View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8978_low_50 (Length: 296)

Name: NF8978_low_50
Description: NF8978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8978_low_50
NF8978_low_50
[»] scaffold0059 (1 HSPs)
scaffold0059 (23-202)||(69502-69681)
[»] chr4 (37 HSPs)
chr4 (20-202)||(40900050-40900227)
chr4 (23-202)||(32136634-32136808)
chr4 (24-202)||(6333259-6333432)
chr4 (24-149)||(40806833-40806958)
chr4 (24-202)||(50570920-50571098)
chr4 (24-200)||(10218621-10218797)
chr4 (24-202)||(29636716-29636894)
chr4 (39-148)||(5261980-5262089)
chr4 (24-160)||(29644129-29644265)
chr4 (24-202)||(42557667-42557845)
chr4 (27-148)||(52344683-52344799)
chr4 (24-148)||(43630520-43630644)
chr4 (21-148)||(48996024-48996151)
chr4 (24-118)||(31301238-31301332)
chr4 (24-148)||(30193991-30194116)
chr4 (24-148)||(36077515-36077639)
chr4 (26-202)||(51394663-51394829)
chr4 (38-148)||(23937534-23937644)
chr4 (21-162)||(23120259-23120400)
chr4 (220-285)||(5261726-5261791)
chr4 (42-148)||(8176613-8176714)
chr4 (24-113)||(5122435-5122524)
chr4 (39-140)||(13690872-13690973)
chr4 (25-113)||(48293456-48293544)
chr4 (221-285)||(51394977-51395041)
chr4 (24-113)||(20986364-20986453)
chr4 (24-105)||(32223378-32223459)
chr4 (25-149)||(48338285-48338408)
chr4 (29-148)||(23450000-23450119)
chr4 (24-113)||(36106470-36106560)
chr4 (24-109)||(45983326-45983411)
chr4 (24-128)||(4642364-4642468)
chr4 (20-113)||(48255656-48255751)
chr4 (38-69)||(35233369-35233400)
chr4 (28-86)||(41260219-41260277)
chr4 (24-69)||(18319646-18319691)
chr4 (24-69)||(18398990-18399035)
[»] scaffold0013 (2 HSPs)
scaffold0013 (23-202)||(128578-128757)
scaffold0013 (23-202)||(105971-106150)
[»] chr1 (31 HSPs)
chr1 (24-194)||(16529470-16529640)
chr1 (25-202)||(32953982-32954163)
chr1 (20-202)||(8211217-8211399)
chr1 (32-149)||(29388983-29389100)
chr1 (23-144)||(51252435-51252556)
chr1 (24-160)||(20493691-20493827)
chr1 (23-202)||(33910743-33910923)
chr1 (27-148)||(1161758-1161879)
chr1 (24-158)||(5155349-5155483)
chr1 (24-202)||(39256603-39256776)
chr1 (24-202)||(45691739-45691913)
chr1 (44-148)||(33474410-33474514)
chr1 (29-202)||(11898958-11899126)
chr1 (20-144)||(42789628-42789747)
chr1 (24-192)||(40095393-40095561)
chr1 (38-149)||(44918504-44918610)
chr1 (24-113)||(36203494-36203583)
chr1 (24-128)||(35980423-35980527)
chr1 (27-128)||(2490064-2490165)
chr1 (24-149)||(50471169-50471294)
chr1 (24-128)||(21685578-21685682)
chr1 (23-113)||(8165602-8165692)
chr1 (27-113)||(32910420-32910506)
chr1 (231-277)||(42789379-42789425)
chr1 (24-112)||(6248019-6248107)
chr1 (24-190)||(12973502-12973668)
chr1 (27-113)||(27507542-27507628)
chr1 (24-113)||(11074450-11074538)
chr1 (24-105)||(25560055-25560136)
chr1 (63-112)||(35375157-35375206)
chr1 (24-128)||(16062805-16062909)
[»] chr6 (15 HSPs)
chr6 (24-212)||(10494333-10494521)
chr6 (21-191)||(13810842-13811012)
chr6 (24-200)||(15859668-15859842)
chr6 (23-143)||(35040231-35040351)
chr6 (24-202)||(5874114-5874292)
chr6 (24-148)||(10590793-10590917)
chr6 (21-149)||(25136711-25136839)
chr6 (24-148)||(10391037-10391162)
chr6 (39-160)||(33550277-33550398)
chr6 (24-148)||(12270499-12270623)
chr6 (82-202)||(13801944-13802064)
chr6 (28-148)||(5287920-5288040)
chr6 (22-162)||(892342-892483)
chr6 (24-111)||(6266846-6266933)
chr6 (25-109)||(24645007-24645091)
[»] chr7 (40 HSPs)
chr7 (22-149)||(13852249-13852376)
chr7 (22-148)||(27054748-27054874)
chr7 (22-149)||(2408981-2409108)
chr7 (22-148)||(31983012-31983137)
chr7 (24-202)||(47069611-47069789)
chr7 (24-148)||(7209285-7209409)
chr7 (24-160)||(10671763-10671899)
chr7 (23-202)||(3213184-3213363)
chr7 (24-202)||(47204419-47204597)
chr7 (38-148)||(47903204-47903314)
chr7 (24-150)||(5932638-5932764)
chr7 (20-158)||(10069132-10069270)
chr7 (24-149)||(12117542-12117667)
chr7 (24-148)||(11206374-11206498)
chr7 (24-144)||(18673210-18673330)
chr7 (53-160)||(43429147-43429254)
chr7 (24-145)||(8768982-8769103)
chr7 (27-148)||(24361510-24361630)
chr7 (221-285)||(7760394-7760458)
chr7 (27-143)||(31876651-31876766)
chr7 (38-144)||(32823561-32823666)
chr7 (43-194)||(1335280-1335425)
chr7 (25-128)||(11834535-11834638)
chr7 (42-148)||(36507907-36508013)
chr7 (24-104)||(7205938-7206018)
chr7 (24-96)||(45898128-45898200)
chr7 (23-162)||(32942081-32942220)
chr7 (26-149)||(7760049-7760167)
chr7 (231-285)||(10069471-10069525)
chr7 (41-113)||(8118331-8118403)
chr7 (220-268)||(36508586-36508634)
chr7 (21-148)||(524882-525009)
chr7 (39-149)||(48675069-48675179)
chr7 (24-113)||(4153778-4153867)
chr7 (24-113)||(29628050-29628139)
chr7 (241-285)||(1335585-1335629)
chr7 (29-113)||(8568605-8568689)
chr7 (30-113)||(23032622-23032705)
chr7 (38-144)||(11216111-11216217)
chr7 (95-145)||(24361307-24361357)
[»] chr2 (24 HSPs)
chr2 (24-201)||(19937088-19937264)
chr2 (24-148)||(44979785-44979909)
chr2 (23-202)||(16578577-16578756)
chr2 (24-143)||(17916872-17916991)
chr2 (23-202)||(36413602-36413781)
chr2 (21-149)||(42785644-42785772)
chr2 (27-202)||(44035251-44035426)
chr2 (24-148)||(9811333-9811457)
chr2 (47-148)||(11375867-11375968)
chr2 (24-148)||(18356846-18356970)
chr2 (27-145)||(25298270-25298388)
chr2 (23-145)||(15320598-15320720)
chr2 (220-285)||(18357154-18357219)
chr2 (220-285)||(42785384-42785449)
chr2 (24-113)||(12041640-12041729)
chr2 (25-92)||(34910254-34910321)
chr2 (24-113)||(17762684-17762773)
chr2 (19-159)||(5862636-5862776)
chr2 (38-149)||(28790462-28790573)
chr2 (39-113)||(44085446-44085521)
chr2 (24-117)||(12841488-12841581)
chr2 (24-109)||(27301539-27301624)
chr2 (24-113)||(41461024-41461113)
chr2 (24-112)||(12884473-12884561)
[»] chr8 (17 HSPs)
chr8 (24-148)||(10661096-10661220)
chr8 (27-202)||(14549169-14549344)
chr8 (22-149)||(33068206-33068333)
chr8 (27-148)||(44672734-44672855)
chr8 (22-202)||(5803208-5803388)
chr8 (20-148)||(36910347-36910475)
chr8 (28-202)||(3006534-3006708)
chr8 (26-112)||(30392083-30392169)
chr8 (28-160)||(6200856-6200989)
chr8 (24-202)||(18633559-18633728)
chr8 (24-202)||(18169992-18170160)
chr8 (24-148)||(3681876-3681994)
chr8 (24-162)||(44336714-44336853)
chr8 (24-113)||(40436378-40436468)
chr8 (24-113)||(12883781-12883870)
chr8 (24-112)||(15272358-15272446)
chr8 (24-112)||(15452727-15452815)
[»] chr3 (23 HSPs)
chr3 (20-148)||(6004403-6004531)
chr3 (24-202)||(4669609-4669787)
chr3 (38-148)||(21586859-21586969)
chr3 (21-202)||(10369151-10369332)
chr3 (24-148)||(32880243-32880367)
chr3 (23-148)||(34794536-34794661)
chr3 (24-148)||(51149673-51149797)
chr3 (24-158)||(43030359-43030493)
chr3 (24-149)||(35402220-35402345)
chr3 (24-148)||(9827794-9827918)
chr3 (21-148)||(50562586-50562713)
chr3 (96-202)||(33360968-33361074)
chr3 (23-107)||(35532193-35532277)
chr3 (43-148)||(48032865-48032965)
chr3 (28-162)||(17144732-17144865)
chr3 (42-143)||(39097906-39098010)
chr3 (28-160)||(54121967-54122099)
chr3 (21-113)||(55467693-55467785)
chr3 (27-113)||(42363276-42363362)
chr3 (24-104)||(37044863-37044943)
chr3 (24-112)||(2832451-2832539)
chr3 (24-118)||(20038327-20038421)
chr3 (24-160)||(26291960-26292096)
[»] chr5 (31 HSPs)
chr5 (23-202)||(15068402-15068581)
chr5 (24-202)||(11917348-11917526)
chr5 (26-202)||(17085209-17085375)
chr5 (53-194)||(36177075-36177216)
chr5 (28-148)||(333293-333413)
chr5 (22-202)||(8408931-8409111)
chr5 (24-148)||(27886432-27886556)
chr5 (22-202)||(38433638-38433813)
chr5 (21-149)||(36103626-36103755)
chr5 (23-148)||(42544600-42544725)
chr5 (24-202)||(701162-701341)
chr5 (22-148)||(30001952-30002078)
chr5 (201-285)||(17085006-17085095)
chr5 (25-148)||(30265807-30265930)
chr5 (23-148)||(667630-667755)
chr5 (55-148)||(12166180-12166273)
chr5 (42-148)||(2226900-2227006)
chr5 (23-148)||(12681085-12681205)
chr5 (24-160)||(27572049-27572185)
chr5 (28-149)||(9160927-9161051)
chr5 (24-202)||(9988823-9988995)
chr5 (233-284)||(35359212-35359263)
chr5 (92-202)||(35358947-35359052)
chr5 (27-96)||(23780770-23780839)
chr5 (27-96)||(23867723-23867792)
chr5 (27-113)||(35240875-35240961)
chr5 (92-148)||(10174096-10174152)
chr5 (24-128)||(34881360-34881464)
chr5 (24-112)||(36567664-36567752)
chr5 (23-76)||(7487377-7487430)
chr5 (23-60)||(27111158-27111195)
[»] scaffold0308 (1 HSPs)
scaffold0308 (24-148)||(5899-6023)
[»] scaffold0029 (2 HSPs)
scaffold0029 (22-112)||(40637-40727)
scaffold0029 (119-149)||(40590-40620)
[»] scaffold0204 (2 HSPs)
scaffold0204 (24-114)||(14465-14555)
scaffold0204 (25-149)||(25807-25930)


