View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8975_low_34 (Length: 249)

Name: NF8975_low_34
Description: NF8975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8975_low_34
NF8975_low_34
[»] chr5 (47 HSPs)
chr5 (10-247)||(27266649-27266882)
chr5 (11-247)||(42579945-42580177)
chr5 (10-247)||(7247015-7247248)
chr5 (9-237)||(41184241-41184464)
chr5 (10-237)||(19259612-19259835)
chr5 (10-247)||(7241839-7242073)
chr5 (10-247)||(34881774-34882006)
chr5 (10-247)||(18677256-18677488)
chr5 (10-237)||(4954048-4954271)
chr5 (33-247)||(781467-781677)
chr5 (18-237)||(16981354-16981571)
chr5 (33-247)||(21060073-21060283)
chr5 (10-247)||(7150125-7150358)
chr5 (10-247)||(35475128-35475360)
chr5 (10-237)||(3271202-3271425)
chr5 (20-247)||(7886730-7886951)
chr5 (10-147)||(2057724-2057861)
chr5 (10-247)||(27751982-27752214)
chr5 (40-247)||(10649730-10649931)
chr5 (17-179)||(11768065-11768224)
chr5 (11-154)||(26578309-26578452)
chr5 (10-234)||(30298264-30298485)
chr5 (12-247)||(43148789-43149016)
chr5 (10-147)||(43261705-43261842)
chr5 (11-179)||(19280800-19280967)
chr5 (10-237)||(20257496-20257718)
chr5 (11-154)||(42886535-42886678)
chr5 (9-179)||(15570964-15571132)
chr5 (10-179)||(22978778-22978946)
chr5 (61-247)||(30298951-30299133)
chr5 (10-179)||(28235641-28235812)
chr5 (10-179)||(7612912-7613081)
chr5 (110-247)||(43008105-43008238)
chr5 (86-147)||(41418608-41418669)
chr5 (32-118)||(6445951-6446036)
chr5 (10-79)||(30371782-30371851)
chr5 (10-134)||(19100538-19100660)
chr5 (26-74)||(27576309-27576357)
chr5 (43-119)||(6216978-6217053)
chr5 (199-247)||(8771971-8772019)
chr5 (199-247)||(30371862-30371910)
chr5 (10-84)||(36344440-36344514)
chr5 (33-82)||(13468678-13468727)
chr5 (86-179)||(19121034-19121126)
chr5 (43-175)||(13007309-13007439)
chr5 (43-179)||(13422013-13422147)
chr5 (191-247)||(19280727-19280782)
[»] chr2 (60 HSPs)
chr2 (9-247)||(8805923-8806157)
chr2 (10-235)||(9986144-9986365)
chr2 (10-247)||(83971-84203)
chr2 (10-247)||(21570198-21570430)
chr2 (10-237)||(7015511-7015734)
chr2 (10-247)||(20046872-20047105)
chr2 (10-247)||(27248941-27249174)
chr2 (9-237)||(3725237-3725461)
chr2 (33-247)||(4192918-4193128)
chr2 (20-247)||(2808263-2808485)
chr2 (10-152)||(6173690-6173832)
chr2 (12-237)||(8971428-8971648)
chr2 (10-179)||(32913299-32913467)
chr2 (12-247)||(27949486-27949717)
chr2 (37-247)||(38575276-38575481)
chr2 (22-247)||(25087107-25087326)
chr2 (10-247)||(36234066-36234289)
chr2 (17-223)||(40659746-40659948)
chr2 (34-247)||(4228207-4228414)
chr2 (12-179)||(32678965-32679131)
chr2 (18-237)||(40625857-40626072)
chr2 (10-247)||(41431086-41431319)
chr2 (70-237)||(34600332-34600495)
chr2 (36-179)||(41712643-41712785)
chr2 (10-122)||(3269022-3269134)
chr2 (10-122)||(3269581-3269693)
chr2 (10-122)||(3270140-3270252)
chr2 (10-174)||(45128262-45128426)
chr2 (10-247)||(22421793-22422019)
chr2 (43-161)||(33229012-33229130)
chr2 (10-154)||(459154-459297)
chr2 (10-179)||(17319379-17319547)
chr2 (10-179)||(27477207-27477375)
chr2 (10-161)||(37613998-37614148)
chr2 (10-110)||(30420736-30420836)
chr2 (17-125)||(8308235-8308342)
chr2 (10-73)||(34599045-34599108)
chr2 (10-112)||(26025331-26025433)
chr2 (122-247)||(31580445-31580566)
chr2 (17-126)||(39641766-39641874)
chr2 (134-247)||(30420851-30420960)
chr2 (119-247)||(3268625-3268749)
chr2 (86-147)||(9374453-9374514)
chr2 (12-57)||(34124521-34124566)
chr2 (43-179)||(4778844-4778978)
chr2 (199-247)||(7558695-7558743)
chr2 (10-114)||(32197715-32197818)
chr2 (12-119)||(44881657-44881763)
chr2 (199-237)||(45128435-45128473)
chr2 (9-58)||(9374531-9374580)
chr2 (7-119)||(13141540-13141651)
chr2 (10-58)||(31580564-31580612)
chr2 (199-247)||(33228778-33228826)
chr2 (12-72)||(38293609-38293669)
chr2 (43-118)||(19028849-19028923)
chr2 (199-237)||(6174059-6174097)
chr2 (62-179)||(7646588-7646703)
chr2 (123-179)||(17249022-17249078)
chr2 (199-247)||(21132075-21132123)
chr2 (123-179)||(31788625-31788681)
[»] chr6 (35 HSPs)
chr6 (10-247)||(4984357-4984590)
chr6 (10-247)||(7880892-7881125)
chr6 (10-247)||(12652998-12653231)
chr6 (10-247)||(33740368-33740601)
chr6 (10-247)||(7875834-7876067)
chr6 (10-247)||(25064290-25064523)
chr6 (10-161)||(33110665-33110816)
chr6 (10-247)||(8497021-8497255)
chr6 (33-247)||(17237076-17237286)
chr6 (10-247)||(8027908-8028141)
chr6 (32-247)||(4088536-4088747)
chr6 (9-179)||(10228732-10228902)
chr6 (10-247)||(23947107-23947341)
chr6 (10-247)||(35001644-35001877)
chr6 (10-237)||(16419212-16419435)
chr6 (10-247)||(8196197-8196430)
chr6 (11-159)||(4468613-4468761)
chr6 (33-237)||(16892616-16892816)
chr6 (49-247)||(17334846-17335040)
chr6 (10-247)||(28634903-28635144)
chr6 (40-153)||(7027947-7028060)
chr6 (10-125)||(12165893-12166008)
chr6 (10-180)||(25337624-25337789)
chr6 (86-247)||(12059563-12059720)
chr6 (86-152)||(20619597-20619663)
chr6 (22-136)||(33543521-33543633)
chr6 (92-154)||(34489357-34489418)
chr6 (43-179)||(33053042-33053176)
chr6 (36-119)||(1704065-1704147)
chr6 (43-179)||(23128700-23128834)
chr6 (17-68)||(4351961-4352012)
chr6 (102-136)||(8519015-8519049)
chr6 (199-247)||(7028094-7028142)
chr6 (123-179)||(14801987-14802043)
chr6 (123-179)||(21426560-21426616)
[»] chr4 (58 HSPs)
chr4 (10-247)||(38706500-38706733)
chr4 (10-247)||(4643924-4644157)
chr4 (10-247)||(10389544-10389777)
chr4 (10-247)||(25273949-25274182)
chr4 (12-247)||(9528667-9528898)
chr4 (17-247)||(45227831-45228057)
chr4 (9-234)||(44947477-44947698)
chr4 (10-247)||(53616440-53616673)
chr4 (10-225)||(49410289-49410500)
chr4 (18-247)||(34024228-34024453)
chr4 (10-247)||(50766302-50766535)
chr4 (10-247)||(51318051-51318284)
chr4 (10-177)||(43153870-43154037)
chr4 (10-237)||(47417728-47417951)
chr4 (17-247)||(2115378-2115604)
chr4 (10-247)||(1531974-1532207)
chr4 (10-247)||(9283977-9284210)
chr4 (9-235)||(10359351-10359571)
chr4 (10-127)||(31381578-31381695)
chr4 (10-247)||(43444459-43444691)
chr4 (10-247)||(20569321-20569556)
chr4 (33-237)||(37188395-37188595)
chr4 (10-247)||(868228-868462)
chr4 (11-176)||(6972877-6973042)
chr4 (9-237)||(35964776-35964999)
chr4 (11-179)||(52097770-52097938)
chr4 (9-247)||(12265519-12265760)
chr4 (10-138)||(29965701-29965829)
chr4 (63-247)||(56199215-56199395)
chr4 (91-237)||(9645324-9645466)
chr4 (11-247)||(18138707-18138935)
chr4 (11-247)||(49125920-49126148)
chr4 (12-176)||(27593686-27593848)
chr4 (10-154)||(32952630-32952773)
chr4 (86-235)||(21090284-21090429)
chr4 (17-154)||(49680611-49680747)
chr4 (10-137)||(14183868-14183994)
chr4 (10-247)||(46990921-46991153)
chr4 (10-247)||(3335954-3336179)
chr4 (9-119)||(23100744-23100853)
chr4 (10-119)||(8009275-8009384)
chr4 (10-175)||(35261257-35261423)
chr4 (170-249)||(31381504-31381582)
chr4 (92-154)||(1931630-1931692)
chr4 (10-74)||(2624562-2624627)
chr4 (30-119)||(43353468-43353556)
chr4 (43-179)||(22611284-22611418)
chr4 (44-119)||(28834164-28834238)
chr4 (17-59)||(1008322-1008364)
chr4 (9-175)||(36184598-36184762)
chr4 (43-176)||(36204256-36204387)
chr4 (104-140)||(7273707-7273743)
chr4 (11-119)||(26123329-26123436)
chr4 (12-103)||(9645479-9645570)
chr4 (43-77)||(9048765-9048799)
chr4 (10-59)||(56194667-56194716)
chr4 (43-179)||(19853386-19853520)
chr4 (191-247)||(49680774-49680829)
[»] chr7 (48 HSPs)
chr7 (10-237)||(23085575-23085798)
chr7 (10-237)||(46822069-46822292)
chr7 (10-247)||(32684722-32684955)
chr7 (11-247)||(433481-433713)
chr7 (12-247)||(26492421-26492652)
chr7 (10-237)||(35495975-35496198)
chr7 (12-237)||(42311336-42311555)
chr7 (10-237)||(22927670-22927893)
chr7 (10-247)||(2843031-2843264)
chr7 (10-247)||(21266445-21266679)
chr7 (12-247)||(26583770-26583997)
chr7 (11-247)||(35261353-35261584)
chr7 (10-161)||(35667104-35667255)
chr7 (10-247)||(42066852-42067084)
chr7 (10-135)||(14627777-14627902)
chr7 (10-247)||(34773765-34773998)
chr7 (32-247)||(7640565-7640776)
chr7 (10-176)||(6558931-6559097)
chr7 (33-247)||(45198823-45199033)
chr7 (11-237)||(17222801-17223022)
chr7 (10-247)||(20116636-20116868)
chr7 (10-247)||(23786629-23786862)
chr7 (11-154)||(19560053-19560196)
chr7 (10-247)||(46339108-46339341)
chr7 (10-247)||(1448622-1448853)
chr7 (36-247)||(1485046-1485254)
chr7 (33-179)||(13592363-13592508)
chr7 (10-152)||(48207955-48208096)
chr7 (10-176)||(31235641-31235815)
chr7 (33-247)||(23425163-23425373)
chr7 (10-179)||(46818272-46818439)
chr7 (10-144)||(6002075-6002217)
chr7 (9-176)||(32521786-32521951)
chr7 (17-121)||(42408423-42408527)
chr7 (32-179)||(20083414-20083561)
chr7 (92-154)||(17499560-17499622)
chr7 (92-154)||(17553592-17553654)
chr7 (11-65)||(17611180-17611234)
chr7 (17-175)||(43369632-43369788)
chr7 (43-179)||(34899481-34899615)
chr7 (200-247)||(14627688-14627735)
chr7 (109-179)||(28407792-28407861)
chr7 (9-119)||(46244185-46244293)
chr7 (43-179)||(8001420-8001554)
chr7 (92-136)||(17611245-17611289)
chr7 (43-179)||(19296953-19297087)
chr7 (45-179)||(13796803-13796935)
chr7 (43-179)||(19404631-19404765)
[»] chr3 (40 HSPs)
chr3 (10-247)||(25162487-25162720)
chr3 (10-247)||(25631316-25631549)
chr3 (10-247)||(3848709-3848942)
chr3 (10-247)||(12116149-12116382)
chr3 (10-247)||(32607520-32607753)
chr3 (10-177)||(42719568-42719735)
chr3 (10-224)||(49552037-49552247)
chr3 (10-247)||(17237856-17238089)
chr3 (10-247)||(44907189-44907422)
chr3 (11-247)||(36906174-36906406)
chr3 (10-161)||(39917270-39917421)
chr3 (10-247)||(30648509-30648742)
chr3 (10-247)||(46934693-46934923)
chr3 (33-179)||(29503535-29503681)
chr3 (10-247)||(4178616-4178849)
chr3 (10-247)||(35498990-35499221)
chr3 (10-247)||(50611208-50611441)
chr3 (10-247)||(38854829-38855059)
chr3 (18-136)||(2342522-2342640)
chr3 (10-179)||(14464561-14464730)
chr3 (10-237)||(51202064-51202277)
chr3 (10-176)||(22803073-22803247)
chr3 (11-179)||(46178621-46178788)
chr3 (10-154)||(36734572-36734715)
chr3 (12-247)||(38440381-38440602)
chr3 (10-161)||(31794122-31794271)
chr3 (10-179)||(25849861-25850029)
chr3 (10-179)||(21488142-21488313)
chr3 (40-235)||(21916555-21916745)
chr3 (11-123)||(6910622-6910731)
chr3 (33-246)||(37169304-37169512)
chr3 (42-119)||(30293419-30293495)
chr3 (149-247)||(2342638-2342732)
chr3 (43-179)||(21431693-21431827)
chr3 (43-179)||(42460829-42460963)
chr3 (121-179)||(50194209-50194267)
chr3 (96-177)||(19862204-19862284)
chr3 (55-179)||(21533683-21533805)
chr3 (43-179)||(43488464-43488598)
chr3 (43-179)||(52922991-52923125)
[»] chr1 (56 HSPs)
chr1 (10-247)||(9686995-9687227)
chr1 (10-247)||(25406074-25406307)
chr1 (10-247)||(45425856-45426089)
chr1 (10-247)||(51868435-51868668)
chr1 (10-247)||(51871921-51872154)
chr1 (10-229)||(28035197-28035410)
chr1 (10-237)||(9919447-9919668)
chr1 (10-237)||(50271940-50272163)
chr1 (10-248)||(5324348-5324581)
chr1 (10-247)||(30879133-30879366)
chr1 (10-247)||(45805619-45805851)
chr1 (10-234)||(40880816-40881035)
chr1 (10-237)||(5701317-5701540)
chr1 (12-247)||(7342782-7343013)
chr1 (17-237)||(11454000-11454218)
chr1 (10-247)||(9172548-9172781)
chr1 (10-247)||(9180530-9180763)
chr1 (10-247)||(19715685-19715918)
chr1 (10-247)||(50165889-50166122)
chr1 (17-247)||(20266367-20266593)
chr1 (10-247)||(33291208-33291441)
chr1 (10-247)||(50148428-50148661)
chr1 (11-175)||(7997848-7998012)
chr1 (32-247)||(3871488-3871698)
chr1 (10-247)||(35584413-35584641)
chr1 (43-247)||(19723404-19723604)
chr1 (9-247)||(34519189-34519419)
chr1 (10-161)||(30818223-30818374)
chr1 (43-237)||(32676935-32677120)
chr1 (10-179)||(7311960-7312128)
chr1 (33-154)||(14545598-14545719)
chr1 (10-179)||(18569165-18569333)
chr1 (10-179)||(48365620-48365788)
chr1 (10-176)||(38520392-38520554)
chr1 (10-154)||(39987447-39987589)
chr1 (91-247)||(11709497-11709649)
chr1 (40-178)||(33817023-33817161)
chr1 (40-178)||(33876493-33876631)
chr1 (10-247)||(40646728-40646964)
chr1 (10-179)||(27872796-27872964)
chr1 (11-176)||(41081561-41081726)
chr1 (10-179)||(39927409-39927577)
chr1 (10-121)||(31836865-31836975)
chr1 (107-247)||(31836989-31837125)
chr1 (91-247)||(27914897-27915046)
chr1 (111-247)||(48217596-48217728)
chr1 (94-176)||(31130450-31130532)
chr1 (10-53)||(33817161-33817204)
chr1 (10-53)||(33876631-33876674)
chr1 (43-179)||(14872723-14872857)
chr1 (43-179)||(21947492-21947626)
chr1 (43-179)||(47132987-47133121)
chr1 (202-247)||(14545721-14545766)
chr1 (106-179)||(44637567-44637644)
chr1 (123-179)||(49627075-49627131)
chr1 (43-123)||(51916595-51916673)
[»] chr8 (38 HSPs)
chr8 (10-234)||(11464232-11464452)
chr8 (12-247)||(14906713-14906944)
chr8 (10-247)||(4809025-4809258)
chr8 (10-234)||(2655931-2656151)
chr8 (11-233)||(32724285-32724503)
chr8 (10-247)||(9072779-9073012)
chr8 (10-247)||(9619147-9619380)
chr8 (10-247)||(11725742-11725974)
chr8 (10-247)||(29777280-29777513)
chr8 (10-176)||(42447884-42448050)
chr8 (10-247)||(9498389-9498622)
chr8 (10-237)||(44099736-44099957)
chr8 (9-236)||(43192148-43192370)
chr8 (10-237)||(23851294-23851517)
chr8 (10-247)||(34611865-34612098)
chr8 (10-175)||(43889982-43890147)
chr8 (10-237)||(33896143-33896370)
chr8 (17-235)||(37565681-37565895)
chr8 (33-179)||(43135433-43135579)
chr8 (10-175)||(11196950-11197109)
chr8 (10-179)||(16794353-16794521)
chr8 (10-247)||(28239894-28240135)
chr8 (9-147)||(17949295-17949431)
chr8 (10-247)||(33342498-33342727)
chr8 (9-138)||(19876271-19876399)
chr8 (10-179)||(33298916-33299084)
chr8 (10-161)||(27746987-27747136)
chr8 (54-237)||(44578135-44578314)
chr8 (103-247)||(11267162-11267302)
chr8 (18-157)||(35580526-35580664)
chr8 (10-176)||(15597025-15597190)
chr8 (12-179)||(15046957-15047122)
chr8 (17-154)||(39153021-39153158)
chr8 (10-153)||(14913138-14913279)
chr8 (43-179)||(31013480-31013614)
chr8 (54-176)||(7677158-7677278)
chr8 (191-237)||(19876437-19876482)
chr8 (11-72)||(35812723-35812784)
[»] scaffold0311 (1 HSPs)
scaffold0311 (7-247)||(8742-8978)
[»] scaffold0146 (1 HSPs)
scaffold0146 (10-247)||(16110-16343)
[»] scaffold0495 (1 HSPs)
scaffold0495 (9-179)||(5451-5621)
[»] scaffold0014 (1 HSPs)
scaffold0014 (9-247)||(201163-201396)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-247)||(83227-83454)
[»] scaffold0426 (1 HSPs)
scaffold0426 (10-179)||(6359-6528)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-247)||(361589-361821)
[»] scaffold0136 (1 HSPs)
scaffold0136 (17-119)||(34695-34796)
[»] scaffold0009 (1 HSPs)
scaffold0009 (43-179)||(57962-58096)
[»] scaffold0127 (1 HSPs)
scaffold0127 (43-179)||(15573-15707)
[»] scaffold0088 (1 HSPs)
scaffold0088 (43-179)||(50857-50991)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-54)||(453986-454030)
[»] scaffold0443 (1 HSPs)
scaffold0443 (199-247)||(4444-4492)


Alignment Details
Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 27266882 - 27266649
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  27266882 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtcatggatattccggtcactttaat 27266783  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||||  |||||||| |||||| |||||| |||| |||||||||||    ||| ||||| |||||| ||||||||||    
T  27266782 tttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcatttacg-tttttagcgg 27266688  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  27266687 tgttgaatgatgtaatctctcgatttgaatgaacgaata 27266649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 42579945 - 42580177
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||||||||||    
T  42579945 gtgttcattttattcatatttaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaatt 42580044  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    |||||||||||||||| ||| |||||||||||||||| |||||| ||| || |||| ||||||||      |||| |||| ||||||| |||||||||||    
T  42580045 ttatcatatatttttgcagatattatgccgttatatgctattaacttgaatgctgtgagtttgtt----tatagattcatcctttacg-tttttagcggt 42580139  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  42580140 gttgaatgatgtaatctctcgatttgaatgaatgaata 42580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 7247015 - 7247248
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| | ||||||||||| ||||||||||||||| ||||||||||||| || |||||| |||| |||||||||| ||||||||    
T  7247015 ggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaat 7247114  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  7247115 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 7247209  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  7247210 tgttgaatgatgtaatctctcgatttgaatgaatgaata 7247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 41184464 - 41184241
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||| |||| ||||||| ||||||||||    
T  41184464 tggtgttcgtttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaa 41184365  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||  | ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| |||||||||    
T  41184364 ttttatcatatatttttgccggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcg 41184270  T
Q  208 gtgttaaatgatgtaatctctcgatttgaa 237  Q
    ||||| ||||||||||||||||||||||||    
T  41184269 gtgtt-aatgatgtaatctctcgatttgaa 41184241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 19259835 - 19259612
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |  ||| |||| |||||||||||||||||||    
T  19259835 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccggtcactttaat 19259736  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| | | |||||||| |||||||||     
T  19259735 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agatttattctttacg-tttttagcga 19259641  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| || |||||||||||||||||||||    
T  19259640 tgttgaacgatgtaatctctcgatttgaa 19259612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 7241839 - 7242073
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtc-actttaa 108  Q
    |||||| |||| |||| |||| | ||||||||||| ||||||||||||||| ||||||||||||| || |||||| |||| ||||||||||  |||||||    
T  7241839 ggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggttgactttaa 7241938  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| |||||||||    
T  7241939 ttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcg 7242033  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||| |||||||||||||||||||||||| ||| |||||    
T  7242034 gtgttgaatgatgtaatctctcgatttgaatgaatgaata 7242073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 34881774 - 34882006
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| || |||||| |||| ||||||| |||||||||||    
T  34881774 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattcc-gtcactttaat 34881872  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    | |||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||| ||    ||| |||| ||||| | ||||||||||    
T  34881873 tatatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgc----agattcatcctttatg-tttttagcgg 34881967  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  34881968 tgttgaatgatgtaatctctcgatttgaatgaatgaata 34882006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 18677488 - 18677256
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||| ||||||| | ||  |||||||| ||||| || |||||  |||| |||||||||||||||||||    
T  18677488 ggtgttcatttgattcatattgaaagatcgattatttaatcaaataatttggcgtcaacattgcagatccggagaccatggatattccggtcactttaat 18677389  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggt 209  Q
    |||||||||||||||||||  ||||||||||||||||| |||||| ||||||  |||  ||||||||||    ||| ||||| ||||| |||||||||||    
T  18677388 tttatcatatatttttgtaagcattatgccgttatatgctattaacttggatgttgtgtgtttgttcgc----agattcatccttacg-tttttagcggt 18677294  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  18677293 gttgaatgatgtaatctctcgatttgaatgaatgaata 18677256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 4954048 - 4954271
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  4954048 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagattcggaggccatgaatattccggtgactttaat 4954147  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| || |||  ||| ||||||||| |    | | |||| ||||||  ||||||||||    
T  4954148 tttatcatatatttttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcac----atattcatcctttac-atttttagcgg 4954242  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| || |||||||||||||||||||||    
T  4954243 tgttgaacgatgtaatctctcgatttgaa 4954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 247
Target Start/End: Original strand, 781467 - 781677
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    |||||| |||||||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  781467 aagatcaattattcaatcaaaaatttgagcgtcaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatttttgtagaca 781566  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||||||||||||| |||||| ||||||  ||| ||| | |||||    ||| |||| ||| ||| |||||||||||||| ||||||||||||||||||    
T  781567 ttatgccgttatatgctattaacttggatgttgtgagtatattcgc----agattcatccttcacg-tttttagcggtgttgaatgatgtaatctctcga 781661  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  781662 tttgaatgaatgaata 781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 16981354 - 16981571
Alignment:
Q  18 tttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatc-- 115  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| || ||||||||||| |||||||||| ||||||||||||||      
T  16981354 tttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcatcgttgcagatccggaggtcatggatattccggtgactttaattttatcat 16981453  T
Q  116 atatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcggtgttaa 214  Q
    |||||||||||||| ||||||  ||||||||| |||||| ||||||  ||| |||||||||||    ||| ||| |||||||| |||||||||||||| |    
T  16981454 atatatttttgtaggcattatatcgttatatgctattaacttggatgttgtgagtttgttcgc----agattcattctttacg-tttttagcggtgttga 16981548  T
Q  215 atgatgtaatctctcgatttgaa 237  Q
    |||||||||| ||||||||||||    
T  16981549 atgatgtaatatctcgatttgaa 16981571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 247
Target Start/End: Complemental strand, 21060283 - 21060073
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  21060283 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 21060184  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||| ||||||||  ||| || ||||||  ||| ||| ||||    |||||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  21060183 ttatgtcgttatattctatcaacttggatgttgtgagtatgtt----cgtagattcatcctttacg-tttttagcggtgttgaatgatgtaatctctcga 21060089  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  21060088 tttgaatgaatgaata 21060073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 7150358 - 7150125
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||  ||| ||||||| ||||||||||||||||||||  ||||||||||||| || |||||  |||| ||||| |||| ||||||||    
T  7150358 ggtgttcattttattcccattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcagatccggagaccatggatatttcggtgactttaat 7150259  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggt 209  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||  |    |  |||||||| |||||||||||    
T  7150258 tttatcatatatttttgtagtcattatgccgttatatgctattaatttggatgctgtgagtttgttcgcagat---ttgttctttacg-tttttagcggt 7150163  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||| ||||||||||||||||| ||| |||||    
T  7150162 gttgaatgatataatctctcgatttgaatgaatgaata 7150125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 35475360 - 35475128
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| || | |||| ||||||| |||||||||||    
T  35475360 ggtgttcatttgattcatattaaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagattcagaagccatggatattccagtcactttaat 35475262  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||| | | ||||||||| |||||| ||||||  ||| ||| ||||    |||| | |||| ||||||| ||||||||||    
T  35475261 tttatcatatatttttgtaggcataacgtcgttatatgctattaacttggatgttgtgagtatgtt----cgtatattcatcctttacg-tttttagcgg 35475167  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| ||||||| ||| |||||    
T  35475166 tgttgaatgatgtaatctctcaatttgaatgaatgaata 35475128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 3271425 - 3271202
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| |||||| |||||||||||||  ||||||||||||| ||  ||||  |||| |||||||| ||||||||||    
T  3271425 ggtgttcatttgattcatattgaaagatccattatttaatcaaagatttggacgtcaacgttgcagatcaggagaccatggatattccgatcactttaat 3271326  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||  ||||||| ||||||||| |||||| ||||||  | | |||||||||||    ||| |||| ||||||| ||||||||||    
T  3271325 tttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgc----agattcatcctttacg-tttttagcgg 3271231  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  3271230 tgttgaatgatgtaatctctcgatttgaa 3271202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 7886951 - 7886730
Alignment:
Q  20 tgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    |||||||||||||||||||||||||||||||||||||||  || | ||||||||| || ||||||||||| |||||||||||||| || |||||||||||    
T  7886951 tgattcatattaaaagatcgattattcaatcaaagattttggcattaacgttgcagatccggaggtcatggatattccggtcactatagttttatcatat 7886852  T
Q  120 atttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatga 218  Q
     ||||||||| |||||| | |||||||| |||||| ||||||||||| ||||||||| |    ||| ||||| |||||| || ||||||||||| |||||    
T  7886851 -tttttgtaggcattattctgttatatgctattaacttggatactgtgagtttgttcac----agattcatcttttacg-ttcttagcggtgttgaatga 7886758  T
Q  219 tgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||||||| ||||||| ||| |||||    
T  7886757 tgtaatctctc-atttgaatgaatgaata 7886730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 2057861 - 2057724
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | || | |||| |||||||||||||| ||||    
T  2057861 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccagatgccatggatattccggtcactataat 2057762  T
Q  110 tttatcatatatttttgtagacattatgccgttatatg 147  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  2057761 tttatcatatatttttgtaggcattatgtcgttatatg 2057724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 27751982 - 27752214
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||  || |||||||| ||||||||| || | |||||||||||| ||  ||||| |||  |||||||||||||||||||    
T  27751982 ggtgttcatttgattcatattgaat-attgattattcgatcaaagatatgggtgtcaacgttgcagatctggaggccatagatattccggtcactttaat 27752080  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||| || ||||||| |||||| |||||| |||| ||| ||||    |||||| ||||| |||||| ||||||||||    
T  27752081 tttatcatatatttttgtaggcattataccattatatgctattaacttggatgctgtgagtatgtt----cgtagattcatcttttacg-tttttagcgg 27752175  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  27752176 tgttgaatgatgtaatctctcgatttgaatgaatgaata 27752214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 40 - 247
Target Start/End: Original strand, 10649730 - 10649931
Alignment:
Q  40 attattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgcc 139  Q
    |||||||||||||| ||||| |||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10649730 attattcaatcaaatatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatgtttttgtaggcattatgcc 10649829  T
Q  140 gttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcgatttgaac 238  Q
    |||||||| |||||| ||||||  ||| ||  |||||||    ||| ||||| |||||| |||||| ||||||| ||||||||||||||||||||||||     
T  10649830 gttatatggtattaaattggatgttgtgag--tgttcgc----agattcatcatttacg-tttttaacggtgttgaatgatgtaatctctcgatttgaat 10649922  T
Q  239 gaaggaata 247  Q
    ||| |||||    
T  10649923 gaatgaata 10649931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 11768065 - 11768224
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||  ||||  |||||||||||||||||||    
T  11768065 atttaattcatattgaaagatcgattattcaatcaaagatttgagcgtcaatgttgcaaatctggagg-catg--tattatggtcactttaattttatca 11768161  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||| ||||||||||||||||| |||||  ||||||  ||| ||||||||||||    
T  11768162 tatatttttgtagccattatgccgttatatgctattatcttggatgatgtgagtttgttcgca 11768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 26578309 - 26578452
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||| |||||| || |||| |  ||||||||| ||||||||||||||    
T  26578309 gtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaatgttgcagatccggaagcaatgaatatttcggtcactttaatt 26578408  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    | ||||||||||||||||| ||||||||||||||||| ||||||    
T  26578409 tcatcatatatttttgtaggcattatgccgttatatgctattaa 26578452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 30298264 - 30298485
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || ||| ||||||||||||||||||||| |||||||||||||| ||  ||||| |||| ||||||||| |||||||||    
T  30298264 ggtgtttatttgattcatattgaa-gattgattattcaatcaaagatttgggcgtcaacgttgcagatctggaggccatggatattccggccactttaat 30298362  T
Q  110 tttatcatatatttttgtagacattatgccgt--tatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagc 206  Q
    |||||||||||||||||||| |||||||| ||  |||||| |||||| ||||||  ||| ||| |||||||    ||| ||| |||||||| ||||||||    
T  30298363 tttatcatatatttttgtaggcattatgctgttatatatgctattaacttggatgttgtgagtatgttcgc----agattcattctttacg-tttttagc 30298457  T
Q  207 ggtgttaaatgatgtaatctctcgattt 234  Q
    |||||| |||||| || |||||||||||    
