View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8980_low_58 (Length: 258)
Name: NF8980_low_58
Description: NF8980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8980_low_58 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 51821846 - 51821602
Alignment:
| Q |
1 |
tctctgaatttctcagagaatgaactttccggtaaaataccagagagtttaggttcattgaagttgagtctctttgatctttcgcataaccgattatccg |
100 |
Q |
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| T |
51821846 |
tctctgaatttctcagagaatgaactttccggtaaaataccagagagtttaggttcattgaagttgagtctctttgatctttcgcataaccgattatccg |
51821747 |
T |
|
| Q |
101 |
gtgaaattccaataggtttgactattcaagcttacaatggaagcctcaccggaaacccgggtttatgcacgcttgatgctattggttccttcaagcgttg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51821746 |
gtgaaattccaataggtttgactattcaagcttacaatggaagcctcaccggaaacccgggtttatgcacgcttgatgctattggttccttcaagcgttg |
51821647 |
T |
|
| Q |
201 |
ttctgagaatagtggcttgtcaaaagatgtccgtgcccttgttct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51821646 |
ttctgagaatagtggcttgtcaaaagatgtccgtgcccttgttct |
51821602 |
T |
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