Alignment Details
Target: scaffold0059 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 69681 - 69502
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || ||||||||||||||  |||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||  || ||||    
T  69681 ctaggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttcggttgattt 69582  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||| ||| ||| ||||  |||||||||||| |||||||    
T  69581 ttaaaaagtcatccaaaccaaaccaaaccaaatcaatgtggcttggattggttcggtttatgcggtttatcgcgagataa 69502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 40900227 - 40900050
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaa 119  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||||| || |    
T  40900227 taactaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcagttga 40900128  T
Q  120 tttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||||||     |||||| |  ||| ||| |||||||| ||||||||||||| |||||||    
T  40900127 tttttaaaaagtcatccaaaccaaaccaaa-----ccaatgcggtttggattggtttggtttgtgcggtttatcgcgagataa 40900050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 32136634 - 32136808
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||  ||||| |||||||||||| ||||||||||||| ||| ||||    
T  32136634 ctaggggtgtttgcagtgcggtttggttcggttttgaacataaaagtcacccaaacctcgagataaaaaagcatgcgatttggtttggttcgattgattt 32136733  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||| |||||||||||||||||||     |||||| |  ||| ||| ||| |||| |||||||||||||||||||||    
T  32136734 ttaaaaattcatccaaaccaaaccaaa-----ccaatgcggtttggattggttcggtttgtgcggtttatcgtgagataa 32136808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 6333259 - 6333432
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || ||||||||||||||  ||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||     || |||||    
T  6333259 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttgg-----ttgatttt 6333353  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||| ||||||||| |||||||||| |  ||| ||| ||| |||| ||||||||||||| |||||||    
T  6333354 taaaaagtcatccaaatcaaaccaaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataa 6333432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 40806958 - 40806833
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||  || |||||    
T  40806958 taggggtgtttgcggtgtggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcgatttggtttggttcggttgatttt 40806859  T
Q  124 taaaaagtcatccaaaccaaaccaaa 149  Q
    |||||| |||||||||||||||||||    
T  40806858 taaaaaatcatccaaaccaaaccaaa 40806833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 50571098 - 50570920
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  50571098 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 50570999  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  50570998 taaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 50570920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 10218621 - 10218797
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||| ||| |||||   |||| |||||||||||||||||||||| |||| || |||||    
T  10218621 taggggtgtttgcggtgcgttttggttcggttttgagcataaaagtcatctaaacctcaagataaaaaagcatgcggtttggtttgattcagttgatttt 10218720  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagat 200  Q
    || | |||||||||||| |||||||| |||||||||| |  ||| ||| ||| |||| || |||||||||| |||||    
T  10218721 tatatagtcatccaaacaaaaccaaaccaaaccaatgcggtttggattggttcggtttgtacggtttatcgcgagat 10218797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 29636716 - 29636894
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  29636716 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 29636815  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||| |||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  29636816 taaaaagccatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 29636894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 5262089 - 5261980
Alignment:
Q  39 tgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaa 138  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  5262089 tgcggtttgattcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttagttcagttgatttttaaaaagtcatccaa 5261990  T
Q  139 accaaaccaa 148  Q
    ||||||||||    
T  5261989 accaaaccaa 5261980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 29644265 - 29644129
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  | ||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  29644265 taggggtgttcgcggtgcggtttggttcggtttcaaacataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 29644166  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatg 160  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29644165 taaaaagtcatccaaaccaaaccaaaccaaaccaatg 29644129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 42557667 - 42557845
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | || ||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  42557667 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcattcaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 42557766  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||| |||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  42557767 taaaaagtcatccaaaccaaatcaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 42557845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 52344683 - 52344799
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    ||||||| || ||||||||||| |   |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |     ||||||||||||    
T  52344683 gggtgttcgcggtgcggtttgggttgattttgagcataaaagtcatccaaaccgtgagataaaaaagcatgcggtttggttcg-----attaatttttaa 52344777  T
Q  127 aaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||||||||    
T  52344778 aaagtcatccaaaccaaaccaa 52344799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 43630520 - 43630644
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||| ||||| || ||||||||||||||  ||||||| |||||||| |||||||||||||||| |||||  ||||||||||||||||||   || |||||    
T  43630520 taggagtgttcgcggtgcggtttggttcgattttgagtataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttggtttggttgatttt 43630619  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||| ||||||||    
T  43630620 taaaaagtcatccaaatcaaaccaa 43630644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 48996024 - 48996151
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    ||||||||||||| |||||| ||||||||||  |||| | ||||||| | |||||||||| || || |||||||||| |||||||||||||||  || ||    
T  48996024 aactaggggtgttcgcagtgtggtttggttcgattttaatcataaaaatcatccaaaccgcgaaataaaaaagcatgtggtttggtttggttcggttgat 48996123  T
Q  121 ttttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||| ||||||||||||||||    
T  48996124 ttttaaaaagttatccaaaccaaaccaa 48996151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 31301238 - 31301332
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaatta 118  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||| ||||    
T  31301238 taggggtgtttgcggtgcagtttggtttagttttgagcataaaagtcatccaaaccgcgagataaaaaaacatgcggtttggtttggttcgatta 31301332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 30194116 - 30193991
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaa-gcatgcggtttggtttggttcaattaattt 122  Q
    |||||||||| || |||||||||| ||| | ||| || | |||||| || ||||||||||||| ||||| |||||||||||||||||||||  || ||||    
T  30194116 taggggtgttcgcggtgcggtttgattcgggtttaagtaaaaaagtcattcaaaccgtgagataaaaaaagcatgcggtttggtttggttcggttgattt 30194017  T
Q  123 ttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||||||||||||    
T  30194016 ttaaaaagtcatccaaaccaaaccaa 30193991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 36077515 - 36077639
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | || ||||||| ||||  |||||| |||||||||||||||||||  || |||||    
T  36077515 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcattcaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatttt 36077614  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  36077615 taaaaagtcatccaaaccaaaccaa 36077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 51394663 - 51394829
Alignment:
Q  26 ggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttta 125  Q
    |||||||| || |||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| || ||     || |||||||    
T  51394663 ggggtgttcgcggtgcagtttggttcagttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttgattcgg-----ttgattttta 51394757  T
Q  126 aaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||| | | ||||||||     ||||||||||||||||  ||| |||  |||| |||||||||||| |||||||    
T  51394758 aaaagtctttccaaccaaac-----caaaccaatgtgactttgattggttcagttgatgcggtttatcgcgagataa 51394829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 23937644 - 23937534
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    |||||||||| || |||||||||||||||||| ||| ||||   ||||| |||||  |||||||||||||||||||  || |||||||||||||||||||    
T  23937644 gtgcggtttgatttagttttgagcataaaagtcatctaaactacgagataaaaaaatatgcggtttggtttggttcggttgatttttaaaaagtcatcca 23937545  T
Q  138 aaccaaaccaa 148  Q
    |||||||||||    
T  23937544 aaccaaaccaa 23937534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 23120400 - 23120259
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    ||||||||||||| || |||||||||| |||  ||||||   ||||||| |||| |||||  |||| |||||||||||||||||||||||||| ||| |     
T  23120400 aactaggggtgttcgcggtgcggtttgattcgattttgaaggtaaaagtcatccgaaccgcaagataaaaaagcatgcggtttggtttggttcgattgac 23120301  T
Q  121 ttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtg 162  Q
    ||| |||||  |||||||||||||||||| ||||| ||||||    
T  23120300 tttaaaaaaaacatccaaaccaaaccaaaccaaactaatgtg 23120259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 5261791 - 5261726
Alignment:
Q  220 atattgttctaccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  5261791 atattgttctgctttaatatagtcatgtattacctgtgtcataaactggcagaatatacctccaaa 5261726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 8176714 - 8176613
Alignment:
Q  42 ggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaacc 141  Q
    ||||| ||||| ||||||| |||||||| || ||||| || |||| |||| ||||||||||||||||||     || ||||||||||||||||| |||||    
T  8176714 ggtttagttcaattttgaggataaaagtcattcaaactgtaagataaaaacgcatgcggtttggtttgg-----ttgatttttaaaaagtcatctaaacc 8176620  T
Q  142 aaaccaa 148  Q
    |||||||    
T  8176619 aaaccaa 8176613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 5122524 - 5122435
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||| ||  |||||   |||| ||||||||||||||||| ||||||||    
T  5122524 taggggtgtttgcggtgcggtttggttcggttttgagggtaaaagtcatataaaccacaagataaaaaagcatgcggtttgatttggttc 5122435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 13690973 - 13690872
Alignment:
Q  39 tgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaa 138  Q
    |||||||||||||  |||| ||||||||||| |||||||||| ||||| | ||| ||| | ||||| |||| |||  || ||||||||||||||||||||    
T  13690973 tgcggtttggttcgattttaagcataaaagtcatccaaaccgcgagataataaaacatacagtttgatttgattcggttgatttttaaaaagtcatccaa 13690874  T
Q  139 ac 140  Q
    ||    
T  13690873 ac 13690872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 48293544 - 48293456
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||||| || |||| ||||||||| ||||||||  ||||||| |||| |||||  || | ||||||||||||||||||||||||||    
T  48293544 aggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttc 48293456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 51394977 - 51395041
Alignment:
Q  221 tattgttctaccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    ||||||||| | ||||||||||||| |||||||||||||||||||| ||| || |||||||||||    
T  51394977 tattgttctcctttaatatagtcatatattacatgtgtcataaactagcataaaataccaccaaa 51395041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 20986364 - 20986453
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||||||  ||||||||| ||| |||||||   ||||||| ||||||||||  |||| || ||| |||||||||||||||||||    
T  20986364 taggggtgtttgcgatgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagtatgcggtttggtttggttc 20986453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 32223459 - 32223378
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttgg 105  Q
    |||||||||| || |||||||||| ||| ||||||||  ||||||| ||||||| ||  |||| ||||||||||||||||||    
T  32223459 taggggtgttcgcggtgcggtttgattcggttttgaggttaaaagtcatccaaatcgaaagataaaaaagcatgcggtttgg 32223378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 48338285 - 48338408
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttt 124  Q
    |||||| ||||| |||| ||||||||| ||||| ||  ||||||| |||| |||||| |||| ||||| ||||| ||||||||||||||  || | ||||    
T  48338285 aggggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa-catgcagtttggtttggttcggttgactttt 48338383  T
Q  125 aaaaagtcatccaaaccaaaccaaa 149  Q
    ||||    |||||||||||||||||    
T  48338384 aaaataaaatccaaaccaaaccaaa 48338408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 23450119 - 23450000
Alignment:
Q  29 gtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaa 128  Q
    |||||||| |||| |||| |||| ||||||||  ||||||| |||| ||| |  |||| || ||| |||||||||||||||||||  |||| ||||||||    
T  23450119 gtgtttgcggtgcagtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaa 23450020  T
Q  129 agtcatccaaaccaaaccaa 148  Q
      | ||||| ||||||||||    
T  23450019 tataatccacaccaaaccaa 23450000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 36106560 - 36106470
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcgg-tttggtttggttc 113  Q
    ||||| |||| || |||||||||||||| ||||||||  ||||||| |||| |||||  |||| ||||| ||||||| |||||||||||||    
T  36106560 tagggatgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaaaaaacatgcggttttggtttggttc 36106470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 45983326 - 45983411
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttg 109  Q
    ||||||||||||  |||| ||||||||| | |||||  ||||||||||||  |||||  |||| ||||| ||||||||||||||||    
T  45983326 taggggtgtttgtggtgcagtttggttcggctttgaagataaaagttatctgaaccgcaagataaaaaatcatgcggtttggtttg 45983411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 4642364 - 4642468
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || || ||||||||||| ||||||||  |||||||||||| |||||  |||| || ||| |||  ||||| |||||||| ||| | |||    
T  4642364 taggggtgttggcggtacggtttggttcggttttgaggctaaaagttatccgaaccgcaagataaataagtatgtagtttgatttggttcgattgacttt 4642463  T
Q  124 taaaa 128  Q
    |||||    
T  4642464 taaaa 4642468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 48255656 - 48255751
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagat--taaaaagcatgcggtttggtttggttc 113  Q
    ||||||||||||||  | |||||||||||||||||||| ||  |||||||||||  ||||   ||||   ||||| ||||||||||||||||||||    
T  48255656 taactaggggtgttcacggtgcggtttggttcagttttaaggctaaaagttatctgaaccacaagataaaaaaaaacatgcggtttggtttggttc 48255751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 35233400 - 35233369
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagt 69  Q
    ||||||||||||||||||||||||||||||||    
T  35233400 gtgcggtttggttcagttttgagcataaaagt 35233369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 41260219 - 41260277
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagat 86  Q
    ||||||||  |||||||||||||| ||||||||||||||| | |||| ||||| |||||    
T  41260219 ggtgtttgtggtgcggtttggttcggttttgagcataaaaatcatcctaaccgcgagat 41260277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 18319691 - 18319646
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagt 69  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||    
T  18319691 taggggtgttcactgtgcggtttggttcagttttgagtataaaagt 18319646  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 18398990 - 18399035
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagt 69  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||    
T  18398990 taggggtgttcactgtgcggtttggttcagttttgagtataaaagt 18399035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 128578 - 128757
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||  |||| |||||||||| |||||||||||||||  || ||||    
T  128578 ctaggggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttctgttgattt 128677  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||| ||||||| |||| ||||| | |||| ||| ||| |||| ||||||||||||| |||||||    
T  128678 ttaaaaagtcatccaaaccgaaccaaaccaaatcaatgcggcttggattggttcggtttgtgcggtttatcgcgagataa 128757  T