T  30298458 ggtgttgaatgatatagtctctcgattt 30298485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 43148789 - 43149016
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||| |||| |||| |||||||||||||||||    |||||||  | ||||||||||| ||  ||||| |||| |||||||||| ||||||||||    
T  43148789 tgttcattttattcctattgaaagatcgattattcaa----agatttggacctcaacgttgcagatctggaggccatggatattccggtgactttaattt 43148884  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||  ||||||||||||    
T  43148885 tatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttac-atttttagcggtg 43148979  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || |||||| ||||||||||||||||| ||| |||||    
T  43148980 ttgaatgatataatctctcgatttgaatgaatgaata 43149016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 43261842 - 43261705
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| | ||||| |||||| || || |||||||| |||||||||||||||||||    
T  43261842 ggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttgggagtcaaagttgcagatccgaaggtcatggatattccggtcactttaat 43261743  T
Q  110 tttatcatatatttttgtagacattatgccgttatatg 147  Q
     ||||||||||||||||||| ||||||| |||||||||    
T  43261742 gttatcatatatttttgtaggcattatgtcgttatatg 43261705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 19280967 - 19280800
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || ||||||  ||| |||||||||| ||||||||     
T  19280967 gtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggctatggatattccggtgactttaata 19280868  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| ||||||||||||    
T  19280867 ttatcatatatttttgtaggcattatg-cgttatatgctattaacttggatgttgtgagtttgttcgca 19280800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 20257718 - 20257496
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||| | || ||||   | ||  ||||||||||||||||||    
T  20257718 ggtgttcatttgattcatattgaagtatcgattattcaatcaaagatttgcgcgtcaacgttgtagatccggaaa-cgtgggtattccggtcactttaat 20257620  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| ||||||||| |    ||| ||||| |||||| |||||||||     
T  20257619 tttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcac----agattcatcatttacg-tttttagcga 20257525  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| |||||| |||||| ||||||||||    
T  20257524 tgttgaatgatataatctatcgatttgaa 20257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 42886535 - 42886678
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcg--gaggtcatgaatattccggtcactttaa 108  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||  || | ||||  ||||||||||| |||||    
T  42886535 gtgttcatttgattcatattaaaagatcgattattcaatcaaagatttga-cgtcaacgttgcagatccgaagacggcatg-gtattccggtcaatttaa 42886632  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||    
T  42886633 ttttataatatatttttgtaggcattatgccgttatatgctattaa 42886678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 15570964 - 15571132
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| || |||| |||||||||||||| | |||  ||| ||||||||| || ||||| |||||  |||||| ||||||||||    
T  15570964 tggtgttcatttgattcatattgaa-gatctattattcaatcaaataattggacgttaacgttgcacatccggag-tcatgtgtattccagtcactttaa 15571061  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| ||||||||||||    
T  15571062 ttttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgca 15571132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 22978946 - 22978778
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||   |||||| ||||||||||||| |||||||| ||||| |||| |||| ||||  |||| |||||||||| ||    
T  22978946 ggtgttcatttgattcatattgaaagaaaaattattaaatcaaagatttgggcgtcaacattgcagattctgagg-catgggtatttcggtcactttcat 22978848  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||| | |||||||||||| ||||||||||||||||| ||||| |||||||  | ||||||| ||||||    
T  22978847 tttataaaatatttttgtagccattatgccgttatatgctattagtttggatgatttaagtttattcgca 22978778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 30298951 - 30299133
Alignment:
Q  61 gcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttgga 160  Q
    |||||||| ||||| ||  ||| | |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  30298951 gcgtcaacattgcagatctggatgccatggatattctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttgga 30299050  T
Q  161 tactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |  | | ||| |||||||    ||| |||| ||||||| |||||||||||||| |||||| |||| ||||||||| || ||| |||||    
T  30299051 tgttctgagtatgttcgc----agattcatcctttacg-tttttagcggtgttgaatgatttaatatctcgatttaaatgaatgaata 30299133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 28235641 - 28235812
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||| | ||||||||||||||||   ||||||| | || | ||  ||||| |||| ||||| || ||||||||||    
T  28235641 ggtgttcattttattcttattgaaagatcaagtattcaatcaaagattcaggcgtcaaagatgtagatctggaggccatggatatttcgatcactttaat 28235740  T
Q  110 tttatcatatatttttgtagacattatgccgt--tatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||| |||||||||||  |||||| |||||| ||||||  ||| ||||||||||||    
T  28235741 tttatcatatatttttgtaggcattatgccgttatatatgctattaacttggatgttgtgagtttgttcgca 28235812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 7613081 - 7612912
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattcc-ggtcactttaa 108  Q
    |||||| |||||||||||||| ||||||||||||||||||  |||||| | | |||||| ||||| || || ||| ||||| ||||   || ||  ||||    
T  7613081 ggtgttcatttgattcatattgaaagatcgattattcaatttaagattggggtgtcaacattgcagatccgaagg-catgagtatttttggccaagttaa 7612983  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||||| ||||||| |||| |||| |||||| ||| ||  ||| ||||||||||||    
T  7612982 ttttatcatatatttttgtaggcattatgtcgttctatgctattaaattgaatgttgtgagtttgttcgca 7612912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 247
Target Start/End: Complemental strand, 43008238 - 43008105
Alignment:
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggt 209  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  | | ||||||||| ||  |  | ||  ||||||| ||||||| |||    
T  43008238 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttatgagtttgttctcaaattta-tc--ctttacg-tttttagtggt 43008143  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  43008142 gttgaatgatgtaatctctcgatttgaatgaatgaata 43008105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 41418669 - 41418608
Alignment:
Q  86 catgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatg 147  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  41418669 catggatattccgctcactttaattttatcatatatttttgtggacattatgtcgttatatg 41418608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 6445951 - 6446036
Alignment:
Q  32 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcata 118  Q
    ||||||||||||||||||||||| |||   |||||||||||||  |||| ||  |||| ||||||||||||||||||||||||||||    
T  6445951 aaagatcgattattcaatcaaaggtttagacgtcaacgttgcagtttcgaaga-catggatattccggtcactttaattttatcata 6446036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 30371782 - 30371851
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattc 79  Q
    |||||| |||| ||||||||| ||||||||||| ||||||||||||||||  ||||||| ||||| ||||    
T  30371782 ggtgttcatttaattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacattgcagattc 30371851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 19100660 - 19100538
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||| |||| |||||  | |||||||||||| ||||||| | |||||||| || || |  | | ||||| |||||| |||||||||||    
T  19100660 ggtgttcatttgattcctattgaaagagtggttattcaatcaatgatttgaacatcaacgttccagat-cttaagacatgagtattccagtcactttaat 19100562  T
Q  110 tttatcatatatttttgtagacatt 134  Q
    |||||||||| | ||||||||||||    
T  19100561 tttatcatat-tatttgtagacatt 19100538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 27576357 - 27576309
Alignment:
Q  26 atattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 74  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||    
T  27576357 atattgaaagatcgattattcaatcaaagatttgggcatcaacgttgca 27576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 6216978 - 6217053
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    |||||||||| |||||| |||||||||||||| ||||||| | ||||  |||| |||| |||| |||||||||||||    
T  6216978 attcaatcaatgatttgggcgtcaacgttgcagattcggaag-catgtgtatttcggtgacttaaattttatcatat 6217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 8772019 - 8771971
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| |||||| |||||||||||||||||||||||| ||| |||||    
T  8772019 tttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaata 8771971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 30371862 - 30371910
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||| |||||||||||||||| ||||||| ||| |||||    
T  30371862 tttttagcggtgtttaatgatgtaatctctctatttgaatgaatgaata 30371910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 36344514 - 36344440
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggagg 84  Q
    |||||| |||||||||||||| ||||||  ||| |||||||||||| ||| |||| ||| ||||| || ||||||    
T  36344514 ggtgttcatttgattcatattgaaagattaatttttcaatcaaagagttgggcgtgaacattgcagatccggagg 36344440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 13468678 - 13468727
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcgga 82  Q
    ||||||| |||||||||||| |||| ||| |||||||||||| |||||||    
T  13468678 aagatcggttattcaatcaatgattcgagtgtcaacgttgcagattcgga 13468727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 19121034 - 19121126
Alignment:
Q  86 catgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||| |||| ||||   ||||||||||| | ||||||||| || |||  || ||||||||||||||||||  ||| ||||||||||||    
T  19121034 catgaatatttcggtgacttaggttttatcatat-tatttgtagacgttttgctcttgtatgatattaatttggatgatgtgagtttgttcgca 19121126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 13007309 - 13007439
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | ||||  |||| |||| |||| | ||||||||||| | ||||||| |||| |||||||    
T  13007309 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgggtatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgtt 13007406  T
Q  143 atatgatattaatttggatactgtaagtttgtt 175  Q
     |||| |||||| |||| | |||| ||||||||    
T  13007407 gtatgctattaacttgggtgctgtgagtttgtt 13007439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 13422013 - 13422147
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||||| |||||| ||||||| |||||| |||| || | ||||  |||| |||| ||||  |||||||||||| | | ||||| |||| | |||||    
T  13422013 attcaatcaatgatttgggcgtcaatgttgcagattctgaag-catgtgtatttcggtgacttatattttatcatat-tatatgtaggcatttttccgtt 13422110  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| ||||||  ||| ||||||||||||    
T  13422111 ttatgctattaacttggatgttgtgagtttgttcgca 13422147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 19280782 - 19280727
Alignment:
Q  191 ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||| ||| |||||    
T  19280782 ctttatgttttt-agcggtgttgaataatgtaatctctcgatttgaatgaatgaata 19280727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 8805923 - 8806157
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  8805923 tggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgcagattcggaggtcatggatattccggtcactttaa 8806022  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||| ||||||  ||| || ||||||||    ||| |||| ||||||| |||||||||    
T  8806023 ttttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgc----agattcatcctttacg-tttttagcg 8806117  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
     |||| |||||||||||||||||||||||| ||| |||||    
T  8806118 atgttgaatgatgtaatctctcgatttgaatgaatgaata 8806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 235
Target Start/End: Complemental strand, 9986365 - 9986144
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  9986365 ggtgttcatttgattcatattgaaagatcgattattcaattaaagatttgggcgtcaacgttgcagattcggaggccatgggtattccggtcactttaat 9986266  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  9986265 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 9986171  T
Q  209 tgttaaatgatgtaatctctcgatttg 235  Q
    |||| ||||||||||||||||||||||    
T  9986170 tgttgaatgatgtaatctctcgatttg 9986144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 84203 - 83971
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||| || |||| |||||| ||||||||| |||||||||    
T  84203 ggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccggatgtcatggatattccggccactttaat 84105  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  84104 tttatcatatattttcgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 84010  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||||||||||| ||| |||||    
T  84009 tgttgaatgatgtaatatctcgatttgaatgaatgaata 83971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 21570430 - 21570198
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||| || |||||| ||||||||||||| ||||||||||    
T  21570430 ggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaatgttgcagatccggaggccatgaatattccgttcactttaat 21570332  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||||||||| |||| |||||| ||| || ||||||||||||||||    ||| |||  ||||| | ||||||||||    
T  21570331 tttatcatatatttttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgc----agattcagcctttatg-tttttagcgg 21570237  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  21570236 tgttgaatgatgtaatctctcgatttgaatgaatgaata 21570198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 7015734 - 7015511
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| || || | | |||| ||||||| ||| |||||||    
T  7015734 ggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattcccgtcgctttaat 7015635  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| ||| || ||||| |||||||| |    
T  7015634 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcattcgttacg-tttttagctg 7015540  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  7015539 tgttgaatgatgtaatctctcgatttgaa 7015511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 20047105 - 20046872
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  | ||||||||||| || |||||| ||||||||||||||| ||||||||    
T  20047105 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacatcaacgttgcagatccggaggccatgaatattccggtgactttaat 20047006  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||  |||||| |||||| |||| | |||||||||    ||| |||| ||||||| ||||||||||    
T  20047005 tttatcatatatttttgtaggcattatgtcgttatatcttattaacttggatgctgtgattttgttcgc----agattcatcctttacg-tttttagcgg 20046911  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  20046910 tgttgaatgatgtaatctctcgatttaaatgaatgaata 20046872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 27249174 - 27248941
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||| || | ||||  ||| |||||||||||||||||||    
T  27249174 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcagcgttgcagatcctgaggcaatggatattccggtcactttaat 27249075  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||  ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  27249074 ttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 27248980  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||| ||||||||||||||||| ||| |||||    
T  27248979 tgttgaatgatataatctctcgatttgaatgaatgaata 27248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 3725237 - 3725461
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || | |||| |||  |||||||| |||||||||    
T  3725237 tggtgttcgtttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgtagatccagaggccatagatattccgatcactttaa 3725336  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    |||| |||||||||||||||| ||||| ||||||||||| ||||| |||||||  ||||||||||||  |    ||| |||| ||||||| ||||||| |    
T  3725337 ttttttcatatatttttgtaggcattacgccgttatatgctattagtttggatgatgtaagtttgtttac----agattcatcctttacg-tttttagtg 3725431  T
Q  208 gtgttaaatgatgtaatctctcgatttgaa 237  Q
    ||||||||||||||||||||||||||||||    
T  3725432 gtgttaaatgatgtaatctctcgatttgaa 3725461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 247
Target Start/End: Original strand, 4192918 - 4193128
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||  |||||||||||||||||||||||||| || |||||| |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  4192918 aagatcgattattccgtcaaagatttgagcgtcaacgttgcagatccggaggccatagatattccggtcactttaattttatcatatatttttgtaggca 4193017  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||||||||||||| |||||| || |||||||| ||| ||||    || ||| |||| ||||||| |||||||||| ||| ||||||||||||||||||    
T  4193018 ttatgccgttatatgctattaacttagatactgtgagtgtgtt----cggagattcatcctttacg-tttttagcggcgttgaatgatgtaatctctcga 4193112  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  4193113 tttgaatgaatgaata 4193128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 2808485 - 2808263
Alignment:
Q  20 tgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||||||| || |||| | |||| |||||||| ||||||||||||||||||||    
T  2808485 tgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgcagatccggaagccatggatattccgatcactttaattttatcatat 2808386  T
Q  120 atttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatga 218  Q
    |||||||||| ||||||||||||||||| |||||| ||||||  ||| || |||||| |    ||| |||| ||||||| ||||||||| |||| |||||    
T  2808385 atttttgtaggcattatgccgttatatgctattaacttggatgatgtgag-ttgttcac----agattcatcctttacg-tttttagcgatgttgaatga 2808292  T
Q  219 tgtaatctctcgatttgaacgaaggaata 247  Q
    |  |||||||||||||||| ||| |||||    
T  2808291 tacaatctctcgatttgaatgaatgaata 2808263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 6173690 - 6173832
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| || |||||| |||| |||||||||| ||||||||    
T  6173690 ggtgttcatttgattcatattgaaagatcgatcattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaat 6173789  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatatt 152  Q
    |||||||||||||||||||| |||||||| |||||||| ||||    
T  6173790 tttatcatatatttttgtaggcattatgcagttatatgctatt 6173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 8971648 - 8971428
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||| | ||||||| ||||| |||| |||||||||   |||||||||||| || | || |||||  |||||||||||||||||||||    
T  8971648 tgttcatttgattcataatgaaagatcaattat-caattaaagatttggatgtcaacgttgcagatccagatgtcattgatattccggtcactttaattt 8971550  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||    | | |||| ||||||  || |||||||||    
T  8971549 tatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----atattcatcctttac-attcttagcggtg 8971455  T
Q  211 ttaaatgatgtaatctctcgatttgaa 237  Q
    || ||||||||||||||||||||||||    
T  8971454 ttgaatgatgtaatctctcgatttgaa 8971428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 32913299 - 32913467
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| || ||||||||||| || ||||||||||||||||||||||||| |||||||||||||| || |||||| |||| ||||| |||||||||||||    
T  32913299 ggtgttcatctgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattacggtcactttaat 32913397  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||  ||||||||||||||||| |||||| ||||||  ||| ||| ||||||||    
T  32913398 tttatcatatatttttgtatgcattatgccgttatatgctattaacttggatgttgtgagtatgttcgca 32913467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 27949486 - 27949717
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||| || |  ||| |||| ||||||| |||||||||||||    
T  27949486 tgttcatttgattcatatcgaaagatcaattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccagtcactttaattt 27949585  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtg 210  Q
    |||||||||||||| ||||||||||| |||| |||| |||||| ||||||  ||| ||||||||    || ||| ||||| |||||| ||||||||||||    
T  27949586 tatcatatatttttatagacattatgacgttgtatgctattaacttggatgttgtgagtttgtt----cggagattcatcatttacg-tttttagcggtg 27949680  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || |||||| |||| ||||||||| || ||| |||||    
T  27949681 ttgaatgatataatatctcgatttaaatgaatgaata 27949717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 37 - 247
Target Start/End: Complemental strand, 38575481 - 38575276
Alignment:
Q  37 tcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattat 136  Q
    |||||| |||||||||||||||| |||||||||||||| || ||||||  ||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  38575481 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattat 38575382  T
Q  137 gccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttg 235  Q
    | ||||||||| |||||  ||||||  ||| |||||||||||    ||| |||| |||||  | ||||||||||||| ||||||||||||||||||||||    
T  38575381 gtcgttatatgctattatcttggatgttgtgagtttgttcgc----agattcatccttta--tgttttagcggtgttgaatgatgtaatctctcgatttg 38575288  T
Q  236 aacgaaggaata 247  Q
    || ||| |||||    
T  38575287 aatgaatgaata 38575276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 25087107 - 25087326
Alignment:
Q  22 attcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatat 121  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||| |||| || | |||| ||||||| ||||||||||| ||||||||||     
T  25087107 attcatattaaaagatcgattattcaatcaatgatttggacgtcaacgttgcagattcagaagccatggatattccagtcactttaatcttatcatata- 25087205  T
Q  122 ttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatg 220  Q
    |||||||| ||||| ||||||||||| |||||| ||||||  ||| ||||||||| |    ||| |||| |||||||  |||||| |||||| |||||||    
T  25087206 ttttgtaggcattaagccgttatatgctattaacttggatgatgtgagtttgttccc----agattcatcctttacg--ttttagtggtgttgaatgatg 25087299  T
Q  221 taatctctcgatttgaacgaaggaata 247  Q
    ||||||||||||||||| ||| |||||    
T  25087300 taatctctcgatttgaatgaatgaata 25087326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 36234066 - 36234289
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  36234066 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 36234165  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||          |||||| ||||||  ||| ||||||||| |    ||| |||| ||||||| ||||||||||    
T  36234166 ttcatcatatatttttgtaggcattatgc----------tattaacttggatgttgtgagtttgttcac----agattcatcctttacg-tttttagcgg 36234250  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  36234251 tgttgaatgatgtaatctctcgatttgaatgaatgaata 36234289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 40659948 - 40659746
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    ||||||||| || | |||||||||||||||||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||||||||| || |    
T  40659948 atttgattcttactgaaagatcgattattcaatcaaagatttgggcgtcaacgttggagatccggaggccatggatattccggtcactttaatttcataa 40659849  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaa 215  Q
    | ||||| ||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| |||||||||||||| ||    
T  40659848 tttatttctgtagccattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcggtgttgaa 40659754  T
Q  216 tgatgtaa 223  Q
    ||||||||    
T  40659753 tgatgtaa 40659746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 247
Target Start/End: Original strand, 4228207 - 4228414
Alignment:
Q  34 agatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa-ttttatcatatatttttgtagaca 132  Q
    |||||||||||||||||||||||||    | |||||||||| || ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||    
T  4228207 agatcgattattcaatcaaagattt---aggcaacgttgcagatccggaggtcatggatattccgatcactttaatttttatcatatatttttgtaggca 4228303  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||  |||||||||||||| ||||||||||||||||||    
T  4228304 ttatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttac-atttttagcggtgttgaatgatgtaatctctcga 4228398  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  4228399 tttgaatgaatgaata 4228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 32679131 - 32678965
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||| |||  |||||||||| ||||||||||    
T  32679131 tgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattt 32679032  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||| ||||||||||||||||| |||||| || |||  ||| ||||||||||||    
T  32679031 tatcatatatttttgtaggcattatgccgttatatgctattaactt-gatgttgtgagtttgttcgca 32678965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 40626072 - 40625857
Alignment:
Q  18 tttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcat 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||| || |||| ||||||||||||||||||||||||  |    
T  40626072 tttgattcatattgaaagatcgattattcaatcaaagatttgatcgtcaacgttgcagatccggcggccatggatattccggtcactttaattttatgtt 40625973  T
Q  118 atatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaat 216  Q
    || ||||||||| ||||||    ||||||| |||||| ||| ||  | | |||||||||||    ||| ||||| |||||| ||||||||| |||| |||    
T  40625972 atgtttttgtaggcattatctttttatatgctattaacttgaatgttatgagtttgttcgc----agattcatcatttacg-tttttagcgatgttgaat 40625878  T
Q  217 gatgtaatctctcgatttgaa 237  Q
    |||||||||||||||||||||    
T  40625877 gatgtaatctctcgatttgaa 40625857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 41431086 - 41431319
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||  ||| ||||||||||||||||||||||||||||   |||||||||||| || | |||  |||| |||||||| | ||||||||    
T  41431086 ggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagatccagagaccatggatattccgatgactttaat 41431185  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||  |||||| ||||||  ||| ||||| |||||    ||| | || ||||||| ||||||||||    
T  41431186 tttatcatatatttttgtaggcattatgccgttatatactattaacttggatgttgtgagtttattcgc----agatttatcctttacg-tttttagcgg 41431280  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||| |||||||||||||||||||| ||| |||||    
T  41431281 tgttgaataatgtaatctctcgatttgaatgaatgaata 41431319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 34600332 - 34600495
Alignment:
Q  70 ttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaag 169  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||  ||    
T  34600332 ttgcagattcggaggccatgaatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgcgag 34600431  T
Q  170 tttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    ||||||| |    ||| |||| ||||||| |||||||||||||| || |||||||||||||||||||||    
T  34600432 tttgttcac----agattcatcctttacg-tttttagcggtgttgaacgatgtaatctctcgatttgaa 34600495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 41712785 - 41712643
Alignment:
Q  36 atcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacatta 135  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  41712785 atcgattattca-tcaaagatttgagcgtcaacgttgcagatacggaggccatgaatattccggtcattttaattttatcatatatttttgtaggtatta 41712687  T
Q  136 tgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||| |||||||| |||||| ||  ||| ||| ||||||||||||    
T  41712686 tgcagttatatgttattaacttatatattgtgagtttgttcgca 41712643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 3269134 - 3269022
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||    
T  3269134 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaat 3269035  T
Q  110 tttatcatatatt 122  Q
    ||||  |||||||    
T  3269034 tttactatatatt 3269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 3269693 - 3269581
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||    
T  3269693 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaat 3269594  T
Q  110 tttatcatatatt 122  Q
    ||||  |||||||    
T  3269593 tttactatatatt 3269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 3270252 - 3270140
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||    
T  3270252 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaat 3270153  T
Q  110 tttatcatatatt 122  Q
    ||||  |||||||    
T  3270152 tttactatatatt 3270140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 45128262 - 45128426
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||| ||| ||||||||||||||||||||  ||| ||||||||| || |||| | |||| |||||||||| ||||||||    
T  45128262 ggtgttcattttattcctattgaaatatcaattattcaatcaaagatttggacgttaacgttgcagatccggaagccatggatattccggtgactttaat 45128361  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgt 174  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||  ||| |||||||    
T  45128362 tttatcatatatttttgtagacattatgttgttatatgctattaatttggatgttgtgagtttgt 45128426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 22421793 - 22422019
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| |||||| ||||||||||| || || |||||       ||||||||||||||||| |    
T  22421793 ggtgttcatttgattcgtattgaaagatcgattattcaatcaatgatttgggcgtcaacgttacagatccggag-------atattccggtcactttagt 22421885  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||||||||||||||||||||| |||||  |||||||  ||||| |||||| |||| ||||||||| |    ||| |||| ||||||| ||||||||||    
T  22421886 tttatcatatatttttgtagacactatgctattatatgcaattaacttggatgctgtgagtttgttcac----agattcatcctttacg-tttttagcgg 22421980  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    | || |||||  ||||||||||||||||| ||| |||||    
T  22421981 tattgaatgacataatctctcgatttgaatgaatgaata 22422019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 33229130 - 33229012
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  33229130 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatttttgtaggcattatgtcgtt 33229031  T
Q  143 atatgatattaatttggat 161  Q
    ||||| |||||| ||||||    
T  33229030 atatgctattaacttggat 33229012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 459297 - 459154
