View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8973_low_66 (Length: 240)
Name: NF8973_low_66
Description: NF8973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8973_low_66 |
 | |
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| [»] chr2 (8 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr1 (8 HSPs) |
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| [»] scaffold0083 (2 HSPs) |
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| [»] chr4 (5 HSPs) |
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| [»] scaffold0401 (1 HSPs) |
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| [»] chr7 (9 HSPs) |
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| [»] chr3 (6 HSPs) |
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| [»] chr5 (9 HSPs) |
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| [»] chr6 (10 HSPs) |
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| [»] scaffold0911 (1 HSPs) |
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| [»] scaffold0382 (1 HSPs) |
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| [»] scaffold0637 (1 HSPs) |
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| [»] scaffold0273 (1 HSPs) |
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| [»] scaffold0214 (4 HSPs) |
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| [»] scaffold0002 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 38317006 - 38316783
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38317006 |
atttgtgtcatttttgtaatgttttgagagtcaaatgtttgaatacatggataaatcacctcaagattcacaaaagagaagttttgcacaaattggagaa |
38316907 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
38316906 |
gaatgcaagaatttagctacttgagaaatcgtgctacgatagacctgaatcgtggcacgtttgaagcgtggaatttacctgaaaatgctggaaaaatcgt |
38316807 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
38316806 |
aacacgatggatgtgtaacgtgcc |
38316783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 9748554 - 9748331
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||| ||||||| ||| |||||| |||||||||| |||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
9748554 |
atttgtgtcgtttttgtaatgttttgagattcaaatgcttgtatacatggttaaatcagcttaagattcataaaatagaagttttgcacaaattggagaa |
9748455 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
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|
| T |
9748454 |
gaatgcaagaatttagctacttgagaaaccgtgccacgatagacctgaatcatggcacgtttgaagcgtggaatttaactgaagatgctggaaaaatcgt |
9748355 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||||||||| ||||| |
|
|
| T |
9748354 |
ggcacgatggatgtgtaaagtgcc |
9748331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 38325439 - 38325636
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| |||||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||| |||| |
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|
| T |
38325439 |
agagtcaattgtttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaataggagaagaatgcaaaaatttagctactggaga |
38325538 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |
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|
| T |
38325539 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatgctgaaaaaatcgtggcacgatggatgtgtaacatgcc |
38325636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 38327320 - 38327123
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| |||||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
38327320 |
agagtcaattgtttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaataggagaagaatgcaaaaatttagctactggaga |
38327221 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |
|
|
| T |
38327220 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatgctgaaaaaatcgtggcacgatggatgtgtaacatgcc |
38327123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 29434824 - 29435021
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
29434824 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaattggagaagaatgcaagaatttagctactggaga |
29434923 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| |
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| T |
29434924 |
aattgtgccacgatggacctgagttgtggcacgtttgaagcgtagaatttacctgaagatgctggaaaaatcgtggcacgatggatgtgcaacgtgcc |
29435021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 30994680 - 30994464
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30994680 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaattagctcaagattcataaaagagaagttttgcacaaattggagaa |
30994581 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| |||||||||| |||| || |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
30994580 |
aaatcaaagaatttagttactgga----tcgtgccacgatggacctaaatcgtggcacgtttgaaacgtggaatttacctgaagatactggaaaaatcgt |
30994485 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgt |
237 |
Q |
| |
|
||||| |||||| |||||||| |
|
|
| T |
30994484 |
ggcacgatggatatgtaacgt |
30994464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 40678701 - 40678509
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
40678701 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttt-gcacaaattgaagaagaatgcaagaattta----ctggaga |
40678607 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || ||||||||| |
|
|
| T |
40678606 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatggacgtataacgtgcc |
40678509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 4576979 - 4577095
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4576979 |
