacttgcaaaacaatcttcaaatgctcagcatgttcttcttcagtc 15147114  T
Q  94 ttggagt 100  Q
    |||||||    
T  15147113 ttggagt 15147107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 12204938 - 12204865
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||| | || ||||| ||||| |||||||||||||||||||| || | ||||||||    
T  12204938 attcatgtactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcataatgtccat 12204865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 10872632 - 10872738
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||| |||||| || |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  10872632 tttcaaccagaattcacacttagacaatttaggataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 10872731  T
Q  94 ttggagt 100  Q
    |||||||    
T  10872732 ttggagt 10872738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 11770569 - 11770463
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||| |||| | ||| |||||||||||         |||| ||||||||||||||||||||||| |||||| |    
T  11770569 tttcaaccagaattcacacttagacaatttaacatataacttcttctctttcaacacttgcaaaacaatcttcaaatgctcagcatgttctccctcagac 11770470  T
Q  94 ttggagt 100  Q
    |||||||    
T  11770469 ttggagt 11770463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 15677 - 15572
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| || ||| |||||||||||||||||| |||||||    
T  15677 ttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcatcagatgctcagcatgttcttcttcagtct 15578  T
Q  95 tggagt 100  Q
    ||||||    
T  15577 tggagt 15572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 8200570 - 8200611
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt 45  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8200570 tttcaaccagaattcacacttagacaatttagcataaagctt 8200611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 18588437 - 18588393
Alignment:
Q  56 aaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||    
T  18588437 aaacaatcttcaaatgctcagcatgttcttcttcagtcttggagt 18588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 14262383 - 14262324
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  14262383 attcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 14262324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 19149322 - 19149381
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  19149322 attcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 19149381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 12689444 - 12689550
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  12689444 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 12689543  T
Q  94 ttggagt 100  Q
    |||||||    
T  12689544 ttggagt 12689550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 13688043 - 13688089
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| |||||| |||||||||||||||||| |||||||||||||    
T  13688043 caaaacaatcttcagatgctcagcatgttcttcgtcagtcttggagt 13688089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 14956496 - 14956602
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || ||||||||         ||| ||| |||||| ||||||||||| |||||| ||||||    
T  14956496 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatcttcttcttcagtc 14956595  T
Q  94 ttggagt 100  Q
    |||||||    
T  14956596 ttggagt 14956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 15100740 - 15100682
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  15100740 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 15100682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 20748722 - 20748780
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  20748722 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 20748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 11551430 - 11551377
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||    
T  11551430 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaa 11551377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 14213616 - 14213669
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||||||    
T  14213616 tttcaaccagaattcacactttgacaatttagcataaagtttcttctctttcaa 14213669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 15626636 - 15626689
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcacc 216  Q
    ||||||||||||||||| ||| |||||||||| ||||| | |||||||||||||    
T  15626636 ttcatgtactccataaatacacctggtgcattagtaacactgaaaggcatcacc 15626689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 48813412 - 48813359
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||||||||||||  ||| ||||| ||||| ||||||||||||||    
T  48813412 attcatgtactccataaacacacttggcgcattagtaacaccgaaaggcatcac 48813359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 11301350 - 11301278
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  11301350 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 11301278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 13675564 - 13675636
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  13675564 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 13675636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 13966805 - 13966733
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  13966805 ttcatgtactccataaacacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 13966733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 16948609 - 16948537
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||  | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  16948609 ttcatatactccataaacacgccaggcgcattagtaacaccgaaaggcatcaccttttattcgtaatgtccat 16948537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 19614787 - 19614859
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  19614787 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 19614859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 26092935 - 26092863
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  26092935 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 26092863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 26116730 - 26116655
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  26116730 cgattcatgtactccataaaaacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 26116655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 11386560 - 11386511
Alignment:
Q  169 tactccataaacacatctggtgcatttgtaacgccgaaaggcatcacctt 218  Q
    ||||||||||| ||| |||| ||||| ||||| |||||||||||||||||    
T  11386560 tactccataaatacacctggcgcattagtaacaccgaaaggcatcacctt 11386511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 15342543 - 15342615
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  15342543 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 15342615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 49154413 - 49154485
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||| ||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  49154413 ttcatgtaccccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 49154485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24294246 - 24294140
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  24294246 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 24294147  T
Q  94 ttggagt 100  Q
    |||||||    
T  24294146 ttggagt 24294140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 23080286 - 23080392
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttca---------aaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||| |||| ||||||||||||||||| || ||||||||||         ||||| |||||||||||||||||||||||||||||| |    
T  23080286 tttcaaccagaattcaaactttgataatttagcataaagtttcttctctttcagcacttgcaaaacaatcttcaaatgctcagcatgttcttcctcagac 23080385  T
Q  94 ttggagt 100  Q
    |||||||    
T  23080386 ttggagt 23080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 27564297 - 27564191
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  27564297 tttcaaccagaattcacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 27564198  T
Q  94 ttggagt 100  Q
    |||||||    
T  27564197 ttggagt 27564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 18406242 - 18406167
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| ||||| ||||||||||||||||| | ||||||||    
T  18406242 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaacggcatcaccttatactcataatgtccat 18406167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 2873267 - 2873161
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||         |||| |||||| |||||||||||||||||| ||||||    
T  2873267 tttcaaccaaaattcacacttagacaatttagcataaagcttcttctccttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 2873168  T
Q  94 ttggagt 100  Q
    |||||||    
T  2873167 ttggagt 2873161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 25608325 - 25608219
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||||         |||||| |||||||||||||||||| |||||| |||| |    
T  25608325 tttcaaccagaattcacactttgacaatttagcataaagcttcttctctttcaacacttgtaaaacaatcttcaaatgctcagcatcttcttcttcagac 25608226  T
Q  94 ttggagt 100  Q
    |||||||    
T  25608225 ttggagt 25608219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 22760753 - 22760678
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| ||||||||||| || |||||||| | ||||||||    
T  22760753 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcataactttatactcataatgtccat 22760678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 23080452 - 23080527
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||||| |||||| ||||| || | ||||||||    
T  23080452 cgattcatgtactccataaacactccaggtgcatttgtaacaccgaaagacatcactttatattcataatgtccat 23080527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 23086069 - 23086014
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    |||||||||||||||||||||||| | || ||||||||||| ||||||||||||||    
T  23086069 cgattcatgtactccataaacacacccggcgcatttgtaacaccgaaaggcatcac 23086014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 16926102 - 16925996
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||||| || |||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  16926102 tttcaaccagaattcacacttagataacttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 16926003  T
Q  94 ttggagt 100  Q
    |||||||    
T  16926002 ttggagt 16925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 18963385 - 18963331
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||    
T  18963385 gattcatgtactccataaatacacctggtgcattagtaacaccgaaaggcatcac 18963331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 25114369 - 25114475
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||||||||  ||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  25114369 tttcaaccagaattcacacttagataatttgacataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 25114468  T
Q  94 ttggagt 100  Q
    |||||||    
T  25114469 ttggagt 25114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 18183663 - 18183590
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||| ||||||||||| | || ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  18183663 attcatgtacaccataaacacaccaggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 18183590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 20634404 - 20634351
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  20634404 tttcaaccagaattcacacttagacaatttcgcataaagcttcttctctttcaa 20634351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 22760919 - 22760866
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  22760919 tttcaaccagaattcacacttagacaatttcgcataaagcttcttctctttcaa 22760866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 5837623 - 5837579
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttgga 98  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  5837623 caaaacagtcttcagatgctcaacatgttcttcctcagtcttgga 5837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 20634238 - 20634163
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| ||||||||||| || || ||||| | ||||||||    
T  20634238 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcataactttgtactcataatgtccat 20634163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 16961946 - 16961840
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||| | || |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  16961946 tttcaaccagaattcacacttagatgacttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 16961847  T
Q  94 ttggagt 100  Q
    |||||||    
T  16961846 ttggagt 16961840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22828819 - 22828713
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  22828819 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 22828720  T
Q  94 ttggagt 100  Q
    |||||||    
T  22828719 ttggagt 22828713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 28261661 - 28261555
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||         || ||| |||||| |||||| ||||||||||| ||||||    
T  28261661 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctctgcatgttcttcttcagtc 28261562  T
Q  94 ttggagt 100  Q
    |||||||    
T  28261561 ttggagt 28261555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 28284255 - 28284361
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||         || ||| |||||| |||||| ||||||||||| ||||||    
T  28284255 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctctgcatgttcttcttcagtc 28284354  T
Q  94 ttggagt 100  Q
    |||||||    
T  28284355 ttggagt 28284361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 28340410 - 28340304
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||         || ||| |||||| |||||| ||||||||||| ||||||    
T  28340410 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctctgcatgttcttcttcagtc 28340311  T
Q  94 ttggagt 100  Q
    |||||||    
T  28340310 ttggagt 28340304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 19487578 - 19487525
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    |||||||||||||||||||||| | || ||||| ||||| ||||||||||||||    
T  19487578 attcatgtactccataaacacaccaggcgcattagtaacaccgaaaggcatcac 19487525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22435686 - 22435739