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||||||||| || |||| | |||   |||| | |||| ||||||    
T  459297 ggtgttcatttgattcatattgaaagatcgattatttaatcaaagatttaggcgtcaacgttgcagatccggatg-cataggtatttcagtcattttaat 459199  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  459198 tttatcatatatttttgtagacattatgccattatatgctattaa 459154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 17319379 - 17319547
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaa-gatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    |||||| |||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||| || || | | ||||  |||||||||||||||||    
T  17319379 ggtgttcatttgactcatattgaa-gatcgattattcaatcaaaagatttgagcgtcaacgttgcagatccgaaag-catgggtattccggtcactttaa 17319476  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||| | ||| ||||||| ||||||||| |||||| ||||||   || ||||||||||||    
T  17319477 ttttatcatatatttgtataggcattatgtcgttatatgttattaacttggatgtcgtgagtttgttcgca 17319547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 27477207 - 27477375
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||| || ||||||||||| ||  | ||  |||  ||||| |||||||||||||    
T  27477207 ggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcatcaacgttgcagatcggaagaccatagatatttcggtcactttaat 27477305  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||| |||||| |||||| ||  |||||| ||||||  ||| ||| ||||||||    
T  27477306 tttatcatatatttttgtaggcattataccgttaaatactattaacttggatgttgtgagtatgttcgca 27477375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 37614148 - 37613998
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||| ||||||||||||||| ||||  | |||||||||||| ||  ||||  ||||| ||||||  ||||||||||    
T  37614148 ggtgttcatttgattcatattgaaagattgattattcaatcaaatatttttgtgtcaacgttgcagatcgggaga-catgagtattccaatcactttaat 37614050  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    |||||||||||||||||||  |||||||  |||||||| |||||| ||||||    
T  37614049 tttatcatatatttttgtatgcattatgttgttatatgttattaacttggat 37613998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 30420736 - 30420836
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||| || ||||||  ||| ||||||| |||||||||||    
T  30420736 ggtgttcatttgattcatattgaaagatagattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaat 30420835  T
Q  110 t 110  Q
    |    
T  30420836 t 30420836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 8308235 - 8308342
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| |||||||||||||||||||||||| |||  ||||||||||||| || |||| | ||| | ||||||  ||||||||| |||||||    
T  8308235 atttgattcatattgaaagatcgattattcaatcaaagaattggacgtcaacgttgcagatccggatg-cataactattccaatcactttaactttatca 8308333  T
Q  117 tatattttt 125  Q
    |||||||||    
T  8308334 tatattttt 8308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 34599045 - 34599108
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgc 73  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  34599045 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgc 34599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 26025433 - 26025331
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||| || |||||||| ||||||||||||| ||||| | ||||| |||||| || ||||||  ||||||||||| |||||||||||    
T  26025433 ggtgttcatttgattcatcttgaaagatcggttattcaatcaaaaatttgggtgtcaatgttgcagatccggaggcgatgaatattccagtcactttaat 26025334  T
Q  110 ttt 112  Q
    |||    
T  26025333 ttt 26025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 31580566 - 31580445
Alignment:
Q  122 ttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatg 220  Q
    |||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| ||||| |||||| |||||||||||||  |||||||    
T  31580566 ttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgc----agattcatcatttacg-tttttagcggtgtacaatgatg 31580472  T
Q  221 taatctctcgatttgaacgaaggaata 247  Q
    ||||||||||||||||| ||| |||||    
T  31580471 taatctctcgatttgaatgaatgaata 31580445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 39641874 - 39641766
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||| ||||||||| ||||||| ||||||||||| || ||||| || ||||||||||| || |||||| || || |||| | |||||||| |||||||||    
T  39641874 atttaattcatattgaaagatcaattattcaatccaaaatttgggcatcaacgttgcagatccggagg-cacgagtatttcagtcacttttattttatca 39641776  T
Q  117 tatatttttg 126  Q
    ||||||||||    
T  39641775 tatatttttg 39641766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 30420851 - 30420960
Alignment:
Q  134 tatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcgat 232  Q
    |||||||||||||| |||||| ||||||  ||| ||||||||||||    || ||||| ||||| |||| |||||||||| |||||||||||||||||||    
T  30420851 tatgccgttatatgctattaacttggatgttgtgagtttgttcgca----gattcatcctttacatttt-tagcggtgttgaatgatgtaatctctcgat 30420945  T
Q  233 ttgaacgaaggaata 247  Q
    ||||| ||| |||||    
T  30420946 ttgaatgaatgaata 30420960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 3268749 - 3268625
Alignment:
Q  119 tatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggtgttaaatga 218  Q
    ||||||||||| ||||||||| ||||||| |||||| |||||| |||| |||||||| |||    || || || ||    |||||||||||||| |||||    
T  3268749 tatttttgtaggcattatgcctttatatggtattaacttggatgctgtgagtttgtttgca----gattcgtcatttatatttttagcggtgttgaatga 3268654  T
Q  219 tgtaatctctcgatttgaacgaaggaata 247  Q
    | ||||||||||||||||| ||| |||||    
T  3268653 tataatctctcgatttgaatgaatgaata 3268625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 9374514 - 9374453
Alignment:
Q  86 catgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatg 147  Q
    ||||| |||||| | ||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  9374514 catgagtattccagacactttaattttatcatgtatttttgtaggcattatgtcgttatatg 9374453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 34124521 - 34124566
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatt 57  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  34124521 tgttaatttgattcatatgaaaagatcgattattcaatcaatgatt 34124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 4778844 - 4778978
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | ||||  |||| |||| |||| | ||||||||||| | ||||||| |||| |||||||    
T  4778844 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgggtatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgtt 4778941  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| ||||||||||| | |||| ||||||||||||    
T  4778942 gtatgttattaatttgggtgctgtgagtttgttcgca 4778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 7558695 - 7558743
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  7558695 tttttagtggtgttaaatgatgtaatctctcgatttgaatgaatgaata 7558743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 32197818 - 32197715
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||||||| || || |||| ||||||| ||||| ||||||| |||||| || |||| | ||||  ||||| ||||||| ||||    
T  32197818 ggtgttcatttgattcatattaaaatattgactatttaatcaaatatttgggcgtcaatgttgcagatccggatg-catggttattctggtcactctaat 32197720  T
Q  110 tttat 114  Q
    |||||    
T  32197719 tttat 32197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 44881763 - 44881657
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||||||||||   ||||||||||||  |||||  | | ||| ||||| || |||||  ||||| |||| |||||||||||||||    
T  44881763 tgttcatttgattcatattaaaagattagttattcaatcaataatttgcacattaacattgcagatccggaga-catgagtatttcggtcactttaattt 44881665  T
Q  112 tatcatat 119  Q
    ||||||||    
T  44881664 tatcatat 44881657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 45128435 - 45128473
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  45128435 tttttagcggtgttgaatgatgtaatctctcgatttgaa 45128473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 9374580 - 9374531
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagattt 58  Q
    ||||||| ||||||||||| || ||||| |||||||||||||||||||||    
T  9374580 tggtgttcatttgattcattttgaaagaacgattattcaatcaaagattt 9374531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 13141540 - 13141651
Alignment:
Q  7 tttggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcacttt 106  Q
    |||||| || ||||| ||| |||| ||||||||| ||||| ||||| ||||||  ||||||||||| | |||| || | |||||||||||| | ||||||    
T  13141540 tttggtattcatttggttcctatttaaagatcgactattcgatcaatgatttggacgtcaacgttgtagattctgaag-catgaatattccagccacttt 13141638  T
Q  107 aattttatcatat 119  Q
     | ||||||||||    
T  13141639 tagtttatcatat 13141651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 31580612 - 31580564
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagattt 58  Q
    |||||| |||||||| ||||| |||||||||||||| ||||||||||||    
T  31580612 ggtgttcatttgatttatattgaaagatcgattattaaatcaaagattt 31580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 33228826 - 33228778
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||| |||||| ||||||||||||||||| ||| |||||    
T  33228826 tttttagcggtgttgaatgatataatctctcgatttgaatgaatgaata 33228778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 38293609 - 38293669
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttg 72  Q
    |||| ||||| || |||||||||||| |||| ||||||||| |||| ||||||||||||||    
T  38293609 tgttcatttggtttatattaaaagattgattgttcaatcaatgattcgagcgtcaacgttg 38293669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 19028923 - 19028849
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcata 118  Q
    |||||||||| |||||||||||||||||||||||| | || | |||| ||||| |||| ||||  |||||||||||    
T  19028923 attcaatcaatgatttgagcgtcaacgttgcaaatccagaag-catggatatttcggtaacttagattttatcata 19028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 6174059 - 6174097
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  6174059 tttttagcggtgttgaatgatataatctctcgatttgaa 6174097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 7646588 - 7646703
Alignment:
Q  62 cgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    ||||||||||||| || |||| | ||||| |||| |||| |||| | ||||||||||| | ||||||| |||| ||||||| |||| |||||| |||| |    
T  7646588 cgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggt 7646685  T
Q  162 actgtaagtttgttcgca 179  Q
      ||| ||||||||||||    
T  7646686 gttgtgagtttgttcgca 7646703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 17249078 - 17249022
Alignment:
Q  123 tttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||| ||||||| |||| |||||| |||| | |||| ||||||||||||    
T  17249078 tttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgca 17249022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 21132075 - 21132123
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||| ||||||||||| | |||||||||| ||| |||||    
T  21132075 tttttagcggtgttgaatgatgtaatttttcgatttgaatgaatgaata 21132123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 31788625 - 31788681
Alignment:
Q  123 tttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||| |||| ||||||| |||| |||||| |||||| |||| ||||||||||||    
T  31788625 tttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgca 31788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 4984590 - 4984357
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||||    
T  4984590 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgcagattcggaggtcatggatattccgatcactttaat 4984491  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||||  |||||||| |||||| || |||  |||||||||||||||    ||| |||| ||||||| ||||||||||    
T  4984490 tttatcatatatttttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgc----agattcatcctttacg-tttttagcgg 4984396  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  4984395 tgttgaatgatgtaatctctcgatttgaatgaatgaata 4984357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 7881125 - 7880892
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  7881125 ggtgttcaattgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 7881026  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| | |||||||||    ||| ||| |||||||| ||||||||||    
T  7881025 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgactttgttcgc----agattcattctttacg-tttttagcgg 7880931  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  7880930 tgttgaatgatgtaatctctcgatttgaatgaatgaata 7880892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 12652998 - 12653231
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||  |||||||||| ||||||||||| |||||||    
T  12652998 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcgctttaat 12653097  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||  ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| || |||| ||||||||||    
T  12653098 tttatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctgtacg-tttttagcgg 12653192  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  12653193 tgttgaatgatgtaatctctcgatttaaatgaatgaata 12653231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 33740601 - 33740368
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| || |||||| |||| ||||| |||||||||||||    
T  33740601 ggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgagcgtcaacgttgcagatccggaggccatggatatttcggtcactttaat 33740502  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||| ||||||| ||| |||||||||||    ||| |||| ||||||| |||||||| |    
T  33740501 tttatcatatatttttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgc----agattcatcctttacg-tttttagcag 33740407  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||| ||||| || ||| |||||    
T  33740406 tgttgaatgatgtaatctcttgatttaaatgaatgaata 33740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 7876067 - 7875834
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| | |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||| ||||||||||    
T  7876067 ggtgttcaattgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccgatcactttaat 7875968  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    || ||||||||||||||||| |||||||| |||||||| |||||| |||||| |||| | |||||||||    ||| ||| |||||||| ||||||||||    
T  7875967 ttcatcatatatttttgtaggcattatgcagttatatgctattaacttggatgctgtgactttgttcgc----agattcattctttacg-tttttagcgg 7875873  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  7875872 tgttgaatgatgtaatctctcgatttaaatgaatgaata 7875834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 25064290 - 25064523
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||||  ||| |||| || | |||||||||    
T  25064290 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatatgcccggcactttaat 25064389  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  25064390 ttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 25064484  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  25064485 tgttgaatgatgtaatctctcgatttgaatgaatgaata 25064523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 33110665 - 33110816
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||| |||||||||||||||||||    
T  33110665 ggtgttcatttgattcatattaaaagatcgattattcaatcaaagattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaat 33110764  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||    
T  33110765 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggat 33110816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 8497021 - 8497255
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| || | || |  ||| |||||||||||||||||||    
T  8497021 ggtgttcatttgattcatattgaaagatcgattcttcaatcaaagatttgggcggcaacgttgcagatcctgatgcaatggatattccggtcactttaat 8497120  T
Q  110 tttatcatata-tttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    || |||||||| ||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| |||||||||    
T  8497121 ttcatcatatattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcg 8497215  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||| |||||||||||||||||||||||| ||| |||||    
T  8497216 gtgttgaatgatgtaatctctcgatttgaatgaatgaata 8497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 247
Target Start/End: Complemental strand, 17237286 - 17237076
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||||||||||||||| | |||||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  17237286 aagatcgattattcaatcaaagatttgggtgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 17237187  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||| ||||||||| |||||| ||||||  ||| ||| |||||||    ||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  17237186 ttatgtcgttatatgctattaacttggatgttgtgagtgtgttcgc----agattcatcctttacg-tttttagcggtgttgaatgatgtaatctctcga 17237092  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  17237091 tttgaatgaatgaata 17237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 8028141 - 8027908
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||| || || |||||||| ||||||| |||||||||||    
T  8028141 ggtgttcatttgattcatattaaaagatcggttattcaatcaaagatttgggcgttaacattgcagatccgaaggtcatggatattccagtcactttaat 8028042  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||| || |||  ||| |||||||||||    | | |||| ||||||| ||||||||||    
T  8028041 tttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgc----aaattcatcctttacg-tttttagcgg 8027947  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||| |||||||||||||||||||| ||| |||||    
T  8027946 tgttgaataatgtaatctctcgatttgaatgaatgaata 8027908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 247
Target Start/End: Original strand, 4088536 - 4088747
Alignment:
Q  32 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagac 131  Q
    ||||||||||| |||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||| |    
T  4088536 aaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggc 4088635  T
Q  132 attatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcg 230  Q
    ||||||||||||||||  ||||| |||||| |||| |||||||||||    ||| |||| ||||||| |||||||||||||| |||||  |||||||||     
T  4088636 attatgccgttatatgccattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcggtgttgaatgaaataatctctca 4088730  T
Q  231 atttgaacgaaggaata 247  Q
    ||||||| ||| |||||    
T  4088731 atttgaatgaatgaata 4088747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 10228732 - 10228902
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||| |||  |||| |||||| |||||||||||||||||||||  ||||||||||||| || |||||| |||| |||||||||| |||||||    
T  10228732 tggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaa 10228831  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  10228832 ttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgca 10228902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 23947341 - 23947107
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcacttt-aa 108  Q
    |||||| |||||||||||||| |||||||||| || ||||||| |||||| ||||||| |||||| || |||||| |||| |||||| ||||||||| ||    
T  23947341 ggtgttcatttgattcatattgaaagatcgataatccaatcaacgatttgggcgtcaatgttgcagatccggaggccatggatattctggtcactttaaa 23947242  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||    |||||| |||| ||||||| |||||||||    
T  23947241 ttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt----cgtagattcatcctttacg-tttttagcg 23947147  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    | ||| |||||||||||||||||||||||| ||| |||||    
T  23947146 gcgttgaatgatgtaatctctcgatttgaatgaatgaata 23947107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 35001644 - 35001877
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||| ||||||||||||||||||||  ||||||||||||| || || ||||||||||||||||||| ||||||||    
T  35001644 ggtgttcattttattcctattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcagatccgaaggtcatgaatattccggtgactttaat 35001743  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| | || ||||||| |||||||||     
T  35001744 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattaatcctttacg-tttttagcga 35001838  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||| | |||||||| ||| |||||    
T  35001839 tgttgaatgatgtaatcttttgatttgaatgaatgaata 35001877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 16419212 - 16419435
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| ||| ||||||||||||||||||||||||  ||||||||||||| || ||||||  ||| |||||||||| ||||||||    
T  16419212 ggtgttcattttattcatattgaaaaatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggcaatggatattccggtgactttaat 16419311  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||| |||  |  ||| |||||||||||    ||| ||||| |||||| ||||||||||    
T  16419312 tttatcatatatttttgtaggcattatgccgtcatatgctattaacttgattgttgtgagtttgttcgc----agattcatcttttacg-tttttagcgg 16419406  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| |||||||||||||||| |||||||    
T  16419407 tgttgaatgatgtaatctctcaatttgaa 16419435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 8196430 - 8196197
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||| ||   ||||||||||||||||||||| |||||| |||||||||||| | || |||||| |||| |||||||||||||||||||    
T  8196430 ggtgttcatttgattcttacagaaagatcgattattcaatcaacgatttgggcgtcaacgttgtagatccggaggccatgtatattccggtcactttaat 8196331  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||||  |||||||||||| ||||||| ||||||||| |||||| |||||| |||| ||| |||||||    | | |||| ||||||  ||||||||||    
T  8196330 tttatcgcatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtgtgttcgc----aaattcatcctttac-atttttagcgg 8196236  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  8196235 tgttgaatgatgtaatctctcgatttgaatgaatgaata 8196197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 4468613 - 4468761
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||| ||||| || |||||||||||||||||||||||||  ||||||||||||| || | ||||||||| ||||||||| ||||||||||    
T  4468613 gtgttcatttgatttatattgaaggatcgattattcaatcaaagatttggccgtcaacgttgcagatccagaggtcatggatattccggccactttaatt 4468712  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttgg 159  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  4468713 ttatcatatatttttgtaggcattatgccgttatatgctattaacttgg 4468761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 237
Target Start/End: Complemental strand, 16892816 - 16892616
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    |||||| ||| |||||| ||||||||  |||||||||||||| || ||||||  ||| ||||||||||||||||||||| ||||||||||||||||| ||    
T  16892816 aagatcaattgttcaattaaagatttaggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggca 16892717  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||||||||||||| |||||| ||||||   ||||||||||||||    ||| ||||| |||||| ||||||| |||||| ||||||||||||||||||    
T  16892716 ttatgccgttatatgctattaacttggatgtcgtaagtttgttcgc----agaatcatcatttacg-tttttagtggtgttgaatgatgtaatctctcga 16892622  T
Q  232 tttgaa 237  Q
    ||||||    
T  16892621 tttgaa 16892616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 49 - 247
Target Start/End: Original strand, 17334846 - 17335040
Alignment:
Q  49 tcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatga 148  Q
    ||||||||||| | |||||||||||| || ||||||  ||| ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||     
T  17334846 tcaaagatttgggtgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgc 17334945  T
Q  149 tattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||| ||||||  ||| |||||||||||    ||| ||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  17334946 tattaacttggatgttgtgagtttgttcgc----agattcatcatttacg-tttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaata 17335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 28635144 - 28634903
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggt--------catgaatattccggtc 101  Q
    |||||| |||||||||||||| ||||||  |||||||||||||||||||||||||||| |||||| || ||||||         |||| ||| |||||||    
T  28635144 ggtgttcatttgattcatattgaaagattaattattcaatcaaagatttgagcgtcaatgttgcagatccggaggcatggaagacatggatactccggtc 28635045  T
Q  102 actttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttt 200  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||  ||||| ||||||  ||| ||||||||| |    ||| |||| ||||||| ||    
T  28635044 actttaattttatcatgtatttttgtaggcattatgccgttatatgcgattaacttggatgttgtgagtttgttcac----agattcatcctttacg-tt 28634950  T
Q  201 tttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| |||| |||||||||| || |||||||||| ||| |||||    
T  28634949 tttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaata 28634903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 7027947 - 7028060
Alignment:
Q  40 attattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgcc 139  Q
    ||||||||||||||||||||||||||||| ||| | || |||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  7027947 attattcaatcaaagatttgagcgtcaaccttgtagatccggaggccatagatattccggtcactttaattttatcatatatttttgtaggcattatggc 7028046  T
Q  140 gttatatgatatta 153  Q
    |||||||| |||||    
T  7028047 gttatatgctatta 7028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 12165893 - 12166008
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| |||||| |||||||||||| |||||||| |||||||||||||| || |||| |  ||| |||||||||||||||||||    
T  12165893 ggtgttcatttaattcatattgaaagattgattattcaatcgaagatttgggcgtcaacgttgcagatccggatgctatggatattccggtcactttaat 12165992  T
Q  110 tttatcatatattttt 125  Q
    ||||||||||||||||    
T  12165993 tttatcatatattttt 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 25337624 - 25337789
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||| ||    |||||||||| |||| ||||||||| | |||| |||   |||||| ||||| |||||    
T  25337624 ggtgttcatttgattcatattgaaagatcgattattgaa----agatttgagcatcaaggttgcaaatccagagg-cattggtattccagtcaccttaat 25337718  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcac 180  Q
    |||||||||||||||||||| ||||||   ||||||||||||||| ||| ||  |||||||||||||||||    
T  25337719 tttatcatatatttttgtaggcattatattgttatatgatattaacttgaatggtgtaagtttgttcgcac 25337789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 247
Target Start/End: Complemental strand, 12059720 - 12059563
Alignment:
Q  86 catgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtaga 185  Q
    |||| ||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||| |||||| ||||||  ||| |||||||||||    |||    
T  12059720 catggatattccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----aga 12059625  T
Q  186 ctcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
     |||| ||||||| |||||||||||||| |||||| |||||||| ||||| || ||| |||||    
T  12059624 ttcatcctttacg-tttttagcggtgttgaatgatataatctcttgatttaaatgaatgaata 12059563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 20619597 - 20619663
Alignment:
Q  86 catgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatatt 152  Q
    |||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||| ||||    
T  20619597 catggatattccggtcactttaattttatcatatatttttgtatgaattatgtcgttatatgctatt 20619663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 33543633 - 33543521
Alignment:
Q  22 attcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatat 121  Q
    ||||||||| ||||||||| |||||||||||| ||||| | ||||| |||||| || |||| | ||||  |||||||  || ||||||||||| ||||||    
T  33543633 attcatattgaaagatcgactattcaatcaaaaatttgggtgtcaatgttgcagatccggaag-catgggtattccgacca-tttaattttattatatat 33543536  T
Q  122 ttttgtagacattat 136  Q
    |||||||||||||||    
T  33543535 ttttgtagacattat 33543521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 34489357 - 34489418
Alignment:
Q  92 tattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  34489357 tattccggtcactttaattttatc-tatatttttgtagccattatgtcgttatatgctattaa 34489418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 33053176 - 33053042
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||| ||||||||||||| || |||| | ||||  |||| | || |||| | ||||||||||| | ||||||| |||| |||||||    
T  33053176 attcaaccaatgatttgaacgtcaacgttgcagatccggaag-catgggtatttcagtgacttaagttttatcatat-tatttgtaggcattttgccgtt 33053079  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||||| |||| ||||||||||||    
T  33053078 gtatgctattaacttggatgctgtgagtttgttcgca 33053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 1704147 - 1704065
Alignment:
Q  36 atcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    |||||||||||||| || ||||||| | ||||||||| | || |||| | |||||||||||| |||||||||||| ||||||||    
T  1704147 atcgattattcaataaatgatttgaacatcaacgttgtagatccggatg-catgaatattccagtcactttaattgtatcatat 1704065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 23128700 - 23128834
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||||| ||||||   |||||||||| | || |||| | ||||  |||| |||| |||| | ||||||||||| | ||||||| |||| |||||||    
T  23128700 attcaatcaatgatttggatgtcaacgttgtagatccggaag-catgggtatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgtt 23128797  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| ||||||||||| | |||| ||||||||||||    
T  23128798 gtatgctattaatttgggtgctgtgagtttgttcgca 23128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 4352012 - 4351961
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaac 68  Q
    |||| ||||||||| |||||||||||||| |||||||||||||  |||||||    
T  4352012 atttaattcatattgaaagatcgattatttaatcaaagatttggacgtcaac 4351961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 8519049 - 8519015
Alignment:
Q  102 actttaattttatcatatatttttgtagacattat 136  Q
