View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8978_low_1 (Length: 932)
Name: NF8978_low_1
Description: NF8978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8978_low_1 |
 | |
|
| [»] scaffold0697 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 868; Significance: 0; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 868; E-Value: 0
Query Start/End: Original strand, 19 - 918
Target Start/End: Original strand, 5668506 - 5669405
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5668506 |
ctagaaccattgttactcaaaacaatgtccacaaaccgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaagattattgtctttggtga |
5668605 |
T |
|
| Q |
119 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5668606 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
5668705 |
T |
|
| Q |
219 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5668706 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
5668805 |
T |
|
| Q |
319 |
tcattatacttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5668806 |
tcattatacttcaccctttttcccccacgctttccggtcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgt |
5668905 |
T |
|
| Q |
419 |
tagctgcgggtgtttctggcacctgcgactcaaaattctcatcatcatcattcaaattaattcttgatccgccctcttgtgttgattgaacattttcctt |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5668906 |
tagctgcgggtgtttctggcacctgcgactcaaaattctcatcatcataattcaaattaattcttgatccgccctcttgtgttgattgaacattttcctt |
5669005 |
T |
|
| Q |
519 |
ctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatggt |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5669006 |
ctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatggt |
5669105 |
T |
|
| Q |
619 |
tttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatcaccatgaattcatcaa |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
5669106 |
tttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaattatcatgaatttatcaa |
5669205 |
T |
|
| Q |
719 |
ttgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaaccacttg |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5669206 |
ttgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaaccacttg |
5669305 |
T |
|
| Q |
819 |
cacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacctcggaa |
918 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5669306 |
cacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacctgggaa |
5669405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 74 - 339
Target Start/End: Original strand, 33321928 - 33322191
Alignment:
| Q |
74 |
tatccattgtgaaaaaatagtcgcaaaggttattgtctttggtgataagcataccagccattacca-cttctgcatcagacaatccttcaatttctttta |
172 |
Q |
| |
|
||||||| |||||||||||| | ||||| |||||||||||| |||||||||||||| |||||||| |||| ||| |||||||||| || |||||| |
|
|
| T |
33321928 |
tatccatagtgaaaaaatagcctcaaagtttattgtctttgatgataagcataccaatcattaccaacttcagcagtgaacaatccttctatatcttttt |
33322027 |
T |
|
| Q |
173 |
aaatagagacaatttggttcctcctatcagctgtgtgtttttcgtgcacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaat |
272 |
Q |
| |
|
||||||||||||| ||||||| | ||| |||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33322028 |
aaatagagacaatctggttccgcatattagctatgtgtttctcgtgcacaaaacaataagtgaagacttgtttcatattctcaacaccgttagcataaat |
33322127 |
T |
|
| Q |
273 |
ctcacccaatttgttcaatgaatttgacatgctatcagaagcatcatcattatacttcacccttttt |
339 |
Q |
| |
|
||||||| | ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
33322128 |
ctcacccgacttgttcaatgaatttgatatgct---agaaccatcatcattatacttcacccttttt |
33322191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 848; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 848; E-Value: 0
Query Start/End: Original strand, 19 - 918
Target Start/End: Original strand, 13338971 - 13339870
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13338971 |
ctagaaccattgttactcaaaacaatgtccacaaaccgcttccttaatccaggagtatccattgtgaaaaaatagtcgcaaagattattgtctttggtga |
13339070 |
T |
|
| Q |
119 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
218 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13339071 |
taaacataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
13339170 |
T |
|
| Q |
219 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13339171 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
13339270 |
T |
|
| Q |
319 |
tcattatacttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
13339271 |
tcattatacttcaccctttttcccccacactttccggtcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtaatgt |
13339370 |
T |
|
| Q |
419 |
tagctgcgggtgtttctggcacctgcgactcaaaattctcatcatcatcattcaaattaattcttgatccgccctcttgtgttgattgaacattttcctt |
518 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13339371 |
tagatgcgggtgtttctggcacctgcgactcaaaattctcatcatcataattcaaattaattcttgatccgccctcttgtgttgattgaacattttcctt |
13339470 |
T |
|
| Q |
519 |
ctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatggt |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13339471 |
ctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatggt |
13339570 |
T |
|
| Q |
619 |
tttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatcaccatgaattcatcaa |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
13339571 |
tttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaattatcatgaatttatcaa |
13339670 |
T |
|
| Q |
719 |
ttgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaaccacttg |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13339671 |
ttgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaaccacttg |
13339770 |
T |
|
| Q |
819 |
cacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacctcggaa |
918 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13339771 |
cacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacctgggaa |
13339870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 735; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 735; E-Value: 0
Query Start/End: Original strand, 19 - 918
Target Start/End: Complemental strand, 10641240 - 10640335
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10641240 |
ctagaaccattgttactcaaaacaatgtccacaaaccgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtga |
10641141 |
T |
|
| Q |
119 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10641140 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttctcgtg |
10641041 |
T |
|
| Q |
219 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
318 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10641040 |
cacaaaacaagaagtgaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcataagcatca |
10640941 |
T |
|
| Q |
319 |
tcattatacttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgt |
418 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||| | || ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
10640940 |
tcgttatacttcacccttttccccccacgctttctggtcctataattagtagaatcacgttgtggctggtttgttggatttgaacccggagcagtagtgt |
10640841 |
T |
|
| Q |
419 |
tagctgcgggtgtttctggcacctgcgactcaaaattctcatcatca------tcattcaaattaattcttgatccgccctcttgtgttgattgaacatt |
512 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
10640840 |
tagctgtgggtgtttctggcatctgcgactcaaaattctcatcatcatcatcatcattcaaattaattcctgatccaccctcttgtgttgattgaacatt |
10640741 |
T |
|
| Q |
513 |
ttccttctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtgga |
612 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10640740 |
ttccttctccatctcaatagtcatatcaatgatatcttctgttacagtatcaactgctttatcttttccaaatacaatatccaagctatcatagtgtgga |
10640641 |
T |
|
| Q |
613 |
aatggttttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatcaccatgaatt |
712 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
10640640 |
aatggtttgttatacaagccaactgcggtagggtgagactgcattaaaggaaaaattgtttagaaatataaatttaatgcaagaaaaattatcatgaatt |
10640541 |
T |
|
| Q |
713 |
catcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaac |
812 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| |
|
|
| T |
10640540 |
tatcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactttaatcatctttttagcatcatcccacccaaaac |
10640441 |
T |
|
| Q |
813 |
cacttgcacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacc |
912 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10640440 |
cacttgcccctggacccaacatatctttgattgcagaatattgtcttttaagcaatttcactcttgattcaatatgtggggtagcttttagtgtgcaacc |
10640341 |
T |
|
| Q |
913 |
tcggaa |
918 |
Q |
| |
|
| |||| |
|
|
| T |
10640340 |
tgggaa |
10640335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 694; E-Value: 0
Query Start/End: Original strand, 26 - 918
Target Start/End: Original strand, 32714374 - 32715275
Alignment:
| Q |
26 |
cattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtgataagcat |
125 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32714374 |
cattgttactcaaaacgatgtccacaaaccgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtgataagcat |
32714473 |
T |
|
| Q |
126 |
accagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtgcacaaaa |
225 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
32714474 |
accagccattaccacttctgcatcagacagtccttcaatttcttttaaaatagagacaatctggttcctcctatcagctgtgtgtttctcgtgcacaaaa |
32714573 |
T |
|
| Q |
226 |
caagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatcatcattat |
325 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32714574 |
caagaagtgaagacgtgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatcatcgttat |
32714673 |
T |
|
| Q |
326 |
acttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgttagctgc |
425 |
Q |
| |
|
||||||||||||| ||||||||||||| | |||||| |||||||||||||| | | || ||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
32714674 |
acttcacccttttccccccacgctttctggtcctataattagtagaatcacattgtggctggtttgttggatttgaacccggagcagtagtgttagctgt |
32714773 |
T |
|
| Q |
426 |
gggtgtttctggcacctgcgactcaaaattctcat---------catcatcattcaaattaattcttgatccgccctcttgtgttgattgaacattttcc |
516 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
32714774 |
gggtgtttctggcatctgcgactcaaaattctcatcatcatcatcatcatcattcaaattaattcctgatccaccctcttgtgttgattgaacattttcc |
32714873 |
T |
|
| Q |
517 |
ttctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatg |
616 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
32714874 |
ttctccatctcaatagtcatatcaatgatatcttctgttacagtaccagctgctttatcttttccaaatacaatatccaagctatcatagtgtggaaatg |
32714973 |
T |
|
| Q |
617 |
gttttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatcaccatgaattcatc |
716 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||||||||||||||||| |||||| | |||||||| ||| |
|
|
| T |
32714974 |
gtttgttatacaagccaactgcggtagagtgagactgcattaaagaaaaaattgtttagaaatataaatttaatgcaagaaaaattatcatgaatttatc |
32715073 |
T |
|
| Q |
717 |
aattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaaccact |
816 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
32715074 |
aattgtggaatagtacatcttatattaccttgcaccattgacgataaatctccttctctactttaatcatctttttagcatcatcccacccaaaaccact |
32715173 |
T |
|
| Q |
817 |
tgcacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacctcgg |
916 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| || |
|
|
| T |
32715174 |
tgcccctggacccaacatatctttgattgcagaatattgtcttttaagcaatttcactcttgattcaatatgtggtgtagcttttagtgtgcaacctggg |
32715273 |
T |
|
| Q |
917 |
aa |
918 |
Q |
| |
|
|| |
|
|
| T |
32715274 |
aa |
32715275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 734; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 734; E-Value: 0
Query Start/End: Original strand, 19 - 913
Target Start/End: Complemental strand, 26665041 - 26664142
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtga |
118 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
26665041 |
ctagaaccattgttactcaaa-caatgtccacaaaccgcttcctcaatccaggagtatccattatgaaaaaatagtcgcaaaggttattgtctttggtga |
26664943 |
T |
|
| Q |
119 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26664942 |
taagcataccagccattaccacttctgcatcagacagtccttcaatttcttttaaaatagagacaatctggttcctcctatcagctgtgtgtttctcgtg |
26664843 |
T |
|
| Q |
219 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26664842 |
cacaaaacaagaagtgaagacttgtttcatattctcaacaccataagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
26664743 |
T |
|
| Q |
319 |
tcattatacttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgt |
418 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | | ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
26664742 |
tcgttatacttcaccctttttcccccacgctttccggtcctataattagtagaatcacgttgtgactggtttgttggatttgaacccggagcagtagtgt |
26664643 |
T |
|
| Q |
419 |
tagctgcgggtgtttctggcacctgcgactcaaaattctca------tcatcatcattcaaattaattcttgatccgccctcttgtgttgattgaacatt |
512 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26664642 |
tagctgtgggtgtttctggcatctgcgactcaaaattctcagcatcatcatcatcattcaaattaattcctgatccgccctcttgtgttgattgaacatt |
26664543 |
T |
|
| Q |
513 |
ttccttctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtgga |
612 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26664542 |
ttccttctccatctcaatagtcatatcaatgatatcttctgttacagtaccagctgctttatcttttccaaatacagtatccaagctatcatagtgtgga |
26664443 |
T |
|
| Q |
613 |
aatggttttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatcaccatgaatt |
712 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
26664442 |
aatggtttttcatacaaaccaactgcggtagggtgagactgcattaaaggaaaaattgtttagaaatataaatttaatgcaagaaaaattatcatgaatt |
26664343 |
T |
|
| Q |
713 |
catcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaac |
812 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
26664342 |
tatcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactttaatcatctttttagcatcattccacccaaaac |
26664243 |
T |
|
| Q |
813 |
cacttgcacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacc |
912 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26664242 |
cacttgcacctggacccaacatatctttgattgcagaatactgtcttttaagcagtttcactcttgattcaatatgcagggtagcttttagtgtgcaacc |
26664143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0697 (Bit Score: 723; Significance: 0; HSPs: 1)
Name: scaffold0697
Description:
Target: scaffold0697; HSP #1
Raw Score: 723; E-Value: 0
Query Start/End: Original strand, 19 - 918
Target Start/End: Original strand, 3715 - 4619
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaa-tagtcgcaaaggttattgtctttggtg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3715 |
ctagaaccattgttactcaaaacaatgtccacaaaccgcttcctcaatccaggagtatccattgtgaaaaaaatagtcgcaaaggttattgtctttggtg |
3814 |
T |
|
| Q |
118 |
ataagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgt |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | |
|
|
| T |
3815 |
ataagcataccagccattaccacttctgcatcagacagtccttcaatttcttttaaaatagagacaatctggttcctcctatcagctgtgtgtttctcat |
3914 |
T |
|
| Q |
218 |
gcacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatc |
317 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3915 |
gcacaaaacaagaagtgaagacttgtttcatattctcaataccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatc |
4014 |
T |
|
| Q |
318 |
atcattatacttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttgg-tttgttagatttgatcccggagcagtagt |
416 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | || ||| |||| | ||||||| |||||||||||||| |
|
|
| T |
4015 |
atcgttatacttcaccctttttcccccacgctttccggtcctataattagtagaatcacgttgtggctgggtttgatggatttgaacccggagcagtagt |
4114 |
T |
|
| Q |
417 |
gttagctgcgggtgtttctggcacctgcgactcaaaattctca---tcatcatcattcaaattaattcttgatccgccctcttgtgttgattgaacattt |
513 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4115 |
gttagctgtgggtgtttctggcatctgcgactcaaaattctcagcatcatcatcattcaaactaattcctgatccgccctcttgtgttgattgaacattt |
4214 |
T |
|
| Q |
514 |
tccttctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgtggaa |
613 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4215 |
tccttctccatctcaatagtcatatcaatgatatcttctgttacagtaccagctgctttatcttttccaaatacagtatctaagctatcatagtgtggaa |
4314 |
T |
|
| Q |
614 |
atggttttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatcaccatgaattc |
713 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
4315 |
atggttttttatacaaaccaactgcggtagggtgagactgcattaaaggaaaaattgtttagaaatataaatttaatgcaagaaaaattatcatgaattt |
4414 |
T |
|
| Q |
714 |
atcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaacc |
813 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
4415 |
atcaattgtggaatagtatatcttatattaccttgcaccattgatgataaatctccttctctactttaatcatctttttagcatcattccacccaaaacc |
4514 |
T |
|
| Q |
814 |
acttgcacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgcaacct |
913 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4515 |
acttgcacctggacccaacatatctttgattgcagaatattgtcttttaaaaagtttcactcttgattcaatatgtggggtagcttttagtgtgcaacct |
4614 |
T |
|
| Q |
914 |
cggaa |
918 |
Q |
| |
|
|||| |
|
|
| T |
4615 |
gggaa |
4619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 720; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 720; E-Value: 0
Query Start/End: Original strand, 19 - 918
Target Start/End: Complemental strand, 22905308 - 22904394
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22905308 |
ctagaaccattgttactcaaaacaatgtccacaaaccgcttcctcaatccaggagtatccattgtgaaaaaatagtctcaaaggttattgtctttggtga |
22905209 |
T |
|
| Q |
