View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8978_low_2 (Length: 857)

Name: NF8978_low_2
Description: NF8978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8978_low_2
NF8978_low_2
[»] chr8 (37 HSPs)
chr8 (338-829)||(44859310-44859792)
chr8 (13-323)||(44859869-44860178)
chr8 (518-563)||(41225717-41225762)
chr8 (520-560)||(10970266-10970306)
chr8 (518-562)||(29108660-29108704)
chr8 (517-635)||(24074503-24074622)
chr8 (520-559)||(34797138-34797177)
chr8 (518-560)||(4798596-4798638)
chr8 (518-635)||(7649527-7649644)
chr8 (518-560)||(9524955-9524997)
chr8 (518-560)||(15042420-15042462)
chr8 (518-560)||(17987504-17987546)
chr8 (518-560)||(23857379-23857421)
chr8 (518-560)||(24608538-24608580)
chr8 (518-560)||(28465616-28465658)
chr8 (518-560)||(39484425-39484467)
chr8 (519-560)||(43847701-43847742)
chr8 (518-562)||(34073292-34073336)
chr8 (518-562)||(35556439-35556483)
chr8 (518-562)||(43468758-43468802)
chr8 (519-562)||(25689441-25689484)
chr8 (519-562)||(42688055-42688098)
chr8 (591-633)||(8740637-8740679)
chr8 (589-631)||(13537294-13537336)
chr8 (589-631)||(13626842-13626884)
chr8 (518-560)||(17980280-17980322)
chr8 (518-560)||(27558925-27558967)
chr8 (589-635)||(28378883-28378929)
chr8 (589-631)||(33570412-33570454)
chr8 (589-635)||(36359697-36359743)
chr8 (518-560)||(40249935-40249977)
chr8 (591-633)||(44070349-44070391)
chr8 (515-560)||(7603726-7603771)
chr8 (518-559)||(9737416-9737457)
chr8 (518-559)||(25689503-25689544)
chr8 (519-560)||(26703945-26703986)
chr8 (515-560)||(42761920-42761965)
[»] chr3 (32 HSPs)
chr3 (516-633)||(335011-335129)
chr3 (518-559)||(54983765-54983806)
chr3 (518-562)||(49639026-49639070)
chr3 (521-635)||(14417869-14417984)
chr3 (518-560)||(33206755-33206797)
chr3 (519-560)||(34503214-34503255)
chr3 (519-560)||(40786279-40786320)
chr3 (590-635)||(42909182-42909227)
chr3 (520-560)||(8958363-8958403)
chr3 (518-562)||(13540017-13540061)
chr3 (518-562)||(45713478-45713522)
chr3 (518-562)||(48173284-48173328)
chr3 (518-562)||(50720420-50720464)
chr3 (518-562)||(50792384-50792428)
chr3 (520-560)||(51399950-51399990)
chr3 (525-635)||(36727442-36727552)
chr3 (518-560)||(16278006-16278048)
chr3 (518-560)||(17440020-17440062)
chr3 (514-560)||(19117452-19117498)
chr3 (518-560)||(24751315-24751357)
chr3 (589-635)||(31698603-31698649)
chr3 (518-560)||(32665279-32665321)
chr3 (520-562)||(34136763-34136805)
chr3 (518-560)||(35483267-35483309)
chr3 (518-560)||(42271068-42271110)
chr3 (518-560)||(42832111-42832153)
chr3 (518-560)||(43566851-43566893)
chr3 (593-635)||(54983684-54983726)
chr3 (519-560)||(8475414-8475455)
chr3 (590-635)||(8959520-8959565)
chr3 (590-635)||(37059518-37059563)
chr3 (519-560)||(41121870-41121911)
[»] chr7 (37 HSPs)
chr7 (518-635)||(29710080-29710197)
chr7 (518-635)||(45198077-45198195)
chr7 (518-560)||(36316029-36316071)
chr7 (518-633)||(25818284-25818400)
chr7 (514-553)||(22380488-22380527)
chr7 (518-560)||(29778979-29779021)
chr7 (518-635)||(34948104-34948222)
chr7 (514-560)||(46716327-46716373)
chr7 (518-560)||(49012396-49012438)
chr7 (518-559)||(8195913-8195954)
chr7 (518-635)||(47403567-47403683)
chr7 (519-560)||(47552212-47552253)
chr7 (520-560)||(4590661-4590701)
chr7 (518-562)||(7263051-7263095)
chr7 (520-560)||(22047520-22047560)
chr7 (518-562)||(32387178-32387222)
chr7 (520-560)||(34962027-34962067)
chr7 (517-560)||(2261539-2261582)
chr7 (521-560)||(17900934-17900973)
chr7 (513-560)||(22966013-22966060)
chr7 (521-560)||(27047770-27047809)
chr7 (515-562)||(36176866-36176913)
chr7 (524-562)||(924345-924383)
chr7 (518-560)||(4818018-4818060)
chr7 (520-562)||(14967687-14967729)
chr7 (520-562)||(15397163-15397205)
chr7 (518-560)||(22741201-22741243)
chr7 (589-631)||(22741275-22741317)
chr7 (518-560)||(30644167-30644209)
chr7 (589-635)||(33202533-33202579)
chr7 (518-560)||(38778734-38778776)
chr7 (518-560)||(44437880-44437922)
chr7 (518-559)||(21925473-21925514)
chr7 (589-634)||(35890870-35890915)
chr7 (518-563)||(35919723-35919768)
chr7 (586-635)||(38025408-38025457)
chr7 (518-555)||(45197316-45197353)
[»] chr1 (40 HSPs)
chr1 (515-635)||(4429461-4429582)
chr1 (515-560)||(8261730-8261775)
chr1 (518-563)||(36164660-36164705)
chr1 (518-562)||(29442020-29442064)
chr1 (589-635)||(9527496-9527542)
chr1 (518-560)||(18923940-18923982)
chr1 (519-620)||(28916912-28917014)
chr1 (518-560)||(29331219-29331261)
chr1 (518-635)||(34560317-34560434)
chr1 (518-560)||(38020003-38020045)
chr1 (518-559)||(12073133-12073174)
chr1 (519-560)||(43555929-43555970)
chr1 (511-635)||(749566-749690)
chr1 (518-562)||(3533026-3533070)
chr1 (520-560)||(4354160-4354200)
chr1 (591-635)||(12866196-12866240)
chr1 (518-562)||(15774365-15774409)
chr1 (518-558)||(22346418-22346458)
chr1 (520-560)||(33059547-33059587)
chr1 (518-562)||(38851633-38851677)
chr1 (519-562)||(8364461-8364504)
chr1 (513-560)||(21884568-21884615)
chr1 (511-554)||(23990322-23990365)
chr1 (518-560)||(5172657-5172699)
chr1 (518-556)||(9408673-9408711)
chr1 (589-635)||(11405526-11405572)
chr1 (589-635)||(15774291-15774337)
chr1 (518-560)||(20357458-20357500)
chr1 (518-560)||(20562455-20562497)
chr1 (518-560)||(23930599-23930641)
chr1 (518-560)||(24661980-24662022)
chr1 (518-560)||(27745155-27745197)
chr1 (589-635)||(35593833-35593879)
chr1 (518-560)||(37490888-37490930)
chr1 (518-560)||(42831945-42831987)
chr1 (518-560)||(46116229-46116271)
chr1 (518-560)||(49010755-49010797)
chr1 (593-635)||(49916514-49916556)
chr1 (517-562)||(24168632-24168677)
chr1 (513-562)||(49606751-49606800)
[»] chr2 (34 HSPs)
chr2 (515-635)||(38820570-38820690)
chr2 (515-560)||(10207640-10207685)
chr2 (518-635)||(20122454-20122572)
chr2 (516-636)||(36072548-36072669)
chr2 (515-560)||(36481064-36481109)
chr2 (520-560)||(25050295-25050335)
chr2 (518-560)||(580838-580880)
chr2 (589-635)||(29664673-29664719)
chr2 (518-560)||(30474250-30474292)
chr2 (519-560)||(22297507-22297548)
chr2 (518-562)||(2114488-2114532)
chr2 (518-562)||(8234845-8234889)
chr2 (518-562)||(15392264-15392308)
chr2 (518-562)||(36520833-36520877)
chr2 (518-562)||(41711689-41711733)
chr2 (519-562)||(9791948-9791991)
chr2 (589-632)||(25777527-25777570)
chr2 (517-560)||(26807139-26807182)
chr2 (515-562)||(36426909-36426956)
chr2 (523-621)||(44950909-44951008)
chr2 (518-560)||(1836586-1836628)
chr2 (518-560)||(7086251-7086293)
chr2 (589-635)||(9547106-9547152)
chr2 (518-560)||(10262737-10262779)
chr2 (518-560)||(15690089-15690131)
chr2 (518-560)||(18364430-18364472)
chr2 (518-560)||(31564093-31564135)
chr2 (514-560)||(44422101-44422147)
chr2 (521-562)||(16762841-16762882)
chr2 (523-560)||(24034108-24034145)
chr2 (521-562)||(31956867-31956908)
chr2 (519-560)||(34620517-34620558)
chr2 (515-560)||(36665425-36665470)
chr2 (519-560)||(41699101-41699142)
[»] chr6 (22 HSPs)
chr6 (518-636)||(6025365-6025483)
chr6 (518-635)||(30566056-30566174)
chr6 (518-631)||(32057032-32057146)
chr6 (519-635)||(12127888-12128005)
chr6 (508-560)||(19642602-19642654)
chr6 (520-625)||(6296897-6297003)
chr6 (520-625)||(6303707-6303813)
chr6 (518-560)||(12089095-12089137)
chr6 (589-635)||(22389729-22389775)
chr6 (518-560)||(22389805-22389847)
chr6 (515-560)||(5288400-5288445)
chr6 (521-562)||(31741516-31741557)
chr6 (518-562)||(9491788-9491832)
chr6 (521-560)||(22501019-22501058)
chr6 (518-556)||(7563635-7563673)
chr6 (518-560)||(10377179-10377221)
chr6 (522-560)||(11982764-11982802)
chr6 (518-560)||(21507256-21507298)
chr6 (519-560)||(7392537-7392578)
chr6 (518-559)||(8233084-8233125)
chr6 (521-562)||(15126244-15126285)
chr6 (525-562)||(20716445-20716482)
[»] chr4 (36 HSPs)
chr4 (518-635)||(33944342-33944460)
chr4 (515-618)||(35803089-35803193)
chr4 (514-560)||(32885682-32885728)
chr4 (515-560)||(12856179-12856224)
chr4 (518-562)||(20753178-20753222)
chr4 (515-562)||(20181206-20181253)
chr4 (514-560)||(3544487-3544533)
chr4 (510-560)||(5430420-5430470)
chr4 (518-560)||(47018001-47018043)
chr4 (518-560)||(50657878-50657920)
chr4 (589-635)||(51536929-51536975)
chr4 (518-560)||(53291440-53291482)
chr4 (518-630)||(31152516-31152629)
chr4 (519-560)||(35031382-35031423)
chr4 (520-635)||(17859778-17859894)
chr4 (518-621)||(24234067-24234171)
chr4 (521-560)||(52608622-52608661)
chr4 (518-560)||(548942-548984)
chr4 (589-635)||(2487357-2487403)
chr4 (518-560)||(4722519-4722561)
chr4 (518-560)||(9172426-9172468)
chr4 (518-560)||(9285714-9285756)
chr4 (589-635)||(10098195-10098241)
chr4 (518-560)||(21476136-21476178)
chr4 (518-560)||(31578017-31578059)
chr4 (518-560)||(46735024-46735066)
chr4 (518-560)||(50783489-50783531)
chr4 (518-560)||(52560762-52560804)
chr4 (518-560)||(52743226-52743268)
chr4 (518-560)||(55266490-55266532)
chr4 (518-560)||(56546504-56546546)
chr4 (524-561)||(3442847-3442884)
chr4 (514-563)||(20955492-20955541)
chr4 (521-562)||(33536226-33536267)
chr4 (533-562)||(35112721-35112750)
chr4 (590-635)||(52560835-52560880)
[»] scaffold1086 (1 HSPs)
scaffold1086 (518-635)||(2486-2604)
[»] scaffold0008 (1 HSPs)
scaffold0008 (520-635)||(43676-43791)
[»] chr5 (27 HSPs)
chr5 (520-635)||(29096287-29096403)
chr5 (518-560)||(7645157-7645199)
chr5 (518-560)||(18872519-18872561)
chr5 (518-560)||(27219618-27219660)
chr5 (513-621)||(14487554-14487663)
chr5 (519-560)||(18478002-18478043)
chr5 (518-621)||(21017596-21017703)
chr5 (519-560)||(29841347-29841388)
chr5 (515-559)||(26302549-26302593)
chr5 (542-621)||(30622281-30622361)
chr5 (519-562)||(6014778-6014821)
chr5 (589-636)||(21212964-21213011)
chr5 (521-560)||(27440353-27440392)
chr5 (588-635)||(29331312-29331359)
chr5 (590-636)||(6014850-6014896)
chr5 (518-560)||(19059059-19059101)
chr5 (518-560)||(22599990-22600032)
chr5 (589-631)||(23925613-23925655)
chr5 (522-560)||(29050802-29050840)
chr5 (518-560)||(29329021-29329063)
chr5 (518-560)||(33800891-33800933)
chr5 (518-560)||(36888148-36888190)
chr5 (518-560)||(40339154-40339196)
chr5 (518-560)||(42801496-42801538)
chr5 (590-635)||(6671765-6671810)
chr5 (519-560)||(20699480-20699521)
chr5 (533-562)||(38426813-38426842)
[»] scaffold0039 (1 HSPs)
scaffold0039 (518-560)||(101829-101871)
[»] scaffold0191 (1 HSPs)
scaffold0191 (522-560)||(16849-16887)
[»] scaffold0044 (1 HSPs)
scaffold0044 (589-635)||(49890-49936)


Alignment Details
Target: chr8 (Bit Score: 343; Significance: 0; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 338 - 829
Target Start/End: Complemental strand, 44859792 - 44859310
Alignment:
Q  338 tttccttttggagcaaaacatgtaagtgaataggaaataaataagtagaaacactatagaaaaagacaaatgaaactgaaagtcaactaaattgaaaatt 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44859792 tttccttttggagcaaaacatgtaagtgaataggaaataaataagtagaaacactatagaaaaagacaaatgaaactgaaagtcaactaaattgaaaatt 44859693  T
Q  438 tgaagtcttgagacgtgtacccggaggatatcatatcccctccactgcatacagccaaataaataggtaaatatagagttccgtgagcatagctaagttg 537  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         | ||  |  ||||||||||||||||||    
T  44859692 tgaagtcttgagacgtgtacccggaggatatcatatcccctccactgcatacagccaaataaat---------ttgaagttagtgagcatagctaagttg 44859602  T
Q  538 gtaggataatgcattattatatgtaatgactgaaatttgaacctcgaaattccacttattcatcttatgaggtgaattctagccgctaaactacctgatn 637  Q
     |||||||||||||||||||||| ||||| |||||||||||||||||||   |||||||| ||||||||||||||||| || ||||||||||||||||      
T  44859601 ataggataatgcattattatatgcaatgattgaaatttgaacctcgaaacctcacttatttatcttatgaggtgaattttaaccgctaaactacctgaca 44859502  T
Q  638 nnnnnnnttggtaaatgaaaaagtgttgaatcactactactagaagaaagaacagggattcgacacaactaagaacaaaggtaaggatgtaaatagatga 737  Q
           ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44859501 aaaaaaattgataaataaagaagtgttgaatcactactactagaagaaagaacagggattcgacacaactaagaacaaaggtaaggatgtaaatagatga 44859402  T
Q  738 ttaagttgagttacgcttagtaacnnnnnnnaagtagatagatccacttagaccacaccacacaaggtgagatgattgggttaggatctctc 829  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44859401 ttaagttgagttacgcttagtaactttttttaagtagatagatccacttagaccacaccacacaaggtgagatgattgggttaggatctctc 44859310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 323
Target Start/End: Complemental strand, 44860178 - 44859869
Alignment:
Q  13 agcagagaatacaccggagaggatccagatccaataaggtgttggaaaatcttctttnnnnnnnnnnnnnnnnngggtgtttggaaaagtctttgatgta 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                 || |||||||||||||||||||||||    
T  44860178 agcagagaatacactggagaggatccagatccaataaggtgttggaaaatcttctttaaaaaaaaaaaaaaaaagg-tgtttggaaaagtctttgatgta 44860080  T
Q  113 ggctaaacaaaatatattacgttggacgtaaaactaaannnnnnntttcaaatctatatgaaaaatagaaatagctttataaatgaaacattttctacta 212  Q
    |||||||||||||||||||| |||||||||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44860079 ggctaaacaaaatatattacattggacgtaaaaataaaccccccctttcaaatctatatgaaaaatagaaatagctttataaatgaaacattttctacta 44859980  T
Q  213 tatcagattgcacctgaaaattatatcgaaatctttcgtaactatgaaattttgatttatttaattttttgttctatatgtaacacgtcctacttccctt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44859979 tatcagattgcacctgaaaattatatcgaaatctttcgtaactatgaaattttgatttatttaattttttgttctatatgtaacacgtcctacttccctt 44859880  T
Q  313 gcaatcaaaac 323  Q
    |||||||||||    
T  44859879 gcaatcaaaac 44859869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 518 - 563
Target Start/End: Complemental strand, 41225762 - 41225717
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaa 563  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||    
T  41225762 ccgtgagcatagctcagttggtaggacaatgcattattatatgtaa 41225717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 560
Target Start/End: Original strand, 10970266 - 10970306
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  10970266 gtgagcatagctcagttggtaggataatgcattattatatg 10970306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 29108660 - 29108704
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  29108660 ccgtgagcatagctcagttggtaggacaatgcattattatatgta 29108704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 517 - 635
Target Start/End: Original strand, 24074503 - 24074622
Alignment:
Q  517 tccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaatt 615  Q
    ||||||| || |||| ||||||||||| ||||||||||||||||||  |  |||| || ||||||| || |   |||||||||| ||||| |||||||||    
T  24074503 tccgtgatcacagctcagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattcaccttataaggtgaatt 24074602  T
Q  616 ctagccgctaaactacctga 635  Q
    |||||| |||  ||||||||    
T  24074603 ctagccactaggctacctga 24074622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 520 - 559
Target Start/End: Original strand, 34797138 - 34797177
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  34797138 gtgagcatagcttagttggtaggataatgcattattatat 34797177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 4798638 - 4798596
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  4798638 ccgtgagtatagctcagttggtaggataatgcattattatatg 4798596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 635
Target Start/End: Original strand, 7649527 - 7649644
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattc 616  Q
    |||||||||||||| | ||||||||| ||||||||||||||||| | | |||   || |||||||||| |  ||||||||||| ||||  ||||||||||    
T  7649527 ccgtgagcatagctcacttggtaggacaatgcattattatatgt-agggctggggttcgaacctcgaacaccccacttattcaccttacaaggtgaattc 7649625  T
Q  617 tagccgctaaactacctga 635  Q
    ||||| |||  ||||||||    
T  7649626 tagccactaggctacctga 7649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 9524955 - 9524997
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  9524955 ccgtgagcatagctcagttggtaggacaatgcattattatatg 9524997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 15042462 - 15042420
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  15042462 ccgtgagcatagctcagttggtaggacaatgcattattatatg 15042420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 17987546 - 17987504
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  17987546 ccgtgaacatagctcagttggtaggataatgcattattatatg 17987504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 23857421 - 23857379
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  23857421 ccgtgagcatagctcagttggtaggacaatgcattattatatg 23857379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 24608580 - 24608538
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  24608580 ccgtgagcatagctcagttggtaggacaatgcattattatatg 24608538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 28465616 - 28465658
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  28465616 ccgtgagcatagctcagttggtaggacaatgcattattatatg 28465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 39484467 - 39484425
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  39484467 ccgtgagcatagctcagttggtaggacaatgcattattatatg 39484425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 43847701 - 43847742
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  43847701 cgtgagcatagctcagttggtaggacaatgcattattatatg 43847742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 34073336 - 34073292
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||    
T  34073336 ccgtgagcgtagttcagttggtaggataatgcattattatatgta 34073292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 35556483 - 35556439
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  35556483 ccgtgagcatagcttagttggtaggacaatgcattagtatatgta 35556439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 43468802 - 43468758
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||    
T  43468802 ccgtgagcatagctcagttggtaggacaatgcattgttatatgta 43468758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 25689484 - 25689441
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||    
T  25689484 cgtgagcatagctcagttggtaggacactgcattattatatgta 25689441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 562
Target Start/End: Original strand, 42688055 - 42688098
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||    
T  42688055 cgtgagcatagttcagttggtaggacaatgcattattatatgta 42688098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 633
Target Start/End: Complemental strand, 8740679 - 8740637
Alignment:
Q  591 acttattcatcttatgaggtgaattctagccgctaaactacct 633  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||    
T  8740679 acttattcatcttataaggtgaattctagccactaagctacct 8740637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 631
Target Start/End: Complemental strand, 13537336 - 13537294
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactac 631  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||    
T  13537336 ccacttattcatcttataaggtgaattgtagccactaaactac 13537294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 631
Target Start/End: Complemental strand, 13626884 - 13626842
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactac 631  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||    
T  13626884 ccacttattcatcttataaggtgaattgtagccactaaactac 13626842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 17980280 - 17980322
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| || |||||||||||||    
T  17980280 ccgtgagcatagctcagttggtaggacaaagcattattatatg 17980322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 27558967 - 27558925
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||| ||||| | ||||||||||||||||||||||||||    
T  27558967 ccgtgagcgtagctcatttggtaggataatgcattattatatg 27558925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 28378883 - 28378929
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||||    
T  28378883 ccacttattcaccttataaggtgaattctaaccactaaactacctga 28378929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 631
Target Start/End: Complemental strand, 33570454 - 33570412
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactac 631  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||    
T  33570454 ccacttattcaccttataaggtgaattctagccactaaactac 33570412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Complemental strand, 36359743 - 36359697
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  36359743 ccacttattcaccttataaggtgaattctagccactagactacctga 36359697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 40249977 - 40249935
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  40249977 ccgtgagcataactcagttggtaggacaatgcattattatatg 40249935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 633
Target Start/End: Complemental strand, 44070391 - 44070349
Alignment:
Q  591 acttattcatcttatgaggtgaattctagccgctaaactacct 633  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||    
T  44070391 acttattcaccttataaggtgaattctagccactaaactacct 44070349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 7603726 - 7603771
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| || |||| |||||| ||||||||||||||||    
T  7603726 gttccgtgagcataacttagttcgtaggacaatgcattattatatg 7603771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 9737457 - 9737416
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||| ||||||||||| ||| |||||||||||    