    ||||||||||||||||||||||||||||| |||||    
T  8519049 actttaattttatcatatatttttgtagatattat 8519015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 7028094 - 7028142
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||| |||||| ||||||||||||||||| ||| |||||    
T  7028094 ttttcagcggtgttgaatgatataatctctcgatttgaatgaatgaata 7028142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 14801987 - 14802043
Alignment:
Q  123 tttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||| |||| ||||||| |||| |||||| |||||| |||| ||||||||||||    
T  14801987 tttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgca 14802043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 21426616 - 21426560
Alignment:
Q  123 tttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||| ||||||| |||| |||||| |||| | |||| ||||||||||||    
T  21426616 tttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgca 21426560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 38706733 - 38706500
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||| || |||||||||||||| |||||| |||| ||||| |||||||||||||    
T  38706733 ggtgttaatttgatttatattgaaagatcgattattcaatcgaagatttgggcatcaacgttgcaaatccggaggccatggatatttcggtcactttaat 38706634  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| ||||| |||||| ||||||||||    
T  38706633 tttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgc----agattcatcttttacg-tttttagcgg 38706539  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  38706538 tgttgaatgatgtaatctctcgatttgaatgaatgaata 38706500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 4643924 - 4644157
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||| ||||||    
T  4643924 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaaagttgcagatccggaggtcatgaatattccggtcaatttaat 4644023  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||| ||||||  ||| || ||||||||    ||| |||| ||||||| |||||||||     
T  4644024 tttatcatatattattgtaggcattatgccgttatatgctattaacttggatgttgtgagcttgttcgc----agattcatcctttacg-tttttagcga 4644118  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  4644119 tgttgaatgatgtaatctctcgatttgaatgaatgaata 4644157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 10389777 - 10389544
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||| |||||||| ||||||||||    
T  10389777 ggtgttcatttgattcatattgaaatatcgattattcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccgatcactttaat 10389678  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||    ||| || |||| ||||| | ||||||||||    
T  10389677 tttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgtt----cgtggattcatcctttatg-tttttagcgg 10389583  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||| ||||||||||||||||||| ||| |||||    
T  10389582 tgttgaatggtgtaatctctcgatttgaatgaatgaata 10389544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 25273949 - 25274182
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| || |||||| |||| |||||||||||||||||||    
T  25273949 ggtgttcatttgattcatattgaaagatcgattattcaatcaaaaatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaat 25274048  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||||| |||||||| |||||| || |||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  25274049 tttatcatatatttttgtaggcattatgctgttatatgctattaacttagatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 25274143  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  25274144 tgttgaatgatgtaatctctcgatttgaatgaatgaata 25274182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 9528898 - 9528667
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||  |||||||||| |||||||||||||||||||||    
T  9528898 tgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcactttaattt 9528799  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    |||||||||||||||||| ||||||| ||||||||| |||||| ||| ||  ||| |||||||||||    ||| |||| ||||||| ||||||||||||    
T  9528798 tatcatatatttttgtaggcattatgtcgttatatgctattaacttgaatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcggtg 9528704  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || |||||||||||||||||||||||| ||| |||||    
T  9528703 ttgaatgatgtaatctctcgatttgaatgaatgaata 9528667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 45228057 - 45227831
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  45228057 atttgatttacattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttatca 45227958  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaa 215  Q
    ||||||||||| | |||||||| |||||||| |||||| ||||||  ||| ||||||||    |||||| |||| ||||||| |||||||||||||| ||    
T  45227957 tatatttttgtgggcattatgcggttatatgttattaacttggatgttgtgagtttgtt----cgtagattcatcctttacg-tttttagcggtgttgaa 45227863  T
Q  216 tgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||||||||||| ||| |||||    
T  45227862 tgatgtaatctctcgatttgaatgaatgaata 45227831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 44947477 - 44947698
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| || || ||| |||| ||||||||||||||||||    
T  44947477 tggtgttcatttgattaatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatggatattccggtcactttaa 44947576  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| |||||||||    
T  44947577 ttttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcg 44947671  T
Q  208 gtgttaaatgatgtaatctctcgattt 234  Q
    ||||| |||||||||||||||||||||    
T  44947672 gtgttgaatgatgtaatctctcgattt 44947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 53616673 - 53616440
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  53616673 ggtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 53616574  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || || |||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  53616573 ttcattatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 53616479  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  53616478 tgttgaatgatgtaatctctcgatttgaatgaatgaata 53616440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 225
Target Start/End: Original strand, 49410289 - 49410500
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||| | |||||||||| |||||||||||    
T  49410289 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccgtgaatattcctgtcactttaat 49410388  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||     || |||| ||||||| ||||||||||    
T  49410389 tttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgc----tgattcatcctttacg-tttttagcgg 49410483  T
Q  209 tgttaaatgatgtaatc 225  Q
    |||| ||||||||||||    
T  49410484 tgttgaatgatgtaatc 49410500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 34024453 - 34024228
Alignment:
Q  18 tttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcat 117  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||| |||| |||||||||||| ||||||||||||||    
T  34024453 tttgattcatattgaaagatcgattattcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccggtcattttaattttatcat 34024354  T
Q  118 atatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaat 216  Q
    |||||||||||  |||||||  |||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| |||||||||||||| |||    
T  34024353 atatttttgtaagcattatgttgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcggtgttgaat 34024259  T
Q  217 gatgtaatctctcgatttgaacgaaggaata 247  Q
    | ||||||||||||||||||| ||| |||||    
T  34024258 ggtgtaatctctcgatttgaatgaatgaata 34024228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 50766535 - 50766302
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  50766535 ggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 50766436  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    || ||||||||||||||||| |||||||| |||||||| |||||| ||| || |||| ||||||||    |||||| ||||| | |||| ||||||||||    
T  50766435 ttcatcatatatttttgtaggcattatgctgttatatgctattaacttgaatgctgtgagtttgtt----cgtagattcatcatctacg-tttttagcgg 50766341  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  50766340 tgttgaatgatgtaatctctcgatttaaatgaatgaata 50766302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 51318051 - 51318284
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    ||||||||||||||||||||| |||||| |||| |||||||||  ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||    
T  51318051 ggtgttaatttgattcatattgaaagattgattgttcaatcaacaatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaat 51318150  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| ||||||||| |    ||| |||| ||||||| |||||||| |    
T  51318151 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcac----agattcatcctttacg-tttttagcag 51318245  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  51318246 tgttgaatgatgtaatctctcgatttaaatgaatgaata 51318284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 177
Target Start/End: Complemental strand, 43154037 - 43153870
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| |||| |||||||||||||||||||    
T  43154037 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttacagatccggaggccatggatattccggtcactttaat 43153938  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcg 177  Q
    |||||||||||||||||||| ||||||||||||||||| | |||| ||||||  ||| ||||||||||    
T  43153937 tttatcatatatttttgtaggcattatgccgttatatgctgttaacttggatgttgtgagtttgttcg 43153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 47417728 - 47417951
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||  ||||||||||    
T  47417728 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccattcactttaat 47417827  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| ||| || |||| ||||||||| |    ||| |||| ||||||| ||||||||||    
T  47417828 ttcatcatatatttttgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttcac----agattcatcctttacg-tttttagcgg 47417922  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  47417923 tgttgaatgatgtaatctctcgatttgaa 47417951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 2115604 - 2115378
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||| ||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| || ||||||  ||| ||||||| ||||||||||||| ||||    
T  2115604 atttaattcatattgaaagatcgattgttcaatcaaaaatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatca 2115505  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaa 215  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||||||| |||||||||||    ||| |||| ||||| | |||||||||||||| ||    
T  2115504 tatatttttgtaggcattatgtcgttatatgctattaacttggatactgtgagtttgttcgc----agattcatcctttatg-tttttagcggtgttgaa 2115410  T
Q  216 tgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||||||||||| ||| |||||    
T  2115409 tgatgtaatctctcgatttgaatgaatgaata 2115378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 1531974 - 1532207
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||| || ||||||| |||||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||| || |||||||||    
T  1531974 ggtgtttatttgattcatgttgaaagatcaattattcaatcaaaaatttgggcgtcaacgttgcagaaccggaggtcatggatattctggacactttaat 1532073  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||| || ||||||||    ||| |||| ||||| | ||||||||||    
T  1532074 tttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagcttgttcgc----agattcatcctttatg-tttttagcgg 1532168  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||| |||||||||||||||||| ||| |||||    
T  1532169 tgttgaatgacgtaatctctcgatttgaatgaatgaata 1532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 9283977 - 9284210
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| ||  |||||  ||||||||| | |||||||||||    
T  9283977 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatctggaggcaatgaatatttcagtcactttaat 9284076  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||   |||||  ||| ||||||||    |||||| ||||| |||||| ||||||||||    
T  9284077 ttcatcatatatttttgtaggcattatgccgttatatgctattatcatggatgttgtgagtttgtt----cgtagattcatcttttacg-tttttagcgg 9284171  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  9284172 tgttgaatgatgtaatctctcgatttgaatgaatgaata 9284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 10359571 - 10359351
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||||||||| || ||||||||||| ||   |||| |||| ||||||| |||||||||     
T  10359571 tggtgttcatttgattcatattgaaagatcgattattcaataaaagatttgggcatcaacgttgcagatcttgagg-catggatattccagtcactttat 10359473  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcgg 208  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    | | ||||||||||| ||||||||||    
T  10359472 ttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgc----aaattcatctttacg-tttttagcgg 10359378  T
Q  209 tgttaaatgatgtaatctctcgatttg 235  Q
    |||| ||||||||||||||||||||||    
T  10359377 tgttgaatgatgtaatctctcgatttg 10359351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 31381695 - 31381578
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  31381695 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgggcgtcaacattgcaaattcggaggtcatgaatactccggtcactttaat 31381596  T
Q  110 tttatcatatatttttgt 127  Q
    ||||||||||||||||||    
T  31381595 tttatcatatatttttgt 31381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 43444459 - 43444691
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| || || ||   |||||||||||||||||||||||    
T  43444459 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatatgggcgtcaacgttgcagatccg-agacaatgaatattccggtcactttaat 43444557  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||||||| || |||| |||||||||||    ||| |||| ||||||| || ||| |||    
T  43444558 ttcatcatatatttttgtaggcattatgccgttatatgctattaatttgaatgctgtgagtttgttcgc----agattcatcctttacg-ttcttaacgg 43444652  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| ||||||| ||| |||||    
T  43444653 tgttgaatgatgtaatctctcaatttgaatgaatgaata 43444691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 20569321 - 20569556
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||  | ||||||||||||||| |  |||  ||| |||||||||||||||||||    
T  20569321 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggtgtcaacgttgcaaatccaaaggcaatggatattccggtcactttaat 20569420  T
Q  110 tttatc--atatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagc 206  Q
    || |||  |||||||||||||| |||||||  |||||||| |||||| ||||||| ||| |||||||||||    ||| |||| ||||||| ||||||||    
T  20569421 ttcatcatatatatttttgtaggcattatgttgttatatgctattaacttggataatgtgagtttgttcgc----agattcatcctttacg-tttttagc 20569515  T
Q  207 ggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||| |||||||||||||||||||||||| ||| |||||    
T  20569516 ggtgttgaatgatgtaatctctcgatttgaatgaatgaata 20569556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 33 - 237
Target Start/End: Complemental strand, 37188595 - 37188395
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||| |||| ||||||| |||||||||||||||||||||| |||||||| ||    
T  37188595 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattcctgtcactttaattttatcatataattttgtaggca 37188496  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggtgttaaatgatgtaatctctcgat 232  Q
    || || | ||||||| |||||| |||||| |||| ||| |||||||    ||| | ||||||    |||||||||||||| |||||||||||||||||||    
T  37188495 ttgtgtcattatatgctattaacttggatgctgtgagtgtgttcgc----agatttatcttttgcgtttttagcggtgttgaatgatgtaatctctcgat 37188400  T
Q  233 ttgaa 237  Q
    |||||    
T  37188399 ttgaa 37188395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 868228 - 868462
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||   || ||||||| | || |||||| |||| |||||||||||||||||||    
T  868228 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttggatgtgaacgttgtagatccggaggccatggatattccggtcactttaat 868327  T
Q  110 tttatcatatattttt-gtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactc-atctttacgttttttagcg 207  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||| ||| ||| ||| | ||||||| |    ||| || | ||||| | |||||||||    
T  868328 tttatcatatatttttggtaggcattatgccgttatatgctattaacttgaatattgtgattttgttcac----agattcaacctttatg-tttttagcg 868422  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||| |||||||||||||| |||||| |||||    
T  868423 gtgttaaatgatataatctctcgatttaaacgaatgaata 868462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 6972877 - 6973042
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||| |||| |||| ||||||||||||||||||||||| |||| |||||||||||||| || |||||| |||| |||||||||| |||||||||    
T  6972877 gtgttcattttattcctattgaaagatcgattattcaatcaaaggtttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaatt 6972976  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    |||||||||||||||||||  |||||||||||||||| |||||| |||||| || | |||||||||    
T  6972977 ttatcatatatttttgtaggtattatgccgttatatgctattaacttggatgctatgagtttgttc 6973042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 35964999 - 35964776
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| || |||||| ||||| |||| | ||||||||||    
T  35964999 tggtgttcatttgattcatattaaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggagg-catgagtatttcagtcactttaa 35964901  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcg 207  Q
    |||||||||||||||||||||  ||||||  |||||||| |||||| ||||||  ||| || ||||||||    | ||||| |||||||| |||||||||    
T  35964900 ttttatcatatatttttgtaggaattatgttgttatatgctattaacttggatgttgtgagattgttcgc----aaactcattctttacg-tttttagcg 35964806  T
Q  208 gtgttaaatgatgtaatctctcgatttgaa 237  Q
    ||||| |||| |||  ||| ||||||||||    
T  35964805 gtgttgaatggtgtcctctatcgatttgaa 35964776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 52097938 - 52097770
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagc-gtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||||| || |||||||||||| ||  ||| | |||| |||||||||||||||||||    
T  52097938 gtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggccgtcaacgttgcagatctggatg-catggatattccggtcactttaat 52097840  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||| ||||||| ||||||| ||||||||| |||||| ||||||  ||| ||||| ||||||    
T  52097839 tttatcatatatctttgtaggcattatgacgttatatggtattaacttggatgttgtgagtttattcgca 52097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 12265519 - 12265760
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggt--------catgaatattccggt 100  Q
    ||||||| | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||         ||||  ||||||  |    
T  12265519 tggtgttcacttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccaat 12265618  T
Q  101 cactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttt 200  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| || |||  ||| ||||||||| |    ||| ||||| ||||| ||    
T  12265619 cactttaattttatcatatatttttttaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcac----agattcatcattacg-tt 12265713  T
Q  201 tttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| |||| |||||||||| || |||||||||| ||| |||||    
T  12265714 tttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaata 12265760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 29965701 - 29965829
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||||||| || ||||||||||| || ||||||| ||| |||||||||||||||||||    
T  29965701 ggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgggcatcaacgttgcagatccggaggtaatggatattccggtcactttaat 29965800  T
Q  110 tttatcatatatttttgtagacattatgc 138  Q
    || ||||||||||||||||| ||||||||    
T  29965801 ttcatcatatatttttgtaggcattatgc 29965829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 247
Target Start/End: Original strand, 56199215 - 56199395
Alignment:
Q  63 gtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggata 162  Q
    |||||||||||| || || | | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||     
T  56199215 gtcaacgttgcagatccgaaagccatgaatattccgatgactttaattttatcatatatttttgtagacattatgccgttacatgctattaacttggatg 56199314  T
Q  163 ctgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||    ||| |||| ||||||| |||||||| ||||| |||||||| ||||||||||||||| ||| |||||    
T  56199315 ctgtgagtttgttcgc----agattcatcctttacg-tttttagcagtgttgaatgatgtgatctctcgatttgaatgaatgaata 56199395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 9645466 - 9645324
Alignment:
Q  91 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat 190  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||| |||||| |||| |||||||||||    ||| ||||    
T  9645466 atattccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcat 9645371  T
Q  191 -ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
     ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9645370 cctttacgtttttt-gcggtgttgaatgatgtaatctctcgatttgaa 9645324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 18138935 - 18138707
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| ||||||||  |||| |||||||||||||||||||| | ||||| |||||||||||||| ||  || || |||   ||||||| |||||| ||||    
T  18138935 gtgttcatttgatttctattgaaagatcgattattcaatcacatatttgggcgtcaacgttgcagatctggggg-cattggtattccgatcacttaaatt 18138837  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggtg 210  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||||||  ||||||| ||||||||||||    
T  18138836 ttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agactc--ctttacg-tttttagcggtg 18138744  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || ||||||||| | | | |||||||| ||| |||||    
T  18138743 ttgaatgatgtactttattgatttgaatgaatgaata 18138707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 49126148 - 49125920
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| ||||||||  |||| |||||||||||||||||||| | ||||| |||||||||||||| ||  || || |||   ||||||| |||||| ||||    
T  49126148 gtgttcatttgatttctattgaaagatcgattattcaatcacatatttgggcgtcaacgttgcagatctggggg-cattggtattccgatcacttaaatt 49126050  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggtg 210  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||||||  ||||||| ||||||||||||    
T  49126049 ttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agactc--ctttacg-tttttagcggtg 49125957  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || ||||||||| | | | |||||||| ||| |||||    
T  49125956 ttgaatgatgtactttattgatttgaatgaatgaata 49125920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 27593848 - 27593686
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||| ||||||||| |||||||||||||||||| ||||||||| | |||||| ||||| ||  ||||  ||||| |||||| |||||||||||||    
T  27593848 tgtttatttaattcatattgaaagatcgattattcaataaaagatttg-gagtcaacattgcagatctggagc-catgagtattcctgtcactttaattt 27593751  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    ||||||||||||||||||  |||||||||||||||| |||||| ||||||  ||| |||||||||    
T  27593750 tatcatatatttttgtaggaattatgccgttatatgctattaacttggatgttgtgagtttgttc 27593686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 32952773 - 32952630
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| |||   |||||||||||||||||||||||||||||| ||||||  | ||||| ||||| |||||||||||| ||||||    
T  32952773 ggtgttcatttaattcatattgaaaatacgattattcaatcaaagatttgagcgtcaatgttgcaggtccggag-tcatggatattccggtcaatttaat 32952675  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  32952674 tttatcttatatttttgtaggcattatgtcgttatatgctattaa 32952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 21090284 - 21090429
Alignment:
Q  86 catgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtaga 185  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||| |||||| ||||||| ||| |||||||| ||    |||    
T  21090284 catgaatattccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgtttgc----aga 21090379  T
Q  186 ctcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttg 235  Q
     |||| ||||||| |||||||||||||| |||||||||||||||| |||||    
T  21090380 ttcatcctttacg-tttttagcggtgttgaatgatgtaatctctcaatttg 21090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 49680611 - 49680747
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| |||||| |||| |||||||||| ||||| |||||||||||||| || |||| |  |||| |||| ||||||||||||||| ||||    
T  49680611 atttgattcatattgaaagatagattgttcaatcaaatatttgggcgtcaacgttgcagatccggatgcaatga-tatttcggtcactttaatttcatca 49680709  T
Q  117 tatatttttgtagacattatgccgttatatgatattaa 154  Q
    ||||||||||||| ||||||| ||||||||| ||||||    
T  49680710 tatatttttgtaggcattatgtcgttatatgttattaa 49680747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 14183868 - 14183994
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||| |  |||||  |||| |||||||||||||||||||    
T  14183868 ggtgttcatttgattcatattgaaagatcgactattcaatcaaagattttggcgtcaacgttgcagaaccggagaccatggatattccggtcactttaat 14183967  T
Q  110 tttatcatatatttttgtagacattatg 137  Q
    ||||||| || ||||||||| |||||||    
T  14183968 tttatcaaat-tttttgtaggcattatg 14183994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 46991153 - 46990921
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||| ||   || | |||   ||| ||| ||||||||||    
T  46991153 ggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggtgtcaacgttgcagatctaga-gacatatgtatcccgatcactttaat 46991055  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| |||| |||| | |||| ||| ||  ||| |||||||||||    ||| ||||| |||||| ||||||| ||    
T  46991054 tttatcatatatttttgtaggcattatgtcgttctatgctgttaacttgaatgttgtgagtttgttcgc----agattcatcatttacg-tttttagtgg 46990960  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
     ||| ||||||||| ||| |||||||||| ||| |||||    
T  46990959 cgttgaatgatgtactctatcgatttgaatgaatgaata 46990921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 3336179 - 3335954
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||| | ||||| || |||||       | |||||| ||| ||||||    
T  3336179 ggtgttcatttgattcatattgaaagattgattattcaatcaaagatttg-gcgtcagcattgcagatccggag-------acattccgatcattttaat 3336088  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||| ||||||| ||||| ||||||||||| || ||| ||| ||  | | |||||||| ||    ||| |||| ||||||| ||||||||||    
T  3336087 tttatcatatatatttgtaggcattacgccgttatatgctaataacttgaatgttttgagtttgtttgc----agattcatcctttacg-tttttagcgg 3335993  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||| ||| | |||||||| ||| |||||    
T  3335992 tgttgaatgatgtactctattgatttgaatgaatgaata 3335954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 23100744 - 23100853
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||| |||||||| ||||| |||||| | || || ||||||  |||| |||||| |||||    
T  23100744 tggtgttcatttgattcatattgaaagatcaattattcaatcaatgatttgagtgtcaaagttgcaga-tccgatgtcatgggtatttcggtcaatttaa 23100842  T
Q  109 ttttatcatat 119  Q
    || ||||||||    
T  23100843 ttgtatcatat 23100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 8009384 - 8009275
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||| ||   |||||| ||||||||||||||| ||||| |||||||||||| | || || ||  |||| |||||||| ||||||||||    
T  8009384 ggtgttcatttgattcttacagaaagattgattattcaatcaaaaatttgggcgtcaacgttgtatatccgaagaccatggatattccgatcactttaat 8009285  T
Q  110 tttatcatat 119  Q
    ||||||||||    
T  8009284 tttatcatat 8009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 35261257 - 35261423
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattca----atcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactt 105  Q
    |||||| |||||||||||||||||||||| | ||||||    |||||||| ||| |  ||||||||||| || |||||  ||||  |||| |||||| ||    
T  35261257 ggtgttcatttgattcatattaaaagatcaactattcattcaatcaaagaattg-gtttcaacgttgcagatccggaga-catgg-tatttcggtcattt 35261353  T
Q  106 taattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgtt 175  Q
    ||||||||||| |||| ||||||||||||||||  ||||||| |||||| ||||||  ||| ||||||||    
T  35261354 taattttatcagatatgtttgtagacattatgcacttatatgctattaacttggatgttgtgagtttgtt 35261423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 31381582 - 31381504
Alignment:
Q  170 tttgttcgcacgtagactcatctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaataag 249  Q
    |||||||||| | ||| |||||||||||||||| |||| |||| |||||||||||||||||||||||| ||| |||||||    
T  31381582 tttgttcgcatgcagattcatctttacgttttt-agcgatgttgaatgatgtaatctctcgatttgaatgaacgaataag 31381504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 1931692 - 1931630
Alignment:
Q  92 tattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  1931692 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaa 1931630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 2624562 - 2624627
Alignment:
Q  10 ggtgttaatttgattcatattaaaagat-cgattattcaatcaaagatttgagcgtcaacgttgca 74  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||    
T  2624562 ggtgtttatttgattcatattgaaagattcgattattcaatcaaagaattgggcgtcaacgttgca 2624627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 43353556 - 43353468
Alignment:
Q  30 taaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |  || | |||| |  ||||||||||||||||||||    
T  43353556 taaaatatcggttattcaatcaatgatttgagcgtcaacgttgcaaattcggatg-aataagtatttcaatcactttaattttatcatat 43353468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 22611284 - 22611418
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | ||||| |||| |||| |||| | ||||||||||| | ||||||| |||| |||||||    
T  22611284 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgagtatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgtt 22611381  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| | |||| ||||||||||||    