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| ||||||||||||||||||| |||||| || |||||||||||    
T  22435686 tttcaaccagaactcacacttagataatttaggataaagtttcttctctttcaa 22435739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22444084 - 22444137
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| ||||||||||||||||||| |||||| || |||||||||||    
T  22444084 tttcaaccagaactcacacttagataatttaggataaagtttcttctctttcaa 22444137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 27189253 - 27189306
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||||||    
T  27189253 tttcaaccagaattcacacttggacaatttagcataaagtttcttctctttcaa 27189306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 27259987 - 27259934
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||||||    
T  27259987 tttcaaccagaattcacacttggacaatttagcataaagtttcttctctttcaa 27259934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 18406408 - 18406302
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc----------aaaacagtcttcaaatgctcagcatgttcttcctcagt 92  Q
    |||||||||||||||||||||| | ||||||||||| || || |||||||||          ||| |||| ||||||||||||||||||||||| |||||    
T  18406408 tttcaaccagaattcacacttaaacaatttagcatatagtttcttctctttcaacacttgcaaaaccagt-ttcaaatgctcagcatgttcttcttcagt 18406310  T
Q  93 cttggagt 100  Q
    ||||||||    
T  18406309 cttggagt 18406302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 24366398 - 24366470
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| ||||  |||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  24366398 ttcatgtactccataaatacacctggcacattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 24366470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 25763526 - 25763462
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||| |||||||||||||   | |||||||||||||| ||||||||||| || ||||||||    
T  25763526 cgattcatatactccataaacagtccaggtgcatttgtaacaccgaaaggcataactttatactc 25763462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 25769830 - 25769902
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||| ||| | || ||||| ||||| ||||||| ||||||||||||||| | ||||||||    
T  25769830 ttcatatactccataaatacaccaggcgcattagtaacaccgaaagacatcaccttatactcataatgtccat 25769902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 19881283 - 19881342
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||||||    
T  19881283 attcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 19881342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 25763692 - 25763657
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcata 39  Q
    |||||||||||||||||| |||||||||||||||||    
T  25763692 tttcaaccagaattcacaattagataatttagcata 25763657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 19866504 - 19866610
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||| |||||||| |||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||  ||||||    
T  19866504 tttcaaccagaactcacgcttagatagtttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttctttttcagtc 19866603  T
Q  94 ttggagt 100  Q
    |||||||    
T  19866604 ttggagt 19866610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 25608157 - 25608084
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||| ||  | |||||||||||||| |||||  |||| ||||| ||||| | ||||||||    
T  25608157 attcatgtactccataaatactccaggtgcatttgtaacaccgaacagcattaccttgtactcataatgtccat 25608084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 14378211 - 14378139
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  14378211 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 14378139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 14379761 - 14379689
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  14379761 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 14379689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 19436988 - 19437060
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| ||||||   || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  19436988 ttcatatactccatgaacacactaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 19437060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 23086175 - 23086143
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttc 86  Q
    ||||||| |||||||||||||||||||||||||    
T  23086175 caaaacaatcttcaaatgctcagcatgttcttc 23086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22331388 - 22331282
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  22331388 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 22331289  T
Q  94 ttggagt 100  Q
    |||||||    
T  22331288 ttggagt 22331282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 14998240 - 14998134
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| ||||||||||||||| || ||||||    
T  14998240 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcctcttcagtc 14998141  T
Q  94 ttggagt 100  Q
    |||||||    
T  14998140 ttggagt 14998134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 16358387 - 16358493
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  16358387 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 16358486  T
Q  94 ttggagt 100  Q
    |||||||    
T  16358487 ttggagt 16358493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 19771845 - 19771951
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||| ||||||||||| ||||||    
T  19771845 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcagtc 19771944  T
Q  94 ttggagt 100  Q
    |||||||    
T  19771945 ttggagt 19771951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 34568379 - 34568485
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  34568379 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 34568478  T
Q  94 ttggagt 100  Q
    |||||||    
T  34568479 ttggagt 34568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 37289997 - 37289891
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  37289997 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 37289898  T
Q  94 ttggagt 100  Q
    |||||||    
T  37289897 ttggagt 37289891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 40710665 - 40710771
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  40710665 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 40710764  T
Q  94 ttggagt 100  Q
    |||||||    
T  40710765 ttggagt 40710771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 26737061 - 26737001
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||| |||||    
T  26737061 gattcatgtactccataaacacaccaggtgcatttgtaacaccgaaaggcatcactttata 26737001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 23473278 - 23473353
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  23473278 cgattcatgtactccatagacacacctggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 23473353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 20801282 - 20801388
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  20801282 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcagcacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 20801381  T
Q  94 ttggagt 100  Q
    |||||||    
T  20801382 ttggagt 20801388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 22136553 - 22136659
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||| |||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  22136553 tttcaaccagaattcacacttagacaatttagcaaaaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 22136652  T
Q  94 ttggagt 100  Q
    |||||||    
T  22136653 ttggagt 22136659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 27520291 - 27520397
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  27520291 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 27520390  T
Q  94 ttggagt 100  Q
    |||||||    
T  27520391 ttggagt 27520397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 27612239 - 27612345
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  27612239 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 27612338  T
Q  94 ttggagt 100  Q
    |||||||    
T  27612339 ttggagt 27612345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 27683897 - 27683795
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtcttgg 97  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||         |||| |||||| |||||||||||||||||| ||||||||||    
T  27683897 aaccagaattcacacttagacaatttagcataaagcttcttctctctcaacacttgcaaaacaatcttcagatgctcagcatgttcttcgtcagtcttgg 27683798  T
Q  98 agt 100  Q
    |||    
T  27683797 agt 27683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 29474574 - 29474468
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| ||||||||| ||||||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  29474574 tttcaaccagaattcacacttcgataatttatcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 29474475  T
Q  94 ttggagt 100  Q
    |||||||    
T  29474474 ttggagt 29474468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21337795 - 21337689
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||         ||||||| ||||||| ||||||||||||||||| |||  |    
T  21337795 tttcaaccagaattcacactttgataatttagcataaagtttcttctctttcagcacttgcaaaacaatcttcaagtgctcagcatgttcttcttcaaac 21337696  T
Q  94 ttggagt 100  Q
    |||||||    
T  21337695 ttggagt 21337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 21337629 - 21337568
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||| |||||    
T  21337629 cgattcatgtattccataaacacacctggcgcattcgtaacaccgaaaggcatcactttata 21337568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 27666990 - 27666885
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||||| ||||||||||| |||||||    
T  27666990 ttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcggcatgttcttcttcagtct 27666891  T
Q  95 tggagt 100  Q
    ||||||    
T  27666890 tggagt 27666885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 22349804 - 22349910
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  22349804 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 22349903  T
Q  94 ttggagt 100  Q
    |||||||    
T  22349904 ttggagt 22349910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 41772727 - 41772833
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||| ||||| |||||||||||||  || |||||||||||         |||| |||||| |||||| ||||||||||| ||||||    
T  41772727 tttcaaccagaattcacatttagacaatttagcataaaaattcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcagtc 41772826  T
Q  94 ttggagt 100  Q
    |||||||    
T  41772827 ttggagt 41772833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 25428318 - 25428371
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||| |||||||||||||||| ||||| ||||||||||| |||||||||||    
T  25428318 tttcaactagaattcacacttagacaatttcgcataaagcttcttctctttcaa 25428371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 14885323 - 14885251
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  14885323 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 14885251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 24796729 - 24796657
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  24796729 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 24796657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 20466434 - 20466379
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||| |||||||||| | |||||||| ||||| || |||||||||||    
T  20466434 cgattcatgtacttcataaacacacccggtgcattagtaacaccaaaaggcatcac 20466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 26737228 - 26737193
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcata 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  26737228 tttcaaccagaattcacactttgataatttagcata 26737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 37541716 - 37541641
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||| |||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  37541716 cgattcatgtattccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 37541641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 18781067 - 18781105
Alignment:
Q  62 tcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  18781067 tcttcagatgctcagcatgttcttcttcagtcttggagt 18781105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 21679110 - 21679052
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||||||    
T  21679110 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 21679052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 22234252 - 22234194
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||| ||||||| | || ||||| ||||| ||||||||||||||||||||    
T  22234252 ttcatatactccacaaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 22234194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 21562357 - 21562284
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||| | |  ||||| ||||| ||||||| |||||| ||||| || | ||||||||    
T  21562357 attcatgtactccataaacacaccagacgcattagtaacaccgaaagacatcactttatattcataatgtccat 21562284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 20344318 - 20344390
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | ||  | || ||||| |||||||||||||| || ||||||| ||| ||||    
T  20344318 ttcatgtactccataaacacaccaggcacgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 20344390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 22504715 - 22504787
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | ||  | || ||||| |||||||||||||| || ||||||| ||| ||||    
T  22504715 ttcatgtactccataaacacaccaggctcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 22504787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 25428388 - 25428424
Alignment:
Q  64 ttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  25428388 ttcaaatgctcagcatgttcttcttcagacttggagt 25428424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 25428484 - 25428536
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||||||||||||||| |   | |||||||||||||| |||||||||||    
T  25428484 cgattcatgtactccataaatagtccaggtgcatttgtaacaccgaaaggcat 25428536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 25850111 - 25850183