T  9737457 ccgtgagcatagctcagttggtaggacaatacattattatat 9737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 25689544 - 25689503
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||| ||||||| ||| |||||||||||||||    
T  25689544 ccgtgagcatagctcagttggttggacaatgcattattatat 25689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 26703986 - 26703945
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| || ||||||||||| ||||||||||||||||    
T  26703986 cgtgagcataactcagttggtaggacaatgcattattatatg 26703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 42761965 - 42761920
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| || |||||||| || ||||||||||||||||    
T  42761965 gttccgtgagcataactcagttggtatgacaatgcattattatatg 42761920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 9e-20; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 516 - 633
Target Start/End: Complemental strand, 335129 - 335011
Alignment:
Q  516 ttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaa-cctcgaaattccacttattcatcttatgaggtgaat 614  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | | || ||| ||| || |  ||||||||||| ||||| ||||||||    
T  335129 ttccgtgagcatagcttagttggtaggacaatgcattattatatgtaaggaccggagttcgaaccctggacaccccacttattcaccttataaggtgaat 335030  T
Q  615 tctagccgctaaactacct 633  Q
    ||||||  |||||||||||    
T  335029 tctagctactaaactacct 335011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 54983806 - 54983765
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  54983806 ccgtgagcatagctcagttggtaggataatgcattattatat 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 49639026 - 49639070
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  49639026 ccgtgagcatagctcagttggtaggacaatgcattattatatgta 49639070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 635
Target Start/End: Original strand, 14417869 - 14417984
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattctag 619  Q
    ||||||||||| | ||||||||| |||||||||||||||| |  | ||| | || ||||| || | |  ||||||||||| ||||| |||||||||||||    
T  14417869 tgagcatagctcaattggtaggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttattcaccttataaggtgaattctag 14417968  T
Q  620 ccgctaaactacctga 635  Q
    || |||| ||||||||    
T  14417969 ccactaagctacctga 14417984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 33206755 - 33206797
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  33206755 ccgtgagcatagctcagttggtaggacaatgcattattatatg 33206797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 34503214 - 34503255
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  34503214 cgtgagcatagctcagttggtaggacaatgcattattatatg 34503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 40786279 - 40786320
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  40786279 cgtgagcatagctcagttggtaggacaatgcattattatatg 40786320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 635
Target Start/End: Complemental strand, 42909227 - 42909182
Alignment:
Q  590 cacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||    
T  42909227 cacttattcattttataaggtgaattctagccactaaactacctga 42909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Original strand, 8958363 - 8958403
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  8958363 gtgagcatagctcagttggtaggataatgcattactatatg 8958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 13540061 - 13540017
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||    
T  13540061 ccgtgagtatagctcagttggtaggacaatgcattattatatgta 13540017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 45713478 - 45713522
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||    
T  45713478 ccgtgagcataacttagttggtaggacaatgcattattatatgta 45713522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 48173284 - 48173328
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| |||||||| || ||||||||||||||||||    
T  48173284 ccgtgagcatagctcagttggtaagacaatgcattattatatgta 48173328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 50720420 - 50720464
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||    
T  50720420 ccgtgagcatagttcagttggtaggacaatgcattattatatgta 50720464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 50792428 - 50792384
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||    
T  50792428 ccgtgagcatagttcagttggtaggacaatgcattattatatgta 50792384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Original strand, 51399950 - 51399990
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  51399950 gtgagcatagctcagttggtaggatattgcattattatatg 51399990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 635
Target Start/End: Complemental strand, 36727552 - 36727442
Alignment:
Q  525 catagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattctagccgc 623  Q
    ||||||| ||||||||||| |||||||||||||||| || | | |   || |||||||| | |  ||||||||||||||||| ||||||||||||||| |    
T  36727552 catagctcagttggtaggacaatgcattattatatgcaaggtcgggg-ttcgaacctcggacaccccacttattcatcttataaggtgaattctagccac 36727454  T
Q  624 taaactacctga 635  Q
    |||  |||||||    
T  36727453 taagttacctga 36727442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 16278048 - 16278006
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| |||||||||||  |||||||||||||||    
T  16278048 ccgtgagcatagctcagttggtaggaccatgcattattatatg 16278006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 17440062 - 17440020
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||  |||||||||| ||||||||||||||||    
T  17440062 ccgtgagcatagctcggttggtaggacaatgcattattatatg 17440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 19117452 - 19117498
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||| |||||||||||| ||||||||||| ||| ||||||||||||    
T  19117452 agttctgtgagcatagctcagttggtaggacaatacattattatatg 19117498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 24751357 - 24751315
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| |||| |||||| ||||||||||||||||    
T  24751357 ccgtgagcatagctcagttagtaggacaatgcattattatatg 24751315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 31698603 - 31698649
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| ||||||||||||||| ||| |||| ||||    
T  31698603 ccacttattcatcttataaggtgaattctagccactagactatctga 31698649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 32665279 - 32665321
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  32665279 ccgttagcatagctcagttagtaggataatgcattattatatg 32665321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 562
Target Start/End: Original strand, 34136763 - 34136805
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  34136763 gtgagcatagctcagttggtagaacaatgcattattatatgta 34136805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 35483267 - 35483309
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| |||| |||||| ||||||||||||||||    
T  35483267 ccgtgagcatagctcagttagtaggacaatgcattattatatg 35483309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 42271110 - 42271068
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| |||||||| |||||||    
T  42271110 ccgtgagcatagctcagttggtaggacaatgcattgttatatg 42271068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 42832153 - 42832111
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||  ||||||||||||||||||||||||||||    
T  42832153 ccgtgatcatagcccagttggtaggataatgcattattatatg 42832111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 43566893 - 43566851
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  43566893 ccgtgaacatagctcagttggtaggacaatgcattattatatg 43566851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 593 - 635
Target Start/End: Complemental strand, 54983726 - 54983684
Alignment:
Q  593 ttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||    
T  54983726 ttattcaccttataaggtgaattctagccactaaactacctga 54983684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 8475414 - 8475455
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| |||||||||| |||||    
T  8475414 cgtgagcatagctcagttggtaggacaatgcattatgatatg 8475455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 635
Target Start/End: Original strand, 8959520 - 8959565
Alignment:
Q  590 cacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||||||||||| ||||||||||| ||| |||| ||||||||    
T  8959520 cacttattcatcttataaggtgaattcttgccactaagctacctga 8959565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 635
Target Start/End: Original strand, 37059518 - 37059563
Alignment:
Q  590 cacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||||||||||| || ||||||||| || |||||||||||||    
T  37059518 cacttattcatcttataagatgaattctaaccactaaactacctga 37059563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 41121870 - 41121911
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| || ||||||||||| ||||||||||||||||    
T  41121870 cgtgagcataactcagttggtaggacaatgcattattatatg 41121911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 29710197 - 29710080
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaac-ctcgaaattccacttattcatcttatgaggtgaattc 616  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||  | ||||  || |||| || || | |||||||||||||||||| ||||||||||    
T  29710197 ccgtgagtatagctcagttggtaggacaatgcattattatatgtaggg-ctgaggttcgaactctagacactccacttattcatcttataaggtgaattc 29710099  T
Q  617 tagccgctaaactacctga 635  Q
    ||||| |||| ||||||||    
T  29710098 tagccactaagctacctga 29710080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 45198195 - 45198077
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    ||||||||||| || |||||||||||||||||||||||||||| | ||| ||| ||| ||||| | || |  ||| ||||||| ||||| ||||||||||    
T  45198195 ccgtgagcataactcagttggtaggataatgcattattatatgcagtgattgagattcgaaccccggacaccccatttattcaccttataaggtgaattc 45198096  T
Q  617 tagccgctaaactacctga 635  Q
    |||||  || |||||||||    
T  45198095 tagccattagactacctga 45198077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 36316071 - 36316029
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  36316071 ccgtgagcatagctcagttggtaggataatgcattattatatg 36316029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 633
Target Start/End: Original strand, 25818284 - 25818400
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattc 616  Q
    ||||||||||| || |||||||||||||||||||||||||||| |  | ||| | || ||||| |||| | |||||||||||| | ||| |||||||||     
T  25818284 ccgtgagcataactcagttggtaggataatgcattattatatgcaggggctggagttcgaaccccgaacactccacttattcaccatataaggtgaatta 25818383  T
Q  617 tagccgctaaactacct 633  Q