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Target: scaffold0013; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 105971 - 106150
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || ||||||||||||||  ||||||||| |||||| ||||||||||  |||| |||||||||| |||||||||||||||  || ||||    
T  105971 ctaggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttcggttgattt 106070  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||| |||||||||||| ||||||| |||| ||||| | |||| ||| ||| |||| ||||||||||||| |||||||    
T  106071 ttaaaatgtcatccaaaccgaaccaaaccaaatcaatgcggcttgaattggttcggtttgtgcggtttatcgagagataa 106150  T

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Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 16529640 - 16529470
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||||||||||| ||||||||||||||  || |||||    
T  16529640 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgccgtttggtttggttcggttgatttt 16529541  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcg 194  Q
    ||||||||||| |||||||||||||| |||||||||| | |||| ||| ||| |||| |||||||||||||    
T  16529540 taaaaagtcattcaaaccaaaccaaaccaaaccaatgcggcttgaattggttcggtttgtgcggtttatcg 16529470  T

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Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 32953982 - 32954163
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttt 124  Q
    ||||||||| |  |||||||||||||| ||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||||||||||  || ||||||    
T  32953982 aggggtgttcgtggtgcggtttggttcggttttgaacataaaagtcatccaaacc-tgagataaaaaagcatgcggtttggtttggttcggttgattttt 32954080  T
Q  125 aaaaagtcatccaa-----accaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||     ||||||||||| |||||||||| | |||| ||| ||| |||| |||||||||||||||||||||    
T  32954081 aaaaagtcatccaaaccaaaccaaaccaaaccaaaccaatgcggcttggattggttcggtttgtgcggtttatcgtgagataa 32954163  T

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Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 8211217 - 8211399
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaa 119  Q
    |||||||||||||| || |||||||||||||  ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |    
T  8211217 taactaggggtgttcgcggtgcggtttggtttggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttga 8211316  T
Q  120 tttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  8211317 tttttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 8211399  T

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Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 29388983 - 29389100
Alignment:
Q  32 tttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagt 131  Q
    ||||| ||||||||||||||  ||||||||| |||||| |||||||||||||||| ||||||||||||||||| |||||||  ||| |||||||||||||    
T  29388983 tttgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgtgagataaaaaagcatgcggtttgatttggtttgattgatttttaaaaagt 29389082  T
Q  132 catccaaaccaaaccaaa 149  Q
    ||||||||||||||||||    
T  29389083 catccaaaccaaaccaaa 29389100  T

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Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 51252556 - 51252435
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || ||||||||||||||  |||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||   || ||||    
T  51252556 ctaggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttgggttgattt 51252457  T
Q  123 ttaaaaagtcatccaaaccaaa 144  Q
    ||||||||||||||||||||||    
T  51252456 ttaaaaagtcatccaaaccaaa 51252435  T

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Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 20493691 - 20493827
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||| ||||||||||||||||||||  || |||||    
T  20493691 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 20493790  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatg 160  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20493791 taaaaagtcatccaaaccaaaccaaaccaaaccaatg 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 33910923 - 33910743
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||| |||||||  | ||||| |||||||||| |||||| ||||||||  || ||||    
T  33910923 ctaggggtattcgcagtgcggtttggttcaggtttgagcataaaagtcatccaaaatgcgagataaaaaagcatgtggtttgatttggttcggttgattt 33910824  T
Q  123 ttaaaaagtcatcc-aaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||| |||||| ||||||||||||| |||||||||| |  ||  ||| ||| ||||  ||||||||||| ||||||||    
T  33910823 ttaaaaattcatccaaaaccaaaccaaatcaaaccaatgcggttttgattggttcggtttatgcggtttatcatgagataa 33910743  T

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Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 1161879 - 1161758
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    ||||||||||  ||||||||||||| |||||||||| |||||| |||| ||||| ||||| |||||||||| ||||||||||||||   || ||||||||    
T  1161879 gggtgtttgcgatgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagataaaaaagcatgtggtttggtttggtttggttgatttttaa 1161780  T
Q  127 aaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||||||||    
T  1161779 aaagtcatccaaaccaaaccaa 1161758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 5155483 - 5155349
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||  ||||  ||||||| | | |||||||||| ||||  |||||||||||| |||||||||||||  || |||||    
T  5155483 taggggtgttcgcggtgcggtttggtttggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgatttt 5155384  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaa 158  Q
    |||||||||||||||||||||||||| ||||||||    
T  5155383 taaaaagtcatccaaaccaaaccaaaccaaaccaa 5155349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 39256776 - 39256603
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| |  |||||||||||||| |||||||||| |||||| || | ||| | ||||| |||||||||||||||| |||||||||  || |||||    
T  39256776 taggggtgttcgtggtgcggtttggttctgttttgagcacaaaagtcattcgaactgcgagataaaaaagcatgcggtttagtttggttcggttgatttt 39256677  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||     |||||  | |||| ||| ||| |||| ||||||||||||||| |||||    
T  39256676 taaaaagtcatccaaaccaaaccaaa-----ccaatacggcttggattggttcggtttgtgcggtttatcgtgtgataa 39256603  T

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Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 45691739 - 45691913
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaag-catgcggtttggtttggttcaattaattt 122  Q
    |||||| |||||| |||||||||| |||||||||||||| ||| || |||||||||| || || |||||  ||||||||||||||||||||  || ||||    
T  45691739 taggggcgtttgcggtgcggtttgattcagttttgagcaaaaatgtcatccaaaccgcgaaataaaaaaaacatgcggtttggtttggttcggttgattt 45691838  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||| ||||     ||||| |||| |  ||| ||| ||| |||| |||||||||||||||||||||    
T  45691839 ttaaaaagtcatccaaactaaac-----caaactaatgcggtttggattggttcggtttgtgcggtttatcgtgagataa 45691913  T

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Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 44 - 148
Target Start/End: Original strand, 33474410 - 33474514
Alignment:
Q  44 tttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaa 143  Q
    ||||||||  ||||||||| |||| | |||||||| ||||||| |||||||||||||||| |||||||||  || ||||| |||||||||||||||||||    
T  33474410 tttggttcgattttgagcaaaaaaatcatccaaactgtgagataaaaaagcatgcggtttagtttggttcggttgattttaaaaaagtcatccaaaccaa 33474509  T
Q  144 accaa 148  Q
    |||||    
T  33474510 accaa 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 11898958 - 11899126
Alignment:
Q  29 gtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaa 128  Q
    ||||| || |||||||||| ||| |||||||||| |||||| |||||||||| | ||| ||||| ||||     |||||||||||  || ||||||||||    
T  11898958 gtgttcgcggtgcggtttgattcggttttgagcaaaaaagtcatccaaaccgcgcgataaaaaaacatg-----tggtttggttcggttgatttttaaaa 11899052  T
Q  129 agtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    | |||||||||||||||||||  ||||||||  |  ||| ||| ||| |||| ||||||||||||| |||||||    
T  11899053 aatcatccaaaccaaaccaaactaaaccaatacggtttggattggttcggtttgtgcggtttatcgcgagataa 11899126  T

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Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 42789747 - 42789628
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaa 119  Q
    |||||||||||||| || |||||||||||| |  |||| ||||||||||| || ||||||| ||||| |||||||||||      |||||||||| || |    
T  42789747 taactaggggtgttcgcggtgcggtttggtacgattttaagcataaaagtcattcaaaccgcgagataaaaaagcatgc-----agtttggttcagttga 42789653  T
Q  120 tttttaaaaagtcatccaaaccaaa 144  Q
    |||||||||||||||||||||||||    
T  42789652 tttttaaaaagtcatccaaaccaaa 42789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 40095561 - 40095393
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||||||  |||||||||||| |||||  |||| || ||  ||||||||||| ||| |||  || |||||    
T  40095561 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagataaataaatatgcggtttggcttgtttcggtttatttt 40095462  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttat 192  Q
    |||||    |  |||||||||||||| ||||||||||||  ||| ||| | | ||||||||||||||||    
T  40095461 taaaataaaactcaaaccaaaccaaaccaaaccaatgtggtttggattggatcggttggtgcggtttat 40095393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 44918504 - 44918610
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    ||||||||||||||  |||||||||||||||| | |||||| |  |||| |||||||||||||||||||| |||| |     ||||||||||||||||||    
T  44918504 gtgcggtttggttcgattttgagcataaaagtcacccaaactgcaagataaaaaagcatgcggtttggttcggttga-----tttttaaaaagtcatcca 44918598  T
Q  138 aaccaaaccaaa 149  Q
    ||| ||||||||    
T  44918599 aacgaaaccaaa 44918610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 36203583 - 36203494
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || ||||| |||||||| ||||||||  ||||||| ||||||||||  |||| ||||||||||||||||| ||||||||    
T  36203583 taggggtgttcgcggtgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagataaaaaagcatgcggtttgatttggttc 36203494  T