119 |
taagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtg |
218 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |
|
|
| T |
22905208 |
taagcataccagccattagcacttctgcatcagaaagtccttcaatttcttttaaaatagagacaatctggttactcctatcagctgtgtgtttctcgtg |
22905109 |
T |
|
| Q |
219 |
cacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22905108 |
cacaaaacaagaagtgaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatca |
22905009 |
T |
|
| Q |
319 |
tcattatacttcaccctttttcccccacgctttccgatcctatgattagtagaatcacgtggaggttggtttgttagatttgatcccggagcagtagtgt |
418 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| | || ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
22905008 |
tcgttatacttcaccctttttcccccacgctttctggtcctataattagtagaatcacgttgtggctggtttgttggatttgaacccggagcagtagtgt |
22904909 |
T |
|
| Q |
419 |
tagctgcgggtgtttctggcacctgcgactcaaaattctcatcatca---------tcattcaaattaattcttgatccgccctcttgtgttgattgaac |
509 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22904908 |
tagctgtgggtgtttctggcatctgcgactcaaaattctcatcatcatcatcatcatcattcaaattaattcttgatccgccctcttgtgttgattgaac |
22904809 |
T |
|
| Q |
510 |
attttccttctccatctcaatggtcatatcaatgatatcttctgttacactaccatctgctttatcttttccaaatacagtatccaagctatcatagtgt |
609 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22904808 |
attttccttctccatctcaatagtcatatcaatgatatcttctgttacagtaccagctgctttatcttttccaaatacaatatccaagctatcatagtgt |
22904709 |
T |
|
| Q |
610 |
ggaaatggttttttatacaagccaact------gcggtagggtgagactgcgttaaaggaaaaagtgtttagaaatataaatttaatgcaataaaaatca |
703 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||| | |
|
|
| T |
22904708 |
ggaaatggtttgttatacaagccaactgcggtagcggtagggtgagactgcattaaaggaaaaattgtttagaaatataaatttaatgcaagaaaaatta |
22904609 |
T |
|
| Q |
704 |
ccatgaattcatcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattcc |
803 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |
|
|
| T |
22904608 |
tcatgaatttatcaattgtggaatagtatatcttatattaccttgcaccattgacgataaatctccttctatactttaatcatctttttagcatcattcc |
22904509 |
T |
|
| Q |
804 |
acccaaaaccacttgcacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttag |
903 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22904508 |
acccaaaaccacttgcacctggacccaacatatctttgattgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttag |
22904409 |
T |
|
| Q |
904 |
tgtgcaacctcggaa |
918 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
22904408 |
tgtgcaacctgggaa |
22904394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 338
Target Start/End: Original strand, 21532757 - 21533077
Alignment:
| Q |
19 |
ctagaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaa-aatagtcgcaaaggttattgtctttggtg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21532757 |
ctagaaccattgttactcaaaacaatgtccacaaaccgcttcctcaatccaggagtatccattgtgaaaaaaatagtcgcaaaggttattgtctttggtg |
21532856 |
T |
|
| Q |
118 |
ataagcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgt |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | |
|
|
| T |
21532857 |
ataagcataccagccattaccacttctgcatcagacagtccttcaatttcttttaaaatagagacaatctggttcctcctatcagctgtgtgtttctcat |
21532956 |
T |
|
| Q |
218 |
gcacaaaacaagaagtaaagacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatc |
317 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21532957 |
gcacaaaacaagaagtgaagacttgtttcatattctcaataccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatc |
21533056 |
T |
|
| Q |
318 |
atcattatacttcaccctttt |
338 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
21533057 |
atcgttatacttcaccctttt |
21533077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 98; Significance: 9e-48; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 20320475 - 20320266
Alignment:
| Q |
21 |
agaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtgata |
120 |
Q |
| |
|
|||||||||||| | |||||||||| |||||| | |||| | | | ||||||||||||| |||||||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
20320475 |
agaaccattgttttttaaaacaatgtgcacaaattccttcttaagttcaggagtatccatagtgaaaaagtagtcacaaaggttattgtctttagtgata |
20320376 |
T |
|
| Q |
121 |
agcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtgca |
220 |
Q |
| |
|
| |||||||||| ||||||| || || | ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| | || ||||||| |
|