agagtcaattgcttgtatacatggttaaatcatctcaagatttataaaagagaagttctgcacaaattggagaagaatgcaagaatttagctactggaga |
4577078 |
T |
|
| Q |
143 |
aatcgtgccacgatgga |
159 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
4577079 |
aatcgtggcacgatgga |
4577095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 158; Significance: 3e-84; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 5827198 - 5827411
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5827198 |
tttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagcttaagattcataaaagagaagttttgcacaaattggagaagaattcaaga |
5827297 |
T |
|
| Q |
127 |
atttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgg |
226 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
5827298 |
atttagctactggagaaatcgtgctacgatggacctgaatcatggcgcgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatgg |
5827397 |
T |
|
| Q |
227 |
atgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5827398 |
atgtgtaacgtgcc |
5827411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 13331251 - 13331469
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13331251 |
atttgtgtcatttttgtaatgttttgagagtcaaatgtttgaatacatggataaatcagctcaagattcacaaaagagaatttttgcacaaattggagaa |
13331350 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
13331351 |
gaatgcaaaaatttagctactggaggaatcgtgccacgatggacctaaatcgtggcacgtttgaagcgtggaatttacctgaagatgct--gaaaatatt |
13331448 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgt |
237 |
Q |
| |
|
||||| ||| ||||||||||| |
|
|
| T |
13331449 |
ggcacgatgaatgtgtaacgt |
13331469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 9466343 - 9466535
Alignment:
| Q |
48 |
caaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgagaaatcg |
147 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||| |
|
|
| T |
9466343 |
caaatgtttgaatacatggataaatcagttcaagattcacaaaagagaagttttgcacaaattggataagaatacaggaatttagctactagagaaatcg |
9466442 |
T |
|
| Q |
148 |
tgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
9466443 |
tgccgcgatggacctgaatcgtggcacgtttgaagcgtggaatttacctaaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
9466535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 14187094 - 14187291
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| ||||||||||| ||||||||||| | | ||||||||||||||||||||| |||| |
|
|
| T |
14187094 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcatgaaagagaagttctgcacaaattgaaaatgaatgcaagaatttagctactggaga |
14187193 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||| |
|
|
| T |
14187194 |
aatcatgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttaactgaagatgctggaaaaatggtggcacgatggatgtgtaacgtgcc |
14187291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 39660913 - 39660694
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| |||||||||| ||| |||||| ||||| ||||||||||||| | ||||||||||||||||||||| |||| |||||||| |
|
|
| T |
39660913 |
tttttgtaatgttttgagagtcaaatacttgtatacatgg-taaataagctcaagattcatataagagaagttttgcacaaattttagaatgatgcaaga |
39660815 |
T |
|
| Q |
127 |
atttagctac-------ttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggc |
219 |
Q |
| |
|
|||||||||| | || |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
39660814 |
atttagctacaggatgctggaaaaatcgtgtcacgatggacctgaaccgtggcacgtttgaagcgtggaatttacctgaagatgctggaaaaattgtggc |
39660715 |
T |
|
| Q |
220 |
acaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
39660714 |
acgatggatgtgtaacgtgcc |
39660694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 50197847 - 50197650
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
50197847 |
agagtcaattgcttgtatacatgattaaatcatctcaagattcataaaagagaagttttgcacaaattggagaagaatgcaagaatttagctactggaga |
50197748 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
50197747 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
50197650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 25 - 240
Target Start/End: Original strand, 6195008 - 6195223
Alignment:
| Q |
25 |
catttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaa |
124 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
6195008 |
catttttgtaatgttttgagagtcaaatgtttgaatacatggataaatcaactcaagattctcaaaagagaagttttgcacaaattggagaaaaatacaa |
6195107 |
T |
|
| Q |
125 |
gaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaat |
224 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||||||| | |||||||||||||| | |||||||||||| || || |
|
|
| T |
6195108 |
gaatttagctactggagaaatcgtgccacaatgaacctgaatcgtggcacgtttgaagcgtgaagtttacctgaagatgttggaaaaatcgtggtacgat |
6195207 |
T |
|
| Q |
225 |
ggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
6195208 |
ggatgcgtaacgtgcc |
6195223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 34553642 - 34553423
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34553642 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaagattcataaaagagaagttttgcacaaattggagaa |
34553543 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||| |
|
|
| T |
34553542 |
aaatcaaagaatttagctactgga----tcgtgccacgatggacctgaatcgtggcacgtttgaagcttggaatttacctgaagatactgaaaaaatcgt |
34553447 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||||||| ||||||||||| |
|
|
| T |
34553446 |
ggcacaatggatatgtaacgtgcc |
34553423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 49718888 - 49719085
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
49718888 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaattggagaagaatgcaagaatttagctactggaga |
49718987 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||| |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||| |