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Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 35980527 - 35980423
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||| |||| |||||  || | |||||||||| |||||||||| |||| ||| | |||    
T  35980527 taggggtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgttcgattgacttt 35980428  T
Q  124 taaaa 128  Q
    |||||    
T  35980427 taaaa 35980423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 2490165 - 2490064
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    |||||||||| |||| |||||||||  |||||||  |||||||||||| |||||  |||| || ||| ||||| |||||||||||||| || | ||||||    
T  2490165 gggtgtttgcggtgcagtttggttcgattttgaggctaaaagttatccgaaccgcaagataaataagtatgcgatttggtttggttcagttgacttttaa 2490066  T
Q  127 aa 128  Q
    ||    
T  2490065 aa 2490064  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 50471169 - 50471294
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| ||||||||| || ||||  ||||||   ||||||| |||| |||||| | || |||||| |||||||||||||||||||| ||   |||    
T  50471169 taggggtgttcgcagtgcgggtttgttcgattttgatgctaaaagtcatccgaaccgtaaaataaaaaagtatgcggtttggtttggttcagttgcattt 50471268  T
Q  124 taaaaagtcatccaaaccaaaccaaa 149  Q
    |||||    |||||||||||||||||    
T  50471269 taaaataaaatccaaaccaaaccaaa 50471294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 21685682 - 21685578
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| |||| ||||||||| ||||| ||  ||||||| |||  |||||  ||||  ||| |||||||||||||||||||||| || | |||    
T  21685682 taggggtgtttgcggtgcagtttggttcggttttaaggctaaaagtcatctgaaccgcaagatacaaatgcatgcggtttggtttggttcagttgacttt 21685583  T
Q  124 taaaa 128  Q
    |||||    
T  21685582 taaaa 21685578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 8165692 - 8165602
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||||||| ||||||||| ||||||||||||   ||||| | |||| |||||   ||| || ||||||||||||||||| |||||    
T  8165692 ctaggggtgtttgcggtgcggtttagttcagttttgaaggtaaaaatcatccgaaccgcaggataaagaagcatgcggtttggttcggttc 8165602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 32910506 - 32910420
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| ||| |  ||||||| |||||||| |||||||| |||||||| |  |||| ||||| ||||| ||||||||||||||    
T  32910506 gggtgtttgcggtgtgtgttggttcggttttgaggataaaagtcatccaaactgcaagataaaaaaacatgcagtttggtttggttc 32910420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 42789425 - 42789379
Alignment:
Q  231 ccttaatatagtcatgtattacatgtgtcataaactggcagaacata 277  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  42789425 ccttagtatagtcatgtattacatgtgttataaattggcagaacata 42789379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 6248019 - 6248107
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    |||||||||| ||||||||||||| ||   |||||||  ||||||| ||||||||||  |||  || ||| ||||||||||||||||||    
T  6248019 taggggtgttcgcagtgcggtttgatttgattttgagactaaaagtcatccaaaccgcaagaaaaataagtatgcggtttggtttggtt 6248107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 12973502 - 12973668
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| |||||||   | ||||| |||| |||||  |||| || ||  ||||||||||||||||||   || |||||    
T  12973502 taggggtgttcgcggtgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaatatgcggtttggtttggtttggttgatttt 12973601  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggttt 190  Q
     ||||    |||| || ||||||||| ||||| ||||||  ||| ||| | | ||||||||||||||    
T  12973602 gaaaataaaatccgaatcaaaccaaaccaaactaatgtggtttggattggatcggttggtgcggttt 12973668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 27507628 - 27507542
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||| || |||||||||||||| |||||||| |||||||| |||| |||||  |||| || ||| ||||  |||||||| ||||    
T  27507628 gggtgttcgcggtgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagtatgcaatttggtttagttc 27507542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 11074538 - 11074450
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || |||||||||||||| | ||||||  |||||||  ||| |||| | |||| ||||| ||| ||||||||||||||||    
T  11074538 taggggtgttcgcggtgcggtttggttc-gatttgagggtaaaagtcttccgaaccttaagataaaaaaacatacggtttggtttggttc 11074450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 25560136 - 25560055
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttgg 105  Q
    |||||||||| || ||||| ||||||||  |||||||  ||||||| || | |||||| |||| |||||| |||||||||||    
T  25560136 taggggtgttcgcggtgcgttttggttcgattttgaggttaaaagtcattcgaaccgtaagataaaaaagtatgcggtttgg 25560055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 35375157 - 35375206
Alignment:
Q  63 taaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    |||||||||| | |||||| ||||||||||||||||||| | ||||||||    
T  35375157 taaaagttattcgaaccgtaagattaaaaagcatgcggtatagtttggtt 35375206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 16062805 - 16062909
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| |  |||||||||||||| |||||||| |||||| | ||   |||||| ||||||| ||| ||  ||||||||||| |||| || | |||    
T  16062805 taggggtgttcgttgtgcggtttggttcggttttgagaataaaattcatttgaaccgtaagattaataagtatctggtttggtttgattcagttgacttt 16062904  T
Q  124 taaaa 128  Q
    |||||    
T  16062905 taaaa 16062909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 10494521 - 10494333
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||||  || |||||    
T  10494521 taggggtgtttgcggtgcggtttggtttggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatggggtttgatttggttcggttgatttt 10494422  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataacttttatttt 212  Q
    ||||||||||||||||| ||||||||  ||||||||| | |||  ||| ||| ||||| |||||||||||| ||||||| |||| ||||    
T  10494421 taaaaagtcatccaaactaaaccaaactaaaccaatgcggcttagattggttcggttgatgcggtttatcgcgagataatttttttttt 10494333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 13811012 - 13810842
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    ||||||||||||| || ||| |||||||||  |||||||||| |||||| |||||||||| ||||| ||||||||| ||||||||||||||||| || ||    
T  13811012 aactaggggtgttcgcggtgaggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatacggtttggtttggttcagttgat 13810913  T
Q  121 ttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggttta 191  Q
    ||||||||||||||||||||||||||||| |||||||||| |  ||| ||| ||| |||| ||||||||||    
T  13810912 ttttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcggtttgtgcggttta 13810842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 15859668 - 15859842
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||| ||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| |||  || |||||    
T  15859668 taggggtgttcgcggtgccgtttggttcggttttgagcataaaagtcttccaaaccgcgagattaaaaagcatgcggtttggtttgattcggttgatttt 15859767  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagat 200  Q
    |||| ||||||||||||||||||  | |||||||||| |  ||| ||| ||| |||| ||||||||||||| |||||    
T  15859768 taaatagtcatccaaaccaaacc--accaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagat 15859842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 35040351 - 35040231
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||   || ||||    
T  35040351 ctaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttggttgattt 35040252  T
Q  123 ttaaaaagtcatccaaaccaa 143  Q
    |||||||||||||||||||||    
T  35040251 ttaaaaagtcatccaaaccaa 35040231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 5874292 - 5874114
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  5874292 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 5874193  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  5874192 taaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 5874114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 10590793 - 10590917
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||| | || |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||||  || |||||    
T  10590793 taggggtggtcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 10590892  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||| |||||||||||    
T  10590893 taaaaagtcatcccaaccaaaccaa 10590917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 25136711 - 25136839
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    |||||||||||||  | |||||||||||||| |||||||||||| |||| |||||||| |||| || ||||||||||||||| ||||||||||  ||       
T  25136711 aactaggggtgttcacggtgcggtttggttcggttttgagcatacaagtgatccaaacagtgaaataaaaaagcatgcggttcggtttggttcggttgga 25136810  T
Q  121 ttttaaaaagtcatccaaaccaaaccaaa 149  Q
    |||||||||||||||||||||||||||||    
T  25136811 ttttaaaaagtcatccaaaccaaaccaaa 25136839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 10391162 - 10391037
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt- 122  Q
    |||||||||| || ||| |||||||||| ||||||||||||||||| || | ||||| ||||| ||||||||||| ||||||||||||||| || ||||     
T  10391162 taggggtgttcgcggtgtggtttggttcggttttgagcataaaagtcattcgaaccgcgagataaaaaagcatgctgtttggtttggttcacttgatttc 10391063  T
Q  123 ttaaaaagtcatccaaaccaaaccaa 148  Q
    | ||||||||||||||||||||||||    
T  10391062 taaaaaagtcatccaaaccaaaccaa 10391037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 33550277 - 33550398
Alignment:
Q  39 tgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaa 138  Q
    ||||||||| ||| ||||||||||||||||| |||||||||| | ||| ||||| ||||  |||| |||||||||  || ||||||||||||||||||||    
T  33550277 tgcggtttgattcggttttgagcataaaagtcatccaaaccgagggataaaaaaacatgatgtttagtttggttcggttgatttttaaaaagtcatccaa 33550376  T
Q  139 accaaaccaaaacaaaccaatg 160  Q
    ||||||||||| ||||||||||    
T  33550377 accaaaccaaaccaaaccaatg 33550398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 12270499 - 12270623
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  | ||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  12270499 taggggtgttcgcggtgcggtttggttcggtttcaaacataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 12270598  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  12270599 taaaaagtcatccaaaccaaaccaa 12270623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 13802064 - 13801944
Alignment:
Q  82 gagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttg 181  Q
    ||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |  ||| ||| ||| ||||     
T  13802064 gagataaaaaagcatacggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcggttt 13801965  T
Q  182 gtgcggtttatcgtgagataa 202  Q
    | |||||||| ||||||||||    
T  13801964 gagcggtttagcgtgagataa 13801944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 5288040 - 5287920
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaa 127  Q
    |||||| || |||||||||||||| |||||||||||  |||| |||||||| | ||||| || || ||||| ||||||||||||||  || |||||||||    
T  5288040 ggtgttcgcggtgcggtttggttcggttttgagcatttaagtcatccaaactgcgagataaataaacatgcagtttggtttggttcggttgatttttaaa 5287941  T
Q  128 aagtcatccaaaccaaaccaa 148  Q
    ||||||||||||| |||||||    
T  5287940 aagtcatccaaacgaaaccaa 5287920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 892483 - 892342
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    ||||| |||||| || ||||||||||||||| |||| ||  ||||||| |||| |||||  | || ||||| ||||||||||||||||||||  |||| |    
T  892483 actagaggtgttcgcggtgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaacatgcggtttggtttggttcggttaact 892384  T
Q  122 tttaaaaagtcatccaaaccaaaccaaa-acaaaccaatgtg 162  Q
    |||||||   ||||| ||| |||||||| | |||||||||||    
T  892383 tttaaaataacatccgaactaaaccaaacaaaaaccaatgtg 892342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 6266846 - 6266933
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggt 111  Q
    |||| ||||| || |||||||||||| | ||||||||  ||| ||| |||| |||||| | || ||||| ||||||||||||||||||    
T  6266846 taggagtgttcgcggtgcggtttggtacggttttgaggttaatagtcatccgaaccgtaaaataaaaaaacatgcggtttggtttggt 6266933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 24645091 - 24645007
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttg 109  Q
    ||||||||| |  ||||||||||||||  |||||||  ||||||| |||| |||||  |||| || ||| |||||||||||||||    
T  24645091 aggggtgttcgttgtgcggtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggtttg 24645007  T