    ||||  |||| ||||||    
T  25818384 tagcaactaagctacct 25818400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 22380488 - 22380527
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcatta 553  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  22380488 agttccgtgagcatagctcagttggtaggataatgcatta 22380527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 29778979 - 29779021
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  29778979 ccgtgagcatagctcaattggtaggataatgcattattatatg 29779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 635
Target Start/End: Original strand, 34948104 - 34948222
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    |||||||||||||| ||||||||||| |||||||||| ||||| | || | ||  || ||||| | || |  ||||||||||| ||||| ||||||||||    
T  34948104 ccgtgagcatagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcaccttataaggtgaattc 34948203  T
Q  617 tagccgctaaactacctga 635  Q
    ||||| |||  ||||||||    
T  34948204 tagccactaggctacctga 34948222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 46716327 - 46716373
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  46716327 agttccatgagcatagctcagttggtaggacaatgcattattatatg 46716373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 49012396 - 49012438
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  49012396 ccgtgagcatagctcagttggtaggacaatgcattattatatg 49012438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 8195913 - 8195954
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  8195913 ccgtgagcatagctcagttggtaggacaatgcattattatat 8195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 47403683 - 47403567
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaaattccacttattcatcttatgaggtgaattct 617  Q
    |||| ||||||||| ||||||| | ||||| | ||||||||||||  |  || | || |||||| || | |||||||||||| ||||| |||||||||||    
T  47403683 ccgtaagcatagcttagttggt-gaataatactttattatatgtaggggttggagttcgaacctggacactccacttattcaccttataaggtgaattct 47403585  T
Q  618 agccgctaaactacctga 635  Q
    |||| |||| ||||||||    
T  47403584 agccactaagctacctga 47403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 47552212 - 47552253
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  47552212 cgtgagcatagctcagttggtaggacaatgcattattatatg 47552253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Complemental strand, 4590701 - 4590661
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  4590701 gtgagcatagctcagttggtaggacaatgcattattatatg 4590661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 7263095 - 7263051
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||    
T  7263095 ccgtgagtatagctcagttggtaggacaatgcattattatatgta 7263051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Original strand, 22047520 - 22047560
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  22047520 gtgagcatagctcagttggtaggacaatgcattattatatg 22047560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 32387222 - 32387178
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||    
T  32387222 ccgtgagcataactcagttggtaggataatacattattatatgta 32387178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Complemental strand, 34962067 - 34962027
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  34962067 gtgagcatagctcagttggtaggacaatgcattattatatg 34962027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 560
Target Start/End: Complemental strand, 2261582 - 2261539
Alignment:
Q  517 tccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||    
T  2261582 tccgtgagcatagctcaattggtaggacaatgcattattatatg 2261539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Complemental strand, 17900973 - 17900934
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  17900973 tgagcatagcttagttggtaggacaatgcattattatatg 17900934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 22966060 - 22966013
Alignment:
Q  513 gagttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||| |||||||||||||| | ||||||||| ||||||||||||||||    
T  22966060 gagtcccgtgagcatagctcaattggtaggacaatgcattattatatg 22966013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Complemental strand, 27047809 - 27047770
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  27047809 tgagcatagctcagttggtaggacaatgcattattatatg 27047770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 562
Target Start/End: Original strand, 36176866 - 36176913
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||| ||| ||||||| ||||||||||| ||||||||||||||||||    
T  36176866 gttccatgaacatagctcagttggtaggacaatgcattattatatgta 36176913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 524 - 562
Target Start/End: Complemental strand, 924383 - 924345
Alignment:
Q  524 gcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  924383 gcatagctcagttggtaggatagtgcattattatatgta 924345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 4818018 - 4818060
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||    
T  4818018 ccgtgagcatcgctcagttggtaggacaatgcattattatatg 4818060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 562
Target Start/End: Complemental strand, 14967729 - 14967687
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||| || ||||||||||| ||||||||||||||||||    
T  14967729 gtgagcataactcagttggtaggacaatgcattattatatgta 14967687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 562
Target Start/End: Complemental strand, 15397205 - 15397163
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||| || ||||||||||| ||||||||||||||||||    
T  15397205 gtgagcataactcagttggtaggacaatgcattattatatgta 15397163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 22741201 - 22741243
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||  |||||||||| ||||||||||||||||    
T  22741201 ccgtgagcatagctcggttggtaggacaatgcattattatatg 22741243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 631
Target Start/End: Original strand, 22741275 - 22741317
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactac 631  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||    
T  22741275 ccacttattcatcttataaggtgaattctagccactagactac 22741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 30644167 - 30644209
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||    
T  30644167 ccgtgagtatagctcagttggtaggacaatgcattattatatg 30644209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Complemental strand, 33202579 - 33202533
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| ||||||||||||||| |||  ||||||||    
T  33202579 ccacttattcatcttataaggtgaattctagccactaggctacctga 33202533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 38778776 - 38778734
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  38778776 ccgtgagcatatctcagttggtaggacaatgcattattatatg 38778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 44437922 - 44437880
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| |||| |||||| ||||||||||||||||    
T  44437922 ccgtgagcatagctcagttagtaggacaatgcattattatatg 44437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 21925473 - 21925514
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||| | ||||||||| |||||||||||||||    
T  21925473 ccgtgagcatagctcaattggtaggacaatgcattattatat 21925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 634
Target Start/End: Complemental strand, 35890915 - 35890870
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctg 634  Q
    ||||||||||||||||| ||||||||||||||| ||| | ||||||    
T  35890915 ccacttattcatcttataaggtgaattctagccactagattacctg 35890870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 563
Target Start/End: Complemental strand, 35919768 - 35919723
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaa 563  Q
    |||||||||||||| ||||| || || |||||||||||||||||||    
T  35919768 ccgtgagcatagctcagttgttaagacaatgcattattatatgtaa 35919723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 635
Target Start/End: Original strand, 38025408 - 38025457
Alignment:
Q  586 attccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||||||||||||||| |||||||| |||||| |||  ||||||||    
T  38025408 attccacttattcatcttataaggtgaatcctagccactaggctacctga 38025457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 45197316 - 45197353
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattatt 555  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  45197316 ccgtgagcatagctcagttggtaggacaatgcattatt 45197353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 9e-17; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 515 - 635
Target Start/End: Complemental strand, 4429582 - 4429461
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaa 613  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |  |  ||   || |||||  ||| |||||||||||||||||||| |||||||    
T  4429582 gttccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccctgaacattccacttattcatcttataaggtgaa 4429483  T
Q  614 ttctagccgctaaactacctga 635  Q
    |||||||| ||| |||| ||||    
T  4429482 ttctagccactagactatctga 4429461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 8261775 - 8261730
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  8261775 gttccgtgagcatagctcagttggtaggataatgcattattatatg 8261730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 518 - 563
Target Start/End: Original strand, 36164660 - 36164705
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaa 563  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||    
T  36164660 ccgtgatcatagccaagttggtaggataatgcattattatatgtaa 36164705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 29442064 - 29442020
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  29442064 ccgtgagcatagctcagttggtaggacaatgcattattatatgta 29442020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 9527496 - 9527542
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  9527496 ccacttattcatcttataaggtgaattctagccactagactacctga 9527542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 18923982 - 18923940
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  18923982 ccgtgagcatagctcagttggtaggacaatgcattattatatg 18923940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 620
Target Start/End: Complemental strand, 28917014 - 28916912
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattct 617  Q
    ||||| |||||||||||||||||||  |||||||||||||||||  | ||||| || ||||| | || |  ||||||||||| |||| ||||| ||||||    
T  28917014 cgtgaacatagctaagttggtaggaggatgcattattatatgtaggggctgaagttcgaaccccaaacaccccacttattcaccttacgaggtaaattct 28916915  T
Q  618 agc 620  Q
    |||    