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  25850111 ttcatgtactccataaatacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 25850183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 23957700 - 23957806
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  23957700 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 23957799  T
Q  94 ttggagt 100  Q
    |||||||    
T  23957800 ttggagt 23957806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 14302038 - 14301932
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  14302038 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 14301939  T
Q  94 ttggagt 100  Q
    |||||||    
T  14301938 ttggagt 14301932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 27713289 - 27713395
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  27713289 tttcaactagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 27713388  T
Q  94 ttggagt 100  Q
    |||||||    
T  27713389 ttggagt 27713395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 14849259 - 14849184
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||| || | ||||||||    
T  14849259 cgattcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatctctttatattcataatgtccat 14849184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 8051682 - 8051576
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  8051682 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 8051583  T
Q  94 ttggagt 100  Q
    |||||||    
T  8051582 ttggagt 8051576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 18225505 - 18225399
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  18225505 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 18225406  T
Q  94 ttggagt 100  Q
    |||||||    
T  18225405 ttggagt 18225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 40474993 - 40475099
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  40474993 tttcaaccagaattcacacttcgacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 40475092  T
Q  94 ttggagt 100  Q
    |||||||    
T  40475093 ttggagt 40475099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 8388366 - 8388471
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||||||||||||||||| |||||||    
T  8388366 ttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtct 8388465  T
Q  95 tggagt 100  Q
    ||||||    
T  8388466 tggagt 8388471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 15072480 - 15072553
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||| | || ||||| ||||| |||||||||||||||||||| || | ||||||||    
T  15072480 attcatgtactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcataatgtccat 15072553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 18613885 - 18613777
Alignment:
Q  2 tttttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcag 91  Q
    |||||||||||||||||||||||||| ||||| |||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||    
T  18613885 tttttcaaccagaattcacacttagacaattttgcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcag 18613786  T
Q  92 tcttggagt 100  Q
    |||||||||    
T  18613785 tcttggagt 18613777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 14696235 - 14696287
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||||||||||| |||| ||||||||||| || |||||||||||    
T  14696235 ttcatgtactccataaacacacctggcgcatttgtaacaccaaaaggcatcac 14696287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 16218349 - 16218424
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||   |||||||||| ||||| |||||||| ||||| || | ||||||||    
T  16218349 cgattcatgtactccataaacacacctgacacatttgtaacaccgaagggcatcactttatattcataatgtccat 16218424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 16221669 - 16221744
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||   |||||||||| ||||| |||||||| ||||| || | ||||||||    
T  16221669 cgattcatgtactccataaacacacctgacacatttgtaacaccgaagggcatcactttatattcataatgtccat 16221744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 12478553 - 12478659
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || ||||||||         ||||||| |||||| |||||| ||||||||||| || |||    
T  12478553 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcggtc 12478652  T
Q  94 ttggagt 100  Q
    |||||||    
T  12478653 ttggagt 12478659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 14682520 - 14682626
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||  ||||||    
T  14682520 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttctttttcagtc 14682619  T
Q  94 ttggagt 100  Q
    |||||||    
T  14682620 ttggagt 14682626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 15145944 - 15145906
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag 42  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15145944 tttcaaccagaactcacacttagataatttagcataaag 15145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 16353562 - 16353460
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtcttgg 97  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| || |||||||    
T  16353562 aaccagaactcacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcggtcttgg 16353463  T
Q  98 agt 100  Q
    |||    
T  16353462 agt 16353460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 19776852 - 19776746
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || ||||||||         ||||||| |||||| |||||| ||||||||||| || |||    
T  19776852 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcggtc 19776753  T
Q  94 ttggagt 100  Q
    |||||||    
T  19776752 ttggagt 19776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 1640399 - 1640346
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||||||    
T  1640399 tttcaaccagaattcacactttgaaaatttagcataaagtttcttctctttcaa 1640346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 1647428 - 1647355
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  1647428 attcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 1647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 15145778 - 15145717
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||  | |||||||| ||||| ||||||||||| || |||||    
T  15145778 cgattcatgtactccataaacactccaggtgcattggtaacaccgaaaggcataactttata 15145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 3262944 - 3262872
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  3262944 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 3262872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 11205382 - 11205310
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  11205382 ttcatgtactccataaacacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 11205310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 16149833 - 16149905
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | |||||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  16149833 ttcatatactccatgaacacaccaggtgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 16149905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 16153979 - 16154051
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | |||||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  16153979 ttcatatactccatgaacacaccaggtgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 16154051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 29037463 - 29037427
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataa 40  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29037463 tttcaaccagaattcacacttagacaatttagcataa 29037427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 29451687 - 29451615
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  29451687 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 29451615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 44660019 - 44659944
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  44660019 cgattcatgtactccataaatacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 44659944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 15001515 - 15001457
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||| | ||||||||||||||||||||    
T  15001515 ttcatatactccataaacacaacaggcgcattagtatcaccgaaaggcatcaccttata 15001457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 16234991 - 16234945
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| |||||| |||||| ||||||||||| |||||||||||||    
T  16234991 caaaacaatcttcagatgctcggcatgttcttcttcagtcttggagt 16234945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 17093140 - 17093102
Alignment:
Q  62 tcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  17093140 tcttcagatgctcagcatgttcttcttcagtcttggagt 17093102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 14696126 - 14696158
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttc 86  Q
    ||||||| |||||||||||||||||||||||||    
T  14696126 caaaacaatcttcaaatgctcagcatgttcttc 14696158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 15145874 - 15145838
Alignment:
Q  64 ttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||| |||||||||||||||||| |||||||||||||    
T  15145874 ttcagatgctcagcatgttcttcttcagtcttggagt 15145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 15258050 - 15258122
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| || ||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  15258050 ttcatatattccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 15258122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 13254262 - 13254368
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  13254262 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 13254361  T
Q  94 ttggagt 100  Q
    |||||||    
T  13254362 ttggagt 13254368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15346803 - 15346697
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  15346803 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 15346704  T
Q  94 ttggagt 100  Q
    |||||||    
T  15346703 ttggagt 15346697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 5109169 - 5109063
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||   |||||||       ||| ||||||| |||||| |||||||||||||||||| ||||||    
T  5109169 tttcaaccagaattcacacttagacaatttagcataaagcttcttttctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 5109070  T
Q  94 ttggagt 100  Q
    |||||||    
T  5109069 ttggagt 5109063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 10007172 - 10007278
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||| ||||||||| ||||||    
T  10007172 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagaatgttcttcttcagtc 10007271  T
Q  94 ttggagt 100  Q
    |||||||    
T  10007272 ttggagt 10007278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 16637345 - 16637451
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  16637345 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 16637444  T
Q  94 ttggagt 100  Q
    |||||||    
T  16637445 ttggagt 16637451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 48427019 - 48427125
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||| ||||||||||| ||||||    
T  48427019 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcagtc 48427118  T
Q  94 ttggagt 100  Q
    |||||||    
T  48427119 ttggagt 48427125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 15261368 - 15261443
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| |||||| |||| |||||||||||||| ||||| || | ||||||||    
T  15261368 cgattcatgtactccataaacacacctggcgcatttctaacaccgaaaggcatcactttatattcataatgtccat 15261443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 3687515 - 3687621
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||         || ||| |||||| |||||| ||||||||||| ||||||    
T  3687515 tttcaaccagaattcacacttagataatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctctgcatgttcttcttcagtc 3687614  T
Q  94 ttggagt 100  Q
    |||||||    
T  3687615 ttggagt 3687621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 10907782 - 10907888
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||  ||||||||| ||||||    
T  10907782 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcaaaatgttcttcttcagtc 10907881  T
Q  94 ttggagt 100  Q
    |||||||    
T  10907882 ttggagt 10907888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 14875057 - 14874951
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  14875057 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 14874958  T
Q  94 ttggagt 100  Q
    |||||||    
T  14874957 ttggagt 14874951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15723492 - 15723386
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| || |||||||||||||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  15723492 tttcaaccagaattcacacttcgacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 15723393  T
Q  94 ttggagt 100  Q
    |||||||    
T  15723392 ttggagt 15723386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 15261202 - 15261306
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttca---------aaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||||| ||||         ||||| ||||||||||||||||||||||||| ||||||    
T  15261202 tttcaaccagaattcacacttttacaatttagcataaagcttcttctccttcagcacttgcaaaacaatcttcaaatgctcagcatgttcttcttcagtc 15261301  T
Q  94 ttgga 98  Q
    |||||    
T  15261302 ttgga 15261306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 12499820 - 12499926
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttct---------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||         ||| ||| ||| |||||| |||||||||||||||||| ||||||    
T  12499820 tttcaaccagaactcacacttagataatttagcataaagtttcttctctatcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 12499919  T
Q  94 ttggagt 100  Q
    |||||||    
T  12499920 ttggagt 12499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15587950 - 15587844
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| ||||||| |||||||||| ||||||    
T  15587950 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcaacatgttcttcttcagtc 15587851  T
Q  94 ttggagt 100  Q
    |||||||    
T  15587850 ttggagt 15587844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 16693736 - 16693842