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Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 13852249 - 13852376
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||||  || |||    
T  13852249 actaggggtgtttgcagtgtggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatt 13852348  T
Q  122 tttaaaaagtcatccaaaccaaaccaaa 149  Q
    ||||||||||||||||||||||||||||    
T  13852349 tttaaaaagtcatccaaaccaaaccaaa 13852376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 27054874 - 27054748
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    ||||||||||||||| |||||||||||||  |||||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||  || |||    
T  27054874 actaggggtgtttgcggtgcggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatt 27054775  T
Q  122 tttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||| |||||||||||||||||    
T  27054774 tttaaaaagccatccaaaccaaaccaa 27054748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 2409108 - 2408981
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    ||||||||| || |||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||| |||    
T  2409108 actaggggtattcgcagtgcggtttggtttaattttgagcataaaagtcatccaaaccgtgagataaaaaaccatgcggtttggtttgattcaattgatt 2409009  T
Q  122 tttaaaaagtcatccaaaccaaaccaaa 149  Q
    |||||||||| || ||||| ||||||||    
T  2409008 tttaaaaagttattcaaactaaaccaaa 2408981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 31983137 - 31983012
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    |||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||  |||| ||||||||||||||| || |||    
T  31983137 actaggggtgttcgcggtgcggtt-ggttcggttttgagcataaaagttatccaaaccgcgagataaaaaaatatgcagtttggtttggttcagttgatt 31983039  T
Q  122 tttaaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||||    
T  31983038 tttaaaaagtcatccaaaccaaaccaa 31983012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 47069611 - 47069789
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  47069611 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 47069710  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  47069711 taaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 47069789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 7209409 - 7209285
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| ||||||||||||||||| |||||||  |||||||| |||||||||  ||||| ||||||||| ||||||||||||||||  || |||||    
T  7209409 taggggtgttcgcagtgcggtttggttcggttttgaatataaaagtcatccaaaccacgagataaaaaagcatacggtttggtttggttcggttgatttt 7209310  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  7209309 taaaaagtcatccaaaccaaaccaa 7209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 10671763 - 10671899
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  10671763 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 10671862  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatg 160  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10671863 taaaaagtcatccaaaccaaaccaaaccaaaccaatg 10671899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 3213363 - 3213184
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || ||||    
T  3213363 ctaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgattt 3213264  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||| ||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  3213263 ttaaaaagtcatccaaatcaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 3213184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 47204597 - 47204419
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  47204597 taggggtgttcgcggtgcggtttggttcggtttcaagcataacaatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 47204498  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||| |||| ||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  47204497 taaaaagtcatccaaaccaaaccaaaccaaatcaatgcggtttgaattggttcagttgatgcggttaatcgcgagataa 47204419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 47903204 - 47903314
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    |||||||||||||| ||||| ||||||||| | |||||||||| ||||| ||||||||||||||||||||||||||  || |||||||||||||||||||    
T  47903204 gtgcggtttggttcggttttaagcataaaaatcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaaagtcatcca 47903303  T
Q  138 aaccaaaccaa 148  Q
    |||||||||||    
T  47903304 aaccaaaccaa 47903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 5932638 - 5932764
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||| ||||||| |||||||||| ||| ||||||||||||||||| |||  ||||| ||||| | ||||||||||||||||||||||| | || |||||    
T  5932638 tagggatgtttgcggtgcggtttgattcggttttgagcataaaagtcatctgaaccgcgagataagaaagcatgcggtttggtttggttaagttgatttt 5932737  T
Q  124 taaaaagtcatccaaaccaaaccaaaa 150  Q
    |||||||||||||||||||||| ||||    
T  5932738 taaaaagtcatccaaaccaaacaaaaa 5932764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 10069132 - 10069270
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaa 119  Q
    |||||| || |||| || |||||||||||||| ||||||||||||||||| ||| |||||| || || ||||| ||||| |||||||||| |||  || |    
T  10069132 taactaaggatgttcgcggtgcggtttggttcggttttgagcataaaagtcatctaaaccgcgatataaaaaaacatgctgtttggtttgattcggttga 10069231  T
Q  120 tttttaaaaagtcatccaaaccaaaccaaaacaaaccaa 158  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  10069232 tttttaaaaagtcattcaaaccaaaccaaaccaaaccaa 10069270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 12117542 - 12117667
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| |||||||||||||| ||||  || |||| | | |||||||||| ||||  ||||||||||| ||||||||||||||  || |||||    
T  12117542 taggggtgtttgcggtgcggtttggttcggtttcaagtataataatcatccaaaccgcgagagaaaaaagcatgcagtttggtttggttcggttgatttt 12117641  T
Q  124 taaaaagtcatccaaaccaaaccaaa 149  Q
    ||||||||||||||||||||||||||    
T  12117642 taaaaagtcatccaaaccaaaccaaa 12117667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 11206498 - 11206374
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||| ||||||||||||||||||||  || |||||    
T  11206498 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 11206399  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  11206398 taaaaagtcatccaaaccaaaccaa 11206374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 18673330 - 18673210
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||| ||||| |||||||||| | |||||||| ||||| || | |||    
T  18673330 taggggtgttcgcggtgcgatttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtgatttggtttagttcagttgaattt 18673231  T
Q  124 taaaaagtcatccaaaccaaa 144  Q
     ||||||||||||||||||||    
T  18673230 caaaaagtcatccaaaccaaa 18673210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 43429147 - 43429254
Alignment:
Q  53 gttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaaaaca 152  Q
    |||| |||||||||||| |||||||||| ||||| |||| ||| |||||||||||||||||  || |||||||||||||||||||||| |||||||| ||    
T  43429147 gtttggagcataaaagtcatccaaaccgcgagataaaaatgcacgcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaaccaaacca 43429246  T
Q  153 aaccaatg 160  Q
    ||||||||    
T  43429247 aaccaatg 43429254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 8769103 - 8768982
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  || |||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  8769103 taggggtgttcgcggtgcggtttggttcggtttcaagtataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 8769004  T
Q  124 taaaaagtcatccaaaccaaac 145  Q
    ||||||||||||||||||||||    
T  8769003 taaaaagtcatccaaaccaaac 8768982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 24361630 - 24361510
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    |||| ||||| |||||||||||||| |||||||| | |||||| ||| |||||||||||| ||||| |||| |||||||||||||||| || ||||| ||    
T  24361630 gggtatttgcggtgcggtttggttcggttttgagaa-aaaagtcatctaaaccgtgagataaaaaaacatgtggtttggtttggttcagttgattttaaa 24361532  T
Q  127 aaagtcatccaaaccaaaccaa 148  Q
    ||| ||||||||||||||||||    
T  24361531 aaaatcatccaaaccaaaccaa 24361510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 7760394 - 7760458
Alignment:
Q  221 tattgttctaccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7760394 tattgttctgccttaatatagtcatgtattacatgtatcataaactggcagaacataccaccaaa 7760458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 31876766 - 31876651
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    ||||||| || |||||||||| ||| ||||||||||||||||| |||||||||| || || ||||||||||| |||||||| |||||  || ||||||||    
T  31876766 gggtgttcgcggtgcggtttg-ttcggttttgagcataaaagtcatccaaaccgcgaaataaaaaagcatgcagtttggttcggttcggttgatttttaa 31876668  T
Q  127 aaagtcatccaaaccaa 143  Q
    |||||||| ||||||||    
T  31876667 aaagtcattcaaaccaa 31876651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 32823561 - 32823666
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    |||| |||||||||  |||| ||||||||||| ||||||| || ||||| |||||||||||||||||| |||||||  || |||||||||||||||||||    
T  32823561 gtgctgtttggttcgatttttagcataaaagtcatccaaatcgcgagataaaaaagcatgcggtttgg-ttggttcggttgatttttaaaaagtcatcca 32823659  T
Q  138 aaccaaa 144  Q
    |||||||    
T  32823660 aaccaaa 32823666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 1335280 - 1335425
Alignment:
Q  43 gtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaacca 142  Q
    ||||||||| ||||||||||||||||| |||||| |   ||||| ||||||||   |||||||||||||||  || |||||||||||||| |||||||||    
T  1335280 gtttggttcggttttgagcataaaagtcatccaa-ctacgagataaaaaagcacctggtttggtttggttcggttgatttttaaaaagtcctccaaacca 1335378  T
Q  143 aaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcg 194  Q
    ||||||| |||     || | |||| ||| ||| ||||||||||||||||||    
T  1335379 aaccaaatcaa-----tgcggcttggattagttcggttggtgcggtttatcg 1335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 11834638 - 11834535
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttt 124  Q
    ||||||||||| ||||||||||||||| ||| || || |||||||||||| |||    |||| || ||| ||||||||||||||||||||||| ||||||    
T  11834638 aggggtgtttgaagtgcggtttggttcggttgtgtgcctaaaagttatccgaactacaagataaataagtatgcggtttggtttggttcaattgattttt 11834539  T
Q  125 aaaa 128  Q
    ||||    
T  11834538 aaaa 11834535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 36507907 - 36508013
Alignment:
Q  42 ggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaacc 141  Q
    |||||||||||| ||| ||||| ||||| |||||||  |||||||  |||| ||||| ||||| |||| |||  || |||||||||||||||||||||||    
T  36507907 ggtttggttcagatttaagcattaaagtcatccaaattgtgagatagaaaatcatgcagtttgatttgattcggttgatttttaaaaagtcatccaaacc 36508006  T
Q  142 aaaccaa 148  Q
    |||||||    
T  36508007 aaaccaa 36508013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 7206018 - 7205938
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttg 104  Q
    |||||||||| |||||| |||||||||| ||||||| |||| |||| |||||||||| ||||| ||||| |||||||||||    
T  7206018 taggggtgttcgcagtgtggtttggttcggttttgaacatagaagtcatccaaaccgcgagataaaaaaacatgcggtttg 7205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 45898200 - 45898128
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcat 96  Q
    |||||||||| || |||||||||||||| |||||| |||||||||| |||||||||| ||||| |||||||||    
T  45898200 taggggtgttcgcggtgcggtttggttcggttttgtgcataaaagtcatccaaaccgcgagataaaaaagcat 45898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 32942220 - 32942081
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||| ||||||||| ||||||||  ||||||| |||| ||| |  |||| ||||| |||||||||||||||| |||  || | ||    
T  32942220 ctaggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaactgcaagataaaaaaacatgcggtttggtttgattcggttgactt 32942121  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtg 162  Q
    ||||||    |||| |||||||||||| ||||||||||||    
T  32942120 ttaaaatacaatccgaaccaaaccaaaccaaaccaatgtg 32942081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 7760049 - 7760167
Alignment:
Q  26 ggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttta 125  Q
    |||||||| || ||| ||||||||||  |||||||||||||| | |||||||| ||||||| |||||| || | |||||||||||     || |||||||    
T  7760049 ggggtgttcgcggtgtggtttggttcgattttgagcataaaaatcatccaaactgtgagataaaaaagtatccagtttggtttgg-----ttgattttta 7760143  T
Q  126 aaaagtcatccaaaccaaaccaaa 149  Q
    |||||||||| ||| |||| ||||    
T  7760144 aaaagtcatctaaatcaaatcaaa 7760167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 10069471 - 10069525
Alignment:
Q  231 ccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||    
T  10069471 ccttaatataatcatgtattacctgtgtcataaactggtagaacacaccaccaaa 10069525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 8118403 - 8118331
Alignment:
Q  41 cggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||||||| ||||||||  ||||| |||||| |||||  |||| |||||||||| |||||||||||||||    
T  8118403 cggtttggttctgttttgagggtaaaatttatccgaaccgcaagataaaaaagcatgtggtttggtttggttc 8118331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 36508586 - 36508634
Alignment:
Q  220 atattgttctaccttaatatagtcatgtattacatgtgtcataaactgg 268  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||    
T  36508586 atattgttttgccttaatataatcatgtattacatgtgtcataaactgg 36508634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 525009 - 524882
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    |||||||||||||  | |||| |||||||||| |||| ||  |||||||||||  |||||  |||| |||||  ||||||||||||||| ||| ||| |     
T  525009 aactaggggtgttcacggtgcagtttggttcatttttaaggctaaaagttatctgaaccgcaagataaaaaaatatgcggtttggtttgattcgattgac 524910  T
Q  121 ttttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||    ||||||||||||||||    
T  524909 ttttaaaataaaatccaaaccaaaccaa 524882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 48675069 - 48675179
Alignment:
Q  39 tgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaa 138  Q
    ||||||||| ||| ||||||  ||||||  | | ||||||||  |||| |||||||| | |||||| ||||||||  || |||||||| |||||||||||    
T  48675069 tgcggtttgcttcggttttggacataaatttcacccaaaccgcaagataaaaaagcacgtggtttgatttggttcggttgatttttaagaagtcatccaa 48675168  T
Q  139 accaaaccaaa 149  Q
     ||||||||||    
T  48675169 gccaaaccaaa 48675179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 4153867 - 4153778
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||||||| | |||||||||| ||||||||||||  ||||||| || | |||   | ||| |||||||||||||| |||||||||||    
T  4153867 taggggtgtttacggtgcggtttgattcagttttgaggctaaaagtcattcgaacaacgggataaaaaagcatgcggtatggtttggttc 4153778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 29628050 - 29628139
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || |||||||||||||| ||||||||   ||||| ||||| |||||  || | ||||| ||||||||||| ||||||||    
T  29628050 taggggtgttcgcggtgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaacatgcggtttgatttggttc 29628139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 1335585 - 1335629
Alignment:
Q  241 gtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||    
T  1335585 gtcatgtattaccagtgtcataaactcgcagaacataccaccaaa 1335629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 8568689 - 8568605
Alignment:
Q  29 gtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||| || |||||||||||||| ||||||||  ||||||| |||| |||||  |||| || ||| ||||||||||||| |||||    
T  8568689 gtgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggttcggttc 8568605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 23032622 - 23032705
Alignment:
Q  30 tgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||| ||||||||||||||||| |||||  ||||||| |||  |||||  |||| |||||| ||| ||||| |||||||||    
T  23032622 tgtttgctgtgcggtttggttcagtgttgaggctaaaagtcatctgaaccgaaagataaaaaagtatgtggtttagtttggttc 23032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 11216111 - 11216217
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    |||| |||||||||  |||||||||||||| | || | ||| ||||||| ||||| |||| |||||| |||  ||  ||| |||||||||||||  ||||    
T  11216111 gtgcagtttggttcgattttgagcataaaaatcattcgaactgtgagataaaaaaacatgtggtttgatttaatttgattgatttttaaaaagttgtcca 11216210  T
Q  138 aaccaaa 144  Q
    |||||||    
T  11216211 aaccaaa 11216217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 24361357 - 24361307
Alignment:
Q  95 atgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaac 145  Q
    |||||||||||||||||||  |||||||  ||||| |||||||||||||||    
T  24361357 atgcggtttggtttggttcggttaatttaaaaaaaatcatccaaaccaaac 24361307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 19937264 - 19937088
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||  | ||||||||||||||| |||||||||| ||||| ||||| |||| ||||||||||||||| ||| |||||    
T  19937264 taggggtgttcgcggtgcggtttggttaggatttgagcataaaagtcatccaaaccgcgagataaaaaaacatg-ggtttggtttggttcgattgatttt 19937166  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagata 201  Q
    |||||||||||||||| ||||||||| |||||||||| |  ||| ||| |||||||  ||||||||||||||||||||    
T  19937165 taaaaagtcatccaaatcaaaccaaagcaaaccaatgcggtttggattggtttggtgtgtgcggtttatcgtgagata 19937088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 44979909 - 44979785
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||  || |||||    
T  44979909 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 44979810  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  44979809 taaaaagtcatccaaaccaaaccaa 44979785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 16578577 - 16578756
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| ||  ||||||||||||| ||||  ||||||| | | |||||||||| ||||  |||||||||||||||||||||||||| ||| ||||    
T  16578577 ctaggggtgttcgcgatgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcgattgattt 16578676  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  16578677 ttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 16578756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 17916991 - 17916872
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || ||||| |||||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||  || |||||    
T  17916991 taggggtgttcgcggtgcgatttggttcagttttgagcataaaagttatccaaactttgagataaaaaaacatgcggtttggtttggttcggttgatttt 17916892  T
Q  124 taaaaagtcatccaaaccaa 143  Q
    ||||||||||||||||||||    
T  17916891 taaaaagtcatccaaaccaa 17916872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 36413781 - 36413602