T  28916914 agc 28916912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 29331261 - 29331219
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  29331261 ccgtgagcatagcttagttggtaggacaatgcattattatatg 29331219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 34560434 - 34560317
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    |||||||  ||||| ||||||||||||||||||||||||||||| |||  | |  || ||||||| || |  ||||||||||| ||||| ||||||||||    
T  34560434 ccgtgagtttagctcagttggtaggataatgcattattatatgt-atgggtcaggttcgaacctcggacaccccacttattcaccttataaggtgaattc 34560336  T
Q  617 tagccgctaaactacctga 635  Q
    ||| | ||| |||||||||    
T  34560335 tagtcactagactacctga 34560317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 38020045 - 38020003
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  38020045 ccgtgagcatagctcagttggtaggacaatgcattattatatg 38020003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 12073174 - 12073133
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  12073174 ccgtgagcataactcagttggtaggataatgcattattatat 12073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 43555970 - 43555929
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  43555970 cgtgagcatagctcagttggtaggacaatgcattattatatg 43555929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 511 - 635
Target Start/End: Complemental strand, 749690 - 749566
Alignment:
Q  511 tagagttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaaattccacttattcatcttatgaggt 610  Q
    |||||||||||||||||| || ||||||| | | ||||||||||||||||||  |  ||   || ||||| ||| |  ||||||||||| ||||| || |    
T  749690 tagagttccgtgagcataactcagttggtcgaacaatgcattattatatgtaggggttggggttcgaaccccgacaccccacttattcaccttataagat 749591  T
Q  611 gaattctagccgctaaactacctga 635  Q
    |||||||||||| ||  ||||||||    
T  749590 gaattctagccgttaggctacctga 749566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 3533070 - 3533026
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||    
T  3533070 ccgtgagcatagctcagttagtaggacaatgcattattatatgta 3533026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Complemental strand, 4354200 - 4354160
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  4354200 gtgagcatagctcagttggtaggacaatgcattattatatg 4354160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 591 - 635
Target Start/End: Original strand, 12866196 - 12866240
Alignment:
Q  591 acttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  12866196 acttattcatcttataaggtgaattctagccactaaattacctga 12866240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 15774409 - 15774365
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||    
T  15774409 ccgtgagcataactcagttggtaggacaatgcattattatatgta 15774365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 558
Target Start/End: Original strand, 22346418 - 22346458
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattata 558  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  22346418 ccgtgagcatagctaagttggtaggacaatacattattata 22346458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 560
Target Start/End: Complemental strand, 33059587 - 33059547
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  33059587 gtgaacatagctcagttggtaggataatgcattattatatg 33059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 38851633 - 38851677
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||    
T  38851633 ccgtgagaatagctcagttggtaggacaatgcattattatatgta 38851677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 8364504 - 8364461
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||| || ||||||||||| ||||||||||||||||||    
T  8364504 cgtgagcataactcagttggtaggaaaatgcattattatatgta 8364461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Original strand, 21884568 - 21884615
Alignment:
Q  513 gagttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||| |||||||||||||| | ||||||||| ||||||||||||||||    
T  21884568 gagtcccgtgagcatagctcaattggtaggacaatgcattattatatg 21884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 554
Target Start/End: Original strand, 23990322 - 23990365
Alignment:
Q  511 tagagttccgtgagcatagctaagttggtaggataatgcattat 554  Q
    ||||||||||||||||||||| |||||||| || ||||||||||    
T  23990322 tagagttccgtgagcatagctcagttggtaagacaatgcattat 23990365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 5172699 - 5172657
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||    
T  5172699 ccgtgagcatagctcagttgataggacaatgcattattatatg 5172657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 9408711 - 9408673
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattatta 556  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  9408711 ccgtgagcatagctcagttggtaggacaatgcattatta 9408673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 11405526 - 11405572
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| ||||||||||||||| |||| ||||||||    
T  11405526 ccacttattcaccttataaggtgaattctagccactaagctacctga 11405572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Complemental strand, 15774337 - 15774291
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| ||||||||||||||| |||| ||||||||    
T  15774337 ccacttattcaccttataaggtgaattctagccactaagctacctga 15774291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 20357458 - 20357500
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  20357458 ccgtgagcataactcagttggtaggacaatgcattattatatg 20357500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 20562497 - 20562455
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  20562497 ccgtgagcataactcagttggtaggacaatgcattattatatg 20562455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 23930641 - 23930599
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| | ||||||||||| ||||||||||||||||    
T  23930641 ccgtgagcatagttcagttggtaggacaatgcattattatatg 23930599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 24661980 - 24662022
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| | ||||||||| ||||||||||||||||    
T  24661980 ccgtgagcatagctcaattggtaggacaatgcattattatatg 24662022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 27745155 - 27745197
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| | ||||||||| ||||||||||||||||    
T  27745155 ccgtgagcatagctcatttggtaggaaaatgcattattatatg 27745197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 35593833 - 35593879
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| |||||||||||||||||||  ||||||||    
T  35593833 ccacttattcaccttataaggtgaattctagccgctaggctacctga 35593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 37490888 - 37490930
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  37490888 ccgtgagcataactcagttggtaggacaatgcattattatatg 37490930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 42831945 - 42831987
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| | ||||||||||||||    
T  42831945 ccgtgagcatagctcagttggtaggacattgcattattatatg 42831987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 46116271 - 46116229
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| |||||||||| |||||    
T  46116271 ccgtgagcatagcttagttggtaggacaatgcattatcatatg 46116229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 49010797 - 49010755
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| |||| |||||||||||    
T  49010797 ccgtgagcatagctcagttggtaggacaatgtattattatatg 49010755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 593 - 635
Target Start/End: Original strand, 49916514 - 49916556
Alignment:
Q  593 ttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||| |||| ||||||||||||||| |||||||||||||    
T  49916514 ttattcatattataaggtgaattctagccactaaactacctga 49916556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 24168677 - 24168632
Alignment:
Q  517 tccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||||||| |||| ||||||  |||||||||||||||||    
T  24168677 tccgtgagcatagctcagtttgtaggaacatgcattattatatgta 24168632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 49606800 - 49606751
Alignment:
Q  513 gagttccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||| |||| ||||||||| ||||| ||||| ||||||||||||||||||    
T  49606800 gagtcccgtaagcatagctcagttgttaggacaatgcattattatatgta 49606751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 635
Target Start/End: Original strand, 38820570 - 38820690
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaaattccacttattcatcttatgaggtgaat 614  Q
    ||||||||| ||||||| ||||| ||||| ||||||||||||||||||  | |||   ||||||||  || |  ||| ||||||||||||| ||||||||    
T  38820570 gttccgtgaacatagctcagttgttaggacaatgcattattatatgtaggggctggggtttgaacccagacaccccatttattcatcttataaggtgaat 38820669  T
Q  615 tctagccgctaaactacctga 635  Q
    |||||||  ||||||||||||    
T  38820670 tctagccattaaactacctga 38820690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 10207640 - 10207685
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  10207640 gttccgtgagcatagctcagttggtaggataatgcattattatatg 10207685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 20122572 - 20122454
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||  | | |   || ||||| | || |  ||||||||||||||||| ||||||||||    
T  20122572 ccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataaggtgaattc 20122473  T
Q  617 tagccgctaaactacctga 635  Q
    ||||| |||  ||||||||    
T  20122472 tagccactaggctacctga 20122454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 36072669 - 36072548
Alignment:
Q  516 ttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaat 614  Q
    |||||||||||||||| ||||| ||||| |||||| |||||||||||    | | | ||||||| || || | |||||||||||| ||||| |||| |||    
T  36072669 ttccgtgagcatagctcagttgttaggacaatgcaatattatatgtaggagccggagtttgaacttcagacactccacttattcaccttataaggtaaat 36072570  T
Q  615 tctagccgctaaactacctgat 636  Q
    ||||||| ||||| ||||||||    
T  36072569 tctagccactaaattacctgat 36072548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 36481064 - 36481109
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  36481064 gttccgtgagcatagctcagttggtaggacaatgcattattatatg 36481109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 560
Target Start/End: Complemental strand, 25050335 - 25050295
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  25050335 gtgagcatagctcagttggtaggataatgcattattatatg 25050295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 580880 - 580838
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  580880 ccgtgagcatagctcagttggtaggacaatgcattattatatg 580838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 29664673 - 29664719