|
|
| T |
49718988 |
aattgtgccacgatggacctgagttgtggcacatttgaagcgtggaatttacctgaagatgctggaaaaatcgtgacacgatggatgtgcaacgtgcc |
49719085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 49715409 - 49715606
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
49715409 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcataaattggagaagaatgcaagaatttagctactggaga |
49715508 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||| ||| ||| ||||||||| |||||||| |
|
|
| T |
49715509 |
aattgtgccacgatggacctgagttgtggcacgtttgaagcgtgaaatttacctgaagatgctggaaaaattgtgacacgatggatgtgcaacgtgcc |
49715606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 33897515 - 33897707
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
33897515 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttt-gcacaaattgaagaagaatgcaagaattta----ctggaga |
33897609 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| || ||||||||| |
|
|
| T |
33897610 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcgtggcacgatggacgtataacgtgcc |
33897707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 23442212 - 23442020
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| || |||||||||| |||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
23442212 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataacagagaagttt-gcacaaattgaagaagaatgcaagaattta----ctggaga |
23442118 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| || ||||||||| |
|
|
| T |
23442117 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagattctggaaaaatcgtggcacgatggacgtataacgtgcc |
23442020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 18391560 - 18391777
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18391560 |
atttgtgtcttttttgtaatgttttgagagtcaaatgcttgtata-atggttaaatcagctcaagattcataaaagagaagttttgcacaaattggagaa |
18391658 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||||||||||||| || |||||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||| || ||||||| || |
|
|
| T |
18391659 |
aaatt-aagaatttagctactgga----tcgtgccacgatggacttgaatcgtggcacgtttgaagcgtgaaatttacctaaagatactggaaaaattgt |
18391753 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| || || ||| ||||||||||| |
|
|
| T |
18391754 |
ggaacgatagatatgtaacgtgcc |
18391777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 28493 - 28706
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| ||| ||||||| ||| |||||| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
28493 |
tttttgtaatgttttgagattcaaatgcttgtatacatggttaaatcagcttaagattcataaaagataagttttgcacaaattcgagaagaatgcaaga |
28592 |
T |
|
| Q |
127 |
atttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgg |
226 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
28593 |
atttaactactggagaaatcgtgccacgatgggcctgaatcatggcacatttgaagcgtggaatttacctgaatatgctggaaaaatcgtggcacaatgg |
28692 |
T |
|
| Q |
227 |
atgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
28693 |
atgtgtaacgtgcc |
28706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 52286 - 52504
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
52286 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaagattcaaaaaagagaagttttgtacaaattggagaa |
52385 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| || || ||||||||| | |||||||||||||||||||||||| | |||| |||||||||||||||| |||| ||||| || ||||||| | |
|
|
| T |
52386 |
aaatcaaaaaagttagctactgg----atcgtgccacgatggacctgaatcgt-gcacatttgaagcgtggaattcaccttaagatactggaaaaatgat |
52480 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
52481 |
ggcacgatggatatgtaacgtgcc |
52504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 19928090 - 19928287
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| | ||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
19928090 |
agagtcaattgcttgtatacatgattaaatcatctcaagattcataaaagagaagttttgtacaaattggagaagaatgcaagaatttagctattggaga |
19928189 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
19928190 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatggacgtgtaacgtgcc |
19928287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 13978320 - 13978517
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| | ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
13978320 |
agagtcaattgcttgtatacatgattaaatcatctcaagattcataaaagagaagtttttcacaaattggagaagaatacaagaatttagctactggaga |
13978419 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
13978420 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcatggaatttacctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
13978517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 26704422 - 26704225
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26704422 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagaaaagttttgtacaaattggagaagaatgcaagaatttagctactggaga |
26704323 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
26704322 |
aatcgtgccacaatggacctgaatcgtggcacgtttgaagcgtggaatttatctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
26704225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 56090268 - 56090049
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
56090268 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtattcatggttaaatcagctcaagattcataaaagagaagttttgcacaaattggagaa |
56090169 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| || |||||||||| |
|
|
| T |
56090168 |
aaatcaaagaatttagctact-gag---tcgtgccacgatggacctgaatcgtggcacgtttgaagcatggaatttacctgaagatactggaaaaatcgt |
56090073 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