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || ||||    
T  36413781 ctaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgattt 36413682  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  36413681 ttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 36413602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 42785772 - 42785644
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    ||||||||||||| || ||||||||||||||  |||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||  || ||    
T  42785772 aactaggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaatcgtgagataaaaaaggatgcggtttggtttggttcgcttgat 42785673  T
Q  121 ttttaaaaagtcatccaaaccaaaccaaa 149  Q
    ||||||||| |||| ||||||||||||||    
T  42785672 ttttaaaaactcattcaaaccaaaccaaa 42785644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 44035251 - 44035426
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagat-taaaaagcatgcggtttggtttggttcaattaattttta 125  Q
    ||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||  | ||  ||||||||||||||||||||||||||  || |||||||    
T  44035251 gggtgttcgcagggcggtttggttcggttttgagcataaaagtcatccaaaccgcaaaataaaaaaagcatgcggtttggtttggttcggttgattttta 44035350  T
Q  126 aaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||| || |||||||||| |  ||  ||| ||| |||| ||| ||||||||| |||||||    
T  44035351 aaaagtcatccaaaccaaacc-aaccaaaccaatggggttttgattggttcggtttgtgtggtttatcgcgagataa 44035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 9811333 - 9811457
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||| ||||||||||||||||||||  || |||||    
T  9811333 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 9811432  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  9811433 taaaaagtcatccaaaccaaaccaa 9811457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 11375867 - 11375968
Alignment:
Q  47 ggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaacc 146  Q
    ||||| ||||| ||||||||||| |||||||||| ||||| ||||| ||||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  11375867 ggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaaacatgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaacc 11375966  T
Q  147 aa 148  Q
    ||    
T  11375967 aa 11375968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 18356846 - 18356970
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||| |||| || ||||| |||||||| ||||||||||||||||| ||| |||| | ||||| || ||||||||||| ||| ||||||  |||||||||    
T  18356846 tagggatgttcgcggtgcgatttggttcggttttgagcataaaagtcatctaaactgcgagataaagaagcatgcggtatggattggtttgattaatttt 18356945  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||| |||||||||||||    
T  18356946 taaaaagtcattcaaaccaaaccaa 18356970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 25298388 - 25298270
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    ||||||| || |||| ||||||||| ||||||||||||||||| ||| |||| | ||||| ||||| ||| ||||| ||||||||||  || ||||||||    
T  25298388 gggtgttcgcggtgcagtttggttcggttttgagcataaaagtcatcgaaactgcgagataaaaaaacattcggttcggtttggttcggttgatttttaa 25298289  T
Q  127 aaagtcatccaaaccaaac 145  Q
    |||||||||||||||||||    
T  25298288 aaagtcatccaaaccaaac 25298270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 15320720 - 15320598
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || ||||||||||||||  |||||||  ||||||| |||||||||||||  | ||||||||||| ||| ||||||||||| || ||||    
T  15320720 ctaggggtgttcgcggtgcggtttggttcgattttgaggctaaaagtcatccaaaccgtgaagtaaaaaagcatgcagttaggtttggttcagttgattt 15320621  T
Q  123 ttaaaaagtcatccaaaccaaac 145  Q
    ||||||    |||||||||||||    
T  15320620 ttaaaataaaatccaaaccaaac 15320598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 18357154 - 18357219
Alignment:
Q  220 atattgttctaccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    |||||||| | |||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  18357154 atattgttttgccttaatatagtcatgtattacctgtgtcataaaccgacagaacataccaccaaa 18357219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 42785449 - 42785384
Alignment:
Q  220 atattgttctaccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    |||||||| | | |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  42785449 atattgttatgcgttaatatagtcatgtattacatgtgtcataaagtggcataacataccaccaaa 42785384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 12041729 - 12041640
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||||||||| ||| |||||||||| ||||||||  ||||||| |||  |||||| |||| ||||| ||||||||||| ||||||||    
T  12041729 taggggtgtttgcggtgtggtttggttcggttttgaggctaaaagtcatctgaaccgtaagataaaaaaacatgcggtttgatttggttc 12041640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 34910254 - 34910321
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaa 92  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | || ||||||| ||||| |||||    
T  34910254 aggggtgtttgcggtgcagtttggttcagttttgagcataaaaatcattcaaaccgcgagataaaaaa 34910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 17762684 - 17762773
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || ||| ||||| |||  ||||||||  ||||||| | || ||||| ||||| ||||| ||||||||||||||||||||    
T  17762684 taggggtgttcgcggtgtggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaacatgcggtttggtttggttc 17762773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 5862776 - 5862636
Alignment:
Q  19 ctaactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaatta 118  Q
    |||| |||||||||| || |||||||||| ||   |||||||  ||||||| ||| ||| ||  | || |||||| |||||||||||||||||||  ||     
T  5862776 ctaattaggggtgttcgcggtgcggtttgatttgattttgagggtaaaagtcatctaaatcgcaaaataaaaaagtatgcggtttggtttggttcggttg 5862677  T
Q  119 atttttaaaaagtcatccaaaccaaaccaaaacaaaccaat 159  Q
    | ||||||||    |||| |||||||||||| |||||||||    
T  5862676 acttttaaaataaaatccgaaccaaaccaaatcaaaccaat 5862636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 28790462 - 28790573
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    ||||||||||||||||||||||   ||||||| |||  |||||  |||| ||||||||||||||||| || | |||  || | ||||||||    |||||    
T  28790462 gtgcggtttggttcagttttgatgttaaaagtcatctgaaccgcaagataaaaaagcatgcggtttgattagattcggttgacttttaaaataaaatcca 28790561  T
Q  138 aaccaaaccaaa 149  Q
    ||||||||||||    
T  28790562 aaccaaaccaaa 28790573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 44085446 - 44085521
Alignment:
Q  39 tgcggtttggttcagttttgagcataaaagttatccaaaccgtgagat-taaaaagcatgcggtttggtttggttc 113  Q
    ||||||||||||||||||||||  | ||||| |||  |||||  ||||  ||||||||||||||||||||||||||    
T  44085446 tgcggtttggttcagttttgagggttaaagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttc 44085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 12841488 - 12841581
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaatt 117  Q
    ||||||||||||| |||| |||| |||| ||||||||  ||||| | ||   || ||| |||| |||| |||||||||||||||||||| ||||    
T  12841488 taggggtgtttgcggtgcagttttgttcggttttgagattaaaaatcatatgaatcgtaagataaaaatgcatgcggtttggtttggttgaatt 12841581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 27301624 - 27301539
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttg 109  Q
    |||||||||| ||  ||| ||||||||| ||||||||  ||||||  ||||  ||||  |||| ||||||||||||||||||||||    
T  27301624 taggggtgttcgcgctgcagtttggttcggttttgagattaaaagccatccggaccgcaagataaaaaagcatgcggtttggtttg 27301539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 41461024 - 41461113
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || |||| ||||||||| ||||| ||  ||||||| | || |||||  || | |||||| |||||||||||||||||||    
T  41461024 taggggtgttcgcggtgcagtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagtatgcggtttggtttggttc 41461113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 12884473 - 12884561
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    ||||| ||||||| ||||||||||||||  |||| ||  ||||||| |||||||| |   | | |||||| ||||||||||||||||||    
T  12884473 tagggatgtttgcggtgcggtttggttcgattttaaggttaaaagtcatccaaactgcatggtaaaaaagtatgcggtttggtttggtt 12884561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 10661096 - 10661220
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||  || |||||    
T  10661096 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 10661195  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  10661196 taaaaagtcatccaaaccaaaccaa 10661220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 14549169 - 14549344
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    ||||||| || ||| |||||| ||| ||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||| |||  || ||||||||    
T  14549169 gggtgttcgcggtgtggtttgattcggttttgagcataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttgattcggttgatttttaa 14549268  T
Q  127 aaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||| |||||||||| |  ||| ||| ||| |||| ||||||||||||| |||||||    
T  14549269 aaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataa 14549344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 33068206 - 33068333
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    |||||||||||| |  |||||||||||||| ||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||| || |||    
T  33068206 actaggggtgttcgtggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttggttcagttgatt 33068305  T
Q  122 tttaaaaagtcatccaaaccaaaccaaa 149  Q
    ||||||||||||||||||||||| ||||    
T  33068306 tttaaaaagtcatccaaaccaaatcaaa 33068333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 44672734 - 44672855
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaa 126  Q
    |||||||||| |||| ||||||||| ||||||||||||||||| ||||||| || ||||| ||||| |||||||||||||||||||| ||| ||||||||    
T  44672734 gggtgtttgcggtgcagtttggttcggttttgagcataaaagtcatccaaatcgcgagataaaaaaacatgcggtttggtttggttcgattgatttttaa 44672833  T
Q  127 aaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||||||||    
T  44672834 aaagtcatccaaaccaaaccaa 44672855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 5803388 - 5803208
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    |||||||||||| |||||||||||||||||  |||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||    
T  5803388 actaggggtgttcgcagtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatt 5803289  T
Q  122 tttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  5803288 tttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 5803208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 36910475 - 36910347
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaa 119  Q
    |||||||||||||| || |||||||||||||   |||||||||||||||| ||| |||||| ||||| |||||||||||||||| |||||||||  || |    
T  36910475 taactaggggtgttcgcggtgcggtttggtttgattttgagcataaaagtcatcaaaaccgcgagataaaaaagcatgcggtttagtttggttcggttga 36910376  T
Q  120 tttttaaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||||||    
T  36910375 tttttaaaaagtcatccaaaccaaaccaa 36910347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 3006708 - 3006534
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaa 127  Q
    |||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||||||    
T  3006708 ggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaa 3006609  T
Q  128 aagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  3006608 aagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 3006534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 30392083 - 30392169
Alignment:
Q  26 ggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    ||||||||||| |||||||  ||||| ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  30392083 ggggtgtttgcggtgcggtgcggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtt 30392169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 6200989 - 6200856
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaa 127  Q
    |||||| || || ||| ||||||| ||||||||||||||||| |||||||| | ||||| ||||| |||||||||| |||||||| | || |||||||||    
T  6200989 ggtgttcgcggtacggcttggttcggttttgagcataaaagtaatccaaactgcgagataaaaaaacatgcggtttagtttggttaagttgatttttaaa 6200890  T
Q  128 aagtcatcc-aaaccaaaccaaaacaaaccaatg 160  Q
    ||||||||| ||| ||||||||| |||| |||||    
T  6200889 aagtcatccaaaatcaaaccaaaccaaagcaatg 6200856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 18633728 - 18633559
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||  |||||||||||||| ||||||| ||||||||| ||| |||||| ||||| ||||||| |||||||||||| |||| | ||     |    
T  18633728 taggggtgtttgaggtgcggtttggttcggttttgaacataaaagtcatctaaaccgcgagataaaaaagcgtgcggtttggttcggttgagtt-----t 18633634  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||| |||||||||||||||    ||||| |  ||| ||| ||| |||| ||||||||||||| |||||||    
T  18633633 taaaaagtcatcaaaaccaaaccaaaac----caatgcggtttggattggttcggtttgtgcggtttatcgcgagataa 18633559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 18170160 - 18169992
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||  |||||||||||||| ||||||| ||||||||| ||| |||||| ||||| ||||||| |||||||||||| |||| | ||     |    
T  18170160 taggggtgtttgaggtgcggtttggttcggttttgaacataaaagtcatctaaaccgcgagataaaaaagcgtgcggtttggttcggttgagtt-----t 18170066  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||| |||||||||||||     |||||| |  ||| ||| ||| |||| ||||||||||||| |||||||    
T  18170065 taaaaagtcatcaaaaccaaaccaaa-----ccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataa 18169992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 3681876 - 3681994
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||| |||| |||||| |||||||||||||||||     || | |||    
T  3681876 taggggtgttcgtattgcggtttggttcggttttgaatataaaagttatccaaaccgcgaga-taaaaaacatgcggtttggtttgg-----ttgacttt 3681969  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||| |||||||    
T  3681970 taaaaagtcatccaaactaaaccaa 3681994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 44336714 - 44336853
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagat-taaaaagcatgcggtttggtttggttcaattaattt 122  Q
    |||| ||||| || |||||||||||||| ||||||||  ||||||| |||| |||||  ||||  ||||| ||||||||||||||||||||  || | ||    
T  44336714 taggagtgttcgcggtgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgactt 44336813  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtg 162  Q
    ||||||    |||| |||||||||||| |||||| |||||    
T  44336814 ttaaaatacaatccgaaccaaaccaaaccaaacctatgtg 44336853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 40436378 - 40436468
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagat-taaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || |||||||||||||| ||||||||  ||||||| |||||||  |  ||||  ||||| ||||| ||||||||||||||    
T  40436378 taggggtgttcgcggtgcggtttggttcggttttgagggtaaaagtgatccaaattgcaagataaaaaaaacatgccgtttggtttggttc 40436468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 12883870 - 12883781
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||||||||| || |||||||||||||| ||||||||  ||||||| || | ||||   | || || ||| |||||||||||||||||||    
T  12883870 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagtcattcgaaccacaaaataaataagtatgcggtttggtttggttc 12883781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 15272446 - 15272358
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    ||||||| || || |||||||||||| | ||||||||  ||||||| |||| ||| |   ||| |||||||| ||||||||||||||||    
T  15272446 taggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtt 15272358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 15452815 - 15452727
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    ||||||| || || |||||||||||| | ||||||||  ||||||| |||| ||| |   ||| |||||||| ||||||||||||||||    
T  15452815 taggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtt 15452727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 6e-43; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 6004531 - 6004403
Alignment:
Q  20 taactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaa 119  Q
    |||||||||||||||||  ||||||||||||| ||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||  || |    
T  6004531 taactaggggtgtttgcgatgcggtttggttcggttttcagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttga 6004432  T
Q  120 tttttaaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||||||    
T  6004431 tttttaaaaagtcatccaaaccaaaccaa 6004403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 4669787 - 4669609
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||| |||||||| |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  4669787 taggagtgtttgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 4669688  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||| |||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  4669687 taaaaagtcatccgaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 4669609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 21586969 - 21586859
Alignment:
Q  38 gtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatcca 137  Q
    |||| ||||||||| ||||||||| ||||||| |||||||||| ||||| ||||||||||| |||||||||| |||| || |||||||||||||||||||    
T  21586969 gtgcagtttggttcggttttgagcttaaaagtcatccaaaccgcgagataaaaaagcatgcagtttggtttgattcagttgatttttaaaaagtcatcca 21586870  T
Q  138 aaccaaaccaa 148  Q
    |||||||||||    
T  21586869 aaccaaaccaa 21586859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 202
Target Start/End: Original strand, 10369151 - 10369332
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    ||||||||||||| || |||||||||||||| ||||  ||||||| | | |||||||| | ||||  ||||| |||||||||||||| |||||  || ||    
T  10369151 aactaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaactgcgagagaaaaaaacatgcggtttggttcggttcgtttgat 10369250  T
Q  121 ttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  10369251 ttttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 10369332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 32880243 - 32880367
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||| |||||||| |||||||||||||| | |||||||||||||||  ||||||||| ||||| |||||||||| |||||| ||||||||  || |||||    
T  32880243 taggagtgtttgcggtgcggtttggttcggctttgagcataaaagtcctccaaaccgcgagataaaaaagcatgtggtttgatttggttcggttgatttt 32880342  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||| |||||||||||||    
T  32880343 taaaaagtcatacaaaccaaaccaa 32880367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 34794536 - 34794661