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  29664673 ccacttattcatcttataaggtgaattctagccactagactacctga 29664719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 30474292 - 30474250
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  30474292 ccgtgagcatagctcagttggtaggacaatgcattattatatg 30474250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 22297548 - 22297507
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  22297548 cgtgagcatagctcagttggtaggacaatgcattattatatg 22297507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 2114532 - 2114488
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||    
T  2114532 ccgtgagcatagctcagttggtagaacaatgcattattatatgta 2114488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 8234889 - 8234845
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  8234889 ccgtgagcatagctcagttggtaggacaatacattattatatgta 8234845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 15392308 - 15392264
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||    
T  15392308 ccgtgagcataactcagttggtaggacaatgcattattatatgta 15392264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 36520877 - 36520833
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  36520877 ccgtgagcgtagctcagttggtaggacaatgcattattatatgta 36520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 41711733 - 41711689
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||    
T  41711733 ccgtgagcatagctctgttggtaggacaatgcattattatatgta 41711689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 9791991 - 9791948
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||    
T  9791991 cgtgagcatagttcagttggtaggacaatgcattattatatgta 9791948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 632
Target Start/End: Original strand, 25777527 - 25777570
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacc 632  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  25777527 ccacttattcaccttatgaagtgaattctagccactaaactacc 25777570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 560
Target Start/End: Complemental strand, 26807182 - 26807139
Alignment:
Q  517 tccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||| || ||||||||||| ||||||||||||||||    
T  26807182 tccgtgagcataactcagttggtaggacaatgcattattatatg 26807139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 562
Target Start/End: Complemental strand, 36426956 - 36426909
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||| |||||||||||| | ||||||||| ||||||||||||||||||    
T  36426956 gttctgtgagcatagctcacttggtaggacaatgcattattatatgta 36426909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 621
Target Start/End: Original strand, 44950909 - 44951008
Alignment:
Q  523 agcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattctagcc 621  Q
    ||||||||| | ||| ||||| |||||||| |||||| |   || ||| ||| ||||||| || | |||||||||||||||||| |||||||||||||||    
T  44950909 agcatagctcaattgataggacaatgcattgttatatatcgagattgagattcgaacctcagatactccacttattcatcttataaggtgaattctagcc 44951008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 1836586 - 1836628
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||    
T  1836586 ccgtgagcctagctcagttggtaggacaatgcattattatatg 1836628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 7086251 - 7086293
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||  ||||||||||||||||    
T  7086251 ccgtgagcatagctcagttggtagggcaatgcattattatatg 7086293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Complemental strand, 9547152 - 9547106
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| |||||||||||||||  || |||||||||    
T  9547152 ccacttattcatcttataaggtgaattctagccaatagactacctga 9547106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 10262737 - 10262779
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  10262737 ccgtgagcataactcagttggtaggacaatgcattattatatg 10262779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 15690131 - 15690089
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| |||||||| |||||||    
T  15690131 ccgtgagcatagctcagttggtaggacaatgcattgttatatg 15690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 18364472 - 18364430
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  18364472 ccgtgagcatagctgagttggtagaacaatgcattattatatg 18364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 31564093 - 31564135
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  31564093 ccgtgagcataactcagttggtaggacaatgcattattatatg 31564135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 44422101 - 44422147
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  44422101 agttccgtgagcatggcttatttggtaggacaatgcattattatatg 44422147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Complemental strand, 16762882 - 16762841
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| ||||||||||| |||||||| |||||||||    
T  16762882 tgagcatagctcagttggtaggacaatgcatttttatatgta 16762841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 560
Target Start/End: Complemental strand, 24034145 - 24034108
Alignment:
Q  523 agcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  24034145 agcatagcttagttggtaggacaatgcattattatatg 24034108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 31956867 - 31956908
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||| || ||||||||||| ||||||||||||||||||    
T  31956867 tgagcataactcagttggtaggacaatgcattattatatgta 31956908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 34620517 - 34620558
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||  |||||||||| ||||||||||||||||    
T  34620517 cgtgagcatagctcggttggtaggacaatgcattattatatg 34620558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 36665425 - 36665470
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||    
T  36665425 gttccgtgagtatagctcagtttgtaggacaatgcattattatatg 36665470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 41699101 - 41699142
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| || ||||||||||||| ||||||||||||||    
T  41699101 cgtgagcataactcagttggtaggatattgcattattatatg 41699142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 636
Target Start/End: Complemental strand, 6025483 - 6025365
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaaattccacttattcatcttatgaggtgaattct 617  Q
    |||| |||||| || |||||||||||||||||||||||||||| |  |   |  ||| ||||| || |  |||||||||||||||||| |||||||||||    
T  6025483 ccgtaagcataactcagttggtaggataatgcattattatatgcaggggtcgggattcgaaccccggacatccacttattcatcttataaggtgaattct 6025384  T
Q  618 agccgctaaactacctgat 636  Q
    ||||| ||| |||||||||    
T  6025383 agccgttaagctacctgat 6025365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 635
Target Start/End: Original strand, 30566056 - 30566174
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    ||||||||||| || ||||||||||| |||||||||||||||| |  |  |||| |||||||| | || |  ||||||||||| ||||| ||||||||||    
T  30566056 ccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaattc 30566155  T
Q  617 tagccgctaaactacctga 635  Q
     |||| ||| |||||||||    
T  30566156 cagccactagactacctga 30566174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 631
Target Start/End: Original strand, 32057032 - 32057146
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| | ||   ||  || ||||| | || || ||||||||||||||||| ||||||||||    
T  32057032 ccgtgagcatagctcagttgataggacaatgcattattatatgcagtggtcgaggttcgaaccccagagatcccacttattcatcttataaggtgaattc 32057131  T
Q  617 tagccgctaaactac 631  Q
    || || |||||||||    
T  32057132 taaccactaaactac 32057146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 519 - 635
Target Start/End: Complemental strand, 12128005 - 12127888
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattct 617  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |  |   | |||| ||||| | || |  ||||||||||| ||||| |||||||||||    
T  12128005 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcaccttataaggtgaattct 12127906  T
Q  618 agccgctaaactacctga 635  Q
    |||| ||| |||||||||    
T  12127905 agccactagactacctga 12127888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 560
Target Start/End: Complemental strand, 19642654 - 19642602
Alignment:
Q  508 atatagagttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  19642654 atatatagtcccgtgagcatagctcagttggtaggacaatgcattattatatg 19642602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 625
Target Start/End: Complemental strand, 6297003 - 6296897
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattcta 618  Q
    ||||||||||||  |||| ||||| |||||||||||||||| ||||   | |||| ||||||| || || | ||||||||||||||| | ||||||| ||    
T  6297003 gtgagcatagctcggttgataggacaatgcattattatatgcaatggtcggaattcgaacctcggacatcctacttattcatcttataatgtgaattata 6296904  T
Q  619 gccgcta 625  Q
    |||||||    
T  6296903 gccgcta 6296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 625
Target Start/End: Complemental strand, 6303813 - 6303707
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattcta 618  Q
    ||||||||||||  |||| ||||| |||||||||||||||| ||||   | |||| ||||||| || || | ||||||||||||||| | ||||||| ||    
T  6303813 gtgagcatagctcggttgataggacaatgcattattatatgcaatggtcggaattcgaacctcggacatcctacttattcatcttataatgtgaattata 6303714  T
Q  619 gccgcta 625  Q
    |||||||    
T  6303713 gccgcta 6303707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 12089095 - 12089137
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  12089095 ccgtgagcatagctcagttggtaggacaatgcattattatatg 12089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 635
Target Start/End: Complemental strand, 22389775 - 22389729
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  22389775 ccacttattcaccttataaggtgaattctagccgctagactacctga 22389729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 22389847 - 22389805
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  22389847 ccgtgagcatagctcagttggtaggacaatgcattattatatg 22389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 5288445 - 5288400
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||    
T  5288445 gttccgtgagcataactcagttggtaggacaatgcattattatatg 5288400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 562
Target Start/End: Complemental strand, 31741557 - 31741516
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  31741557 tgagcatagctcagttggtaggacaatgcattattatatgta 31741516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 9491832 - 9491788
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||    