56090072 |
ggcacgatggatatgtaacgtgcc |
56090049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 15850365 - 15850555
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||| ||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15850365 |
tttttgtaatattttgagagtcaaatgcttgtataaaaggttaaatcagcttaagattcataaaagagaagttttgcacaaattggagaagaatgcaaga |
15850464 |
T |
|
| Q |
127 |
atttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgg |
226 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||| |||| |
|
|
| T |
15850465 |
atttagctactggagaaatcgtg---------------------gcacgtttgaagcgtggaatttacttgaatatgctgaaaaaatcgtggcacgatgg |
15850543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0401 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0401
Description:
Target: scaffold0401; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 3430 - 3643
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||| ||||||| || |||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3430 |
tttttgtaatgttttgagagtcaaatgcttgtatacatgggtaaatcaacttaagattcataaaagagaagttttgcacaaattggagaagaatgaaaga |
3529 |
T |
|
| Q |
127 |
atttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgg |
226 |
Q |
| |
|
| ||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
3530 |
agttagctattggagaaatcgtgccacgatggacctgaatcgtggcatgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatga |
3629 |
T |
|
| Q |
227 |
atgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3630 |
atgtgtaacgtgcc |
3643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 3542062 - 3541849
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3542062 |
tttttgtaatgttttgagagtcaaatgtttgtatacatggttaaatcagcttaagattcataaaagagaagttttgcacaaattgtagaagaatgcaaga |
3541963 |
T |
|
| Q |
127 |
atttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgg |
226 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||| |
|
|
| T |
3541962 |
atttagctactgaagaaatcgtgccacgatggacctaaattgtggcacgtttgaagcgtggaatttaccttaagatactggaaaaatcgtggcacgatgg |
3541863 |
T |
|
| Q |
227 |
atgtgtaacgtgcc |
240 |
Q |
| |
|
|| ||||| ||||| |
|
|
| T |
3541862 |
atatgtaatgtgcc |
3541849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 26152317 - 26152536
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaa-gattcacaaaagagaagttttgcacaaattggaga |
115 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
26152317 |
atttgtgtcctttttgtaatgttttgagagtcaaatgtttgtatacatggttaaatcagctcaaagattcataaaagtgaagttttgcacaaattggaga |
26152416 |
T |
|
| Q |
116 |
agaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcg |
215 |
Q |
| |
|
| ||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
26152417 |
aaaat-caagaatttagctactgga----tcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcg |
26152511 |
T |
|
| Q |
216 |
tggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||| |||||| ||||||||||| |
|
|
| T |
26152512 |
tggcacgatggatatgtaacgtgcc |
26152536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 6963452 - 6963666
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
6963452 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaagattcataaaagataagttttgcacaaattggagaa |
6963551 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||| |
|
|
| T |
6963552 |
aaat-caagaatttagctactgga----tcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatattggaaaaagcgt |
6963646 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacg |
236 |
Q |
| |
|
||||| |||||| ||||||| |
|
|
| T |
6963647 |
ggcacgatggatatgtaacg |
6963666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 43548379 - 43548598
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| || ||| |||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
43548379 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatgcatggttaaatcagttcaagattcataaaagagaagttttgcacaaattggagaa |
43548478 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||||||||||| | || ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| || |||||||||| |
|
|
| T |
43548479 |
aaatcaaagaatttagctattgga----tcgtgccacgatggacctgaatcgtggcacgtttgaagtgtggaatttacctaaagatactggaaaaatcgt |
43548574 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
43548575 |
ggcacgatggatatgtaacgtgcc |
43548598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 38430560 - 38430779
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38430560 |
tttttgtaatattttgagagtcaaatgcttgtatacatgg-taaataagctcaagattcataaaagagaagttttgcacaaattggagaatgatgcaaga |
38430658 |
T |
|
| Q |
127 |
atttagctacttgag-------aaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggc |
219 |
Q |
| |
|
|||||||||| || |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
38430659 |
atttagctacaggatgctgaaaaaatcgtgtcatgatggacctgaatcatggcacgtttgaagagtggaatttacctgaagatgctggaaaaatcgtggc |
38430758 |
T |
|
| Q |
220 |
acaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| | |||||||||||||||| |
|
|
| T |
38430759 |
acgacggatgtgtaacgtgcc |
38430779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 44018720 - 44018528
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
44018720 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttt-gcacaaattgaagaagaatgcaagaattta----ctggaga |
44018626 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| || ||||||||| |
|
|
| T |
44018625 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcgtggcacgatggacgtataacgtgcc |
44018528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 16546802 - 16546937
Alignment:
| Q |
68 |
taaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatc |
167 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
16546802 |
taaatcatctcaagattcataaaagagaagttttgcacaaattggagaagaatgcaagaatttagctactagagaaatcgtgctacgatggacctgaatc |
16546901 |
T |
|
| Q |
168 |
atggcacgtttgaagcgtggaatttacctgaagatg |
203 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
16546902 |
gtggcacggttgaagcatggaatttacctgaagatg |
16546937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 16618860 - 16618725
Alignment:
| Q |
68 |
taaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatc |
167 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
16618860 |
taaatcatctcaagattcataaaagagaagttttgcacaaattggagaagaatgcaagaatttagctactagagaaatcgtgctacgatggacctgaatc |
16618761 |
T |
|
| Q |
168 |
atggcacgtttgaagcgtggaatttacctgaagatg |
203 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
16618760 |
gtggcacggttgaagcatggaatttacctgaagatg |
16618725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 23468072 - 23467956
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
23468072 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaattgtagaagaatgcaagaatttagctactggaga |
23467973 |
T |
|
| Q |
143 |
aatcgtgccacgatgga |
159 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
23467972 |
aatcgtggcacgatgga |
23467956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 4249572 - 4249769
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4249572 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttttgcacaaattggagaagaatgcaagaatttagctactggaga |
4249671 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
4249672 |
aatcgtcgcacgatggacctgaatcgtggcacgtttgaagcgtgaaatttacctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
4249769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 18882342 - 18882539
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
18882342 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctacacaaattgaagaagaatgcaagaatttagctactggaga |
18882441 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
18882442 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
18882539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 36038003 - 36037792
Alignment:
| Q |
28 |
ttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaa |
127 |
Q |
| |
|
||||| |||||||| ||||||||||| ||| |||||| | ||| ||||||||||||| |||| |||| ||||| |||||||||||||||||||||||| |
|
|
| T |
36038003 |
ttttgaaatgttttgagagtcaaatgcttgtatacatggttcaat-agctcaagattcataaaaaagaaattttgtacaaattggagaagaatgcaagaa |
36037905 |
T |
|
| Q |
128 |
tttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgga |
227 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||| |
|
|
| T |
36037904 |
tttagctactggataaatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtgaaatttacctgaagatattgaaaaaatcgtggcacgatgga |
36037805 |
T |
|
| Q |
228 |
tgtgtaacgtgcc |
240 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
36037804 |
tatgtaacgtgcc |
36037792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 28326633 - 28326825
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
28326633 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttt-gcacaaattgaagaagaatgcaagaattta----ctggaga |
28326727 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| || ||||||||| |
|
|
| T |
28326728 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcgtggcacgatggacgtataacgtgcc |
28326825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 28329958 - 28330150
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
28329958 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttt-gcacaaattgaagaagaatgcaagaattta----ctggaga |
28330052 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| || ||||||||| |
|
|
| T |
28330053 |
aatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcgtggcacgatggacgtataacgtgcc |
28330150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 18550832 - 18551056
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| |||||||||||| |||| | ||||||||| ||| |||||| ||||||||||||||||||| ||||||||||| |||||||| || ||||| |
|
|
| T |
18550832 |
atttgtgtcatttttgtaatattttgaaagtcaaatgcttgtatacatggttaaatcagctcaagattcataaaagagaagtcttgcacaattttgagaa |
18550931 |
T |
|
| Q |
117 |
gaatgcaagaatttagc-tacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcg |
215 |
Q |
| |
|
||||||||||| || || | || |||||||| || ||| |||||||||||| | ||||||| ||||||||||||| |||||| | ||||||||||||| |
|
|
| T |
18550932 |
gaatgcaagaactttgcttgctggagaaatcatgacactatggacctgaattgtcgcacgttcgaagcgtggaattaacctgatgttgctagaaaaatca |
18551031 |
T |
|
| Q |
216 |
tggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
18551032 |
tggcatgatggatatgtaacgtgcc |
18551056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 34653800 - 34653604
Alignment:
| Q |
44 |
gagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgagaa |
143 |
Q |
| |
|
||||||| |||||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
34653800 |
gagtcaattgtttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaattgaagaagaatgcaagaatttagctactggagaa |
34653701 |
T |
|
| Q |
144 |
atcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
34653700 |
atcgtgccacgatggacctgaattgtagcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcaccatggatgtgtaacgtgcc |
34653604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 3194265 - 3194462
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| |||||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3194265 |
agagtcaattgtttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaattggagaagaatgcaagaatttagctactggaga |
3194364 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
3194365 |
aatcgtgccacgatggacctgaatcgtggcacatttaaagcgtgaaatttatctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
3194462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 33920318 - 33920527
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaa-gattcacaaaagagaagttttgcacaaattggagaagaatgcaag |
125 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||| ||||||||||||| |||||| |||||||||||||||||||||||| |||| ||| |||| |
|
|
| T |
33920318 |
tttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaaagattcataaaagagaagttttgcacaaattgaagaaaaat-caag |
33920416 |
T |
|
| Q |
126 |
aatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatg |
225 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||| |
|
|
| T |
33920417 |
aatttagctactgga----tcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcgttgcacaatg |
33920512 |
T |
|
| Q |
226 |
gatgtgtaacgtgcc |
240 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
33920513 |
gatatgtaacgtgcc |
33920527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 9689927 - 9690145
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| |||||||| |||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
9689927 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagttcaagattcataaaagagaagttttgcacaaattgaagaa |
9690026 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||| |||||||||||| || ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||| |
|
|
| T |
9690027 |
gaac-caaaaatttagctactgga----tcgtgccacgatgaacctgaatcgtggcacgtttgaagcgtgaaatttacctgaagatactggaaaaatcgt |
9690121 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
9690122 |
ggcacgatggatatgtaacgtgcc |
9690145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 35433420 - 35433208
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||| ||||||||| ||||||||||| || || ||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35433420 |
tttttataatgttttgagagtcaaatgcgtgtatgcatggttaaatcagctcaagattcataaaagagaagttttgcataaattggagaagaatgcaaga |
35433321 |
T |
|
| Q |
127 |
atttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgg |
226 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || || | |||||||||||||| || | |
|
|
| T |
35433320 |
atttagctacgggagaaatcgtgccacgatggacctgaattgtggcacgtttgaagcgtgtaatttacctaaaattgttggaaaaatcgtggcatgat-g |
35433222 |
T |
|
| Q |
227 |
atgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
35433221 |
atgtgtaacgtgcc |
35433208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 26337147 - 26337367
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||| |||||| ||||||||||||||||||| || |
|
|
| T |
26337147 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaagattcataaaagataagttttgcacaaattggaaaa |
26337246 |
T |
|
| Q |
117 |
gaatgcaa-gaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcg |
215 |
Q |
| |
|
|| ||| |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
26337247 |
aaaatcaaagaatttagctaccgga----tcgtgccacgatggacctgaattgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatcg |
26337342 |
T |
|
| Q |
216 |
tggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||| |||||| ||||||||||| |
|
|
| T |
26337343 |
tggcacgatggatatgtaacgtgcc |
26337367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 33321876 - 33321658
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
33321876 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaagattcataaaagagaagttttgcacaaattggagaa |
33321777 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||| ||||||||| | ||||| |||||||||||||||||| ||| ||| |||||||||||||||| ||||||||| || | ||||| || |
|
|
| T |
33321776 |
aaatcaaagaagttagctactgg----atcgtcccacgatggacctgaatcgtggtacgcttgaagcgtggaattttcctgaagatact-ggaaaattgt |
33321682 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
33321681 |
ggcacgatggatatgtaacgtgcc |
33321658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 2500959 - 2500741
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||| ||||||||||||| ||| || |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2500959 |
tttttgtaatgttttgagagtcaaatgcttgtatacatggataaatcagctca-gatccataaaagagaagtttt-cacaaattggagaatgatgcaaga |
2500862 |
T |
|
| Q |
127 |
atttagctacttgag-------aaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggc |
219 |
Q |
| |
|
|||||||||| ||| |||||||| |||||||||| |||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
2500861 |
atttagctacatgatgctggaaaaatcgtgtcacgatggacttgaatcgtggcgcgtttgaagcgtgaaatttacatgaagatgccggaaaaatcgtggc |
2500762 |
T |
|
| Q |
220 |
acaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
2500761 |
acgatggatgtgtaacgtgcc |
2500741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 40183122 - 40183020
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
40183122 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagctcaagattcataaaagagaagttttgcacaaattggagaa |
40183023 |
T |
|
| Q |
117 |
gaa |
119 |
Q |
| |
|
||| |
|
|
| T |
40183022 |
gaa |
40183020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 33680150 - 33679922
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
33680150 |
atttgtgtcctttttgtaatgttttgagagtcaaatgtttgaatacatggataaatcagctcaagattcacataagagaagttttgcacaaattggagaa |
33680051 |
T |
|
| Q |
117 |
gaatgcaagaatttagct--acttg---agaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaa |
211 |
Q |
| |
|
||||||||||||||| || | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