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  16693736 tttcaaccagaactcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 16693835  T
Q  94 ttggagt 100  Q
    |||||||    
T  16693836 ttggagt 16693842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 16805505 - 16805399
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||| | ||||||    
T  16805505 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttctccttcagtc 16805406  T
Q  94 ttggagt 100  Q
    |||||||    
T  16805405 ttggagt 16805399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 17491422 - 17491528
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |    
T  17491422 tttcaaccagaattcacacttagacaatttcgcataaagcttcttctctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcttcagac 17491521  T
Q  94 ttggagt 100  Q
    |||||||    
T  17491522 ttggagt 17491528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 15229353 - 15229426
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||| ||||||||||||   || ||||| |||||||||||||||||||||||||| || | ||||||||    
T  15229353 attcatgtattccataaacacactaggcgcattagtaacgccgaaaggcatcaccttatattcataatgtccat 15229426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 15235221 - 15235294
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||| ||||||||||||   || ||||| |||||||||||||||||||||||||| || | ||||||||    
T  15235221 attcatgtattccataaacacactaggcgcattagtaacgccgaaaggcatcaccttatattcataatgtccat 15235294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 6602309 - 6602361
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  6602309 ttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaa 6602361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 53383575 - 53383523
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  53383575 ttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaa 53383523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 12269961 - 12270019
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||    
T  12269961 ttcatatactccataaacacatcaggaacattagtaacaccgaaaggcatcaccttata 12270019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 15340841 - 15340947
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  15340841 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacactcgcaagacaatcttcagatgctcagcatgttcttcttcagtc 15340940  T
Q  94 ttggagt 100  Q
    |||||||    
T  15340941 ttggagt 15340947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15401075 - 15400969
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  15401075 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacactcgcaagacaatcttcagatgctcagcatgttcttcttcagtc 15400976  T
Q  94 ttggagt 100  Q
    |||||||    
T  15400975 ttggagt 15400969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 20060612 - 20060506
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||| |||||||||||||| ||||| |||||||| || |||||||||||         |||| |||||| |||||| ||||||||||| ||||||    
T  20060612 tttcaaccaaaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcagtc 20060513  T
Q  94 ttggagt 100  Q
    |||||||    
T  20060512 ttggagt 20060506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 12888281 - 12888334
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||    
T  12888281 tttcaaccagaattcacacttagacaattttgcataaagtttcttctctttcaa 12888334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 5423487 - 5423435
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||| |||||||||||||||| |||||||||||||| || |||||||||||    
T  5423487 ttcaacaagaattcacacttagacaatttagcataaagtttcttctctttcaa 5423435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 13970498 - 13970426
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  13970498 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 13970426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 14088424 - 14088496
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  14088424 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 14088496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 16328038 - 16327966
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | || |  || ||||| ||||||||||||||||| ||||||| ||| ||||    
T  16328038 ttcatgtactccataaacacaccaggcgtgttagtaacaccgaaaggcatcaccttgtactcgtaatgaccat 16327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 31693563 - 31693491
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||| || || | ||||||||    
T  31693563 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcataatgtccat 31693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 47125695 - 47125767
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  47125695 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 47125767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 31940654 - 31940709
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcacctt 218  Q
    ||||| ||||||||||||||| | || ||||| ||||| |||||||||||||||||    
T  31940654 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcacctt 31940709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 11889778 - 11889744
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcct 88  Q
    ||||||| |||||||||||||||||||||||||||    
T  11889778 caaaacaatcttcaaatgctcagcatgttcttcct 11889744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 12180089 - 12180147
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| |||||||| |||||| | |||||||| ||||| ||||||| ||||||||||||    
T  12180089 ttcatatactccatgaacacaccaggtgcattagtaacaccgaaagacatcaccttata 12180147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 16826659 - 16826601
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | |  ||||| ||||| ||||||||||||||||||||    
T  16826659 ttcatatactccataaacacaccagacgcattagtaacaccgaaaggcatcaccttata 16826601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 41179270 - 41179336
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgt 226  Q
    |||||||| |||||||| |||||| | ||||| || ||||| |||||||||||||| || |||||||    
T  41179270 cgattcatatactccatgaacacaccgggtgcgttagtaacaccgaaaggcatcactttgtactcgt 41179336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 11959548 - 11959475
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||| || |||||||||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  11959548 attcatatattccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 11959475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 12499986 - 12500047
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||  | |||||||| ||||| || |||||||| || |||||    
T  12499986 cgattcatgtactccataaacactccaggtgcattggtaacaccaaaaggcataactttata 12500047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16755198 - 16755153
Alignment:
Q  55 aaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||| |||||||||| || ||||||||||| |||||||||||||    
T  16755198 aaaacaatcttcaaatgttccgcatgttcttcttcagtcttggagt 16755153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 16805339 - 16805278
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||  | |||||||| || || ||||||||||| || |||||    
T  16805339 cgattcatgtactccataaacactccaggtgcattggtcacaccgaaaggcataactttata 16805278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 12358905 - 12358833
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || || || ||||| ||||||||||||||||| || |||| ||||||||    
T  12358905 ttcatatactccatgaacacaccaggcgctttagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 12358833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 14579773 - 14579725
Alignment:
Q  187 ggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||| ||||| | ||||||||||||||| | ||||||||    
T  14579773 ggtgcatttgtaacaccgaacgacatcaccttatactcataatgtccat 14579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 28756069 - 28756121
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||||||| ||| | || ||||| ||||| ||||||||||||||    
T  28756069 ttcatgtactccataaaaacacccggcgcattagtaacaccgaaaggcatcac 28756121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 24711618 - 24711724
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  24711618 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 24711717  T
Q  94 ttggagt 100  Q
    |||||||    
T  24711718 ttggagt 24711724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 27372853 - 27372959
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  27372853 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 27372952  T
Q  94 ttggagt 100  Q
    |||||||    
T  27372953 ttggagt 27372959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 41607244 - 41607138
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  41607244 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 41607145  T
Q  94 ttggagt 100  Q
    |||||||    
T  41607144 ttggagt 41607138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 9485800 - 9485906
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  9485800 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 9485899  T
Q  94 ttggagt 100  Q
    |||||||    
T  9485900 ttggagt 9485906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 16926944 - 16927050
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  16926944 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 16927043  T
Q  94 ttggagt 100  Q
    |||||||    
T  16927044 ttggagt 16927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 17000584 - 17000690
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  17000584 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 17000683  T
Q  94 ttggagt 100  Q
    |||||||    
T  17000684 ttggagt 17000690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22323715 - 22323609
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||| ||||||||||| ||||||    
T  22323715 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcggcatgttcttcttcagtc 22323616  T
Q  94 ttggagt 100  Q
    |||||||    
T  22323615 ttggagt 22323609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 27219600 - 27219706
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  27219600 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 27219699  T
Q  94 ttggagt 100  Q
    |||||||    
T  27219700 ttggagt 27219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 24263954 - 24264060
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| ||||||| ||||||| || ||||||    
T  24263954 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcaacatgttcctcttcagtc 24264053  T
Q  94 ttggagt 100  Q
    |||||||    
T  24264054 ttggagt 24264060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 24677073 - 24677179
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  24677073 tttcaaccagaactcacacttagataatttagcataaagtttcttctcttttaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 24677172  T
Q  94 ttggagt 100  Q
    |||||||    
T  24677173 ttggagt 24677179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 44384429 - 44384323
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  44384429 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 44384330  T
Q  94 ttggagt 100  Q
    |||||||    
T  44384329 ttggagt 44384323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23073447 - 23073500
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  23073447 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaa 23073500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 24818923 - 24818868
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  24818923 cgattcaagtactccataaacacacctggcgcatttgtaacaccgaaaggcatcac 24818868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 10870434 - 10870540
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||         || ||| |||||| |||||||||||||||||| ||||||    
T  10870434 tttcaaccagaattcacacttagacaatttcgcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtc 10870533  T
Q  94 ttggagt 100  Q
    |||||||    
T  10870534 ttggagt 10870540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24706341 - 24706235
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||| |||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  24706341 tttcaaccagaactcacatttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 24706242  T
Q  94 ttggagt 100  Q
    |||||||    
T  24706241 ttggagt 24706235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 23189504 - 23189608
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    |||||||||||| |||||||||| |||||||||||||| || ||||||||||| ||         | |||||| ||||||||||||||||||||||||||    
T  23189504 ttcaaccagaat-cacacttagacaatttagcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcctcagtct 23189602  T
Q  95 tggagt 100  Q
    ||||||    
T  23189603 tggagt 23189608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 31832411 - 31832483
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| ||||||||||||||||| ||||||| ||| ||||    
T  31832411 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcaccttgtactcgtaatgaccat 31832483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 1065501 - 1065576
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  1065501 cgattcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 1065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21143900 - 21143794
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  21143900 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 21143801  T
Q  94 ttggagt 100  Q
    |||||||    
T  21143800 ttggagt 21143794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21324125 - 21324019
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||| ||||| ||         | |||||| |||||||||||||||||| ||||||    
T  21324125 tttcaaccagaactcacacttagatagtttagcataaagtttcttctccttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 21324026  T
Q  94 ttggagt 100  Q
    |||||||    
T  21324025 ttggagt 21324019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22734633 - 22734527
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||| ||||||||| ||||| ||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |    