T  9491832 ccgtgagcataactcagttggtaggacaatgcattattatatgta 9491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Original strand, 22501019 - 22501058
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  22501019 tgagcatagctcagttggtaggacaatgcattattatatg 22501058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 7563673 - 7563635
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattatta 556  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  7563673 ccgtgagcatagctcagttggtaggacaatgcattatta 7563635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 10377221 - 10377179
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||    
T  10377221 ccgtgagtatagctcagttggtaggacaatgcattattatatg 10377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 522 - 560
Target Start/End: Original strand, 11982764 - 11982802
Alignment:
Q  522 gagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  11982764 gagcatagctcagttggtagaataatgcattattatatg 11982802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 21507298 - 21507256
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| |||| |||||||||||    
T  21507298 ccgtgagcatagcttagttggtaggacaatgtattattatatg 21507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 7392537 - 7392578
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||| ||||||| |||| |||||||||||||||||||||||    
T  7392537 cgtgaacatagctcagttagtaggataatgcattattatatg 7392578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 8233084 - 8233125
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||| ||||||||||| ||| |||||||||||    
T  8233084 ccgtgagcatagctcagttggtaggacaatacattattatat 8233125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 15126244 - 15126285
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||    
T  15126244 tgagcatagctcagttggtaggacaatacattattatatgta 15126285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 562
Target Start/End: Complemental strand, 20716482 - 20716445
Alignment:
Q  525 catagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  20716482 catagctcagttggtaggacaatgcattattatatgta 20716445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 33944460 - 33944342
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattc 616  Q
    ||||||||||| || |||||||||||||||||||||||||||| |  | | |   || |||||||||| | ||||||||||||| |||| ||||||||||    
T  33944460 ccgtgagcataactcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcgaatactccacttattcattttataaggtgaattc 33944361  T
Q  617 tagccgctaaactacctga 635  Q
    ||||| |||  ||||||||    
T  33944360 tagccactaggctacctga 33944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 618
Target Start/End: Complemental strand, 35803193 - 35803089
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaac-ctcgaaattccacttattcatcttatgaggtgaa 613  Q
    ||||||| ||||||||| | ||||||||| |||||||||||||||| |  ||| ||| || |||| ||||| |  ||||||||||||||||| |||||||    
T  35803193 gttccgtaagcatagctcaattggtaggacaatgcattattatatgcagggaccgaagttcgaactctcgacaccccacttattcatcttataaggtgaa 35803094  T
Q  614 ttcta 618  Q
    |||||    
T  35803093 ttcta 35803089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 32885682 - 32885728
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  32885682 agttccgtgagcatagctcagttggtaggacaatgcattattatatg 32885728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 12856179 - 12856224
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  12856179 gttccgtgagcatagctcagttggtaggataatgcactattatatg 12856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 20753222 - 20753178
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  20753222 ccgtgagcatagctcagttggtaggaaaatgcattattatatgta 20753178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 562
Target Start/End: Original strand, 20181206 - 20181253
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  20181206 gttccgtgagcatagctcagttggtaggacaatgcagtattatatgta 20181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 3544533 - 3544487
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  3544533 agttccgtgaacatagctcagttggtaggacaatgcattattatatg 3544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 560
Target Start/End: Complemental strand, 5430470 - 5430420
Alignment:
Q  510 atagagttccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  5430470 atagagtcccgtgagcatagctcagttggtaggacaatgtattattatatg 5430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 47018043 - 47018001
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  47018043 ccgtgagcatagctcagttggtaggacaatgcattattatatg 47018001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 50657878 - 50657920
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  50657878 ccgtgagcatagctcagttggtaggacaatgcattattatatg 50657920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 51536929 - 51536975
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  51536929 ccacttattcatcttatcaggtgaattctagccactagactacctga 51536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 53291440 - 53291482
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  53291440 ccgtgagcataactcagttggtaggataatgcattattatatg 53291482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 630
Target Start/End: Original strand, 31152516 - 31152629
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaac-ctcgaaattccacttattcatcttatgaggtgaattc 616  Q
    |||| ||||||||| ||||||||| | ||||||||||||||| ||  ||  ||||||||||| |  || | ||||||||| || ||||| ||||||||||    
T  31152516 ccgtaagcatagcttagttggtagaacaatgcattattatatatagggatcgaaatttgaactcaggacactccacttatccaccttataaggtgaattc 31152615  T
Q  617 tagccgctaaacta 630  Q
    ||||| ||| ||||    
T  31152616 tagccactagacta 31152629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 35031382 - 35031423
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  35031382 cgtgagcatagctcagttggtaggacaatgcattattatatg 35031423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 635
Target Start/End: Original strand, 17859778 - 17859894
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattcta 618  Q
    |||||||||||| ||||||||||| |||||||||||||| |||  | | | | || ||||| |||| |   |||||||||| ||||| ||||||||||||    
T  17859778 gtgagcatagctcagttggtaggacaatgcattattatacgtaggggccggagttcgaaccccgaacacctcacttattcaccttataaggtgaattcta 17859877  T
Q  619 gccgctaaactacctga 635  Q
    ||| |||  ||||||||    
T  17859878 gccactaggctacctga 17859894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 621
Target Start/End: Complemental strand, 24234171 - 24234067
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    |||||||||||||| ||||||||||  |||||||||||||||| |  | | |   |||||||| | || |  ||||||||||||||||| ||||||||||    
T  24234171 ccgtgagcatagctcagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcatcttataaggtgaattc 24234072  T
Q  617 tagcc 621  Q
    |||||    
T  24234071 tagcc 24234067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Complemental strand, 52608661 - 52608622
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  52608661 tgagcatagctcagttggtaggacaatgcattattatatg 52608622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 548984 - 548942
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||  ||||||||||| ||||||||||||||||    
T  548984 ccgtgagcatagcccagttggtaggacaatgcattattatatg 548942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 2487357 - 2487403
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| ||||||||||||||| |||  ||||||||    
T  2487357 ccacttattcatcttataaggtgaattctagccactaggctacctga 2487403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 4722561 - 4722519
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  4722561 ccgtgaacatagctcagttggtaggacaatgcattattatatg 4722519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 9172468 - 9172426
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  9172468 ccgtgagcataactcagttggtaggacaatgcattattatatg 9172426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 9285756 - 9285714
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| | ||||||||| ||||||||||||||||    
T  9285756 ccgtgagcatagctcaattggtaggacaatgcattattatatg 9285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 10098195 - 10098241
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||||||||| || |||||||||||| ||| |||||||||    
T  10098195 ccacttattcatcttataagatgaattctagccactagactacctga 10098241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 21476178 - 21476136
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||    
T  21476178 ccgtgagcatagctcagttgataggatattgcattattatatg 21476136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 31578017 - 31578059
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  31578017 ccgtgaacatagctgagttggtaggacaatgcattattatatg 31578059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 46735066 - 46735024
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| | ||||||||||||||    
T  46735066 ccgtgagcatagctcagttggtaggacactgcattattatatg 46735024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 50783531 - 50783489
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| | ||||||||||||||    
T  50783531 ccgtgagcatagctcagttggtaggacattgcattattatatg 50783489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 52560762 - 52560804
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| | ||||||||| ||||||||||||||||    
T  52560762 ccgtgagcatagctcaattggtaggacaatgcattattatatg 52560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 52743226 - 52743268
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||||  |||||||||| ||||||||||||||||    
T  52743226 ccgtgagcatagctcggttggtaggacaatgcattattatatg 52743268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 55266532 - 55266490
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  55266532 ccgtgagcatagctcagttggtagaacaatgcattattatatg 55266490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 56546546 - 56546504
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| | ||||||||| ||||||||||||||||    
T  56546546 ccgtgagcatagctcaattggtaggacaatgcattattatatg 56546504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 561
Target Start/End: Original strand, 3442847 - 3442884
Alignment:
Q  524 gcatagctaagttggtaggataatgcattattatatgt 561  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  3442847 gcatagctcagttggtaggacaatgcattattatatgt 3442884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 563
Target Start/End: Original strand, 20955492 - 20955541