T  22611382 gtatggtattaaattgggtgctgtgagtttgttcgca 22611418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 28834238 - 28834164
Alignment:
Q  44 ttcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    ||||||||| ||||| || |||||||||| | || |||||  ||||| ||||||||||||||||||||||||||||    
T  28834238 ttcaatcaacgattttagtgtcaacgttgtagatccggaga-catgactattccggtcactttaattttatcatat 28834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 1008322 - 1008364
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttg 59  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  1008322 atttgattcatattaaaatatcgattattcaatcaatgatttg 1008364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 36184598 - 36184762
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| ||||||||  |||| |||||||| |||||||||||| |||||  | |||||||||| | ||  ||||| ||| ||||||  ||||||||| |    
T  36184598 tggtgttcatttgatttctattgaaagatcggttattcaatcaatgattttggtgtcaacgttgtagatcaggagg-cataaatattatggtcactttga 36184696  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgtt 175  Q
    ||||||||||  | ||| ||| |||| || |||| |||| |||||| ||||||  ||| ||||||||    
T  36184697 ttttatcata-ctatttctaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtt 36184762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 176
Target Start/End: Complemental strand, 36204387 - 36204256
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||||| ||||||  ||||||||||||| || |||| |  | |||||||| ||| | ||  |||||||||||| | |||||||| ||| |||| ||    
T  36204387 attcaatcaatgatttggacgtcaacgttgcagatccggaagaga-gaatattctggtgatttagattttatcatat-tatttgtagatattttgccatt 36204290  T
Q  143 atatgatattaatttggatactgtaagtttgttc 176  Q
    ||||| |||||||||||||  ||| |||||||||    
T  36204289 atatgttattaatttggatgttgtgagtttgttc 36204256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 7273743 - 7273707
Alignment:
Q  104 tttaattttatcatatatttttgtagacattatgccg 140  Q
    |||||||||||||||||||||||||| ||||||||||    
T  7273743 tttaattttatcatatatttttgtaggcattatgccg 7273707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 26123329 - 26123436
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| ||||| ||| |||| ||||||||  | |||||| || || ||| ||||||| ||||||||| |||||| ||||| ||||   ||||||||||||    
T  26123329 gtgttcatttggttcttattgaaagatcggctcttcaatgaatgacttgtgcgtcaatgttgcaaatccggagg-catgagtattattgtcactttaatt 26123427  T
Q  111 ttatcatat 119  Q
    |||||||||    
T  26123428 ttatcatat 26123436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 9645570 - 9645479
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcac 103  Q
    |||| |||||||||||||| | ||||   | ||||||| ||||||||| |||||||| ||||| || ||||||  ||| |||||||||||||    
T  9645570 tgttcatttgattcatattgagagataagtaattcaataaaagatttgggcgtcaacattgcagatccggaggcgatggatattccggtcac 9645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 9048765 - 9048799
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaat 77  Q
    |||||||||| ||||||||||||||||||||||||    
T  9048765 attcaatcaatgatttgagcgtcaacgttgcaaat 9048799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 56194667 - 56194716
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttg 59  Q
    |||||| |||| |||| |||| |||||||||||||| |||||||||||||    
T  56194667 ggtgttcattttattcctattgaaagatcgattatttaatcaaagatttg 56194716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 19853520 - 19853386
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | |||| ||||| |||| |||| | ||||||||||| | ||| ||| |||| |||||||    
T  19853520 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat-tatttctaggcattttgccgtt 19853423  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| |  ||| ||||||||||||    
T  19853422 gtatgctattaacttgggtgttgtgagtttgttcgca 19853386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 49680774 - 49680829
Alignment:
Q  191 ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||||||| |||||||||| |||||||||| |||||||||| || ||| |||||    
T  49680774 ctttacgtttt-tagcggtgttgaatgatgtaacctctcgatttaaatgaatgaata 49680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 23085575 - 23085798
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||  ||||  |||| |||||||||| ||||||||    
T  23085575 ggtgttcattttattcatattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgcagatctggagaccatggatattccggtgactttaat 23085674  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  23085675 tttatcatatatttttgtaggcattatgtcgttatatgctattaatttggatactgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 23085769  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  23085770 tgttgaatgatgtaatctctcgatttgaa 23085798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 46822069 - 46822292
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||  |||||||||||| ||||||||||    
T  46822069 ggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccgatcactttaat 46822168  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||| ||    
T  46822169 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagtgg 46822263  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  46822264 tgttgaatgatgtaatctctcgatttgaa 46822292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 32684722 - 32684955
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| || ||  ||||| |||| ||||||||||||||||| |    
T  32684722 ggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttacagatctggaggccatggatattccggtcactttagt 32684821  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||    |||||| |||| ||||||| ||||||||||    
T  32684822 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgtt----cgtagattcatcctttacg-tttttagcgg 32684916  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||| |||||||||||||| ||| |||||    
T  32684917 tgttgaatgatgtagtctctcgatttgaatgaatgaata 32684955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 433713 - 433481
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||| ||||||||| || |||||| ||||||||||||||| |||||||||    
T  433713 gtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgttaacgttgcagatccggaggccatgaatattccggtgactttaatt 433614  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| |||||||||||    
T  433613 ttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcggt 433519  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  433518 gttgaatgatgtaatctctcgatttgaatgaatgaata 433481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 26492421 - 26492652
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| || |||| | | || |||||||||||||||||||||    
T  26492421 tgttcatttgattcatattgaaaggtcgattattcaatcaaagatttgggcgtcaacgttgcagatccggatgccttggatattccggtcactttaattt 26492520  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtg 210  Q
    |||||||||||||||||| |||||||  |||||||| |||||| |||||| |||| ||||||||| |    ||| ||||| |||||| ||||||||||||    
T  26492521 tatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcac----agattcatcttttacg-tttttagcggtg 26492615  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || |||||||||||||||||||||||| ||| |||||    
T  26492616 ttgaatgatgtaatctctcgatttgaatgaatgaata 26492652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 35496198 - 35495975
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| || |||||| |||| ||||| |||||||||||||    
T  35496198 ggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatatttcggtcactttaat 35496099  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||    |||||| |||| | ||||| ||||||||||    
T  35496098 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgtt----cgtagattcatcccttacg-tttttagcgg 35496004  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  35496003 tgttgaatgatgtaatctctcgatttgaa 35495975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 42311336 - 42311555
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  42311336 tgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgcagatccggaggtcatggatattccggtcactttaattt 42311435  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    |||||||||||||||||  ||||||||||||||||| |||||| |||||| |||  |||||||||||    | | |||| ||||||| ||| |||| |||    
T  42311436 tatcatatatttttgtacgcattatgccgttatatgctattaacttggatgctg--agtttgttcgc----aaattcatcctttacg-tttctagcagtg 42311528  T
Q  211 ttaaatgatgtaatctctcgatttgaa 237  Q
    || ||| ||||||||||||||||||||    
T  42311529 ttgaataatgtaatctctcgatttgaa 42311555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 22927893 - 22927670
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||| |||| |||||||||| ||||||||    
T  22927893 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaat 22927794  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| ||| || |||| | |||| |||||||||||    | | |||| ||||||  ||||||||||    
T  22927793 tttatcatatatttttgtaggcattatgccgttatatgctatcaacttggttgctgtgagtttgttcgc----aaattcatcctttac-atttttagcgg 22927699  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||||||||||||||||    
T  22927698 tgttgaatgatgtaatctctcgatttgaa 22927670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 2843264 - 2843031
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| || ||||||  ||| |||||||||||||||||||    
T  2843264 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaatgttgcagatccggaggcaatggatattccggtcactttaat 2843165  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||| ||||||||| |||||  || ||| |||| ||||||||| |    | | |||| ||||||| ||||||||||    
T  2843164 ttcatcatatatttttgtaggcattatgtcgttatatgctattagcttagatgctgtgagtttgttcac----atattcatcctttacg-tttttagcgg 2843070  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| ||||||| ||| |||||    
T  2843069 tgttgaatgatgtaatctctcaatttgaatgaatgaata 2843031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 21266445 - 21266679
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| || ||||||||||| || |||||||||||||||||||||||||||| ||||||||||| || |||||| |||||||||| |||| |||||| |    
T  21266445 ggtgttcatctgattcatattgaa-gatcgattattcaatcaaagatttgagcatcaacgttgcagatccggaggccatgaatatttcggtgactttagt 21266543  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| ||||||||| |    ||| ||||| |||||| ||||||||||    
T  21266544 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcac----agattcatcatttacg-tttttagcgg 21266638  T
Q  209 tgttaaatgatgtaa--tctctcgatttgaacgaaggaata 247  Q
    |||| |||| |||||  |||||||||||||| ||| |||||    
T  21266639 tgttgaatggtgtaatctctctcgatttgaatgaatgaata 21266679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 26583770 - 26583997
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||| ||||||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26583770 tgttcatttgattcatattgaaagatcgattattcaatcaaaga-----gcgtcaacgttgcagattcggaggtcatgaatattccggtcactttaattt 26583864  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaa-tttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    |||||||||||||||||| ||||||| ||||||||| |||||| |||| || |||| || || |||||    ||| |||| ||||||| |||||| || |    
T  26583865 tatcatatatttttgtaggcattatgtcgttatatgctattaactttgaatgctgtgagcttattcgc----agattcatcctttacg-tttttaacgat 26583959  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||| ||||||||| ||| |||||    
T  26583960 gttgaatgatgtaatctcacgatttgaatgaatgaata 26583997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 35261353 - 35261584
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||   |||||| |||||| || |||||| ||||  |||||||||||||||||||    
T  35261353 gtgttcatttgattcatattaaaagatcgattattcaatcaaagatttagacgtcaatgttgcagatccggagg-catgtgtattccggtcactttaatt 35261451  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    ||||||||||||||||||| |||||||||||| |||| |||||| ||||||| ||| |||||||||||    ||| |||| ||||| | ||||||| |||    
T  35261452 ttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgc----agattcatcctttatg-tttttagtggt 35261546  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||||||||| ||| || ||||||| ||| |||||    
T  35261547 gttaaatgatgtactctatcaatttgaatgaatgaata 35261584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 35667255 - 35667104
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| ||||||||| |||| |||||||||||||||||||    
T  35667255 ggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgagcgtcaatgttgcagattcggaggccatggatattccggtcactttaat 35667156  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    |||||||||||||||||||  |||||||  ||||||||||||||| ||||||    
T  35667155 tttatcatatatttttgtatgcattatgttgttatatgatattaacttggat 35667104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 42067084 - 42066852
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| || |||| | ||||||||||||||||||||||||    
T  42067084 ggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaagccatgaatattccggtcactttaat 42066986  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggt 209  Q
    |||||||||||||||||||| ||| | |||| ||| || |||||| ||||||  ||| ||| ||||||||  |    |  |||||||| |||||||||||    
T  42066985 tttatcatatatttttgtaggcataacgccgatatgtgctattaacttggatgttgtgagtatgttcgcatat---ttattctttacg-tttttagcggt 42066890  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  42066889 gttgaatgatgtaatctctcgatttgaatgaatgaata 42066852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 14627902 - 14627777
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  14627902 ggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagattcggaggccatgaatattccagtcactttaat 14627803  T
Q  110 tttatcatatatttttgtagacatta 135  Q
    |||||||||||||||||||| |||||    
T  14627802 tttatcatatatttttgtaggcatta 14627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 34773765 - 34773998
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||| || ||||||  ||| ||||||| |||||||||||    
T  34773765 ggtgttcatttgattcatattgaaagatcgatcgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaat 34773864  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||  ||||||||  |||||| |||||| |||| |||||||| ||    ||| | || ||||||| ||||||||||    
T  34773865 ttcatcatatatttttgtaggcattatatcgttatatactattaacttggatgctgtgagtttgtttgc----agatttatcctttacg-tttttagcgg 34773959  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  34773960 tgttgaatgatgtaatctctcgatttgaatgaatgaata 34773998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 7640776 - 7640565
Alignment:
Q  32 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagac 131  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||  ||| |||||| |||||| |||||||||||||| ||||||||||||| ||| |    
T  7640776 aaagatcgattattcaatcaaatatttgggcgtcaacattgcaaatctggatgtcatggatattctggtcactttaatttcatcatatatttttataggc 7640677  T
Q  132 attatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcg 230  Q
    |||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| ||||| |||||| |||||||||||||| |||||||||||||||||    
T  7640676 attatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcatttacg-tttttagcggtgttgaatgatgtaatctctcg 7640582  T
Q  231 atttgaacgaaggaata 247  Q
    ||||||| ||| |||||    
T  7640581 atttgaatgaatgaata 7640565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 176
Target Start/End: Original strand, 6558931 - 6559097
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||    
T  6558931 ggtgttcatttgattcattttgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaat 6559030  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    ||||||||||||||||| |  ||||||| ||||||||| |||||| |||||| || | |||||||||    
T  6559031 tttatcatatatttttgcaagcattatgtcgttatatgctattaacttggatgctatgagtttgttc 6559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 247
Target Start/End: Complemental strand, 45199033 - 45198823
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||| ||||||||||||||||||| |||||||||||||| || |||||| |||| |||||||||||||||| ||||||||||||||||||||||  |    
T  45199033 aagatcggttattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttgattttatcatatatttttgtaggta 45198934  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||| ||||||||  |||||| ||||||  ||| ||| |||||||    ||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  45198933 ttatgtcgttatatactattaacttggatgttgtgagtatgttcgc----agattcatcctttacg-tttttagcggtgttgaatgatgtaatctctcga 45198839  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  45198838 tttgaatgaatgaata 45198823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 17223022 - 17222801
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||   |||||||||||| ||| | ||| |||| |||||| |||||||||||||    
T  17223022 gtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagatttgaaggccatggatattctggtcactttaatt 17222923  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggtg 210  Q
    ||||||||||||||||||| ||||||||||||||||| || ||| ||||||  ||| |||||||||||    ||| ||||| ||    ||||||||||||    
T  17222922 ttatcatatatttttgtaggcattatgccgttatatgctagtaacttggatgttgtgagtttgttcgc----agattcatcctttatatttttagcggtg 17222827  T
Q  211 ttaaatgatgtaatctctcgatttgaa 237  Q
    ||||||||| | ||||| |||||||||    
T  17222826 ttaaatgatat-atctcccgatttgaa 17222801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 20116636 - 20116868
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||  |||| |||||||||||||| |  | ||||||||  |||||||||||||||||||    
T  20116636 ggtgttcatttgattcatattgaaagatcgattattcaatcaaaactttgggcgtcaacgttgcagacccagaggtcatagatattccggtcactttaat 20116735  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    ||||||| |||||||||||| ||||||| || |||||| |||||| ||||||  ||| ||||||||| |    ||| ||||| |||||| ||||||||||    
T  20116736 tttatcaaatatttttgtaggcattatgtcg-tatatgctattaacttggatgttgtgagtttgttcac----agattcatcatttacg-tttttagcgg 20116829  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||  |||||||||||||||||||||||| ||| |||||    
T  20116830 tgtggaatgatgtaatctctcgatttgaatgaatgaata 20116868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 23786629 - 23786862
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| || || | ||||||||| ||||||| |||||||||||    
T  23786629 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttaaacgtcaacgttccagatcccgaggtcatggatattcctgtcactttaat 23786728  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||  |||||||  |||||||| ||| || || ||| |||| |||||||||||    ||| ||||| |||||| |||||||| |    
T  23786729 tttatcatatatttttgtatgcattatgttgttatatgctatcaacttagatgctgtgagtttgttcgc----agattcatcatttacg-tttttagctg 23786823  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| | ||||| ||| |||||    
T  23786824 tgttgaatgatgtaatctctctaattgaatgaatgaata 23786862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 19560053 - 19560196
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||  ||||||| ||||| || |||||  |||||||||||||||||||||||||    
T  19560053 gtgttcatttgattcatattgaaagattgattattcaatcaaagatttggacgtcaaccttgcagatccggagaccatgaatattccggtcactttaatt 19560152  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  19560153 ttatcatatatttttgtacacattatgccgttatatgctattaa 19560196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 46339108 - 46339341
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||| ||||| |||  ||| |||||||||||||||||||    
T  46339108 ggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgggcgtcaacgttgcagattcgaaggcaatggatattccggtcactttaat 46339207  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || |||||||||||||| |  ||||||| ||||||||| |||||| ||||||  ||| ||||||||| |    ||| |||| ||||||| |||||| | |    
T  46339208 ttcatcatatatttttgcatgcattatgtcgttatatgttattaacttggatgatgtgagtttgttcac----agattcatcctttacg-tttttaacag 46339302  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||| |||||||| ||| |||||    
T  46339303 tgttgaatgatgtaatctcttgatttgaatgaaagaata 46339341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 1448853 - 1448622
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||| || ||||    ||| |||||||| ||||||||||    
T  1448853 ggtgttcatttgattcatattgaaagatccattattcaatcaaagatttggatgtcaacgttgcagatccggaccctatggatattccgatcactttaat 1448754  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggt 209  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  |||  ||||||||||    ||| ||||| ||  | |||| ||||||    
T  1448753 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgt--gtttgttcgc----agattcatcctttaggttttcagcggt 1448660  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||| |||| |||||||||||| ||| |||||    
T  1448659 gttgaatgatataatatctcgatttgaatgaatgaata 1448622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 247
Target Start/End: Complemental strand, 1485254 - 1485046
Alignment:
Q  36 atcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa-ttttatcatatatttttgtagacatt 134  Q
    ||||||||||||||||||||||||  ||||||| ||||| || |||||| |||| |||||||||| ||||||| |||| |||||||||||||||| ||||    
T  1485254 atcgattattcaatcaaagatttggacgtcaacattgcagatccggaggccatggatattccggtgactttaatttttttcatatatttttgtaggcatt 1485155  T
Q  135 atgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatt 233  Q
    ||||| ||||||| |||||| ||||||  |||||  ||||||||    ||| |||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  1485154 atgcccttatatgctattaacttggatgttgtaaacttgttcgc----agattcatcctttacg-tttttagcggtgttgaatgatgtaatctctcgatt 1485060  T
Q  234 tgaacgaaggaata 247  Q
    |||| ||| |||||    
T  1485059 tgaatgaatgaata 1485046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 13592508 - 13592363
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||| | ||||  ||||| |||||||||||||||||||||||||||||||| ||    
T  13592508 aagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggatg-catgggtattctggtcactttaattttatcatatatttttgtaggca 13592410  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||| ||||||||| |||||| || ||| |||| ||||||||||||    
T  13592409 ttatgtcgttatatgctattaacttcgatgctgtgagtttgttcgca 13592363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 48207955 - 48208096
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||| || || |||| ||||| |||||||||||||| |||||||||||||| || |||||| |||| |||||||||||||||||||    
T  48207955 ggtgttcatttgattcattttgaa-gatccattatacaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaat 48208053  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatatt 152  Q
    |||||||||||||||||| | ||||||||||||||||| ||||    
T  48208054 tttatcatatatttttgttggcattatgccgttatatgctatt 48208096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 31235815 - 31235641
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggt--------catgaatattccggtc 101  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||  |||||||||||||||||||||| ||||||         ||||  ||||||| ||    
T  31235815 ggtgttcatttgattcatattgaaagatcaattattcaatcaaatctttgagcgtcaacgttgcaaatccggaggcatggaagacatgggtattccgatc 31235716  T
Q  102 actttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||    
T  31235715 actttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttc 31235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 247
Target Start/End: Complemental strand, 23425373 - 23425163
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||| || |||||||||| || |||| |||||| || |||||| |||| ||||||  ||||||||| ||||||||||||||||||||| ||    
T  23425373 aagatcgattattaaaacaaagatttgggcatcaatgttgcagatccggaggccatggatattctagtcactttacttttatcatatatttttgtaggca 23425274  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    ||||||||||||||| |||||| |||||| |||| ||| ||||    | |||| ||||| |||||| ||||||||| |||| ||| |||||||||||  |    
T  23425273 ttatgccgttatatgttattaacttggatgctgttagtatgtt----catagattcatcatttacg-tttttagcgatgttgaataatgtaatctcttaa 23425179  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  23425178 tttgaatgaatgaata 23425163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 46818439 - 46818272
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||||||||||||||| |||| ||||||| ||| ||| |||||||||| || | ||| |||||  ||||||| ||||||||||    
T  46818439 ggtgttcatttaattcatattaaaagatcgattgttcagtcaaagaattg-gcg-caacgttgcagatccagag-tcatgtgtattccgttcactttaat 46818343  T
Q  110 tttatcatatatttttgta-gacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||| ||||||  ||| ||||||||||||    
T  46818342 tttatcatatatttttgtacgacattatgtcgttatatgctattaacttggatgttgtgagtttgttcgca 46818272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 6002075 - 6002217
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggt--------catgaatattccggtc 101  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || || ||||        ||||| ||||||||||    
T  6002075 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccgaaggtatggaagacatgagtattccggtc 6002174  T
Q  102 actttaattttatcatatatttttgtagacattatgccgttat 144  Q
    || ||||||||||||| ||||||||||| ||||||||| ||||    
T  6002175 accttaattttatcatgtatttttgtaggcattatgccattat 6002217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 32521951 - 32521786
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||||||  || |||| |||||   | ||| |  ||||| |||||| | |||||| |    
T  32521951 tggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttaggcatcaatgttgctgttccgggg--catgagtattccagacactttta 32521854  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||    
T  32521853 ttttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgttgtgagtttgttc 32521786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 42408423 - 42408527
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || || | | |||| |||||||| |||||||||||||||||    
T  42408423 atttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattccgatcactttaattttatca 42408522  T
Q  117 tatat 121  Q
    |||||    
T  42408523 tatat 42408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 20083414 - 20083561
Alignment:
Q  32 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatg--aatattccggtcactttaattttatcatatatttttgtag 129  Q
    ||||||||||| |||||||||||||||| |||||||||||||| || |||||  ||||  | |||||||||||||||| |||||||||||||||||||||    
T  20083414 aaagatcgatt-ttcaatcaaagatttgggcgtcaacgttgcatatccggaga-catgtgagtattccggtcactttagttttatcatatatttttgtag 20083511  T
Q  130 acattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
     ||||||| ||||||| | |||||| || |||  | | ||||||||||||    
T  20083512 gcattatgtcgttatacgctattaactttgatgttattagtttgttcgca 20083561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 17499622 - 17499560
Alignment:
Q  92 tattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  17499622 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaa 17499560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 17553592 - 17553654
Alignment:
Q  92 tattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  17553592 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaa 17553654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 17611180 - 17611234
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtc 65  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17611180 gtgttcatttgattcatattgaaagattgattattcaatcaaagatttgagcgtc 17611234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 43369788 - 43369632
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    ||||| ||| |||| ||||||||  ||||||||||| | |||   | ||||||||||| || |||| | ||||| |||||  ||||||||||||||||||    
T  43369788 atttggttcctattgaaagatcggctattcaatcaatggttttgtcatcaacgttgcagatccggatg-catgagtattctagtcactttaattttatca 43369690  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgtt 175  Q
    ||| | ||| ||| |||| ||||||| ||||||||||| ||| ||  ||||||||||||    
T  43369689 tat-tatttataggcattttgccgttgtatgatattaacttgtatgatgtaagtttgtt 43369632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 34899615 - 34899481
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||||||||||| | ||||  |||| |||| |||| | ||||||||||| | ||||||  |||| |||||||    
T  34899615 attcaaccaatgatttggacgtcaacgttgcaaattcggaag-catgggtatttcggtgacttaagttttatcatat-tatttgtatgcattttgccgtt 34899518  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| ||||||  ||| ||||||||||||    
T  34899517 gtatgctattaacttggatgttgtgagtttgttcgca 34899481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 14627735 - 14627688
Alignment:
Q  200 ttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  14627735 ttttagcggtgtcaaatgatgtaatctctcgatttgaatgaatgaata 14627688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 28407861 - 28407792
Alignment:
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||| | |||||||||||| ||||||| |||| |||||| |||||| |||| ||||||||||||    
T  28407861 ttttatcatat-tatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgca 28407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 46244293 - 46244185
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| ||||| ||| |||| ||| |||| ||||||| |||| |||||||||||||||||||||  ||| || | |||  |||||  |||||||||||    
T  46244293 tggtgttcatttggttcctattgaaaaatcggttattca-tcaatgatttgagcgtcaacgttgcaggttc-gaagacattgatattttggtcactttaa 46244196  T
Q  109 ttttatcatat 119  Q
    |||||||||||    
T  46244195 ttttatcatat 46244185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 8001554 - 8001420
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| |||||||  |||||| |||| |||| ||||   ||||||||||| | ||| ||| |||| |||||||    
T  8001554 attcaagcaatgatttggacgtcaacgttgcagattcggaa-tcatgagtatttcggtgacttaggttttatcatat-tatttataggcattttgccgtt 8001457  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| | |||| ||||||||||||    