T  22734633 tttcaaccagaatttacacttagacaatttcgcataaagcttcttctctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcttcagac 22734534  T
Q  94 ttggagt 100  Q
    |||||||    
T  22734533 ttggagt 22734527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24875609 - 24875503
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  24875609 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 24875510  T
Q  94 ttggagt 100  Q
    |||||||    
T  24875509 ttggagt 24875503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 23278529 - 23278601
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  23278529 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 23278601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 25255672 - 25255744
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||| |  | ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  25255672 ttcatatactccataaacacaccaagcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 25255744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 9337234 - 9337272
Alignment:
Q  62 tcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  9337234 tcttcagatgctcagcatgttcttcttcagtcttggagt 9337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 23073616 - 23073665
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    ||||||||||||||||| ||  | |||||||||||||| |||||||||||    
T  23073616 ttcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcat 23073665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 23098709 - 23098636
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||| ||||||||||| ||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  23098709 attcatatactccataaatacaccaggcgcattagtaacaccgaaaggcatcaccttctattcgtaatgaccat 23098636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 23106518 - 23106481
Alignment:
Q  63 cttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  23106518 cttcaaatgctcagcatgttcttcttcagacttggagt 23106481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 23112488 - 23112561
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||   || ||||| ||||| ||||||| |||||| ||||| || | ||||||||    
T  23112488 attcatgtactccataaacacactaggcgcattagtaacaccgaaagacatcactttatattcataatgtccat 23112561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 23106421 - 23106369
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||||||||||||||| ||  | |||||||| ||||| |||||||||||    
T  23106421 cgattcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcat 23106369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 24677239 - 24677291
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||| ||||||||||||||  | |||||||| ||||| |||||||||||    
T  24677239 cgattcatatactccataaacactacaggtgcattcgtaacaccgaaaggcat 24677291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 7408 - 7303
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    |||||||||||||||||||| || |||||||||||||| || |||||||||||         |||||||||||||||||||||||||||||| |||||||    
T  7408 ttcaaccagaattcacactttgacaatttagcataaagtttcttctctttcaacacttgcaaaacagtcttcaaatgctcagcatgttcttcttcagtct 7309  T
Q  95 tggagt 100  Q
    ||||||    
T  7308 tggagt 7303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 7243 - 7168
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| | |||||||||||||| ||||| | |||||| |||||||| | ||||||||    
T  7243 cgattcatgtactccataaacacaccaggtgcatttgtaacaccgaacgacatcactttatactcataatgtccat 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 22988749 - 22988853
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||         ||||||| ||||||||||||||||||||||||| ||||||    
T  22988749 tttcaaccagaattcacactttgacaatttagcataaagcttcttctctttcagcacttgcaaaacaatcttcaaatgctcagcatgttcttcttcagtc 22988848  T
Q  94 ttgga 98  Q
    |||||    
T  22988849 ttgga 22988853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 22247029 - 22246954
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  22247029 cgattcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 22246954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 22422488 - 22422413
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  22422488 cgattcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 22422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 17672785 - 17672679
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  17672785 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 17672686  T
Q  94 ttggagt 100  Q
    |||||||    
T  17672685 ttggagt 17672679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 18858596 - 18858702
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  18858596 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 18858695  T
Q  94 ttggagt 100  Q
    |||||||    
T  18858696 ttggagt 18858702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 19114709 - 19114815
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||||||||||| || |||    
T  19114709 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcggtc 19114808  T
Q  94 ttggagt 100  Q
    |||||||    
T  19114809 ttggagt 19114815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 23887214 - 23887288
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||   |||||||| ||||||||    
T  23887214 gattcatgtactccataaacacatctggcgcattagtaacaccgaaaggcatcactgaatactcgtaatgtccat 23887288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 22131802 - 22131697
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| ||||||||||||||||||||||||| |||||||    
T  22131802 ttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcaaatgctcagcatgttcttcttcagtct 22131703  T
Q  95 tggagt 100  Q
    ||||||    
T  22131702 tggagt 22131697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 22376049 - 22375988
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |||||    
T  22376049 cgattcatgtactccataaacacacctggtgcatttgtaatgctgaaaggcatcactttata 22375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 22522731 - 22522795
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||||||||||||||||  |||| ||||||||||| |||||||||||||| ||||||||    
T  22522731 cgattcatgtactccataaacactcctggcgcatttgtaacaccgaaaggcatcactttatactc 22522795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 15535402 - 15535508
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  15535402 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 15535501  T
Q  94 ttggagt 100  Q
    |||||||    
T  15535502 ttggagt 15535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 20017025 - 20016919
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||         |||| |||||| |||||||||||||||||| ||||||    
T  20017025 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 20016926  T
Q  94 ttggagt 100  Q
    |||||||    
T  20016925 ttggagt 20016919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 22041846 - 22041952
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  22041846 tttcaaccagaattctcacttagataatttagcataaagtttcttctctttcaacgcttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 22041945  T
Q  94 ttggagt 100  Q
    |||||||    
T  22041946 ttggagt 22041952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22118937 - 22118831
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||| ||||||| ||||||    
T  22118937 tttcgaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcacgttcttcttcagtc 22118838  T
Q  94 ttggagt 100  Q
    |||||||    
T  22118837 ttggagt 22118831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22127721 - 22127615
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||         ||||||| |||||| |||||||||| ||||||| ||||||    
T  22127721 tttcgaccagaattcacacttagacaatttagcataaagcttcttctctttcaacacttgcaaaacaatcttcagatgctcagcacgttcttcttcagtc 22127622  T
Q  94 ttggagt 100  Q
    |||||||    
T  22127621 ttggagt 22127615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 23652060 - 23652166
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| |||||||||         |||||| |||||||||||||||||||||| || ||||||    
T  23652060 tttcaaccaaaattcacacttagacaatttagcatatagcttcttctctttcaacacttgtaaaacaatcttcaaatgctcagcatgttcctcttcagtc 23652159  T
Q  94 ttggagt 100  Q
    |||||||    
T  23652160 ttggagt 23652166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 30311906 - 30311800
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  30311906 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 30311807  T
Q  94 ttggagt 100  Q
    |||||||    
T  30311806 ttggagt 30311800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 23652226 - 23652301
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| | |||||||||||||| || |||||||| || || ||||| | ||||||||    
T  23652226 cgattcatgtactccataaacacaccaggtgcatttgtaacaccaaaaggcataactttgtactcataatgtccat 23652301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21165300 - 21165194
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||| ||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  21165300 tttcaaccagaactcacacttggataatttagcataaagtttcttctcttttaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 21165201  T
Q  94 ttggagt 100  Q
    |||||||    
T  21165200 ttggagt 21165194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 22376155 - 22376109
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  22376155 caaaacaatcttcaaatgctcagcatgttcttcttcagtcttggagt 22376109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19482826 - 19482773
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  19482826 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaa 19482773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21783182 - 21783129
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  21783182 tttcaaccagaattcgcacttagacaatttagcataaagcttcttctctttcaa 21783129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 29302019 - 29301958
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    ||||||||||||||||| ||  | |||||||||||||| || ||||||||||||||||||||    
T  29302019 ttcatgtactccataaataccccaggtgcatttgtaacaccaaaaggcatcaccttatactc 29301958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 20008514 - 20008442
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||| | || ||||| ||||| |||||||||||||||||||| || | ||||||||    
T  20008514 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcataatgtccat 20008442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 27356724 - 27356796
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  27356724 ttcatgtactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 27356796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 21252963 - 21253069
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||         |||   |||||||||||||||||||||||| |||| |    
T  21252963 tttcaaccagaattctcacttagacaatttcgcataaagcttcttctctttcaatacttgcagaaccagcttcaaatgctcagcatgttcttcttcagac 21253062  T
Q  94 ttggagt 100  Q
    |||||||    
T  21253063 ttggagt 21253069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19864856 - 19864803
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  19864856 tttcaaccagaattcgcacttagacaatttcgcataaagcttcttctctttcaa 19864803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 21165134 - 21165073
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||  | |||||||| ||||| ||||||||||| || |||||    
T  21165134 cgattcatgtactccataaacactccaggtgcattcgtaacaccgaaaggcataactttata 21165073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21392623 - 21392570
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  21392623 tttcaaccagaattcgcacttagacaattttgcataaagcttcttctctttcaa 21392570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21787117 - 21787064
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  21787117 tttcaaccagaattcgcacttagacaattttgcataaagcttcttctctttcaa 21787064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 21920342 - 21920269
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||| ||  |  ||||||||||||| ||||| | ||||||||||||||| | ||||||||    
T  21920342 attcatgtactccataaatactccatgtgcatttgtaacaccgaacgacatcaccttatactcataatgtccat 21920269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 22422654 - 22422601
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||| ||||||||||| ||||||||||||||||| || |||||||||||    
T  22422654 tttcaaccataattcacactttgataatttagcataaagtttcttctctttcaa 22422601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 6605846 - 6605918
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  6605846 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 6605918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 21323872 - 21323800
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| |||||||||||||| || ||||||| ||||||||    
T  21323872 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcacattgtactcgtaatgtccat 21323800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 23657115 - 23657187
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||  | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  23657115 ttcatatactccataaacacgccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 23657187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 28983099 - 28983171
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  28983099 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 28983171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 28988318 - 28988390
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  28988318 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 28988390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 32602163 - 32602270
Alignment:
Q  4 tttcaacca-gaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagt 92  Q
    ||||||||| |||||||||||| || |||||||||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| |||||    
T  32602163 tttcaaccaagaattcacactttgacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagt 32602262  T
Q  93 cttggagt 100  Q
    ||||||||    
T  32602263 cttggagt 32602270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 19979986 - 19980092