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  |||||||||||| |||||||||||||  || ||||    
T  34794536 ctaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgattt 34794635  T
Q  123 ttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||||||||||||    
T  34794636 ttaaaaagtcatccaaaccaaaccaa 34794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 51149797 - 51149673
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  51149797 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 51149698  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||| ||||||||||||||||    
T  51149697 taaaaagtgatccaaaccaaaccaa 51149673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 43030359 - 43030493
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||| || |||||||||||||||||| || | || ||  |||| |||||| |||| ||||||||||||||  || |||||    
T  43030359 taggggtgttcgcggtgcggtttgatttagttttgagcataaaagtcatgcgaatcgcaagataaaaaagtatgcagtttggtttggttcggttgatttt 43030458  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaa 158  Q
    ||||||||||||||||| |||||||| ||||||||    
T  43030459 taaaaagtcatccaaactaaaccaaaccaaaccaa 43030493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 35402345 - 35402220
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | ||||||| || ||||  ||||| ||||||||||||||||||||  || |||||    
T  35402345 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaatcgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 35402246  T
Q  124 taaaaagtcatccaaaccaaaccaaa 149  Q
    ||||||||||||||||||||||||||    
T  35402245 taaaaagtcatccaaaccaaaccaaa 35402220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 9827918 - 9827794
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||| ||||||| ||||| ||||||||||| |||||||||  ||||| |  |||||||||  ||| |||||||   || |||||    
T  9827918 taggggtgttcgcggtgcggcttggttcggttttaagcataaaagtcatccaaaccacgagataattaagcatgcgacttgatttggttaggttgatttt 9827819  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  9827818 taaaaagtcatccaaaccaaaccaa 9827794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 50562713 - 50562586
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaat 120  Q
    ||||||||||| | || ||||||||||||||  |||| ||||||||||| ||| ||||   ||||| |||||||||| |||||||||||||||  || ||    
T  50562713 aactaggggtgatcgcggtgcggtttggttcgattttaagcataaaagtcatctaaactacgagataaaaaagcatgtggtttggtttggttcggttgat 50562614  T
Q  121 ttttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||| |||||| || ||||||||    
T  50562613 ttttaaaaattcatcccaatcaaaccaa 50562586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 33360968 - 33361074
Alignment:
Q  96 tgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgt 195  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| ||||     
T  33360968 tgcggtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgc 33361067  T
Q  196 gagataa 202  Q
    |||||||    
T  33361068 gagataa 33361074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 35532277 - 35532193
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtt 107  Q
    |||||||| || ||||||| ||||||||| ||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||    
T  35532277 ctaggggtattagcagtgcagtttggttcggttttgagcataaaagtcatccaaattgcgagataaaaaagcatgcggtttggtt 35532193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 48032965 - 48032865
Alignment:
Q  43 gtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaacca 142  Q
    |||||||||||||||||||||||||     ||||||   ||||| |||||||||||||||||||| |||||  || ||||||||||| ||||||||||||    
T  48032965 gtttggttcagttttgagcataaaac----ccaaactacgagataaaaaagcatgcggtttggtt-ggttcggttgatttttaaaaattcatccaaacca 48032871  T
Q  143 aaccaa 148  Q
    ||||||    
T  48032870 aaccaa 48032865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 17144865 - 17144732
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaa 127  Q
    |||||| ||||||||||||||||| ||||||||  ||||||| ||||||||||  ||| ||||||| |||||| ||||||||||||  || | |||||||    
T  17144865 ggtgttcgcagtgcggtttggttcggttttgaggctaaaagtcatccaaaccgcaaga-taaaaagtatgcggattggtttggttcggttgacttttaaa 17144767  T
Q  128 aagtcatccaaaccaaaccaaaacaaaccaatgtg 162  Q
    |    |||| || ||||||||  ||||||||||||    
T  17144766 atagaatccgaagcaaaccaagccaaaccaatgtg 17144732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 39097906 - 39098010
Alignment:
Q  42 ggtttggttcagttttgagcataaaagttatccaaaccg--tgagat-taaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaa 138  Q
    ||||||||||  |||||||||||||||| |||||||| |  || ||  |||||| ||||||||||| ||||||||| || |||||||||||||| |||||    
T  39097906 ggtttggttcgattttgagcataaaagtcatccaaactgcatgcgagataaaaaacatgcggtttgatttggttcagttgatttttaaaaagtcgtccaa 39098005  T
Q  139 accaa 143  Q
    |||||    
T  39098006 accaa 39098010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 54121967 - 54122099
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaa 127  Q
    ||||||||| |||| ||||| |||  |||||||  ||||||| |||| |||||| |||| |||||| |||||||||||||||||||  || | |||||||    
T  54121967 ggtgtttgcggtgcagtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggtttggttcggttgacttttaaa 54122066  T
Q  128 aagtcatccaaaccaaaccaaaacaaaccaatg 160  Q
    |    |||| |||||||||||| |||| |||||    
T  54122067 ataaaatccgaaccaaaccaaaccaaaacaatg 54122099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 55467785 - 55467693
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||| |||||||| |||||||||||||| ||||||||  ||||||| |||| ||| |  |||| || ||| |||||||||||||||||||    
T  55467785 aactaggtgtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttc 55467693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 42363362 - 42363276
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| ||   |||||  |||| ||||| ||||||||||||||||||||    
T  42363362 gggtgttcgcagtgcggtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaatcatgcggtttggtttggttc 42363276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 37044863 - 37044943
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttg 104  Q
    ||||||||||| | |||||||||||||| ||||||||   |||||| ||||||||||  |||| ||||| |||||||||||    
T  37044863 taggggtgtttacggtgcggtttggttcggttttgagagaaaaagtcatccaaaccgcaagataaaaaaacatgcggtttg 37044943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 2832539 - 2832451
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    ||||| |||| || ||| |||||||||  ||||||||  ||||||| |||| ||||   |||| |||||||||||||||||||||||||    
T  2832539 tagggttgttcgcggtgtggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaagcatgcggtttggtttggtt 2832451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 20038327 - 20038421
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaatta 118  Q
    ||||||||||| |  ||| ||||||||||||||| ||  ||||||| |||  |||||| |||| |  ||||||| ||||||||||||||| ||||    
T  20038327 taggggtgtttacgatgcagtttggttcagttttaaggttaaaagtcatctgaaccgtaagataaggaagcatgtggtttggtttggttcgatta 20038421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 26292096 - 26291960
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || ||||||||||||||  |||| |   ||||| | ||||||||||  |||| |||||   ||||||||| ||||||||  || |||||    
T  26292096 taggggtgttcgcggtgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattgtgcggtttgctttggttcggttgatttt 26291997  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatg 160  Q
    |||||    |||  |||||||||||| ||||||||||    
T  26291996 taaaatagaatctgaaccaaaccaaatcaaaccaatg 26291960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 15068402 - 15068581
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||||||||||||| ||||| ||||||| | | |||||||||| ||||  |||||||||||| |||||||||||||  || ||||    
T  15068402 ctaggggtgttcgcggtgcggtttggttcggttttaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgattt 15068501  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  15068502 ttaaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 15068581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 11917348 - 11917526
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  11917348 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 11917447  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  11917448 taaaaagtcatccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 11917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 17085375 - 17085209
Alignment:
Q  26 ggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttta 125  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||| ||| |||||||||  || |||||||    
T  17085375 ggggtgtttgcggtgcggtttggttcagttttgagcataaaagtcatccaaaccacgagataaaaaagcatgcgatttagtttggttcggttgattttta 17085276  T
Q  126 aaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||          || || |||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  17085275 aaaagtcat----------cccaatcaaaccaatgtggcttggattcgttcggttggtgcgatttatcgtgagataa 17085209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 36177216 - 36177075
Alignment:
Q  53 gttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaaaaca 152  Q
    |||| |||||||||||| |||||||||| ||||| |||| |||||||||||||||||||||  || |||||||||||||||||||||| |||||||| ||    
T  36177216 gtttggagcataaaagtcatccaaaccgcgagataaaaatgcatgcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaaccaaacca 36177117  T
Q  153 aaccaatgtgacttgcattcgtttggttggtgcggtttatcg 194  Q
    |||||||| | |||| ||| ||| |||| |||||||||||||    
T  36177116 aaccaatgcggcttggattggttgggtttgtgcggtttatcg 36177075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 333413 - 333293
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaa 127  Q
    ||||||||| ||||||||||||||  |||||||||||||||| |||||||||| |||||  |||||||||||  |||||||||||| ||| |||||||||    
T  333413 ggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagatagaaaagcatgcgaattggtttggttcgattgatttttaaa 333314  T
Q  128 aagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||    
T  333313 aagtcatccaaaccaaaccaa 333293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 8408931 - 8409111
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    |||||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  |||||| |||||||||||||||||||  || |||    
T  8408931 actaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatt 8409030  T
Q  122 tttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||| ||||||||||||||| |||||||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  8409031 tttaaaaagtcacccaaaccaaaccaaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 8409111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 27886556 - 27886432
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  27886556 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 27886457  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  27886456 taaaaagtcatccaaaccaaaccaa 27886432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 38433638 - 38433813
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    ||||||||||||  | |||| |||| |||| ||||||||||||||||| || ||||||| ||||| ||||| |||||||||| |||||||||  || |||    
T  38433638 actaggggtgttcacggtgcagtttagttcggttttgagcataaaagtcattcaaaccgcgagataaaaaatcatgcggtttagtttggttcggttgatt 38433737  T
Q  122 tttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||| ||||||||||||     |||||||||| | |||| ||| ||| |||| ||||||||||||| |||||||    
T  38433738 tttaaaaagtcctccaaaccaaac-----caaaccaatgcggcttggattggttcggtttgtgcggtttatcgcgagataa 38433813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 36103755 - 36103626
Alignment:
Q  21 aactaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagc-atgcggtttggtttggttcaattaa 119  Q
    ||||| ||||||| || |||||||||||||| |||||||||||||||   |||||||  ||||||| |||||   |||||||||||||||||||| || |    
T  36103755 aactaagggtgttcgcggtgcggtttggttcggttttgagcataaaatacatccaaagtgtgagataaaaaaaatatgcggtttggtttggttcagttga 36103656  T
Q  120 tttttaaaaagtcatccaaaccaaaccaaa 149  Q
    ||||||||||||||||||||||||||||||    
T  36103655 tttttaaaaagtcatccaaaccaaaccaaa 36103626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 42544600 - 42544725
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    |||||| |||| || ||| |||||| ||| |||||||||| |||||| ||| |||||| ||||| ||||||||||||||||||||||||||  || ||||    
T  42544600 ctagggttgttcgcggtgtggtttgcttcggttttgagcaaaaaagtcatctaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgattt 42544699  T
Q  123 ttaaaaagtcatccaaaccaaaccaa 148  Q
    |||| |||||||||||||||||||||    
T  42544700 ttaagaagtcatccaaaccaaaccaa 42544725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 701162 - 701341
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaatt-aattt 122  Q
    ||||||||||||| |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||| |||| |||||||||||||||  || | |||    
T  701162 taggggtgtttgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgtggtttggtttggttcggttgatttt 701261  T
Q  123 ttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    ||||||||||||||||||||||||||| |||| ||||| |  ||| ||| |||  |||| ||||||| |||| |||||||    
T  701262 ttaaaaagtcatccaaaccaaaccaaaccaaatcaatgcggtttggattggttcagttgatgcggttaatcgcgagataa 701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 30001952 - 30002078
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatt 121  Q
    ||||||| |||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  ||  ||    
T  30001952 actagggttgttcgcggtgcggtttggttcggtttcaagcataataataatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgttt 30002051  T
Q  122 tttaaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||||    
T  30002052 tttaaaaagtcatccaaaccaaaccaa 30002078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 17085095 - 17085006
Alignment:
Q  201 aacttttattttcaatatc-----atattgttctaccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 285  Q
    ||||||||||||||||| |     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17085095 aacttttattttcaataccataatatattgttctgccttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaaa 17085006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 30265930 - 30265807
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttt 124  Q
    ||||||||| || |||||||||||||  ||||||||||||||| | ||| ||||||  |||| ||||| ||||| ||||||||||||||  || ||||||    
T  30265930 aggggtgttcgcggtgcggtttggtttggttttgagcataaaaatcatctaaaccgcaagataaaaaaacatgcagtttggtttggttcggttgattttt 30265831  T
Q  125 aaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||| ||||||||||||    
T  30265830 aaaaagtcatcaaaaccaaaccaa 30265807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 667755 - 667630
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || |||||||||||||| ||||  ||||||| | | |||||||||| ||||   |||| ||| ||||||||||||||||  || ||||    
T  667755 ctaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagagaaaaacatacggtttggtttggttcggttgattt 667656  T
Q  123 ttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||||||||||||    
T  667655 ttaaaaagtcatccaaaccaaaccaa 667630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 12166273 - 12166180
Alignment:
Q  55 tttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||| ||| ||| || ||||| ||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||||    
T  12166273 tttgagcataaaagtcatcaaaatcgcgagataaaaaagcatgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 12166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 2227006 - 2226900
Alignment:
Q  42 ggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaacc 141  Q
    |||||||||| |||||||||||||||   |||||||||| ||||| |||||| | | |||||||||||||||  || ||||||||||| |||||||||||    
T  2227006 ggtttggttcggttttgagcataaaaaacatccaaaccgcgagataaaaaagaacgtggtttggtttggttcggttgatttttaaaaactcatccaaacc 2226907  T
Q  142 aaaccaa 148  Q
    |||||||    
T  2226906 aaaccaa 2226900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 12681205 - 12681085
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattt 122  Q
    ||||||||||| || ||||||||| |||| ||||||||||||||||| || || |||| ||||| |||||||||| ||||||||| |||| |     |||    
T  12681205 ctaggggtgttcgcggtgcggtttagttcggttttgagcataaaagtcattcagaccgcgagataaaaaagcatgtggtttggttcggttga-----ttt 12681111  T
Q  123 ttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||| ||||||||||||||||||    
T  12681110 ttaaaaattcatccaaaccaaaccaa 12681085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 27572185 - 27572049
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||||| |||||||||||||| ||||||||  ||||||| |||| |||||  || | ||||||||||||||||||||||||||  ||   |||    
T  27572185 taggggtgtttgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttt 27572086  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatg 160  Q
    |||||    |||| |||||||||||| ||||||||||    
T  27572085 taaaataaaatccgaaccaaaccaaaccaaaccaatg 27572049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 9160927 - 9161051
Alignment:
Q  28 ggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtt-----tggtttggttcaattaattt 122  Q
    |||||| || |||||||||||||| |||||||| | |||||| || ||||||| ||||| |||||||||||||||     |||||||||||  || ||||    
T  9160927 ggtgttcgcggtgcggtttggttcggttttgagaa-aaaagtcattcaaaccgcgagat-aaaaagcatgcggtttggtttggtttggttcggttgattt 9161024  T
Q  123 ttaaaaagtcatccaaaccaaaccaaa 149  Q
    |||||||||||||||||||||||||||    
T  9161025 ttaaaaagtcatccaaaccaaaccaaa 9161051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 9988995 - 9988823
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    ||||||||||  ||||||||| || ||| ||||||| ||||||||| |||||||||  ||||| ||||| |||| |||||| || |||| |     ||||    
T  9988995 taggggtgttcacagtgcggtatgattcggttttgaacataaaagtcatccaaaccacgagataaaaaaacatgtggtttgattcggttga-----tttt 9988901  T
Q  124 taaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggtttatcgtgagataa 202  Q
    |||||||||||||||| |||||||||  ||||||||| | |||  ||| ||| || ||||||||||||||| |||||||    
T  9988900 taaaaagtcatccaaatcaaaccaaacaaaaccaatgcggcttagattggttcgg-tggtgcggtttatcgcgagataa 9988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 35359212 - 35359263
Alignment:
Q  233 ttaatatagtcatgtattacatgtgtcataaactggcagaacataccaccaa 284  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  35359212 ttaatatagtcatgtattacttgtgttataaactggcagaacataccaccaa 35359263  T