T  8001456 gtatgctattaacttgggtgctgtgagtttgttcgca 8001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 17611245 - 17611289
Alignment:
Q  92 tattccggtcactttaattttatcatatatttttgtagacattat 136  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||    
T  17611245 tatttcggtcattttaattttatcatatatttttgtaggcattat 17611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 19296953 - 19297087
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | ||||  |||| |||| |||| | ||||||||||| | ||||||| |||| ||| |||    
T  19296953 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgggtatttcggtaacttaagttttatcatat-tatttgtaggcattttgctgtt 19297050  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||| ||||||||||| |  ||| ||||||||||||    
T  19297051 atatgctattaatttgggtgttgtgagtttgttcgca 19297087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 13796935 - 13796803
Alignment:
Q  45 tcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttat 144  Q
    |||| ||| ||||||| ||||||||||||| || |||| | ||||| ||||  ||| |||| | ||||||||||| | ||||||| |||| || |||| |    
T  13796935 tcaaccaatgatttgaccgtcaacgttgcagatccggaag-catgagtatttaggtgacttaagttttatcatat-tatttgtaggcattttgtcgttgt 13796838  T
Q  145 atgatattaatttggatactgtaagtttgttcgca 179  Q
    ||| |||||| ||||||  ||| ||||||||||||    
T  13796837 atgctattaacttggatgttgtgagtttgttcgca 13796803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 19404765 - 19404631
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||||| |||||| ||||||| |||||| || |||| | ||||| |||| | || ||||  |||||||||||| | ||||||| | || |||||||    
T  19404765 attcaatcaatgatttgggcgtcaatgttgcagatccggaag-catgagtatttcagtgacttagattttatcatat-tatttgtaggctttttgccgtt 19404668  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
      | | |||||| |||||| |||| ||||||||||||    
T  19404667 gcacgctattaacttggatgctgtgagtttgttcgca 19404631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 25162487 - 25162720
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||| ||| |||||||||||||||||||    
T  25162487 ggtgttcatttgtttcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtaatggatattccggtcactttaat 25162586  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| |||||||||||     || |||| ||||||| ||||||||||    
T  25162587 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----ggattcatcctttacg-tttttagcgg 25162681  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  25162682 tgttgaatgatgtaatctctcgatttgaatgaatgaata 25162720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 25631549 - 25631316
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| | || |||| | |||| |||||||||||||||||||    
T  25631549 ggtgttcatttgatttatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgtagatccggatgccatggatattccggtcactttaat 25631450  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||  ||||||||||    
T  25631449 tttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgc----agattcatcctttac-atttttagcgg 25631355  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  25631354 tgttgaatgatgtaatctctcgatttgaatgaatgaata 25631316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 3848942 - 3848709
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||| |||  |||||||||| ||||||||    
T  3848942 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaat 3848843  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||| ||||||| |||||||||| |||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  3848842 tttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 3848748  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  3848747 tgttgaatgatgtaatctctcgatttgaatgaatgaata 3848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 12116149 - 12116382
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||||  ||| ||||||  |||||||||||    
T  12116149 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatattctagtcactttaat 12116248  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||    | |||| |||| ||||||| |||||||||     
T  12116249 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt----cttagattcatcctttacg-tttttagcga 12116343  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  12116344 tgttgaatgatgtaatctctcgatttgaatgaatgaata 12116382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 32607520 - 32607753
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||| || ||||||  |||||||||||| ||||||||||    
T  32607520 ggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccgatcactttaat 32607619  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||| ||||||| ||||||  |||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  32607620 ttcatcatatatttttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 32607714  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  32607715 tgttgaatgatgtaatctctcgatttgaatgaatgaata 32607753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 177
Target Start/End: Original strand, 42719568 - 42719735
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| |   |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  42719568 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagattcggaggtcaacgttgcagattcggaggtcgtgaatattccggtcactttaat 42719667  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcg 177  Q
    |||||||||||||||||||| ||||||| |||||||||  ||||| ||| ||||||||||||||||||    
T  42719668 tttatcatatatttttgtaggcattatgtcgttatatgccattaacttgaatactgtaagtttgttcg 42719735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 224
Target Start/End: Complemental strand, 49552247 - 49552037
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| |||||||||| |||||| |    
T  49552247 ggtgttcattttattcacattgaaagatcgattattcaatcaaagatttgagcatcaacgttgcagatccggaggccatggatattccggtgactttagt 49552148  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||    ||| |||| ||||||| |||||||| |    
T  49552147 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgc----agattcatcctttacg-tttttagcag 49552053  T
Q  209 tgttaaatgatgtaat 224  Q
    |||| |||||||||||    
T  49552052 tgttgaatgatgtaat 49552037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 17237856 - 17238089
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  17237856 ggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaat 17237955  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||| |||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| |||||||||||     || || | ||||||| ||||||||||    
T  17237956 tttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgc----tgattcttcctttacg-tttttagcgg 17238050  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||| ||||||| ||| |||||    
T  17238051 tgttgaatgatgtaatatctcaatttgaatgaatgaata 17238089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 44907422 - 44907189
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| || ||||||  | |||||||||||||||||||||    
T  44907422 ggtgttcatttaattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagatccggaggcaacgaatattccggtcactttaat 44907323  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||| ||||||||| |||||||||||||  ||| |||||||||||    ||| |||| ||||||| |||||||||     
T  44907322 ttcatcatatatttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgt 44907228  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||||||||||| ||| |||||    
T  44907227 tgttgaatgatgtaatatctcgatttgaatgaatgaata 44907189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 36906174 - 36906406
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||  | ||||||  ||  ||||||| ||||||||||||    
T  36906174 gtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagttccggaggcaatagatattccagtcactttaatt 36906273  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    | ||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| |||||||||||    
T  36906274 tcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgc----agattcatcctttacg-tttttagcggt 36906368  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  36906369 gttgaatgatgtaatctctcgatttgaatgaatgaata 36906406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 39917421 - 39917270
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||| |||||||||||    
T  39917421 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtcatggatattccagtcactttaat 39917322  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||| ||||||    
T  39917321 tttatcatatatttttgtaggcattatgcctttatatgctattaacttggat 39917270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 30648742 - 30648509
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||| || |||||||||| |||| ||||||||    
T  30648742 ggtgttcattttattcatattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcaaatccggcggccatgaatatttcggtaactttaat 30648643  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||| ||| || |||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||| | ||||||||||    
T  30648642 tttatcatatatttttataggcaatatgtcgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttatg-tttttagcgg 30648548  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||| |||||||||||||||||||| ||| |||||    
T  30648547 tgttgaattatgtaatctctcgatttgaatgaatgaata 30648509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 46934693 - 46934923
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||| |||||||| ||||| || ||||| ||||| |||||||||||||||||||    
T  46934693 ggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgggcgtcaacattgcagatccggagttcatggatattccggtcactttaat 46934792  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| |   ||| ||||||||| |||||| ||||||  ||| ||||||||    |||||| |||| ||||||| |||||||||     
T  46934793 tttatcatatatttttgtaggc---atgtcgttatatgctattaacttggatgttgtgagtttgtt----cgtagattcatcctttacg-tttttagcga 46934884  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||| |||||||||||||||| ||| |||||    
T  46934885 tgttgaatgatgcaatctctcgatttgaatgaatgaata 46934923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 29503535 - 29503681
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  29503535 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggca 29503634  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||| |||||| |||||| |||| ||| ||||||||    
T  29503635 ttatgccgttatatgctattaacttggattctgtgagtatgttcgca 29503681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 4178616 - 4178849
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||| ||||| ||||||| ||||||||| |||||||||| |||||||| ||||| || |||||| |||| |||||||||||||||||||    
T  4178616 ggtgttcatttgatttatattgaaagatccattattcaaacaaagatttgggcgtcaacattgcagatccggaggccatggatattccggtcactttaat 4178715  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||| ||| |||||||| |||||||| |||||| ||||||  || | |||||||    | |||| |||| ||||||| |||||||| |    
T  4178716 tttatcatatatttttctaggcattatgctgttatatgctattaacttggatgatgcatgtttgtt----catagattcatcctttacg-tttttagcag 4178810  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  4178811 tgttgaatgatgtaatctctcgatttgaatgaatgaata 4178849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 35499221 - 35498990
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||| ||| |||||||| |||||   ||| |||||||| ||||||||||    
T  35499221 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgttaacattgcaaatccggagacaatggatattccgatcactttaat 35499122  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || |||||||||||||||   ||||||| ||||||||| |||||||||||||  ||||||||| |||||    ||| |||| ||||||| ||||||||||    
T  35499121 ttcatcatatatttttgt--gcattatgtcgttatatgctattaatttggatgttgtaagttttttcgc----agattcatcctttacg-tttttagcgg 35499029  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||| ||||||||||| ||| |||||    
T  35499028 tgttgaatgatgtaatccctcgatttgaatgaatgaata 35498990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 50611441 - 50611208
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| || |||||| |||| |||||| |||||||| |||    
T  50611441 ggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatattcgggtcacttaaat 50611342  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||| ||||||||| |||||| | |||||||| |||||| ||||||  | |  ||||||||||    ||| |||| ||||||| ||||||||||    
T  50611341 tttatcatatgtttttgtaggcattatacagttatatgctattaacttggatgatatgggtttgttcgc----agattcatcctttacg-tttttagcgg 50611247  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||||||||||| ||| |||||    
T  50611246 tgttgaatgatgtaatatctcgatttgaatgaatgaata 50611208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 38855059 - 38854829
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||| |||||| |||  ||||||||| |||||||||    
T  38855059 ggtgttcatttgatttatattgaaagatcgattattcaatcgaatatttgggcgtcaacgttgcaaatccggaggccattgatattccgggcactttaat 38854960  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||| |||||||||| |||||| ||||||  ||| ||||| |||||    | | |||| ||||||| ||||||||||    
T  38854959 tttatcatatatttttgtagtcattataccgttatatgttattaacttggatgatgtgagttttttcgc----atattcatcctttacg-tttttagcgg 38854865  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||   ||||| |||||||||||||||||| ||| |||||    
T  38854864 tg---aatgacgtaatctctcgatttgaatgaatgaata 38854829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 2342522 - 2342640
Alignment:
Q  18 tttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcat 117  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  2342522 tttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcaaattcggaggatatggatattccggtcactttaattttatcat 2342621  T
Q  118 atatttttgtagacattat 136  Q
    |||||||||||| ||||||    
T  2342622 atatttttgtaggcattat 2342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 14464561 - 14464730
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||  ||| || |||| |||||||||||    
T  14464561 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatgttccagtcactttaat 14464660  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||| |||||||||||||||| |||||||| |||||||  |||||| ||||||  | | ||||||||||||    
T  14464661 tttgtcatatatttttgtaggcattatgctgttatatactattaacttggatgttctgagtttgttcgca 14464730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 51202277 - 51202064
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||  | ||||||||||||||||| ||||||||||||||||| ||||||  |||||||| ||||||||||||||    
T  51202277 ggtgttcatttgattcatattgaaagatcagtaattcaatcaaagatttgggcgtcaacgttgcaaatccggaggcgatgaatatcccggtcactttaat 51202178  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||          |||| |||||| |||| |||||||||||    ||| ||||| |||||| ||||||||||    
T  51202177 tttatcatatatttttgtaggcattatgtcg----------ttaacttggatgctgtgagtttgttcgc----agattcatcatttacg-tttttagcgg 51202093  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    || ||||| ||||||||||||||||||||    
T  51202092 tgataaataatgtaatctctcgatttgaa 51202064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 176
Target Start/End: Original strand, 22803073 - 22803247
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggt--------catgaatattccggtc 101  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||         ||||  ||||||| ||    
T  22803073 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccgatc 22803172  T
Q  102 actttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||    
T  22803173 actttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttc 22803247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 46178621 - 46178788
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| ||| || ||||||||||||||||| ||| |||||||||||||| || |||||| ||||  ||||||||||||||| |||    
T  46178621 gtgttcatttgattcatattgaaatattgattattcaatcaaagaattgggcgtcaacgttgcagatccggagg-catgggtattccggtcacttttatt 46178719  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||  ||||||| ||||||||| |||||| ||||||  ||| ||||||||||||    
T  46178720 ttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgca 46178788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 36734715 - 36734572
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||| | |||||||||||||| ||||||||||||| |||||||||||||| ||  ||||| ||||| |||| |||| ||||||||    
T  36734715 ggtgttcatttgattcataatgaaagatcgattattgaatcaaagatttgggcgtcaacgttgcagatctggagg-catgagtatttcggttactttaat 36734617  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||    
T  36734616 tttatcatatatttttgtaggcattatgtcgttatatgctattaa 36734572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 38440602 - 38440381
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| ||  ||||| ||||||||||||| ||||||||||||    
T  38440602 tgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacattgcagatctggaggccatgaatattccgatcactttaattt 38440503  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    | |||          ||| |||||||| |||||||| |||||| |||||| |||| |||||| ||||    ||| |||| ||||||| ||||||||||||    
T  38440502 tgtca----------taggcattatgctgttatatgctattaacttggatgctgtgagtttgctcgc----agattcatcctttacg-tttttagcggtg 38440418  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || ||||||||||||| |||||||||| ||| |||||    
T  38440417 ttgaatgatgtaatctttcgatttgaatgaatgaata 38440381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 31794122 - 31794271
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  31794122 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgcagattcggagg-catgagtattccggtcagtttaat 31794220  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    ||||||||||| | |||||| || || | ||||||||| |||||| ||||||    
T  31794221 tttatcatatactgttgtaggca-tacgtcgttatatgctattaacttggat 31794271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 25849861 - 25850029
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||| || |||| | |||||||||||| ||||||||||     
T  25849861 ggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgtcaacgttgcagatccgga-gacatgaatattccagtcactttaac 25849959  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||  ||||||||||||  ||||||| ||||||||  |||||| |||| |  ||| ||||||||||||    
T  25849960 tttattgtatatttttgtaagcattatgtcgttatatactattaacttgggtgttgtgagtttgttcgca 25850029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 21488142 - 21488313
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggag--gtcatgaatattccggtcacttta 107  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| | ||  ||||  | |||||  ||||  |||||||||    
T  21488142 ggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgtagatctggaggaggcatgagcattctagtcacttta 21488241  T
Q  108 attttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||||| |||||| |  ||||||| |||||| ||| ||||||| ||||| ||||||    
T  21488242 attttatcatatatttttgtaggcattatactcttatatgctattaacttgaatactgtgagtttattcgca 21488313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 21916555 - 21916745
Alignment:
Q  40 attattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgcc 139  Q
    |||||||||||||| |||||||||||||||||||| || ||||   |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21916555 attattcaatcaaa-atttgagcgtcaacgttgcagatccggaaaccatggatatttcggtcactttaattttatcatatatttttgtagatattatgcc 21916653  T
Q  140 gttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttg 235  Q
      | |||| |||||| ||||||  ||| ||||||||| |    ||| |||| ||||||  |||||||||||||| ||||||||||| ||||||||||    
T  21916654 cctgtatgctattaacttggatgatgtgagtttgttctc----agattcatcctttac-atttttagcggtgttgaatgatgtaatatctcgatttg 21916745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 6910731 - 6910622
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| | ||  ||| | ||||  |||||| |||| |||||||    
T  6910731 gtgttcatttgattcatattgaaagatcgattattcaatcatagatttgagcgtcaatgttgtagatatgga-gacatg--tattccagtcaatttaatt 6910635  T
Q  111 ttatcatatattt 123  Q
    |||||||||||||    
T  6910634 ttatcatatattt 6910622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 246
Target Start/End: Original strand, 37169304 - 37169512
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    |||||| |||||||||| ||||| ||   ||||||||||||| || ||||| | |||  ||||||  ||| |||||||| ||||||||||||||||| ||    
T  37169304 aagatcaattattcaattaaagaattagacgtcaacgttgcagatccggagat-atgtgtattccaatcattttaatttgatcatatatttttgtaggca 37169402  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    |||||| |||||||| |||||| ||| |   ||| ||||| |||||     || |||| ||||||| |||||||||||||| ||||||||||||| | ||    
T  37169403 ttatgctgttatatgctattaacttgaaggttgtgagtttcttcgc----ggattcatcctttacg-tttttagcggtgttgaatgatgtaatctattga 37169497  T
Q  232 tttgaacgaaggaat 246  Q
    |||||| ||| ||||    
T  37169498 tttgaatgaaagaat 37169512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 30293495 - 30293419
Alignment:
Q  42 tattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatat 119  Q
    ||||||||||| |||||||| ||||| |||||||||||||| | ||||| |||| ||||||| |||| ||||||||||    
T  30293495 tattcaatcaatgatttgagagtcaatgttgcaaattcggatg-catgagtatttcggtcacattaactttatcatat 30293419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 2342638 - 2342732
Alignment:
Q  149 tattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||| |||||| |||| ||||||||||||    || ||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| ||| |||||    
T  2342638 tattaacttggatgctgtgagtttgttcgca----gattcatcctttacgtcttt-agcggtgttaaacgatgtaatctctcgatttgaatgaatgaata 2342732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 21431693 - 21431827
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | ||||  |||| |||| |||| | ||||||||||| | ||||||| |||| |||||||    
T  21431693 attcaaccaacgatttggacgtcaacgttgcagatccggaag-catgggtatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgtt 21431790  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     ||||||||||| |||| | |||| || |||||||||    
T  21431791 gtatgatattaacttgggtgctgtgagattgttcgca 21431827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 42460829 - 42460963
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||||| |||||| |||||||||||||| || | || | |||||| |||| ||| | ||  |||||||||||| | ||||||| |||| ||  |||    
T  42460829 attcaatcaatgatttgggcgtcaacgttgcagatacagaag-catgaacattctggtgatttagattttatcatat-tatttgtaggcattttgttgtt 42460926  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| |||||| ||||||||||||    
T  42460927 gtatgctattaacttgggtactgtgagtttgttcgca 42460963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 50194267 - 50194209
Alignment:
Q  121 tttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||| |||| |||||||||||| |||||| ||||||  ||| ||||||||||||    
T  50194267 tttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgca 50194209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 19862284 - 19862204
Alignment:
Q  96 ccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcg 177  Q
    ||||||||| |||||||||||||| | |||  ||||||| || ||||||||| |||||||||| ||  ||||| ||||||||    
T  19862284 ccggtcactctaattttatcatat-tatttagagacattttgtcgttatatgctattaatttgaattttgtaaatttgttcg 19862204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 21533805 - 21533683
Alignment:
Q  55 atttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    ||||| |||||||||||||| || |||| | ||||  |||| |||| ||||   ||||||||||| | ||||||| |||| ||||||| |||| ||||||    
T  21533805 atttgggcgtcaacgttgcagatccggaag-catgggtatttcggtgacttaggttttatcatat-tatttgtaggcattttgccgttgtatgctattaa 21533708  T
Q  155 tttggatactgtaagtttgttcgca 179  Q
     |||| | |||| ||||||||||||    
T  21533707 cttgggtgctgtgagtttgttcgca 21533683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 43488598 - 43488464
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||| ||||||||||||| || |||| | ||||| |||| |||| | ||   |||||||||||  |||| ||| | || |||||||    
T  43488598 attcaagcaatgatttgaacgtcaacgttgcagatccggaag-catgagtatttcggtgatttaggttttatcatattatttt-taggctttttgccgtt 43488501  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| ||||||||||| | |||| ||||||||||||    
T  43488500 gtatgctattaatttgggtgctgtgagtttgttcgca 43488464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 52923125 - 52922991
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | ||||  |||| |||| |||| | ||||||||||| | ||||||| |||| | |||||    
T  52923125 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgggtatttcggtgacttaagttttatcatat-tatttgtaggcattttaccgtt 52923028  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| | |||| ||||||||||||    
T  52923027 gtatgctattaacttggctgctgtgagtttgttcgca 52922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 9687227 - 9686995
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| || | |||| ||||||||||||||||||||||||    
T  9687227 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaa-gttgcagatccagaggccatgaatattccggtcactttaat 9687129  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  9687128 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 9687034  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||||||||||| ||| |||||    
T  9687033 tgttgaatgatgtaatatctcgatttgaatgaatgaata 9686995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 25406307 - 25406074
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| |||||||||||||||||||||||||||   ||||||||||||| || | ||||||||| |||||||||| ||||||||    
T  25406307 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttcgacgtcaacgttgcagatccagaggtcatggatattccggtgactttaat 25406208  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| ||||| |||||| ||||||||||    
T  25406207 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcttttacg-tttttagcgg 25406113  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||||||||||| ||| |||||    
T  25406112 tgttgaatgatgtaatatctcgatttgaatgaatgaata 25406074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 45426089 - 45425856
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||  |||||||||||||||||||||| |||||||||||||||||||| || || ||| |||||||||| |||||||||||||    
T  45426089 ggtgttcatttgattcatatcgaaagatcgattattcaatcaaaaatttgagcgtcaacgttgcagatccgaaggccatgaatatttcggtcactttaat 45425990  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||| |||||||||| |||||| |||||| |||| ||||| |||||    ||| ||||| |||||| |||||||||     
T  45425989 tttatcatatatttttgtaggcattataccgttatatgctattaacttggatgctgtgagtttattcgc----agattcatcatttacg-tttttagcga 45425895  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    | ||||||||||||||||||| ||||||| ||| |||||    
T  45425894 tattaaatgatgtaatctctcaatttgaatgaatgaata 45425856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 51868668 - 51868435
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| ||  ||||  ||||||||||||| | ||||||||    
T  51868668 ggtgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatctggagaccatgaatattccgatgactttaat 51868569  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    | | |||| ||||||| ||||||||||    
T  51868568 tttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgtgagtttgttcgc----aaattcatcctttacg-tttttagcgg 51868474  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  51868473 tgttgaatgatgtaatctctcgatttgaatgaatgaata 51868435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 51871921 - 51872154
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| |||||||||||||||||||||| |||||| ||||||||||||| || |||||| |||| |||||||||| ||||||||    
T  51871921 ggtgttcattttattcttattgaaagatcgattattcaatcaaatatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaat 51872020  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  51872021 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 51872115  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| || ||||||||||||| ||||||| ||| |||||    
T  51872116 tgttgaaggatgtaatctctcaatttgaatgaatgaata 51872154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 28035197 - 28035410
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| || |||||| ||||||||||||||||||||||||    
T  28035197 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacattgcagatccggaggccatgaatattccggtcactttaat 28035296  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||| || |||  ||| |||||||      | ||| |||| ||||||| ||||||||||    
T  28035297 tttatcataaatttttgtaggcattatgccgttatatgttattaactttgatgttgtgagtttgt------gcagattcatcctttacg-tttttagcgg 28035389  T
Q  209 tgttaaatgatgtaatctctc 229  Q
    |||| ||||||||||||||||    
T  28035390 tgttgaatgatgtaatctctc 28035410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 9919447 - 9919668
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||| ||||||||    
T  9919447 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttgaacgtcaatgttgcaaatccggaggccatgaatattccggtgactttaat 9919546  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||| | || ||||||  ||||||||||    
T  9919547 ttgatcatatatttttgtag-cattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agatttatcctttac-atttttagcgg 9919640  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    | || ||||||||||||||||||||||||    
T  9919641 t-ttgaatgatgtaatctctcgatttgaa 9919668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 50272163 - 50271940
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| || ||||||  ||||||||||| |||||||||||    