Alignment:
Q  514 agttccgtgagcatagctaagttggtaggataatgcattattatatgtaa 563  Q
    ||||||||||||||| || ||||| ||||| |||| ||||||||||||||    
T  20955492 agttccgtgagcataactcagttgataggacaatgtattattatatgtaa 20955541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 33536226 - 33536267
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  33536226 tgagcatagctaagttggtaagacaatgcattattttatgta 33536267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 533 - 562
Target Start/End: Original strand, 35112721 - 35112750
Alignment:
Q  533 agttggtaggataatgcattattatatgta 562  Q
    ||||||||||||||||||||||||||||||    
T  35112721 agttggtaggataatgcattattatatgta 35112750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 635
Target Start/End: Original strand, 52560835 - 52560880
Alignment:
Q  590 cacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  52560835 cacttattcaccttataaggtgaattctagccactagactacctga 52560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 635
Target Start/End: Original strand, 2486 - 2604
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattc 616  Q
    ||||||||||| || ||||||||||| |||||||||||||||| |  |  |||| |||||||| | || |  ||||||||||| ||||| ||||||||||    
T  2486 ccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaattc 2585  T
Q  617 tagccgctaaactacctga 635  Q
     |||| ||| |||||||||    
T  2586 cagccactagactacctga 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 635
Target Start/End: Complemental strand, 43791 - 43676
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattcta 618  Q
    |||||||||||| ||||||||||| ||||||||||||||||  | |||||   || |||||||||| |  ||||||||||| ||||| ||||||| ||||    
T  43791 gtgagcatagctcagttggtaggacaatgcattattatatg-caggactggggttcgaacctcgaacaccccacttattcaccttataaggtgaaatcta 43693  T
Q  619 gccgctaaactacctga 635  Q
    ||  |||| ||||||||    
T  43692 gcaactaagctacctga 43676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 635
Target Start/End: Complemental strand, 29096403 - 29096287
Alignment:
Q  520 gtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtgaattcta 618  Q
    |||||||||||| ||||||||||| |||||||||||||||| || | | | | || ||||| | || |  ||||||||||| ||||| ||||||||||||    
T  29096403 gtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattcta 29096304  T
Q  619 gccgctaaactacctga 635  Q
    ||| |||  ||||||||    
T  29096303 gccactaggctacctga 29096287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 7645199 - 7645157
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  7645199 ccgtgagcatagcttagttggtaggacaatgcattattatatg 7645157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 18872519 - 18872561
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  18872519 ccgtgagcatagctcagttggtaggacaatgcattattatatg 18872561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 27219660 - 27219618
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  27219660 ccgtgagcatagcttagttggtaggacaatgcattattatatg 27219618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 621
Target Start/End: Original strand, 14487554 - 14487663
Alignment:
Q  513 gagttccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatcttatgaggtg 611  Q
    |||||||||||| |||  | ||||||||||| ||||||||||||||||||  |  ||   || ||||||| || || ||||||||||| ||||| |||||    
T  14487554 gagttccgtgaggataattcagttggtaggacaatgcattattatatgtaggggttggggttcgaacctcggatatcccacttattcaccttataaggtg 14487653  T
Q  612 aattctagcc 621  Q
    ||||||||||    
T  14487654 aattctagcc 14487663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 18478002 - 18478043
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  18478002 cgtgagcatagctcagttggtaggacaatgcattattatatg 18478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 621
Target Start/End: Complemental strand, 21017703 - 21017596
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatgtaatgactgaaatttgaacctc-gaaattccacttattcatctt---atgaggtgaa 613  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||| || |||   |||||||| | || || ||||||||||| |||   || |||||||    
T  21017703 ccgtgaacatagctcagttggtaggacaatgcattattatatgtagtggctggggtttgaaccccggacatcccacttattcaccttataataaggtgaa 21017604  T
Q  614 ttctagcc 621  Q
    ||||||||    
T  21017603 ttctagcc 21017596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 29841347 - 29841388
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  29841347 cgtgagcatagctcagttggtaggacaatgcattattatatg 29841388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 559
Target Start/End: Complemental strand, 26302593 - 26302549
Alignment:
Q  515 gttccgtgagcatagctaagttggtaggataatgcattattatat 559  Q
    |||||||||||||||||  |||||||||| |||||||||||||||    
T  26302593 gttccgtgagcatagctcggttggtaggacaatgcattattatat 26302549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 621
Target Start/End: Complemental strand, 30622361 - 30622281
Alignment:
Q  542 gataatgcattattatatgtaatgactgaaatttgaacctcgaa-attccacttattcatcttatgaggtgaattctagcc 621  Q
    ||||||| ||| ||||||||| ||| ||  |||||||| ||| | | |||||||||||| |||||||||||||||||||||    
T  30622361 gataatgtattgttatatgtagtgattgggatttgaacttcggatactccacttattcaccttatgaggtgaattctagcc 30622281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 562
Target Start/End: Original strand, 6014778 - 6014821
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatgta 562  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||    
T  6014778 cgtgaacatagctgagtttgtaggataatgcattattatatgta 6014821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 636
Target Start/End: Original strand, 21212964 - 21213011
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctgat 636  Q
    ||||||||| ||||||| |||||||||||||||  |||||||||||||    
T  21212964 ccacttatttatcttataaggtgaattctagccattaaactacctgat 21213011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Complemental strand, 27440392 - 27440353
Alignment:
Q  521 tgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  27440392 tgagcatagctcagttggtaggacaatgcattattatatg 27440353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 635
Target Start/End: Original strand, 29331312 - 29331359
Alignment:
Q  588 tccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||    
T  29331312 tccacttattcatcttataaggtgaattctagccactaggctacctga 29331359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 590 - 636
Target Start/End: Original strand, 6014850 - 6014896
Alignment:
Q  590 cacttattcatcttatgaggtgaattctagccgctaaactacctgat 636  Q
    |||||||||||||||| ||||||||||||||| |||  |||||||||    
T  6014850 cacttattcatcttataaggtgaattctagccactaggctacctgat 6014896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 19059101 - 19059059
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| ||||||||||| |||||||||| |||||    
T  19059101 ccgtgagcatagctcagttggtaggacaatgcattatcatatg 19059059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 22600032 - 22599990
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  22600032 ccgtgagcataactcagttggtaggacaatgcattattatatg 22599990  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 631
Target Start/End: Original strand, 23925613 - 23925655
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactac 631  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||    
T  23925613 ccacttattcatcttataaggtgaattctagccactagactac 23925655  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 522 - 560
Target Start/End: Original strand, 29050802 - 29050840
Alignment:
Q  522 gagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  29050802 gagcatagctcagttggtaggacaatgcattattatatg 29050840  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 29329021 - 29329063
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| |||||||| ||||||||||||| |||||    
T  29329021 ccgtgagcatagctcagttggtaagataatgcattatcatatg 29329063  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 33800891 - 33800933
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  33800891 ccgtgagcataactcagttggtaggacaatgcattattatatg 33800933  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 36888190 - 36888148
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  36888190 ccgtgagcatatctcagttggtaggacaatgcattattatatg 36888148  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 40339196 - 40339154
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| |||| |||||| ||||||||||||||||    
T  40339196 ccgtgagcatagctcagttagtaggacaatgcattattatatg 40339154  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 560
Target Start/End: Complemental strand, 42801538 - 42801496
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||| ||||||| |||||||| |||||||||||||||||||    
T  42801538 ccgtgatcatagctcagttggtatgataatgcattattatatg 42801496  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 635
Target Start/End: Complemental strand, 6671810 - 6671765
Alignment:
Q  590 cacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    |||||||||||||||| ||||||||||||||| ||| | |||||||    
T  6671810 cacttattcatcttataaggtgaattctagccactagattacctga 6671765  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 20699521 - 20699480
Alignment:
Q  519 cgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||    
T  20699521 cgtgaccatagctcagttggtaggacaatgcattattatatg 20699480  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 533 - 562
Target Start/End: Complemental strand, 38426842 - 38426813
Alignment:
Q  533 agttggtaggataatgcattattatatgta 562  Q
    ||||||||||||||||||||||||||||||    
T  38426842 agttggtaggataatgcattattatatgta 38426813  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 101829 - 101871
Alignment:
Q  518 ccgtgagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  101829 ccgtgagcatagctcagctggtaggataatgcattattatatg 101871  T

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Target: scaffold0191 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 522 - 560
Target Start/End: Original strand, 16849 - 16887
Alignment:
Q  522 gagcatagctaagttggtaggataatgcattattatatg 560  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  16849 gagcatagctcagttggtaggacaatgcattattatatg 16887  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 635
Target Start/End: Original strand, 49890 - 49936
Alignment:
Q  589 ccacttattcatcttatgaggtgaattctagccgctaaactacctga 635  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  49890 ccacttattcaacttataaggtgaattctagccactagactacctga 49936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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