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||| |||||||||||||||||||||  || ||||||||         ||| ||| |||||| || ||||||||||||||| ||||||    
T  19979986 tttcaaccagaaatcatacttagataatttagcataaaatttcttctctttcaacacttgcaagacaatcttcagattctcagcatgttcttcttcagtc 19980085  T
Q  94 ttggagt 100  Q
    |||||||    
T  19980086 ttggagt 19980092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 21927616 - 21927674
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| | ||||||||||||||||||    
T  21927616 ttcatatactccataaacacaccaggcgcattagtaacactgaaaggcatcaccttata 21927674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21920510 - 21920457
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||    
T  21920510 tttcaaccagaactcacacttagacaatttcgcataaagtttcttctctttcaa 21920457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 22373118 - 22373175
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcacctta 219  Q
    ||||||||||||||| |||||| | || ||||| ||||| || |||||||||||||||    
T  22373118 attcatgtactccatgaacacaccaggcgcattagtaacacccaaaggcatcacctta 22373175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 14567330 - 14567402
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  14567330 ttcatgtactccataaaaacaccaggcgccttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 14567402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 16269817 - 16269745
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||| | ||  | || ||||| |||||||||||||| || ||||||| ||| ||||    
T  16269817 ttcatgtactccataaacacaccaggcccgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 16269745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 19861623 - 19861695
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||| |||||||||| | || ||||| ||||| ||||| ||||| ||||||||||| | ||||||||    
T  19861623 ttcatatacttcataaacacaccaggcgcattagtaacaccgaagggcattaccttatactcataatgtccat 19861695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 21253129 - 21253181
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||||||||||||||| ||  | |||||||| ||||| |||||||||||    
T  21253129 cgattcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcat 21253181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 22247195 - 22247143
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttca 55  Q
    ||||||||||||||||||||| || ||||||||||| | ||| ||||||||||    
T  22247195 tttcaaccagaattcacactttgaaaatttagcatataacttcttctctttca 22247143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 17799 - 17874
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  17799 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcatcaccttatactcataatgtccat 17874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 17638 - 17691
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  17638 tttcaaccagaattcacacttagataatttagcataaagattcttctctttcaa 17691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 14635 - 14560
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  14635 cgattcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 14741 - 14695
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| |||||||||||||| |||||||||| ||| |||||||||    
T  14741 caaaacaatcttcaaatgctcaacatgttcttcttcaatcttggagt 14695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 24689 - 24614
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  24689 cgattcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 24614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24855 - 24749
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa---------aacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| |||||||||||||| | ||| |||||||||||         |||| ||||||||||||||||||||||||| ||||||    
T  24855 tttcaaccagaattcacactttgataatttagcatataacttcttctctttcaacacttgcaaaacaatcttcaaatgctcagcatgttcttcttcagtc 24756  T
Q  94 ttggagt 100  Q
    || ||||    
T  24755 ttcgagt 24749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 1131 - 1025
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |    
T  1131 tttcaaccagaattcacacttagataatttagcataaagcttcttctctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcttcagac 1032  T
Q  94 ttggagt 100  Q
    |||||||    
T  1031 ttggagt 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 965 - 904
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||||||| |||||    
T  965 cgattcatgtactccataaacactccaggtgcatttgtaacaccgaaaggcatcactttata 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 8922 - 9028
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||| |||||| |||||||||||||||||| ||||||    
T  8922 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaacaatcttcagatgctcagcatgttcttcttcagtc 9021  T
Q  94 ttggagt 100  Q
    |||||||    
T  9022 ttggagt 9028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 217575 - 217501
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  217575 gattcatgtactccataaacacacctggggcatttgtaacaccgaaaggcatcactttatattcataatgtccat 217501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 103217 - 103323
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||||         |||||||||||||||||| || |||||||||||||||| |    
T  103217 tttcaatcagaattcacactttgataatttagcataaagcttcttctctttcagcacttgcaaaacagtcttcaaatgttcggcatgttcttcctcagac 103316  T
Q  94 ttggagt 100  Q
    |||||||    
T  103317 ttggagt 103323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 103383 - 103447
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    ||||||||| |||||||||||||| |||| ||||||| ||| |||||||||||||| ||||||||    
T  103383 cgattcatgcactccataaacacacctggcgcatttgcaacaccgaaaggcatcactttatactc 103447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 25101 - 25040
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||    
T  25101 cgattcatgtactccataaacacttcaggtgcatttgtaacaccgaaaggcatcactttata 25040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 25267 - 25161
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||||||||||||||||||   ||| |||       ||| ||||||   |||||||||||||||||||||||||||| ||    
T  25267 tttcaaccagaattcacacttagataatttagcataaagtttcttatctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcctcaatc 25168  T
Q  94 ttggagt 100  Q
    |||||||    
T  25167 ttggagt 25161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 10316 - 10380
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||||||||||||| ||  | |||||||||||||| |||||||||||||||||||||||    
T  10316 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcatcaccttatactc 10380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 20389 - 20463
Alignment:
Q  161 gattcatgtactccataaacacatct-ggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||| | ||||||||    
T  20389 gattcatgtactccataaacac-tctaggtgcatttgtaacaccgaacggcatcaccttatactcataatgtccat 20463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 20222 - 20328
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||||||   |||||||||||||||||||||||| ||||||    
T  20222 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaaaaccaacttcaaatgctcagcatgttcttcttcagtc 20321  T
Q  94 ttggagt 100  Q
    |||||||    
T  20322 ttggagt 20328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 9190 - 9135
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  9190 cgattcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcac 9135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 495168 - 495243
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||| ||||| || | ||||||||    
T  495168 cgattcatgtactcaataaacacacctggcgcatttgtaacaccgaaaggcatcactttatattcataatgtccat 495243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 40137 - 40243
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  40137 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 40236  T
Q  94 ttggagt 100  Q
    |||||||    
T  40237 ttggagt 40243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 14446 - 14394
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||| ||||||||||||||||| |||||||||||||| || |||||||||||    
T  14446 ttcaaacagaattcacacttagaaaatttagcataaagtttcttctctttcaa 14394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 3675 - 3569
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  3675 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcaacacttgcaagataatcttcagatgctcagcatgttcttcttcagtc 3576  T
Q  94 ttggagt 100  Q
    |||||||    
T  3575 ttggagt 3569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 38142 - 38036
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  38142 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 38043  T
Q  94 ttggagt 100  Q
    |||||||    
T  38042 ttggagt 38036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 22855 - 22930
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||||| |||| ||| |||||||  ||||||||||||||  ||| |||| ||||||||    
T  22855 cgattcatgtactccataaacacacctggcgcagttgtaacaacgaaaggcatcaccgaatattcgtaatgtccat 22930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 3898 - 4004
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttca---------aaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||||||||| || ||||||||||| ||||| ||||||||||         | ||| ||||||||||||||||||||||||| ||||||    
T  3898 tttcaaccagaattcacactttgacaatttagcatatagcttcttctctttcagcacttgcaatacaatcttcaaatgctcagcatgttcttcttcagtc 3997  T
Q  94 ttggagt 100  Q
    |||||||    
T  3998 ttggagt 4004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 4064 - 4125
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||||| |||| | ||||||||| ||||||| |||||| |||||    
T  4064 cgattcatgtactccataaacacacctggcgtatttgtaacaccgaaagacatcactttata 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 40486 - 40414
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||| ||| | || ||||| ||||| |||||||||||||| || ||||||| ||| ||||    
T  40486 ttcatgtactccataaaaacaccaggcgcattagtaacaccgaaaggcatcactttgtactcgtaatgaccat 40414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3416 - 3469
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3416 tttcaaccagaattcacacttagataatttagcataaagtttcttctctttcaa 3469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 3582 - 3657
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||| ||| ||||| ||||||||||| || |||||||| | ||||||||    
T  3582 cgattcatgtactccataaatactccaggtgaattagtaacaccgaaaggcataactttatactcataatgtccat 3657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 38270 - 38217
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  38270 tttcaaccagaattcacacttagacaatttagcataaagcttcttctctttcaa 38217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 55316 - 55207
Alignment:
Q  1 ctttttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctca 90  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| |||    
T  55316 ctttttcaaccagaactcacacttagataatttagcataaagtttcttctctttaaacacttgcaagacaatcttcagatgctcagcatgttcttcttca 55217  T
Q  91 gtcttggagt 100  Q
    || |||||||    
T  55216 gtattggagt 55207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 935 - 860
Alignment:
Q  160 cgattcatgtactccataaacacatct-ggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||||||||||||| | ||||||||    
T  935 cgattcatgtactccataaatac-tctaggtgcatttgtaacaccgaacggcatcaccttatactcataatgtccat 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 1096 - 1045
Alignment:
Q  6 tcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  1096 tcaaccagaattcacacttagacaatttcgcataaagcttcttctctttcaa 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 6045 - 5989
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcacc 216  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||||||||||    
T  6045 cgattcatgtactccataaacacacctggcgcgtttgtaacaccgaaaggcatcacc 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 8170 - 8234
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||||||||||||| ||  | |||||||||||||| ||||| |||||||||||||||||    
T  8170 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaacggcatcaccttatactc 8234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 8004 - 8057
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  8004 tttcaaccagaattcacacttagacaatttcgcataaagcttcttctctttcaa 8057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 33487 - 33559
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||| | || ||||| ||||| |||||||||||||||||||| |||| ||||||||    
T  33487 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgtccat 33559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 7371 - 7446
Alignment:
Q  160 cgattcatgtactccataaacacatct-ggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||| | ||||||||||||||| | ||||||||    
T  7371 cgattcatgtactccataaacac-tctaggtgcatttgtaacaccgaacgacatcaccttatactcataatgtccat 7446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 7209 - 7311
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtcttgg 97  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||||         ||||||   ||||||||||||| ||||||||||||| |||||||    
T  7209 aaccagaattcacacttagacaatttcgcataaagtttcttctctttcaacacttgcaaaaccaacttcaaatgctcaacatgttcttcctcggtcttgg 7308  T
Q  98 agt 100  Q
    |||    
T  7309 agt 7311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 6021 - 6096
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||| |||||||||||| |||| ||||||||||| ||||||| |||||| ||||| || | ||||||||    
T  6021 cgattcatgtattccataaacacacctggcgcatttgtaacaccgaaagacatcactttatattcataatgtccat 6096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 13151 - 13226
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||| |||||||||||| |||| ||||||||||| ||||||| |||||| ||||| || | ||||||||    
T  13151 cgattcatgtattccataaacacacctggcgcatttgtaacaccgaaagacatcactttatattcataatgtccat 13226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 10897 - 10842
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  10897 cgattcaagtactccataaacacacctggcgcatttgtaacaccgaaaggcatcac 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 17089 - 17034
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  17089 cgattcaagtactccataaacacacctggcgcatttgtaacaccgaaaggcatcac 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 24454 - 24399