33680050 |
gaatgcaagaatttacctgaagatggacctaaatcgtgccacaatggacctgaatcatggcacgtttgaagcgtggaatttacctgaaaatactagaaaa |
33679951 |
T |
|
| Q |
212 |
atcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||| | |||| |||||||||||| ||||| |
|
|
| T |
33679950 |
atcatcgcacgatggatgtgtaatgtgcc |
33679922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 11409803 - 11410000
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11409803 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctgcacaaattggagaagaatgcaagaatttagctactggaga |
11409902 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||| |
|
|
| T |
11409903 |
aattgtgccacgatggacctgagttgtggcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtgacacgatggatgtgcaacgtgcc |
11410000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 26161200 - 26160989
Alignment:
| Q |
28 |
ttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaa |
127 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||||| | ||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26161200 |
ttttgtaatgttttgagagtcaaatgcttgtatacatggttcaat-agctcaagattcataaaaaagaagttttgcacaaattggaaaagaatgcaagaa |
26161102 |
T |
|
| Q |
128 |
tttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatgga |
227 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||| |
|
|
| T |
26161101 |
tttagctactggataaatcgtgccataatggacctgaatcgtggcacgtttgaagcgtggaatttacttgaagatgctgaaaaaatcatggcacgatgga |
26161002 |
T |
|
| Q |
228 |
tgtgtaacgtgcc |
240 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
26161001 |
tatgtaacgtgcc |
26160989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 28895431 - 28895215
Alignment:
| Q |
20 |
tgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaa |
119 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||| ||| |||||| ||||||| ||||||||||| |||| |||||||||||||||||||||||| || |
|
|
| T |
28895431 |
tgtgtcatttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcatctcaagattcataaaatagaagttttgcacaaattggagaaaaa |
28895332 |
T |
|
| Q |
120 |
tgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggc |
219 |
Q |
| |
|
| ||||||||||||||| || ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
28895331 |
tcaaagaatttagctactgga----tcgtgacacgatggacctgaatcgtggcacatttgaagcgtggaatttacctgaagatactggaaaaatcgtggc |
28895236 |
T |
|
| Q |
220 |
acaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| |||||| ||||||||||| |
|
|
| T |
28895235 |
acgatggatatgtaacgtgcc |
28895215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 15579834 - 15579615
Alignment:
| Q |
27 |
tttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaaga |
126 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
15579834 |
tttttgtaatgttttgagagtcaaatgcttgtatacatggttaaatcagcccaagattcataaaagataagttttgcacaaattggagaaaaatgcaaga |
15579735 |
T |
|
| Q |
127 |
atttagcta------cttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggca |
220 |
Q |
| |
|
||||| || || || ||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
15579734 |
atttacctgaagatgctggaaaaatcatgtcacgatggacctgaatcgtggcacatttgaagcgtggaatttacctgaagatgctggaaaaatcgtggca |
15579635 |
T |
|
| Q |
221 |
caatggatgtgtaacgtgcc |
240 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
15579634 |
cgatggatgtgtaacgtgcc |
15579615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 12745983 - 12746202
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12745983 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgaatacatggttaaatcagctcaagattcataaaagagaagttttgcacaaattggagaa |
12746082 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||| |||||||| | |
|
|
| T |
12746083 |
aaatcaaagaatttagctact----gtatcgtgccacgatggacctgaatcatggcacgtttgaagcatgaattttacatgaagatgctggaaaaatcat |
12746178 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| | |||||| ||||||||||| |
|
|
| T |
12746179 |
ggtgcgatggatatgtaacgtgcc |
12746202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 25328157 - 25328277
Alignment:
| Q |
120 |
tgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggc |
219 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
25328157 |
tgcaagaatttagctactagataaatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacttgaagatgctgaaaaaatcatggc |
25328256 |
T |
|
| Q |
220 |
acaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| || ||| ||||||||||| |
|
|
| T |
25328257 |
acgatagatatgtaacgtgcc |
25328277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 26160692 - 26160812
Alignment:
| Q |
120 |
tgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggc |
219 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
26160692 |
tgcaagaatttagctactagataaatcgtgccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacttgaagatgctgaaaaaatcatggc |
26160791 |
T |
|
| Q |
220 |
acaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|| || ||| ||||||||||| |
|
|
| T |
26160792 |
acgatagatatgtaacgtgcc |
26160812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 35027949 - 35027862
Alignment:
| Q |
153 |
cgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||| |||||||| ||||||| || ||||||||||||||| |||||| ||||||||||| |
|
|
| T |
35027949 |
cgatggacttgaatcgtggcacgtttgaagcgtagaatttacttgaagatactggaaaaatcgtggcacgatggatatgtaacgtgcc |
35027862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 35028044 - 35027958
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgc |
103 |
Q |
| |
|
||||||| | ||||||||||||||| |||||| ||| ||| |||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35028044 |