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Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 35358947 - 35359052
Alignment:
Q  92 agcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaaaacaaaccaatgtgacttgcattcgtttggttggtgcggttta 191  Q
    ||||||||||||||||||||||  || || ||||||||||||||||||||||||||||     |||||  | |||| ||| ||| ||||| |||||||||    
T  35358947 agcatgcggtttggtttggttcggttgatatttaaaaagtcatccaaaccaaaccaaa-----ccaatacggcttggattagttcggttgatgcggttta 35359041  T
Q  192 tcgtgagataa 202  Q
    ||| |||||||    
T  35359042 tcgcgagataa 35359052  T

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Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 23780770 - 23780839
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcat 96  Q
    ||||||| || |||||||||||||| ||||| ||||||||||| |||||||||| ||||| |||||||||    
T  23780770 gggtgttcgcggtgcggtttggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaagcat 23780839  T

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Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 23867723 - 23867792
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcat 96  Q
    ||||||| || |||||||||||||| ||||| ||||||||||| |||||||||| ||||| |||||||||    
T  23867723 gggtgttcgcggtgcggtttggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaagcat 23867792  T

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Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 35240961 - 35240875
Alignment:
Q  27 gggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttc 113  Q
    |||| ||||||||||||||||||||  |||||||  ||||| | |||| |||||| || | |||||| |||||||||| ||||||||    
T  35240961 gggtatttgcagtgcggtttggttcgattttgaggctaaaattcatccgaaccgtaagctgaaaaagtatgcggtttgatttggttc 35240875  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 10174096 - 10174152
Alignment:
Q  92 agcatgcggtttggtttggttcaattaatttttaaaaagtcatccaaaccaaaccaa 148  Q
    ||||||||||||||||| |||   || ||||||||||||| ||||||||||||||||    
T  10174096 agcatgcggtttggtttcgtttggttgatttttaaaaagttatccaaaccaaaccaa 10174152  T

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Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 34881464 - 34881360
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||| | || |||| ||||  ||||||||||||  ||||||| |||||||||  ||||| ||||||||  ||||||||||| ||||| || | |||    
T  34881464 taggggtgctcgcggtgcagtttaattcagttttgaggctaaaagtcatccaaaccacgagataaaaaagcaaacggtttggtttagttcagttgacttt 34881365  T
Q  124 taaaa 128  Q
    |||||    
T  34881364 taaaa 34881360  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 36567664 - 36567752
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    |||||||||| || |||| ||||| ||  ||||||||  |||||||||||| |||||| |||| || ||| ||||||||||||| ||||    
T  36567664 taggggtgttcgcggtgccgtttgatttggttttgaggttaaaagttatccgaaccgtaagatgaataagtatgcggtttggttcggtt 36567752  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 7487430 - 7487377
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaa 76  Q
    ||||| |||||||| ||| | ||||||||||||||||| |||||||| ||||||    
T  7487430 ctaggagtgtttgcggtgtgatttggttcagttttgagtataaaagtcatccaa 7487377  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 27111195 - 27111158
Alignment:
Q  23 ctaggggtgtttgcagtgcggtttggttcagttttgag 60  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  27111195 ctaggggtgtttgcggtgcggtttggatcagttttgag 27111158  T

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Target: scaffold0308 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 6023 - 5899
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaatttt 123  Q
    |||||||||| || ||||||||||||||  |||  ||||||| | | |||||||||| ||||  ||||||||||||||||||||||||||  || |||||    
T  6023 taggggtgttcgcggtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 5924  T
Q  124 taaaaagtcatccaaaccaaaccaa 148  Q
    |||||||||||||||||||||||||    
T  5923 taaaaagtcatccaaaccaaaccaa 5899  T

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Target: scaffold0029 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 40727 - 40637
Alignment:
Q  22 actaggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggtt 112  Q
    |||||||||||| || |||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||  |||||||||||||||||||    
T  40727 actaggggtgttcgcggtgcggtttggttcggttttgagcataatagtcatccaaaccgtgagataaaaactcatgcggtttggtttggtt 40637  T

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Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 40620 - 40590
Alignment:
Q  119 atttttaaaaagtcatccaaaccaaaccaaa 149  Q
    |||||||||||||||||||||||||||||||    
T  40620 atttttaaaaagtcatccaaaccaaaccaaa 40590  T

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Target: scaffold0204 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 14465 - 14555
Alignment:
Q  24 taggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttca 114  Q
    |||| |||||||| ||||||||||||||||||||||   ||||||| |||| |||||  |||| |||||||||||| ||||||||||||||    
T  14465 taggagtgtttgcggtgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagataaaaaagcatgcgatttggtttggttca 14555  T

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Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 25807 - 25930
Alignment:
Q  25 aggggtgtttgcagtgcggtttggttcagttttgagcataaaagttatccaaaccgtgagattaaaaagcatgcggtttggtttggttcaattaattttt 124  Q
    |||||| ||||| |||| ||||||||| ||||| ||  ||||||| |||| |||||| |||| ||||| ||||| ||||||||||||||  || | ||||    
T  25807 aggggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa-catgcagtttggtttggttcggttgactttt 25905  T
Q  125 aaaaagtcatccaaaccaaaccaaa 149  Q
    ||||    |||||||||||||||||    
T  25906 aaaataaaatccaaaccaaaccaaa 25930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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