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||||||||||||||  ||| || |||||||| ||||||||||||||    
T  24454 cgattcatgtactccataaacacacttggcgcgtttgtaacaccgaaaggcatcac 24399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 1036 - 1142
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||| ||||||||||||   |||||||       ||| ||| ||| |||||| |||||||||||||||||| ||||||    
T  1036 tttcaaccagaactcacacttagatagtttagcataaagtttcttttctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 1135  T
Q  94 ttggagt 100  Q
    |||||||    
T  1136 ttggagt 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 47 - 149
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtcttgg 97  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |||||    
T  47 aaccagaattcacacttagataatttcgcataaagcttcttctctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcttcagacttgg 146  T
Q  98 agt 100  Q
    |||    
T  147 agt 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 213 - 273
Alignment:
Q  164 tcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||||||||| ||  | |||||||| ||||| ||||||||||| ||||| |||||    
T  213 tcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcataaccttgtactc 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 8015 - 7909
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| ||||||    
T  8015 tttcaaccagaactcacacttagatagtttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 7916  T
Q  94 ttggagt 100  Q
    |||||||    
T  7915 ttggagt 7909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 49257 - 49315
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||||||||||||||||||||||||    
T  49257 ttcatatactccataaacacaccaggcgcattagtaacgccgaaaggcatcaccttata 49315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 30866 - 30972
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||       | | ||| ||| |||||| |||||||||||||||||| ||||||    
T  30866 tttcaaccagaactcacacttagataatttagcataaagtttcttttcttttaacacctgcaagacaatcttcagatgctcagcatgttcttcttcagtc 30965  T
Q  94 ttggagt 100  Q
    |||||||    
T  30966 ttggagt 30972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 36332 - 36438
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag---cttttct-------ctttcaaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||       | | ||| ||| |||||| |||||||||||||||||| ||||||    
T  36332 tttcaaccagaactcacacttagataatttagcataaagtttcttttcttttaacacctgcaagacaatcttcagatgctcagcatgttcttcttcagtc 36431  T
Q  94 ttggagt 100  Q
    |||||||    
T  36432 ttggagt 36438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 11560 - 11455
Alignment:
Q  5 ttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtct 94  Q
    ||||||||||||||||||||||| |||||||||||||  || ||||||||         ||| ||| |||||| |||||||||||||||||| |||||||    
T  11560 ttcaaccagaattcacacttagacaatttagcataaaatttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtct 11461  T
Q  95 tggagt 100  Q
    ||||||    
T  11460 tggagt 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 50074 - 50127
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||| ||||| |||||||| ||||| ||||||||||| |||||||||||    
T  50074 tttcaaccaaaattcgcacttagacaatttcgcataaagcttcttctctttcaa 50127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 53688 - 53725
Alignment:
Q  63 cttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  53688 cttcaaatgctcagcatgttcttcttcagacttggagt 53725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 35480 - 35586
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||         ||| ||| |||||| |||||||||||||||||| || |||    
T  35480 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcggtc 35579  T
Q  94 ttggagt 100  Q
    |||||||    
T  35580 ttggagt 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 2869 - 2946
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccatctcat 240  Q
    ||||| ||||||||||||||| | || ||||| ||||| |||||||||||||| ||||| |||| |||||||| ||||    
T  2869 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcactttatattcgtaatgtccatatcat 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 5156 - 5202
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  5156 caaaacaatcttcaaatgctcagcatgttcttcttcagtcttggagt 5202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 11274 - 11346
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | |||||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  11274 ttcatatactccatgaacacaccaggtgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 11346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 16921 - 16967
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  16921 caaaacaatcttcaaatgctcagcatgttcttcttcagtcttggagt 16967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17027 - 17076
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaagg 209  Q
    |||||||||||||||||||||||| |||| ||||| ||||| ||||||||    
T  17027 cgattcatgtactccataaacacacctggcgcattggtaacaccgaaagg 17076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 111810 - 111775
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcata 39  Q
    |||||||||||||||||||||||| |||||||||||    
T  111810 tttcaaccagaattcacacttagacaatttagcata 111775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 57999 - 58105
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||         || ||| |||||| |||| ||||||||||||| ||||||    
T  57999 tttcaaccagaattcacacttagacaatttagcataaagtttcttctctttcaacacttggaagacaatcttcagatgcacagcatgttcttcttcagtc 58098  T
Q  94 ttggagt 100  Q
    |||||||    
T  58099 ttggagt 58105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 18388 - 18335
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  18388 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcaa 18335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 195809 - 195756
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| ||||||||||||| |||||||||||| || |||||||||||    
T  195809 tttcaaccagaactcacacttagatagtttagcataaagtttcttctctttcaa 195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 195643 - 195582
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||| ||||||||||| || ||||||||||| ||||| || |||||||| || |||||    
T  195643 cgattcatatactccataaatacttctggtgcattggtaacaccaaaaggcataactttata 195582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 86118 - 86080
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag 42  Q
    |||||||||||||||||||||||||||||||||||||||    
T  86118 tttcaaccagaattcacacttagataatttagcataaag 86080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 85552 - 85447
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| ||||||||         |||||||  |||||||||||||||||||||||| |||| |    
T  85552 tttcaaccagaattcgcacttagacaatttcgcataaagcttcttctctttcaacacttgcaaaacaagcttcaaatgctcagcatgttcttcttcagac 85453  T
Q  94 ttggag 99  Q
    ||||||    
T  85452 ttggag 85447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 85386 - 85334
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||||||||||||||| ||  | |||||||| ||||| |||||||||||    
T  85386 cgattcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcat 85334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 741 - 668
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||| |||||||| |||||| | |||||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  741 attcatatactccatgaacacaccaggtgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 1704 - 1651
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  1704 tttcaaccagaattcacacttagacaatttcgcataaagcttcttctctttcaa 1651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 5243 - 5170
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||||| | || ||||| ||||| ||||||| ||||| ||||||||| | ||||||||    
T  5243 attcatgtactccataaacacaccaggcgcattagtaacaccgaaagacatcatcttatactcataatgtccat 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 4178 - 4231
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  4178 tttcaaccagaactcacacttagataatttagcataaagtttcttctctttcaa 4231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 13489 - 13412
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccatctcat 240  Q
    ||||| ||||||||||||||| | || ||||| ||||  |||||||||||||||||||| |||| |||||||| ||||    
T  13489 ttcatatactccataaacacaccaggcgcattagtaagaccgaaaggcatcaccttatattcgtaatgtccatatcat 13412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 21668 - 21591
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccatctcat 240  Q
    ||||| ||||||||||||||| | || ||||| ||||  |||||||||||||||||||| |||| |||||||| ||||    
T  21668 ttcatatactccataaacacaccaggcgcattagtaagaccgaaaggcatcaccttatattcgtaatgtccatatcat 21591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30929 - 30982
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  30929 tttcaaccagaattcacacttagacaatttaacataaagcttcttctctttcaa 30982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 50962 - 51021
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  50962 attcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 51021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 1007 - 935
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||  | || ||||| ||||| |||||||||||||||||||| |||| ||||||||    
T  1007 ttcatatactccataaacacgccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgtccat 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 6903 - 6975
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  6903 ttcatatactctataaacacatcaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 6975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 916 - 980
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    |||||||||||||||||||| ||  | || ||||||||||| ||||| |||||||||||||||||    
T  916 cgattcatgtactccataaatactccaggcgcatttgtaacaccgaacggcatcaccttatactc 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 750 - 803
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||||| |||||| ||||| |||||||| || |||||||||||    
T  750 tttcaaccagaattcacccttagacaatttcgcataaaggttcttctctttcaa 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 16791 - 16843
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||||||||||||||| ||  |||||||||||||||| |||||||||||    
T  16791 cgattcatgtactccataaatactcctggtgcatttgtaacaccgaaaggcat 16843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 11946 - 12004
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  11946 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 12004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 16625 - 16731
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||| || ||||| ||||| ||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |    
T  16625 tttcaaccagaattcgcaattagacaatttcgcataaagcttcttctctttcaacacttacaaaaccagcttcaaatgctcagcatgttcttcttcagac 16724  T
Q  94 ttggagt 100  Q
    |||||||    
T  16725 ttggagt 16731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 28678 - 28750
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||| ||| | || ||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  28678 ttcatatactccataaatacaccaggcgcattagtaacaccgaaaggcatcaccttatactcataatgtccat 28750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 8961 - 8889
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||| |||||||||| | || ||||| ||||| |||||||||||||||||||| || | ||||||||    
T  8961 ttcatgtacttcataaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcataatgtccat 8889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 44965 - 44859
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaa---------cagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| |         || |||||| |||||||||||||||||| ||||||    
T  44965 tttcaaccagaagtcacacttagacaatttggcataaagtttcttctctttcaacatttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 44866  T
Q  94 ttggagt 100  Q
    |||||||    
T  44865 ttggagt 44859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 7815 - 7740
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||||||||||||||| ||  | |||||||||||||| ||||||||||| || || ||||| | ||||||||    
T  7815 cgattcatgtactccataaatactccaggtgcatttgtaacaccgaaaggcataactttgtactcataatgtccat 7740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7981 - 7928
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  7981 tttcaaccagaattcatacttagacaatttcgcataaagcttcttctctttcaa 7928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 3049 - 3104
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||| |||||||| ||| | |||||||| ||||| ||||||||||||||    
T  3049 cgattcatgtattccataaatacacccggtgcattagtaacaccgaaaggcatcac 3104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 10980 - 11039
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||||| | || ||||| ||||| |||||||||||||| |||||    
T  10980 attcatgtactccataaacacaccaggcgcattggtaacaccgaaaggcatcactttata 11039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 14618 - 14693
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||| |||||||||||| | ||||| ||||||||  ||||||||||||| ||||| || | ||||||||    
T  14618 cgattcatgtattccataaacacaccaggtgcctttgtaacatcgaaaggcatcactttatattcataatgtccat 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 99718 - 99643
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  99718 cgattcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 99643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 6653 - 6547
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| ||||||||         ||||||   |||||||||||||||||||||||| |||| |    
T  6653 tttcaaccagaattcgcacttagacaatttcgcataaagcttcttctctttcaacacttgcaaaaccagcttcaaatgctcagcatgttcttcttcagac 6554  T
Q  94 ttggagt 100  Q
    |||||||    
T  6553 ttggagt 6547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 9350 - 9456
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  9350 tttcaaccagaactcacacttagacaatttggcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 9449  T
Q  94 ttggagt 100  Q
    |||||||    
T  9450 ttggagt 9456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 15483 - 15437