atttgtgtcttttttgtaatgttttgagagtccaatacttgtatacatggttaaatcagctcaagattcataaaagagaagttttgc |
35027958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0911 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0911
Description:
Target: scaffold0911; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 43 - 236
Target Start/End: Original strand, 3751 - 3945
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagtt-ttgcacaaattggagaagaatgcaagaatttagctacttgag |
141 |
Q |
| |
|
|||||||| || ||| |||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3751 |
agagtcaattgcttgtatacatgattaaatcatctcaagattcataaaagagaagttgttgcacaaattggagaagaatgcaagaatttagctactggag |
3850 |
T |
|
| Q |
142 |
aaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacg |
236 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| ||||||| |
|
|
| T |
3851 |
aaatcgtaccacgatggacctgaatcgtggcacgtttgaagcgtggaatttacctgaagatactggaaaaatagtggcacgatggatatgtaacg |
3945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0382 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0382
Description:
Target: scaffold0382; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 16338 - 16535
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
16338 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcttaaaagagaagttctacacaaattggagaagaatgcaagaatttaactactggaga |
16437 |
T |
|
| Q |
143 |
aatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
16438 |
aatcgtgcaacgatggacctaaatcgtggcacgtttgaagcgtggaatttacctgaagatgctggaaaaatcgtggcacgatggatgtgtaacgtgcc |
16535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0637
Description:
Target: scaffold0637; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 334 - 564
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| || |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
334 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcatgtatacatggttaaatcagcttaagattcataaaagagaagttttgcacaaattggagaa |
433 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttg-------agaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaa |
209 |
Q |
| |
|
|||||||||||||||||||| | | ||||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
434 |
taatgcaagaatttagctactggatgttgaaaaaatcttaccacgatggacctgaatcgtgacacgtttgaagcgtggaatttacctgaagatgctggaa |
533 |
T |
|
| Q |
210 |
aaatcgtggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| |
|
|
| T |
534 |
aaatcgtggcacgatggatgtttaacgtgcc |
564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0273 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0273
Description:
Target: scaffold0273; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 20639 - 20420
Alignment:
| Q |
17 |
atttgtgccatttttgtaatgttttaagagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaa |
116 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||||| ||| |||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
20639 |
atttgtgtcctttttgtaatgttttgagagtcaaatgcttgcatacatggttaaatccactcaagattcataaaagagaaattttgcacaaattggagaa |
20540 |
T |
|
| Q |
117 |
gaatgcaagaatttagctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttgaagcgtggaatttacctgaagatgctagaaaaatcgt |
216 |
Q |
| |
|
||| ||||||||||||| | || |||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
20539 |
aaatcaaagaatttagctattgga----tcgtgctacgatggacctgaattgtggcacgtttgaagcgtagaatttacctgaagatactggaaaaatcgt |
20444 |
T |
|
| Q |
217 |
ggcacaatggatgtgtaacgtgcc |
240 |
Q |
| |
|
||||| |||||| ||||||||||| |
|
|
| T |
20443 |
ggcacgatggatatgtaacgtgcc |
20420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0214
Description:
Target: scaffold0214; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 16835 - 16926
Alignment:
| Q |
68 |
taaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgagaaatcgtgccacgatgga |
159 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
16835 |
taaatcatctcaagattcataaaagagaagttctgcacaaattggagaagaatgcaagaatttagctactggagaaatcgtggcacgatgga |
16926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 12736 - 12852
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
12736 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctacacaaattgaagaagaatgcaagaatttagctactggaga |
12835 |
T |
|
| Q |
143 |
aatcgtgccacgatgga |
159 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
12836 |
aatcgtggcacgatgga |
12852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 26752 - 26868
Alignment:
| Q |
43 |
agagtcaaatgtttgaatacataaataaatcagctcaagattcacaaaagagaagttttgcacaaattggagaagaatgcaagaatttagctacttgaga |
142 |
Q |
| |
|
|||||||| || ||| |||||| ||||||| ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
26752 |
agagtcaattgcttgtatacatggttaaatcatctcaagattcataaaagagaagttctacacaaattgaagaagaatgcaagaatttagctactggaga |
26851 |
T |
|
| Q |
143 |
aatcgtgccacgatgga |
159 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
26852 |
aatcgtggcacgatgga |
26868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 19264 - 19310
Alignment:
| Q |
113 |
agaagaatgcaagaatttagctacttgagaaatcgtgccacgatgga |
159 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
19264 |
agaagaatgcaagaatttagctactggagaaatcgtggcacgatgga |
19310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 469267 - 469218
Alignment:
| Q |
131 |
agctacttgagaaatcgtgccacgatggacctgaatcatggcacgtttga |
180 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
469267 |
agctacttgaaaaatcgtgccacgatggacctgtatcgtggcacgtttga |
469218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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