View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8980_high_21 (Length: 278)
Name: NF8980_high_21
Description: NF8980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8980_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 7752616 - 7752451
Alignment:
| Q |
19 |
actaactgcaagcatggtcacacggccatttgaattgcattctatgcctgaccaatttttacagcagtcagtgataggatcccaggttgtgaagactgag |
118 |
Q |
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| T |
7752616 |
actaactgcaagcatggtcacacggccatttgaattgcattctatgcctgaccaatttttacagcagtcagtgataggatcccatgttgtgaagactgag |
7752517 |
T |
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| Q |
119 |
gcattgttgaattgagatttaatcccaagtaggacatttttgtcatttgtgttgcatatagtggtg |
184 |
Q |
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| T |
7752516 |
gcattgttgaattgagatttaatcccaagtaggacatttttgtcatttgtgttgcatatagtggtg |
7752451 |
T |
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