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||    
T  15483 caaaacaatcttcaaatgctcagcttgttcttcttcagtcttggagt 15437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 15377 - 15316
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||| | | |||| ||||||||||| |||||||| ||||| |||||    
T  15377 cgattcatgtactccataaagatacctggcgcatttgtaacaccgaaaggaatcactttata 15316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 16265 - 16323
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  16265 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 28893 - 28787
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||||| || | |||||||||||||||||||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  28893 tttcaaccataacttacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 28794  T
Q  94 ttggagt 100  Q
    |||||||    
T  28793 ttggagt 28787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 28772 - 28679
Alignment:
Q  17 tcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||||||||||||||||||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| |||||||||||||    
T  28772 tcacacttagataatttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtcttggagt 28679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 44570 - 44512
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  44570 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 44512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 24367 - 24439
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||  | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  24367 ttcatatactccataaacaccccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 24439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 41849 - 41907
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  41849 ttcatatactccataaacacaccaggcgcattagtaactccgaaaggcatcaccttata 41907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 51667 - 51561
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    ||||||| |||| ||||||||||||| |||||||||||| || ||||||||         ||| ||| |||||| ||||||||||| |||||| ||||||    
T  51667 tttcaactagaactcacacttagatagtttagcataaagtttcttctctttcaacacttgcaagacaatcttcagatgctcagcatcttcttcttcagtc 51568  T
Q  94 ttggagt 100  Q
    |||||||    
T  51567 ttggagt 51561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 16142 - 16248
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| || ||||||||||  || ||||||||||| ||         | |||||| |||||||||||||||||| ||||||    
T  16142 tttcaaccagaattcacacttagacaagttagcataaattttcttctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagtc 16241  T
Q  94 ttggagt 100  Q
    |||||||    
T  16242 ttggagt 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 2404 - 2511
Alignment:
Q  4 tttcaaccagaattcacacttagat-aatttagcataaagctt-ttctctttcaaaac---------agtcttcaaatgctcagcatgttcttcctcagt 92  Q
    ||||||||||||||||||||||||  || ||||||||||| || ||||||||||| ||         | |||||| |||||||||||||||||| |||||    
T  2404 tttcaaccagaattcacacttagaccaagttagcataaaggttattctctttcaacacttgcaagacaatcttcagatgctcagcatgttcttcttcagt 2503  T
Q  93 cttggagt 100  Q
    ||||||||    
T  2504 cttggagt 2511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 45135 - 45241
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag-cttttctcttt---------caaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| ||||| ||||||||  ||||||||||         ||| ||| |||||| ||| |||||||||||||| ||||||    
T  45135 tttcaaccagaattcacacttagacaatttggcataaagttttttctctttcaatacttgcaagacaatcttcagatgatcagcatgttcttcttcagtc 45234  T
Q  94 ttggagt 100  Q
    |||||||    
T  45235 ttggagt 45241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 48667 - 48595
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  48667 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 48595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 3914 - 3963
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  3914 aaccagaattcacacatagacaatttagcataaagcttcttctctttcaa 3963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 4329 - 4386
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttat 220  Q
    ||||| ||||||||||||||| | || ||||| ||||| |||||||||||||||||||    
T  4329 ttcatatactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttat 4386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 155 - 82
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||| |||||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  155 attcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 82  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 7998 - 8051
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||| ||||| |||||||||||||||||||| || |||||||||||    
T  7998 tttcaaccagaactcacatttagataatttagcataaagtttcttctctttcaa 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 8033 - 8086
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  8033 tttcaaccagaattcgcacttagacaatttcgcataaagcttcttctctttcaa 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 17229 - 17282
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  17229 tttcaaccagaattcgcacttagacaatttcgcataaagcttcttctctttcaa 17282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 108133 - 108080
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||||||    
T  108133 tttcaaccagaattcacacttagacaatttggcataaagtttcttctctttcaa 108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 114711 - 114784
Alignment:
Q  162 attcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    |||||| || ||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  114711 attcatatattccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 114784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 10210 - 10138
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||||||||||   || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  10210 ttcatatactccataaacacactaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 10138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 19511 - 19563
Alignment:
Q  169 tactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||||||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  19511 tactccataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 19563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 19787 - 19715
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||||||||| || |  ||||| ||||| | |||||||||||||||||| |||| ||||||||    
T  19787 ttcatatactccataaacacgtcagacgcattagtaacactgaaaggcatcaccttatattcgtaatgtccat 19715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 31830 - 31758
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  31830 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 31758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 28775 - 28847
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||||| |||| | || ||||| ||||| |||||||||||||||||||| |||| ||| ||||    
T  28775 ttcatatactccataagcacaccaggcgcattagtaacaccgaaaggcatcaccttatattcgtaatgaccat 28847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 3106 - 3034
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||||||||    
T  3106 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgtccat 3034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 2005 - 1950
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    |||||||||||||||||||||||| | || ||||| ||||| ||||||| ||||||    
T  2005 cgattcatgtactccataaacacacccggcgcattagtaacaccgaaagccatcac 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 16134 - 16079
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||||||||||| |||||||||| |||| || |||||||| || |||||||||||    
T  16134 cgattcatgtactacataaacacacctggcgcgtttgtaacacccaaaggcatcac 16079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 9215 - 9262
Alignment:
Q  10 ccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||    
T  9215 ccagaattcacacttagacaatttagcataaagtttcttctctttcaa 9262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 36177 - 36240
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    ||||||||||||||||||| ||  | |||||||| ||||| ||||||||||| || ||||||||    
T  36177 gattcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcataactttatactc 36240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 20586 - 20624
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag 42  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  20586 tttcatccagaactcacacttagataatttagcataaag 20624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 36010 - 36048
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaag 42  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  36010 tttcatccagaactcacacttagataatttagcataaag 36048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 594 - 556
Alignment:
Q  62 tcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  594 tcttcaaatgctcagcatgttcttctttagtcttggagt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 496 - 435
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    |||||||||||||||||||| ||  | |||||||| ||||| ||||||||||| || |||||    
T  496 cgattcatgtactccataaatactccaggtgcattcgtaacaccgaaaggcataactttata 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 653 - 711
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| ||||| ||||| ||||||||||||||    
T  653 ttcatatactccataaacacaccaggcgcattagtaacaccgaatggcatcaccttata 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 23396 - 23290
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt-ttctctttc---------aaaacagtcttcaaatgctcagcatgttcttcctcagtc 93  Q
    |||||||||||||||||||||||| | ||| |||||||| || |||||||||         || ||| |||||| |||||||||||||||||| |||||     
T  23396 tttcaaccagaattcacacttagacagtttggcataaagtttcttctctttcaacacttgtaagacaatcttcagatgctcagcatgttcttcttcagtt 23297  T
Q  94 ttggagt 100  Q
    |||||||    
T  23296 ttggagt 23290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 14353 - 14411
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| |||||||| |||||| | |||||||| ||||| ||||||| ||||||||||||    
T  14353 ttcatatactccatgaacacaccaggtgcattagtaacaccgaaagacatcaccttata 14411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 14868 - 14794
Alignment:
Q  161 gattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||||||||||||||||| ||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  14868 gattcatgtactccataaaaacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 14794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 21297 - 21335
Alignment:
Q  62 tcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  21297 tcttcagatgctcagcatgttcttcttcagtcttggagt 21335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 47187 - 47129
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| |||| |||||||||| | || ||||| ||||| ||||||||||||||||||||    
T  47187 ttcatatacttcataaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 47129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 50028 - 49970
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| ||||||||||||||| | || ||||| |||||  |||||||||||||||||||    
T  50028 ttcatatactccataaacacaccaggcgcattagtaacatcgaaaggcatcaccttata 49970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 115243 - 115197
Alignment:
Q  54 caaaacagtcttcaaatgctcagcatgttcttcctcagtcttggagt 100  Q
    ||||||| ||||||||||||||||||||||||| |||| ||| ||||    
T  115243 caaaacaatcttcaaatgctcagcatgttcttcttcagacttagagt 115197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 4902 - 4960
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttata 221  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||||||    
T  4902 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttata 4960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 13529 - 13480
Alignment:
Q  8 aaccagaattcacacttagataatttagcataaagctt-ttctctttcaa 56  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  13529 aaccagaattcgcacttagacaatttcgcataaagcttcttctctttcaa 13480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 18663 - 18622
Alignment:
Q  4 tttcaaccagaattcacacttagataatttagcataaagctt 45  Q
    ||||||||||||||| |||||||| ||||| |||||||||||    
T  18663 tttcaaccagaattcgcacttagacaatttcgcataaagctt 18622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 22027 - 22088
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactc 224  Q
    ||||| |||||||| |||||| | ||||| || ||||| ||||||||||||||||| |||||    
T  22027 ttcatatactccatgaacacaccaggtgcgttagtaacaccgaaaggcatcaccttgtactc 22088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 987 - 915
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| ||||||||||||||| | || || || ||||| |||||||||||||| || ||||||| ||| ||||    
T  987 ttcatatactccataaacacaccaggcgcgttagtaacaccgaaaggcatcactttgtactcgtaatgaccat 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 6971 - 6939
Alignment:
Q  8 aaccagaattcacacttagataatttagcataa 40  Q
    |||||||||||||||||||| ||||||||||||    
T  6971 aaccagaattcacacttagacaatttagcataa 6939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 8522 - 8574
Alignment:
Q  160 cgattcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcat 212  Q
    |||||||||||||||||||| ||  | |||||||| ||||| |||||||||||    
T  8522 cgattcatgtactccataaatactacaggtgcattcgtaacaccgaaaggcat 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 10027 - 9975
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcac 215  Q
    ||||| |||||||| |||||| |||| ||||| ||||| ||||||||||||||    
T  10027 ttcatatactccatgaacacacctggcgcattagtaacaccgaaaggcatcac 9975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 262377 - 262449
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  262377 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 262449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 324857 - 324929
Alignment:
Q  163 ttcatgtactccataaacacatctggtgcatttgtaacgccgaaaggcatcaccttatactcgtgatgtccat 235  Q
    ||||| |||||||| |||||| | || ||||| ||||| ||||||||||||||||| || |||| ||| ||||    
T  324857 ttcatatactccatgaacacaccaggcgcattagtaacaccgaaaggcatcaccttgtattcgtaatgaccat 324929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University