T  50272163 ggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccagtcactttaat 50272064  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||| |||||||||||||||| ||||||||||||||||| |||||| || |||  ||| |||||||||||    ||| |||| | ||||  ||||||||||    
T  50272063 tttgtcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgc----agattcatccgttac-ctttttagcgg 50271969  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| ||||||||||| ||||||||||||    
T  50271968 tgttgaatgatgtaatatctcgatttgaa 50271940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 5324581 - 5324348
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| || ||| || |||| ||||| |||||||||||||    
T  5324581 ggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgggggccatggatatttcggtcactttaat 5324482  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| || ||||||||    ||| |||| ||||||| |||||||||     
T  5324481 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgag-ttgttcgc----agattcatgctttacg-tttttagcga 5324388  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaataa 248  Q
    |||| ||||||||||||||||||||| || ||| ||||||    
T  5324387 tgttgaatgatgtaatctctcgatttaaatgaatgaataa 5324348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 30879133 - 30879366
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| |||||||||  ||| |||||||| ||||||||||    
T  30879133 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagattcggaggcaatggatattccgatcactttaat 30879232  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    || |||||||||||||||||||||||||  |||||||  |||||| |  |||  ||| |||||||||||    ||| ||| |||||||| ||||||||||    
T  30879233 ttcatcatatatttttgtagacattatgttgttatatactattaactatgatgttgtgagtttgttcgc----agattcattctttacg-tttttagcgg 30879327  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  30879328 tgttgaatgatgtaatctctcgatttgaatgaatgaata 30879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 45805851 - 45805619
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||  ||| ||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||| |||||||||| ||||||||    
T  45805851 ggtgttcatttcattccgattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaat 45805752  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| |||||| |||    
T  45805751 tttatcatatatttttgtaggtattatgtcgttatatg-tattaacttggatgatgtgagtttgttcgc----agattcatcctttacg-tttttaacgg 45805658  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  45805657 tgttgaatgatgtaatctctcgatttgaatgaatgaata 45805619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 40881035 - 40880816
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || || ||| |||| |||||| ||||||||||||    
T  40881035 ggtgttcatttgattcatattaaaa-atcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatggatattctggtcactttaat 40880937  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||||| |||||||| |||||| ||||||  ||| |||||||||||    |||  |||| |||||| ||||||||||    
T  40880936 tttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgc----agatgcatcatttacg-tttttagcgg 40880842  T
Q  209 tgttaaatgatgtaatctctcgattt 234  Q
    |||| ||| || ||||||||||||||    
T  40880841 tgttgaataatataatctctcgattt 40880816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 5701317 - 5701540
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| ||||||| |||||||||||||||| || ||||||||||| || |||||   ||| |||||||||||||||||||    
T  5701317 ggtgttcatttgattcatattgaaatatcgattgttcaatcaaagatttgggcatcaacgttgcagatccggagacaatggatattccggtcactttaat 5701416  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||| ||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  5701417 ttcatcatatatttgtgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 5701511  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| |||||||||||||||| |||||||    
T  5701512 tgttgaatgatgtaatctctcaatttgaa 5701540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 7342782 - 7343013
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||  |||| |||||||||| ||||||||||    
T  7342782 tgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggagaccatggatattccggtgactttaattt 7342881  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    |||||||||||||| ||| |||||||  |||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||||    
T  7342882 tatcatatatttttataggcattatgatgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcggtg 7342976  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || | |||||||||||||||||||||| ||| |||||    
T  7342977 ttgagtgatgtaatctctcgatttgaatgaatgaata 7343013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 11454000 - 11454218
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||||| || ||||||||||  |||||| |||||||||||||||||||    
T  11454000 atttgattcatcttgaaagagcgattattcaatcaaagatttgagcgtcaacattgcagatccggaggtcatagatattctggtcactttaattttatca 11454099  T
Q  117 tatatttttgtagacattatgccgt--tatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgtta 213  Q
    ||||||| ||||| ||||||||| |  |||||| |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||||||     
T  11454100 tatatttatgtaggcattatgccattatatatgctattaacttggatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcggtgttg 11454194  T
Q  214 aatgatgtaatctctcgatttgaa 237  Q
    ||||||||||||||||||||||||    
T  11454195 aatgatgtaatctctcgatttgaa 11454218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 9172548 - 9172781
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||| |||  |||||||||| ||||||||    
T  9172548 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaat 9172647  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||| ||| |||||||||| ||| || |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  9172648 tttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 9172742  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| ||||||| ||| |||||    
T  9172743 tgttgaatgatgtaatctctcaatttgaatgaatgaata 9172781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 9180530 - 9180763
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||| |||  |||||||||| ||||||||    
T  9180530 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaat 9180629  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||| ||| |||||||||| ||| || |||||| ||||||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  9180630 tttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 9180724  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| ||||||| ||| |||||    
T  9180725 tgttgaatgatgtaatctctcaatttgaatgaatgaata 9180763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 19715918 - 19715685
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||| ||   ||||  ||| |||||||||||||||||||    
T  19715918 ggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaacgttgcagatctagaggcaatggatattccggtcactttaat 19715819  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| |||||||| |||||||| |||||| |||||| |||| ||||| |||||    ||| |||| ||||||| ||||||||||    
T  19715818 ttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttattcgc----agattcatcctttacg-tttttagcgg 19715724  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| |||| || ||| |||||    
T  19715723 tgttgaatgatgtaatctctcaatttaaatgaatgaata 19715685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 50166122 - 50165889
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||||||| | || |||||| ||||  ||||| ||| ||||||||    
T  50166122 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgtagatccggaggccatgggtattctggtgactttaat 50166023  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||| |    ||| |||| ||||||| ||||||||||    
T  50166022 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcac----agattcatcctttacg-tttttagcgg 50165928  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  50165927 tgttgaatgatgtaatctctcgatttaaatgaatgaata 50165889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 20266367 - 20266593
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| ||||||||||| |||||||||||||||| || ||||||||||| |||||||||  ||| || |||| ||||||||||||| ||||    
T  20266367 atttgattcatattgaaagatcgattgttcaatcaaagatttgggcatcaacgttgcagattcggaggcaatggatgttccagtcactttaatttcatca 20266466  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaa 215  Q
    |||| ||||||||||||||||||||||||||  ||||| ||||||  ||| ||||| |||||    ||| |||| ||||||| ||||||| |||||| ||    
T  20266467 tatacttttgtagacattatgccgttatatgcaattaacttggatgttgtgagtttattcgc----agattcatcctttacg-tttttagtggtgttgaa 20266561  T
Q  216 tgatgtaatctctcgatttgaacgaaggaata 247  Q
    | |||||||||||||||||||| ||| |||||    
T  20266562 taatgtaatctctcgatttgaatgaatgaata 20266593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 33291441 - 33291208
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||   | ||||||||||||||||| |||||||||||||| |||||||||  ||| |||||||||||||||||||    
T  33291441 ggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccggtcactttaat 33291342  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||||||||||| |||||||  |||||||| | |||| |||||| |||| |||||||| ||    ||| ||||| |||||| ||||||  ||    
T  33291341 tttatcatatatttttgtaggcattatgttgttatatgctgttaacttggatgctgtgagtttgttagc----agattcatcatttacg-tttttattgg 33291247  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  33291246 tgttgaatgatgtaatctctcgatttaaatgaatgaata 33291208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 50148428 - 50148661
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| || |||| |  ||| |||||||||||||||||||    
T  50148428 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatgtgggcgtcaacgttgcagatccggaagcaatggatattccggtcactttaat 50148527  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| ||||  |||||    ||| |||| ||||||  |||||||||     
T  50148528 ttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttgtttcgc----agattcatcctttac-atttttagcga 50148622  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  50148623 tgttgaatgatgtaatctctcgatttgaatgaaagaata 50148661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 7997848 - 7998012
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| ||| ||||||| ||||| |||||||||| |||||||||||||| || ||||||  ||||||||||||||||||||||||    
T  7997848 gtgttcatttgattcatattgaaatatcgattgttcaaccaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccggtcactttaatt 7997947  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgtt 175  Q
    | ||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||    
T  7997948 tcatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtt 7998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 247
Target Start/End: Original strand, 3871488 - 3871698
Alignment:
Q  32 aaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagac 131  Q
    |||||||||||||||||||||||||||| | |||||||||||| || | ||||||||| ||||| |||||||| |||||||| ||||||||||||||| |    
T  3871488 aaagatcgattattcaatcaaagatttgggtgtcaacgttgcagatccagaggtcatgtatatttcggtcactataattttaacatatatttttgtaggc 3871587  T
Q  132 attatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggtgttaaatgatgtaatctctcga 231  Q
    |||||||||||||||| |||||| ||||||  ||| ||||||||    ||| || |   ||||| | |||||||||||||| ||||||||||||||||||    
T  3871588 attatgccgttatatgctattaacttggatgttgtgagtttgtt----cgttgattatcctttatg-tttttagcggtgtttaatgatgtaatctctcga 3871682  T
Q  232 tttgaacgaaggaata 247  Q
    |||||| ||| |||||    
T  3871683 tttgaatgaatgaata 3871698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 35584641 - 35584413
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||| || |||||   ||| |||||||||||||||||||    
T  35584641 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagatccggagccaatggatattccggtcactttaat 35584542  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| |||||||| ||||||    ||||| |||||| |||| |||||||||||    | | |||| |||||||  |||||||||    
T  35584541 ttcatcatatatttttgtaggcattatgctgttata----attaacttggatgctgtgagtttgttcgc----aaattcatcctttacg--ttttagcgg 35584452  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    | || |||||||||||||||||||||||| ||| |||||    
T  35584451 tattgaatgatgtaatctctcgatttgaatgaatgaata 35584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 19723404 - 19723604
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    ||||||||||||||||| |||||||||| ||| || ||||||  ||| ||||| |||| |||||||||||||||||||||||||||| ||||||| ||||    
T  19723404 attcaatcaaagatttgggcgtcaacgtagcagatccggaggcgatggatatttcggttactttaattttatcatatatttttgtaggcattatgtcgtt 19723503  T
Q  143 atatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaa 241  Q
    ||||| |||||| |||||| |||| ||||| |||||    ||| |||| ||||||| ||||||| |||||| |||||||||||||||||||||||| |||    
T  19723504 atatgttattaacttggatgctgtgagtttattcgc----agattcatcctttacg-tttttagtggtgttgaatgatgtaatctctcgatttgaatgaa 19723598  T
Q  242 ggaata 247  Q
     |||||    
T  19723599 tgaata 19723604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 34519189 - 34519419
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| ||||||  |    |||||||| || |||||| |||| ||||||||||||||||||    
T  34519189 tggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttggac----acgttgcagatccggaggccatggatattccggtcactttaa 34519284  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||  ||||||| | |||| || |||||| |||||| |||| |||||||||||    ||| |||| ||||||| |||||||||    
T  34519285 ttttatcatatatttttgtatgcattatgtcattatttgctattaacttggatcctgtgagtttgttcgc----agattcatcctttacg-tttttagcg 34519379  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||  |  ||||||||||| ||||||||||| ||| |||||    
T  34519380 gtaatggatgatgtaatccctcgatttgaatgaatgaata 34519419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 30818374 - 30818223
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||| |||  |||||||||||||||||||||||||||  |||| ||||||| | || ||| || ||||||||||||||||||||||||    
T  30818374 ggtgttcatttgattcttatcgaaagatcgattattcaatcaaagatttaggcgttaacgttgtagatccggtggccatgaatattccggtcactttaat 30818275  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||| ||||||    
T  30818274 tttatcatatatttttgtaggcattatagcgttatatgctattaacttggat 30818223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 32677120 - 32676935
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    ||||||||||||||||| |||||||||||||| |||||||||  ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  32677120 attcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccagtcactttaattttatcatatatttttgtaggcattatgccgtt 32677021  T
Q  143 atatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    ||||     ||| ||||||  ||| |||||||||||    ||| ||||| |||||| ||||||| |||||| ||||||||||||||| ||||||||    
T  32677020 atat-----taacttggatgatgtgagtttgttcgc----agattcatcttttacg-tttttagtggtgttgaatgatgtaatctcttgatttgaa 32676935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 7312128 - 7311960
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||| |||||| ||||||||||  ||||||| ||||| || |||  | ||||| |||| ||||||||||| |    
T  7312128 ggtgttcatttgattcatattgaaagatcgataattcaaacaaagatttggacgtcaacattgcagatccggttg-catgagtatttcggtcactttagt 7312030  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||| ||||||||||||||||  |||||| ||||||| | ||||||||||||||    
T  7312029 tttatcatatatttttgtaggcattatgccgttatatactattaacttggatattataagtttgttcgca 7311960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 14545598 - 14545719
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||| ||||| ||||||| ||| |||||||||||||||||||||||||| ||    
T  14545598 aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgagtattccgatcattttaattttatcatatatttttgtaggca 14545697  T
Q  133 ttatgccgttatatgatattaa 154  Q
    ||||||||||||| | ||||||    
T  14545698 ttatgccgttatacgctattaa 14545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 18569333 - 18569165
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||||||| ||||||||||||||||||  |||||||| | |||||||||||| || | |||| ||||  ||||||||||||||||||    
T  18569333 ggtgttcatttaattcatattgaaagatcgattattcaattgaagatttgggtgtcaacgttgcagatccagagg-catgggtattccggtcactttaat 18569235  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||||||||||||  ||| ||||| ||||||    
T  18569234 tttatcatatacttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttattcgca 18569165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 48365788 - 48365620
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| || ||| |  ||| | ||||||| | ||||||||    
T  48365788 ggtgttcatttgattcatattgaaggatcgattattcaatcaaagatttgaacgtcaacgttgcagatccgg-gagcataagtattccgattactttaat 48365690  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||||  |||||| ||||||| | |||||| |||||| |||| ||||||||||||    
T  48365689 tttatcatatatttttgtaggaattatgtcgttataagttattaacttggatgctgtgagtttgttcgca 48365620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 38520554 - 38520392
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| || ||||||||||| |||||||||||||| |||||||   ||| |||||||||||||| ||||||||| |||| ||||||| |||||||||||    
T  38520554 ggtgttcatctgattcatattgaaagatcgattattaaatcaaa---ttgtgcgtcaacgttgcagattcggagg-catggatattccagtcactttaat 38520459  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    |||||| ||||||||||||| |||||| |||||||||| |||||| ||||||  ||| |||||||||    
T  38520458 tttatcgtatatttttgtaggcattataccgttatatgctattaacttggatgttgtgagtttgttc 38520392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 39987447 - 39987589
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| || |||||| ||||  ||||||||||||||||||    
T  39987447 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagaattgggcgtcaacgttgcagatccggagg-catgggtattccggtcactttaat 39987545  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaa 154  Q
    ||||||||||| |||| ||| |||||||| |||||||| ||||||    
T  39987546 tttatcatata-ttttataggcattatgctgttatatgctattaa 39987589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 11709649 - 11709497
Alignment:
Q  91 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat 190  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||  ||| |||||||||||    ||| ||||    
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctattaatttagatgttgtgagtttgttcgc----agattcat 11709554  T
Q  191 -ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
     ||||||| ||||||| |||||| |||||||||||||||||||||||| ||| |||||    
T  11709553 cctttacg-tttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaata 11709497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 33817161 - 33817023
Alignment:
Q  40 attattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgcc 139  Q
    ||||||||||||||||||||    ||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |    
T  33817161 attattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgtaggcattatgtc 33817062  T
Q  140 gttatatgatattaatttggatactgtaagtttgttcgc 178  Q
     ||||||| |||||| ||||||  ||| |||||||||||    
T  33817061 attatatgttattaacttggatgatgtgagtttgttcgc 33817023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 33876631 - 33876493
Alignment:
Q  40 attattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgcc 139  Q
    ||||||||||||||||||||    ||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |    
T  33876631 attattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgtaggcattatgtc 33876532  T
Q  140 gttatatgatattaatttggatactgtaagtttgttcgc 178  Q
     ||||||| |||||| ||||||  ||| |||||||||||    
T  33876531 attatatgttattaacttggatgatgtgagtttgttcgc 33876493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 40646728 - 40646964
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgat----tattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactt 105  Q
    |||||| |||||||||||||| ||||||||||    | |||||||||||||||| |||||||||||||| || ||||||  ||| |||||| |||||||     
T  40646728 ggtgtttatttgattcatattgaaagatcgatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattctggtcacta 40646827  T
Q  106 taattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaag-tttgttcgcacgtagactcat-ctttacgtttttt 203  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| |||||  ||||||  ||| || |||||||||    ||| |||| ||||||| |||||    
T  40646828 taatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagttttgttcgc----agattcatcctttacg-ttttt 40646922  T
Q  204 agcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||||| ||||   ||||||||||||||||| ||| |||||    
T  40646923 agcggtgttgaatg--ttaatctctcgatttgaatgaatgaata 40646964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 27872796 - 27872964
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||| ||| || ||||||||||||||| |||||||||||||||||||||| | || |||| | | ||||||||||  ||| ||||||    
T  27872796 ggtgttcatttaattcaaattgaaggatcgattattcaattaaagatttgagcgtcaacgttgtagat-cggaaggcgtgaatattccaatcattttaat 27872894  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||  ||||||||||||||||| |||||| ||| ||  ||| ||||||||||||    
T  27872895 tttatcatatatttttgtaagcattatgccgttatatgttattaacttgaatgttgtgagtttgttcgca 27872964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 41081726 - 41081561
Alignment:
Q  11 gtgttaatttgattcatatt-aaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    ||||| || ||||||||||| ||||||||||||||||||||||| || ||||| |||| |||||| || |||||| ||||  ||||| ||||| ||||||    
T  41081726 gtgttcatatgattcatattgaaaagatcgattattcaatcaaaaatctgagcatcaatgttgcagatccggagg-catgtgtattctggtcattttaat 41081628  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    |||||||||||||||||||| |||||||| |||||||| |||||| | ||||  ||| |||||||||    
T  41081627 tttatcatatatttttgtaggcattatgcagttatatgttattaactcggatgttgtgagtttgttc 41081561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 39927577 - 39927409
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||| |||||||| |||||||| |||| |||| ||| |||||   |||||||||||| || || ||  ||||| ||||||  ||||||||||    
T  39927577 ggtgttcatttgtttcatattgaaagatcggttatccaataaaaaatttggatgtcaacgttgcagatccgaaga-catgagtattccaatcactttaat 39927479  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||  ||| ||||||||||||    
T  39927478 tttatcatatatttttgtaggcattatgccgttatatcttattaatttggatgttgtgagtttgttcgca 39927409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 31836865 - 31836975
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |  |||| |  ||| |||||||||||||||||||    
T  31836865 ggtgttcatttgattcatattgaaaaatcgattgttcaatcaaagatttgagcgtcaacgttgcagaaccgga-gcaatggatattccggtcactttaat 31836963  T
Q  110 tttatcatatat 121  Q
    || |||||||||    
T  31836964 ttcatcatatat 31836975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 247
Target Start/End: Original strand, 31836989 - 31837125
Alignment:
Q  107 aattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttag 205  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||    ||| | || ||||||  |||||||    
T  31836989 aatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtgagtttgttcgc----agatttatcctttac-atttttag 31837083  T
Q  206 cggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| |||||| |||||||||||||| || ||| |||||    
T  31837084 cggtgttgaatgatataatctctcgatttaaatgaatgaata 31837125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 27915046 - 27914897
Alignment:
Q  91 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat 190  Q
    ||||||||||||||||||||| |||||||||||||||||  ||| || ||||||||| ||||||||||||| |||| |||||||||       || ||||    
T  27915046 atattccggtcactttaatttcatcatatatttttgtaggtattttgtcgttatatgctattaatttggatgctgtgagtttgttc-------gattcat 27914954  T
Q  191 -ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
     ||||||  |||||||||||||| ||||||||||| ||| |||||||| ||| |||||    
T  27914953 cctttac-atttttagcggtgttgaatgatgtaatatcttgatttgaatgaatgaata 27914897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 247
Target Start/End: Original strand, 48217596 - 48217728
Alignment:
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    ||||||||||||||||||| |||||||  |||||||| |||||| ||||||  ||| |||||||||||    | | |||| ||||||  |||||||| ||    
T  48217596 ttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgttgtgagtttgttcgc----aaattcatcctttac-atttttagcagt 48217690  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  48217691 gttaaatgatgtaatctctcgatttgaatgaatgaata 48217728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 31130532 - 31130450
Alignment:
Q  94 ttccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| ||||||||  |||||| |||||| |||| |||||||||    
T  31130532 ttccggtcactttaattttattatgtatttttgtaggcattatgtcgttatattctattaacttggatgctgtgagtttgttc 31130450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 33817204 - 33817161
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaa 53  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  33817204 ggtgttcatttgattcatattgaaagatcgattattcaatcaaa 33817161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 33876674 - 33876631
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaa 53  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  33876674 ggtgttcatttgattcatattgaaagatcgattattcaatcaaa 33876631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 14872723 - 14872857
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| |||||| |||||||||||||| || |||| | ||||  ||||  ||| ||||   ||||||||||| | ||||||| |||| |||||||    
T  14872723 attcaaccaatgatttgggcgtcaacgttgcagatccggaag-catgggtattttggtgacttaggttttatcatat-tatttgtaggcattttgccgtt 14872820  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||||| |||| ||||||||||||    
T  14872821 gtatgctattaacttggatgctgtgagtttgttcgca 14872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 21947626 - 21947492
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | |||||||||| |||| |||| | ||||||||||| | ||||||| |||| |||||||    
T  21947626 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catgaatatttcggtgacttaagttttatcatat-tatttgtaggcattttgccgtt 21947529  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||  |||||| |||| |  ||| ||||||||||||    
T  21947528 gtattttattaacttgggtgatgtgagtttgttcgca 21947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 47132987 - 47133121
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||| | ||||||  ||||||| ||||| || |||| | ||||| ||||| ||| | ||  |||| ||||||| ||||||||| |||| |||||||    
T  47132987 attcaatcgatgatttggacgtcaacattgcagatccggaag-catgagtattctggtgatttagatttcatcatat-tttttgtaggcattttgccgtt 47133084  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||| |||||| ||||||  ||| ||||||||||||    
T  47133085 atatgctattaacttggatgttgtgagtttgttcgca 47133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 14545721 - 14545766
Alignment:
Q  202 ttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||| || |||||||||||||||| ||||||||||| |||||    
T  14545721 ttagcggtattgaatgatgtaatctctctatttgaacgaatgaata 14545766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 44637567 - 44637644
Alignment:
Q  106 taattttatcatatatttttgtagacatta----tgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||  |||||||||||| |||||    |||||||||||| |||||| |||||| |||| ||||| ||||||    
T  44637567 taattttatctcatatttttgtaggcattaattatgccgttatatgttattaacttggatgctgtgagtttattcgca 44637644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 49627075 - 49627131
Alignment:
Q  123 tttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||| ||||||| |||| ||||||||||| |  ||| ||||||||||||    
T  49627075 tttgtagacattttgccgttgtatgctattaatttgggtgttgtgagtttgttcgca 49627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 51916673 - 51916595
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatattt 123  Q
    |||||||||| ||||||||||||||||||||| || |||| | ||||| |||| | || ||||  ||||||||||||||||    
T  51916673 attcaatcaatgatttgagcgtcaacgttgcagatacggaag-catgagtatttc-gtgacttagattttatcatatattt 51916595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 11464232 - 11464452
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  11464232 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 11464331  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||    |||||| |||| ||||||| ||||||||||    
T  11464332 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgtt----cgtagattcatcctttacg-tttttagcgg 11464426  T
Q  209 tgttaaatgatgtaatctctcgattt 234  Q
    |||| |||||||||||||||||||||    
T  11464427 tgttgaatgatgtaatctctcgattt 11464452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 14906944 - 14906713
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| |||||||||||||| ||| |||||  ||| |||||||||||||||||||||    
T  14906944 tgttcatttgattcgtattaaaagatcgattgttcaatcaatgatttgggcgtcaacgttgcagatttggaggcaatggatattccggtcactttaattt 14906845  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtg 210  Q
    |||||||||||||||||| |||||||  |||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||||    
T  14906844 tatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgc----agattcatcctttacg-tttttagcggtg 14906750  T
Q  211 ttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    || |||||||||||||||||||||||| ||| |||||    
T  14906749 ttgaatgatgtaatctctcgatttgaatgaatgaata 14906713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 4809025 - 4809258