|
| T |
20320375 |
accataccagcccttaccacatcaacagcggacaatccttctatttcttttaaaagagagacaacttggttcctcctatcagctgtgagcttctcgtgca |
20320276 |
T |
|
| Q |
221 |
caaaacaaga |
230 |
Q |
| |
|
||||||||| |
|
|
| T |
20320275 |
taaaacaaga |
20320266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 34151220 - 34151011
Alignment:
| Q |
21 |
agaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtgata |
120 |
Q |
| |
|
|||||||||||| | |||||||||| |||||| | |||| | | | ||||||||||||| |||||||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
34151220 |
agaaccattgttttttaaaacaatgtgcacaaattccttcttaagttcaggagtatccatagtgaaaaagtagtcacaaaggttattgtctttagtgata |
34151121 |
T |
|
| Q |
121 |
agcataccagccattaccacttctgcatcagacaatccttcaatttcttttaaaatagagacaatttggttcctcctatcagctgtgtgtttttcgtgca |
220 |
Q |
| |
|
| |||||||||| ||||||| || || | ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| | || ||||||| |
|
|
| T |
34151120 |
accataccagcccttaccacatcaacagcggacaatccttctatttcttttaaaagagagacaacttggttcctcctatcagctgtgagcttctcgtgca |
34151021 |
T |
|
| Q |
221 |
caaaacaaga |
230 |
Q |
| |
|
||||||||| |
|
|
| T |
34151020 |
taaaacaaga |
34151011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 743 - 909
Target Start/End: Complemental strand, 34150500 - 34150334
Alignment:
| Q |
743 |
accttgcaccattgacgataaatctccttctctactataatcatcttttcagcatcattccacccaaaaccacttgcacctggacccaacatatctttga |
842 |
Q |
| |
|
|||||||||||||| | |||| ||||||||||||| |||| |||| |||||||||||| |||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
34150500 |
accttgcaccattgtctgtaaacttccttctctactacaatcgtcttcgtagcatcattccatccaaaaccacttgcacttggacccaacatatctctga |
34150401 |
T |
|
| Q |
843 |
ttgcagaatattgtcttttaagcagtttcactcttgattcaatatgcggggtagcttttagtgtgca |
909 |
Q |
| |
|
|||| ||||| ||| ||| || ||||||||||||||||||| || || ||||||||| |||||| |
|
|
| T |
34150400 |
ttgctgaataatgtgatttcagacgtttcactcttgattcaatgtgaggattagcttttaatgtgca |
34150334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 52181202 - 52181313
Alignment:
| Q |
21 |
agaaccattgttactcaaaacaatgtccacaaactgcttcctcaatccaggagtatccattgtgaaaaaatagtcgcaaaggttattgtctttggtgata |
120 |
Q |
| |
|
||||||||| || ||||||||||| | |||||| | ||||||||| || |||||||| |||||||||| |||| || || || |||||||| |||||| |
|
|
| T |
52181202 |
agaaccattattgctcaaaacaatcttcacaaattccttcctcaactcaaaagtatccagtgtgaaaaaaaagtcacagagattgttgtcttttgtgata |
52181301 |
T |
|
| Q |
121 |
agcataccagcc |
132 |
Q |
| |
|
|||||||||||| |
|
|
| T |
52181302 |
agcataccagcc |
52181313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 567 - 666
Target Start/End: Complemental strand, 20319935 - 20319836
Alignment:
| Q |
567 |
tgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatggttttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaa |
666 |
Q |
| |
|
|||||||||||||||||||||||||| ||| || |||||||| |||||||||||| | |||||||| ||| |||| || |||||| |||||| |||| |
|
|
| T |
20319935 |
tgctttatcttttccaaatacagtatgcaatctctcatagtgaggaaatggttttccaaacaagccagttgcattaggatgggactgcattaaagtaaaa |
20319836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 567 - 666
Target Start/End: Complemental strand, 34150680 - 34150581
Alignment:
| Q |
567 |
tgctttatcttttccaaatacagtatccaagctatcatagtgtggaaatggttttttatacaagccaactgcggtagggtgagactgcgttaaaggaaaa |
666 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| || |||||||| |||||||||||| | |||||||| ||| |||| || |||||| |||||| |||| |
|
|
| T |
34150680 |
tgctttatcttttccaaatacattatgcaatctctcatagtgaggaaatggttttccaaacaagccagttgcattaggatgggactgcattaaagtaaaa |
34150581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 236 - 353
Target Start/End: Original strand, 52181419 - 52181536
Alignment:
| Q |
236 |
agacttgtttcatattctcaacaccattagcataaatctcacccaatttgttcaatgaatttgacatgctatcagaagcatcatcattatacttcaccct |
335 |
Q |
| |
|
||| |||||||||| | ||||||| ||||||||| |||||| || ||||||||||| || | | ||||||| || ||||||||||||| || || || |
|
|
| T |
52181419 |
agagttgtttcatactttcaacactgctagcataaaactcaccaaacttgttcaatgaggttaataagctatcaaaaacatcatcattatattttactct |
52181518 |
T |
|
| Q |
336 |
ttttcccccacgctttcc |
353 |
Q |
| |
|
||| | |||||| ||||| |
|
|
| T |
52181519 |
tttactcccacgttttcc |
52181536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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