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  4809025 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaggatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 4809124  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| || |||  ||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  4809125 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 4809219  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  4809220 tgttgaatgatgtaatctctcgatttgaatgaatgaata 4809258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 2655931 - 2656151
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| | |||||||| ||| || ||||||  ||| |||||||||||||||||||    
T  2655931 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggtgtcaacgtcgcagatccggaggcaatggatattccggtcactttaat 2656030  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    || ||||||||||||||||| |||||||| |||||||| |||||| |||||| |||| |||||||||||    | | ||||| |||||| ||||||||||    
T  2656031 ttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgc----aaattcatcatttacg-tttttagcgg 2656125  T
Q  209 tgttaaatgatgtaatctctcgattt 234  Q
    |||| |||||||||||||||||||||    
T  2656126 tgttgaatgatgtaatctctcgattt 2656151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 32724503 - 32724285
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| || |||||| |||| |||||||||||||||||||     
T  32724503 gtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaatc 32724404  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    ||||| ||||||||||||| ||||||| ||||||||  |||||| ||||||  ||| ||||||||    |||||| | || ||||||| |||||||||||    
T  32724403 ttatcttatatttttgtaggcattatgtcgttatatactattaacttggatgttgtgagtttgtt----cgtagatttatcctttacg-tttttagcggt 32724309  T
Q  210 gttaaatgatgtaatctctcgatt 233  Q
    ||| ||||||||||||||||||||    
T  32724308 gttgaatgatgtaatctctcgatt 32724285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 9072779 - 9073012
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||   |||||||||||| ||||||||| |||| |||||||| | ||||||||    
T  9072779 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagattcggaggccatggatattccgatgactttaat 9072878  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    |||||||||||||||||||  |||||| |||||||||| |||||| |||||| |||| |||||| || |    ||| ||| |||||||| ||||||||||    
T  9072879 tttatcatatatttttgtatgcattattccgttatatgctattaacttggatgctgtgagtttgctcac----agattcattctttacg-tttttagcgg 9072973  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  9072974 tgttgaatgatgtaatctctcgatttgaatgaatgaata 9073012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 9619380 - 9619147
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| || ||||||||||||| |||||||| ||||| || ||||||  ||| |||||||||||||||||||    
T  9619380 ggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaactttgcagatccggaggcaatggatattccggtcactttaat 9619281  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||   |||||||||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  9619280 ttcatcatatatttttgtaagtattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 9619186  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||| ||||||| ||| |||||    
T  9619185 tgttgaatgatgtaatatctcaatttgaatgaatgaata 9619147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 11725742 - 11725974
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| || ||||||||||| || ||||||||||||||| ||||||||| |||||||||||||| || |||||| |||| ||| ||||||||||||| |    
T  11725742 ggtgttcatctgattcatattgaa-gatcgattattcaattaaagatttgggcgtcaacgttgcagatccggaggccatggatactccggtcactttagt 11725840  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| ||||||||| |    ||| |||| ||||||| ||||||||||    
T  11725841 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcac----agattcatcctttacg-tttttagcgg 11725935  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||| ||||||| ||| |||||    
T  11725936 tgttgaatgatgtaatctctcaatttgaatgaatgaata 11725974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 29777280 - 29777513
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| |||| |||| ||||||||||||||||||||||||||||  ||||||| ||||| || |||||  |||| |||||||||| ||||||||    
T  29777280 ggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacattgcagatccggagaccatggatattccggtgactttaat 29777379  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
     |||||||||||||||| || ||||||| ||||||||| |||||| |||||| |||| |||||||||||    ||| |||| ||||||| ||||||||||    
T  29777380 attatcatatatttttggaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgc----agattcatcctttacg-tttttagcgg 29777474  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| |||||||||||||||||||||||| ||| |||||    
T  29777475 tgttgaatgatgtaatctctcgatttgaatgaatgaata 29777513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 42448050 - 42447884
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| || || ||| |||||||||||| | |||||||||    
T  42448050 ggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatgaatattccagacactttaat 42447951  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||| |||||||||    
T  42447950 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttc 42447884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 9498622 - 9498389
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||  || |||||||| | || || |||  ||| ||||||| |||||||||||    
T  9498622 ggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttggacgacaacgttgtagatccgaaggcaatggatattcctgtcactttaat 9498523  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    || ||||||||||||||||| ||||||||| ||||||| |||||| |||||| |||| ||||||||| |    ||| |||| ||||||| ||||||||||    
T  9498522 ttcatcatatatttttgtaggcattatgccattatatgctattaacttggatgctgtgagtttgttcac----agattcatcctttacg-tttttagcgg 9498428  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||||||||||| ||| |||||    
T  9498427 tgttgaatgatgtaatatctcgatttgaatgaatgaata 9498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 44099957 - 44099736
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||| ||| |||| ||||||||| || |||||| |||||||||||||  |||||||||    
T  44099957 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagagttgggcgtgaacgttgcagatccggaggccatgaatattccg--cactttaat 44099860  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    |||||||||||||||||||  ||||||| ||||||||| |||||| ||||||  ||| |||||||| ||    ||| |||| ||||||| ||||||||||    
T  44099859 tttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagc----agattcatcctttacg-tttttagcgg 44099765  T
Q  209 tgttaaatgatgtaatctctcgatttgaa 237  Q
    |||| |||||||||||||||| |||||||    
T  44099764 tgttgaatgatgtaatctctcaatttgaa 44099736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 43192370 - 43192148
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| ||||||||||| || ||||||||||||||| |||||| ||||| | |||||||||||| || |||||  ||||||||||||| |||||||||    
T  43192370 tggtgttcatttgattcattttgaaagatcgattattcgatcaaatatttgggtgtcaacgttgcagatccggaga-catgaatattccgatcactttaa 43192272  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||| ||||||  | | |||||||||||    ||| |||| ||||| | |||||||||    
T  43192271 ttttatcatatatttttgtatccattatgccgttatatgctattaacttggatgttctgagtttgttcgc----agattcatcctttatg-tttttagcg 43192177  T
Q  208 gtgttaaatgatgtaatctctcgatttga 236  Q
    ||||| |||||||||||||||||||||||    
T  43192176 gtgttgaatgatgtaatctctcgatttga 43192148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 23851517 - 23851294
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||| || ||||||  ||| ||||| |||| ||||||||    
T  23851517 ggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacgttgcagatccggaggcaatggatatttcggtaactttaat 23851418  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatctttacgttttttagcggt 209  Q
    || ||||||||||||||||| ||||||| ||||||||| |||||| || |||  ||| |||||||||||    ||| | ||||||   |||||||| |||    
T  23851417 ttcatcatatatttttgtaggcattatgtcgttatatgctattaacttagatgttgtgagtttgttcgc----agatttatcttttacttttttagtggt 23851322  T
Q  210 gttaaatgatgtaatctctcgatttgaa 237  Q
    ||| ||||||||||||||||||||||||    
T  23851321 gttgaatgatgtaatctctcgatttgaa 23851294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 34611865 - 34612098
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||   | ||||||||||||||||| |||||||||||||| |||||||||  ||| |||||||||||||||||||    
T  34611865 ggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccggtcactttaat 34611964  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactca-tctttacgttttttagcgg 208  Q
    |||||||||||||||||||| ||||||   |||||||| |||||| ||||||  ||| |||||||||||    ||| ||| |||||||| ||||||| |     
T  34611965 tttatcatatatttttgtaggcattatcttgttatatgctattaacttggatgttgtgagtttgttcgc----agattcattctttacg-tttttagtga 34612059  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||||||||||||| || ||| |||||    
T  34612060 tgttcaatgatgtaatctctcgattttaatgaatgaata 34612098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 43890147 - 43889982
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  43890147 ggtgttcatttgattcattttgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaat 43890048  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgtt 175  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| | ||||||    
T  43890047 ttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgattttgtt 43889982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 33896143 - 33896370
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||| ||||  ||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||| |||| |||||||||| ||||||||    
T  33896143 ggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaat 33896242  T
Q  110 tt----tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgtttttta 204  Q
    ||    |||||||||||||||||| |||||||| |||||||| |||||| ||||||  ||| ||||| |||||    ||| |||| ||||||  ||||||    
T  33896243 tttatctatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagttttttcgc----agattcatcctttac-attttta 33896337  T
Q  205 gcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    |||||||| ||||||||||||||||||||||||    
T  33896338 gcggtgttgaatgatgtaatctctcgatttgaa 33896370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 37565895 - 37565681
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| ||||||   | ||||||| ||||||||| |||| ||||||||| || || | |  ||| |||||||||||||||| |||||||||    
T  37565895 atttgattcatattgaaagataagtaattcaattaaagatttgggcgttaacgttgcagatccgaatgcgatggatattccggtcactttgattttatca 37565796  T
Q  117 tatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaa 215  Q
    ||||||||||||| |||||||| |||||||| |||||| |||||| |||| |||||||||||    | | |||| ||||||| ||||||| |||||| ||    
T  37565795 tatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgc----aaattcatcctttacg-tttttagtggtgttgaa 37565701  T
Q  216 tgatgtaatctctcgatttg 235  Q
    ||||||||||||||||||||    
T  37565700 tgatgtaatctctcgatttg 37565681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 43135579 - 43135433
Alignment:
Q  33 aagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagaca 132  Q
    ||||||||||||||||||||||||||| ||||||||||| || || |||| | |||| |||||| ||||||||||||||||||||||||||| |||| ||    
T  43135579 aagatcgattattcaatcaaagatttgggcgtcaacgtttcagatccggaagccatgtatattctggtcactttaattttatcatatattttcgtaggca 43135480  T
Q  133 ttatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||| |||||| ||||||  ||| ||| ||||||||    
T  43135479 ttatgccgttatatgttattaacttggatgttgtgagtatgttcgca 43135433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 11196950 - 11197109
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || |||||||||||||||||| |||||| |||||||||||||| || ||||     || |||||||| ||||||||||    
T  11196950 ggtgttcatttgattcatattgaa-gatcgattattcaatcaacgatttgggcgtcaacgttgcagatccgga-----tggatattccgatcactttaat 11197043  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgtt 175  Q
    ||||| |||||||||||||| |||||||| |||||||| |||||| |||||| |||| ||||||||    
T  11197044 tttattatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgtt 11197109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 16794353 - 16794521
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||| |||| | ||||||||||| | ||| ||| ||||  ||||| ||||  | ||||    
T  16794353 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagaattgaacatcaacgttgcagaatcgaagg-catgggtattctggtctatataat 16794451  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||||||  ||| ||||||||||||    
T  16794452 tttatcatatatttttgtagacattatgacgttatatggtattaacttggatgttgtgagtttgttcgca 16794521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 28239894 - 28240135
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggag--------gtcatgaatattccggtc 101  Q
    |||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| || |||||        | ||||  ||||||||||    
T  28239894 ggtgttcatttgattaatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccggtc 28239993  T
Q  102 actttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttt 200  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||  |||||| || ||| |||| ||||||||| |    ||| |||| ||||||| ||    
T  28239994 actttaattttatcatttatttttgtaagcattatgccgttatattctattaacttagatgctgtgagtttgttcac----agattcatcctttacg-tt 28240088  T
Q  201 tttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| |||| ||||| |||| || |||||||||| ||| |||||    
T  28240089 tttagcgatgttgaatgacgtaacctatcgatttgaatgaatgaata 28240135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 17949295 - 17949431
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||| || || |||||| |||| ||||| ||||||||||||    
T  17949295 tggtgttcattttattcatattgaaagatcgattattcaatcagagatttgggcgtcaacgttccagatccggaggccatggatattacggtcactttaa 17949394  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatg 147  Q
    ||||||||||||  ||||||| |||||||| ||||||||    
T  17949395 ttttatcatata--tttgtaggcattatgctgttatatg 17949431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 33342498 - 33342727
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| || |||| |||||||||||||||| |||  ||||| ||||||| ||  ||||| ||||| ||||| ||||||||||||    
T  33342498 ggtgtttatttgattcatattgaa-gatcaattattcaatcaaagaattggacgtca-cgttgcagatctggagg-catgagtattcaggtcactttaat 33342594  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcgg 208  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||| ||| || |||| |||||||||||    ||| ||||| |||||   |||||||||    
T  33342595 tttatcatatatatttgtaggcattatgccgttatatgctattaacttgaatgctgtgagtttgttcgc----agattcatcatttac--attttagcgg 33342688  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||| ||||||||| | |||||||| ||| |||||    
T  33342689 tgttgaataatgtaatctattgatttgaatgaatgaata 33342727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 19876271 - 19876399
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||| || | ||||||||| || |||||  |||| ||||||||||||||||||    
T  19876271 tggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcctgaacgttgcagatccggagaccatggatattccggtcactttaa 19876369  T
Q  109 ttttatcatatatttttgtagacattatgc 138  Q
    ||| ||||||||||||||||| ||||||||    
T  19876370 tttgatcatatatttttgtaggcattatgc 19876399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 33298916 - 33299084
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||  |||||  ||||||||||| |||||||||  ||||||||||||| || |||| | ||||| |||||  |||||||||||    
T  33298916 ggtgttcatttgattcatatcgaaagagtgattattcaattaaagatttggtcgtcaacgttgcagatacggatg-catgagtattctagtcactttaat 33299014  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||| || |||  ||| ||||||||||||    
T  33299015 tttatcatatatttttataggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgca 33299084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 27747136 - 27746987
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||| || ||||||||| | || |||| | ||||  ||||||||||||||| |     
T  27747136 ggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggcatcaacgttgtagatccggatg-catgggtattccggtcactttta- 27747039  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggat 161  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||    
T  27747038 tttatcatatatttttgtaggcattatgtcgttatatgctattaacttggat 27746987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 237
Target Start/End: Original strand, 44578135 - 44578314
Alignment:
Q  54 gatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatatta 153  Q
    |||||| |||||||||||||| || || | | |||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  44578135 gatttgggcgtcaacgttgcagatccgaatgacatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctatta 44578234  T
Q  154 atttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    | ||||||  |||||||||| || |    ||| |||| |||| || |||||| | ||||| ||||||||||||||||||||||||    
T  44578235 acttggatgatgtaagtttgatcac----agattcatcctttgcg-tttttaacagtgttgaatgatgtaatctctcgatttgaa 44578314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 11267162 - 11267302
Alignment:
Q  103 ctttaattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgtttt 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||    ||  |||| ||||||| |||    
T  11267162 ctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgc----agtttcatcctttacg-ttt 11267256  T
Q  202 ttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||||||  |||||||||||||||||||||||| ||| |||||    
T  11267257 ttagcggtgtcgaatgatgtaatctctcgatttgaatgaatgaata 11267302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 35580526 - 35580664
Alignment:
Q  18 tttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcat 117  Q
    ||||||||||||| || ||||||||||||| ||||||||||  || | ||||||||| || |||| | |||| ||||||||||||||||| |||||||||    
T  35580526 tttgattcatattgaatgatcgattattcactcaaagatttaggcatgaacgttgcagatccggatg-catggatattccggtcactttagttttatcat 35580624  T
Q  118 atatttttgtagacattatgccgttatatgatattaattt 157  Q
    |||||||||||| ||||||||| ||||| | |||||||||    
T  35580625 atatttttgtaggcattatgccattatacgctattaattt 35580664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 15597190 - 15597025
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | || |  | |||||  ||||| |||||||||||||    
T  15597190 ggtgttcatttgattcatattaaacgatcggttattcaatcgaagatttgagcgtcaacgttgtagatccata-gtcatagatatttcggtcactttaat 15597092  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttc 176  Q
    ||| ||||||| |||||||  ||||||| || |||||| |||||| | ||||  |||||||| ||||    
T  15597091 tttctcatatacttttgtatgcattatgtcgatatatgctattaactcggatgttgtaagttggttc 15597025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 15046957 - 15047122
Alignment:
Q  12 tgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattt 111  Q
    |||| |||||||| ||||| ||| ||||||| | |||| |||| ||||  ||||||||||||| || | |||| ||||  ||||||| | ||||||||||    
T  15046957 tgtttatttgattgatattgaaaaatcgatt-tccaataaaagttttggacgtcaacgttgcagatccagagg-catgtgtattccgattactttaattt 15047054  T
Q  112 tatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||| |||||| |||||||||| |||||| ||| ||  ||||||||||||||||    
T  15047055 tatcatatatttttgtaggcattataccgttatatgctattaacttgaatgttgtaagtttgttcgca 15047122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 39153158 - 39153021
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||| ||| |||||| ||||||||||| ||| ||||| | |||| ||||||| || |||||| ||||  ||||||| |||||||||||||||||    
T  39153158 atttgattcacattgaaagattgattattcaattaaaaatttgggtgtcagcgttgcagatccggagg-catgggtattccgatcactttaattttatca 39153060  T
Q  117 tatat-ttttgtagacattatgccgttatatgatattaa 154  Q
    ||||| |||||||| |||||||  ||||| || ||||||    
T  39153059 tatattttttgtaggcattatgttgttatgtgctattaa 39153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 14913138 - 14913279
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||  ||  ||||||| || | |||||||| ||||||||| ||||| ||||| ||| ||||| ||||  ||||||| |||| |||||    
T  14913138 ggtgttcatttgattctgatcgaaagatcaataaatcaatcaatgatttgagcatcaacattgcatattgggagg-catgtgtattccgatcaccttaat 14913236  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatatta 153  Q
    |||||||||| | |||||||  ||| ||||||| |||| |||||    
T  14913237 tttatcatat-tatttgtaggtattttgccgttgtatgctatta 14913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 31013614 - 31013480
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||||| ||||||  ||||||||||||| ||||||| | ||||  |||| | || |||| | ||||||||||| | ||||||| |||| |||||||    
T  31013614 attcaatcaatgatttggacgtcaacgttgcagattcggaag-catgtgtatttcagtgacttaagttttatcatat-tatttgtaggcattttgccgtt 31013517  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| |  ||| ||||||||||||    
T  31013516 gtatgctattaacttgggtgttgtgagtttgttcgca 31013480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 7677278 - 7677158
Alignment:
Q  54 gatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgatatta 153  Q
    ||||||||||||||||||||| || |||| | |||||||||| |||| ||||   ||||||||||| | ||||||  |||| ||||||| |||| |||||    
T  7677278 gatttgagcgtcaacgttgcagatccggaag-catgaatatttcggtgacttaggttttatcatat-tatttgtaagcattttgccgttgtatgttatta 7677181  T
Q  154 atttggatactgtaagtttgttc 176  Q
    | |||| | |||| | |||||||    
T  7677180 acttgggtgctgtgactttgttc 7677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 19876437 - 19876482
Alignment:
Q  191 ctttacgttttttagcggtgttaaatgatgtaatctctcgatttgaa 237  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||    
T  19876437 ctttacgtttt-tagcggtgttgaatgatgtaatctctcaatttgaa 19876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 35812723 - 35812784
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttg 72  Q
    ||||| |||||||||||||| |||||||| ||||||||| || ||||||  ||| |||||||    
T  35812723 gtgtttatttgattcatattgaaagatcggttattcaattaatgatttggacgttaacgttg 35812784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 8742 - 8978
Alignment:
Q  7 tttggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcacttt 106  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||  |||| |||||| |||||||||    
T  8742 tttggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcacttt 8841  T
Q  107 aattttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttag 205  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||  ||||||||| |    | | |||| ||||||  |||| |     
T  8842 aattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgcgagtttgttcac----atattcatcctttac-attttaaa 8936  T
Q  206 cggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||| |||||||||||||||||||||||| ||| |||||    
T  8937 cggtgttgaatgatgtaatctctcgatttgaatgaatgaata 8978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 16343 - 16110
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||  ||| |||||||||||||||||||    
T  16343 ggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaat 16244  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcgg 208  Q
    ||||| |||||||||||||| ||||||| ||||||||| |||||| ||||||  ||| |||||||||||     || || | ||||||| ||||||||||    
T  16243 tttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgc----tgattcttcctttacg-tttttagcgg 16149  T
Q  209 tgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||| ||||||||||| |||| ||||||| ||| |||||    
T  16148 tgttgaatgatgtaatatctcaatttgaatgaatgaata 16110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 5451 - 5621
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||| |||  |||| |||||| |||||||||||||||||||||  ||||||||||||| || |||||| |||| |||||||||| |||||||    
T  5451 tggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaa 5550  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  5551 ttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgca 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 201396 - 201163
Alignment:
Q  9 tggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaa 108  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||||| | || || ||| |||| ||||||||||||||||||    
T  201396 tggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgtagatccgtaggccatggatattccggtcactttaa 201298  T
Q  109 ttttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcg 207  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||| |||||| |||| ||| ||||| |    | | |||| ||||||  ||||||| |    
T  201297 ttttatcatatatttttgtaggcatcatgccgttatatgctattaaattggattctgtgagtatgttcac----aaattcatcctttac-atttttagtg 201203  T
Q  208 gtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||| ||||||||||||| |||||||||| ||| |||||    
T  201202 gtgttgaatgatgtaatctatcgatttgaatgaatgaata 201163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 83454 - 83227
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||| |||| ||||||||| || |||||||||||||||||||| ||    
T  83454 atttgattcatattgaaagatcgattattcaatcgaagatttggccgtcaacgttgcagattcagaggtcatggattttccggtcactttaattttacca 83355  T
Q  117 tatatttttgtag--acattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcatc-tttacgttttttagcggtgtta 213  Q
    || ||||||||||  | |||||||||||||||| |||||| ||||||  ||| |||||||||||    ||| ||||| |||||| ||||||||| | ||     
T  83354 tacatttttgtaggcatattatgccgttatatgctattaacttggatgttgtgagtttgttcgc----agattcatcatttacg-tttttagcgat-ttg 83261  T
Q  214 aatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||||||||||||||| |||||||| ||| |||||    
T  83260 aatgatgtaatctcttgatttgaatgaatgaata 83227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 6359 - 6528
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaat 109  Q
    |||||| |||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||| || |  ||| |||||||| ||||||||||||| |    
T  6359 ggtgttcatttgattcatattgaaagatcgattattcaatcaaatatttgggcatcaacgttgcagatccaaaggccatgaataatccggtcactttagt 6458  T
Q  110 tttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgca 179  Q
    |||||||||||||||||||  ||||||| ||||||||| |||||| ||||||  ||| ||||||| ||||    
T  6459 tttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgtacgca 6528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 361821 - 361589
Alignment:
Q  11 gtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaatt 110  Q
    ||||| ||||||||| ||   ||||||  ||||||||||||||||||||  ||||||||||| | || |||||| |||| ||| ||| ||||||||||||    
T  361821 gtgttcatttgattcttacagaaagattaattattcaatcaaagatttggacgtcaacgttgtagatccggaggccatggatactccagtcactttaatt 361722  T
Q  111 ttatcatatatttttgtagacattatgccgttatatgatattaatttggatactgtaagtttgttcgcacgtagactcat-ctttacgttttttagcggt 209  Q
    || |||||||||||||||| ||||||||||||||||| | |||| ||||||  ||| ||| |||||||    ||| | || ||||||| |||||||||||    
T  361721 ttctcatatatttttgtaggcattatgccgttatatgttgttaacttggatgttgtgagtgtgttcgc----agatttatcctttacg-tttttagcggt 361627  T
Q  210 gttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    ||| |||||||||||||||| || |||| ||| |||||    
T  361626 gttgaatgatgtaatctctcaatatgaatgaatgaata 361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 34796 - 34695
Alignment:
Q  17 atttgattcatattaaaagatcgattattcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatca 116  Q
    |||||||||||||| ||||||| | ||| ||||||| |||||  ||||||||||||||||| |||| | ||||| | |||| ||||||||||||||||||    
T  34796 atttgattcatattgaaagatctactatgcaatcaatgatttatgcgtcaacgttgcaaatccgga-gacatgagttttccagtcactttaattttatca 34698  T
Q  117 tat 119  Q
    |||    
T  34697 tat 34695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 58096 - 57962
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||||| | ||||||  ||||||| ||||| || |||| | ||||| ||||| ||| | ||  |||| ||||||| ||||||||| |||| |||||||    
T  58096 attcaatcgatgatttggacgtcaacattgcagatccggaag-catgagtattctggtgatttagatttcatcatat-tttttgtaggcattttgccgtt 57999  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||| |||||| |||||| |||| ||||||||||||    
T  57998 atatgctattaacttggatgctgtgagtttgttcgca 57962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 15573 - 15707
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||| ||||| || |||| | |||| ||||| |||| ||||   ||||||||||| | ||||||| |||| |||||||    
T  15573 attcaaccaatgatttggacgtcaacattgcagatccggaag-catggatatttcggtgacttaggttttatcatat-tatttgtaggcattttgccgtt 15670  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
    ||||| |||||| |||| | |||| ||||||||||||    
T  15671 atatgctattaacttgggtgctgtgagtttgttcgca 15707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 50857 - 50991
Alignment:
Q  43 attcaatcaaagatttgagcgtcaacgttgcaaattcggaggtcatgaatattccggtcactttaattttatcatatatttttgtagacattatgccgtt 142  Q
    |||||| ||| ||||||  ||||||||||||| || |||| | |||| ||||| |||| |||| | ||||||||||| | ||||||| |||| |||| ||    
T  50857 attcaaccaatgatttggacgtcaacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat-tatttgtaggcattttgccatt 50954  T
Q  143 atatgatattaatttggatactgtaagtttgttcgca 179  Q
     |||| |||||| |||| | |||| ||||||||||||    
T  50955 gtatgctattaacttgggtgctgtgagtttgttcgca 50991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 453986 - 454030
Alignment:
Q  10 ggtgttaatttgattcatattaaaagatcgattattcaatcaaag 54  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||    
T  453986 ggtgttcatttgactcatattgaaagatcgattattcaatcaaag 454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 4444 - 4492
Alignment:
Q  199 tttttagcggtgttaaatgatgtaatctctcgatttgaacgaaggaata 247  Q
    |||||||||||||| ||||||||||||||| ||||| || ||| |||||    
T  4444 tttttagcggtgttgaatgatgtaatctcttgatttaaatgaatgaata 4492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University