View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8981_high_72 (Length: 360)
Name: NF8981_high_72
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8981_high_72 |
 |  |
|
| [»] scaffold0007 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 40 - 353
Target Start/End: Original strand, 11334917 - 11335230
Alignment:
| Q |
40 |
agaacccaatcaaaccaaaccaaacaaaagaaccgatagagagaaacagccatacaaaagaaccaattgagaggagcaaccaaacataaaaatcaataag |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
11334917 |
agaacccaatcaaaccaaaccaaacaaaagaaccgatagagagaaacaaccatacaaaagaaccaatagagaggagcaaccaaacagaaaaatcaataag |
11335016 |
T |
 |
| Q |
140 |
gagaagtgcaattcaatcaatcataagaatccataagggagaagtgcaaaatcaatctaaagaatcaaaagggaagaagtgaaatcaatcagaagaatta |
239 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11335017 |
gagaagtgcaattcaatcaatcaaaagaatccataagggagaagtgcaaaatcaatctaaagaatcaaaagggaagaagtgaaatcaatctgaagaatta |
11335116 |
T |
 |
| Q |
240 |
aaagaggagaaatgcagggcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaaagca |
339 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11335117 |
aaagaggagaagtgcagggcaatcaatcagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaaagca |
11335216 |
T |
 |
| Q |
340 |
atcaatcaggagaa |
353 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
11335217 |
atcaatcaggagaa |
11335230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 353
Target Start/End: Original strand, 11335137 - 11335269
Alignment:
| Q |
222 |
aatcaatcagaagaattaaaag---aggagaaatgcagggcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatca |
318 |
Q |
| |
|
|||||||||||||||| | ||| ||||||| |||| ||||||||| |||||||||| |||| ||| |||||||| |||||||||||| ||||||| |
|
|
| T |
11335137 |
aatcaatcagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgag---aagtgcaaagcaatcaatcaggagaatca |
11335233 |
T |
 |
| Q |
319 |
a-aaggtgagaagtgcaaagcaatcaatcaggagaa |
353 |
Q |
| |
|
| ||| ||||||||||||||||||||| ||||||| |
|
|
| T |
11335234 |
ataagaggagaagtgcaaagcaatcaataaggagaa |
11335269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11320767 - 11320811
Alignment:
| Q |
1 |
tcaccatcaaccactcaaagagagaaccatctaaacataagaacc |
45 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11320767 |
tcaccatcaaccactcaaagagagaaccatctaaacataagaacc |
11320811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 277
Target Start/End: Original strand, 11335202 - 11335344
Alignment:
| Q |
140 |
gagaagtgcaattcaatcaatcataagaatccataag-ggagaagtgcaaa---atcaatctaaagaatcaaaagg-gaagaagtgaaatcaatcagaag |
234 |
Q |
| |
|
||||||||||| |||||||||| |||||| ||||| ||||||||||||| |||||| |||||||| ||| | ||||||||||||||||| ||| |
|
|
| T |
11335202 |
gagaagtgcaaagcaatcaatcaggagaatcaataagaggagaagtgcaaagcaatcaataaggagaatcaataggaggagaagtgaaatcaatcaaaag |
11335301 |
T |
 |
| Q |
235 |
aattaaaagaggagaaatgcagggcaatcaattagaagaatca |
277 |
Q |
| |
|
||| ||||| |||||| |||| ||||||||| |||||||||| |
|
|
| T |
11335302 |
aatgaaaaggggagaagtgcaatgcaatcaatcagaagaatca |
11335344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 9511952 - 9511886
Alignment:
| Q |
258 |
gcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcag-aagaatcaaaagg |
323 |
Q |
| |
|
||||||||| |||||||||| ||||||| |||||||||||||||||||| || ||||||||||||| |
|
|
| T |
9511952 |
gcaatcaatcagaagaatcaaaaggggatcagaagtgcaatgcaatcaattagaaagaatcaaaagg |
9511886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 353
Target Start/End: Original strand, 11335121 - 11335341
Alignment:
| Q |
138 |
aggagaagtgcaattcaatcaatcataagaatccataaggg----agaagtgcaa---aatcaatctaaagaatcaaaagggaagaagtgaaa-----tc |
225 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| ||||||| |||||||||| |||||||| ||||||||||||| ||||||| || || |
|
|
| T |
11335121 |
aggagaagtgcagggcaatcaatcagaagaatc-ataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaaagcaatc |
11335219 |
T |
 |
| Q |
226 |
aatcagaagaattaa-aagaggagaaatgcagggcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggt |
324 |
Q |
| |
|
|||||| ||||| || |||||||||| |||| ||||||||| || ||||||| ||| |||||||||| ||| |||||| |||||| |||||| |
|
|
| T |
11335220 |
aatcaggagaatcaataagaggagaagtgcaaagcaatcaataaggagaatcaatagg--aggagaagtgaaat-----caatcaaaagaatgaaaaggg |
11335312 |
T |
 |
| Q |
325 |
gagaagtgcaaagcaatcaatcaggagaa |
353 |
Q |
| |
|
||||||||||| |||||||||||| |||| |
|
|
| T |
11335313 |
gagaagtgcaatgcaatcaatcagaagaa |
11335341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 11335312 - 11335345
Alignment:
| Q |
286 |
ggagaagtgcaatgcaatcaatcagaagaatcaa |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11335312 |
ggagaagtgcaatgcaatcaatcagaagaatcaa |
11335345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 11335312 - 11335384
Alignment:
| Q |
139 |
ggagaagtgcaattcaatcaatcataagaatccata-agggagaagtgcaaaatcaatctaaagaatcaaaaggg |
212 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| ||| |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
11335312 |
ggagaagtgcaatgcaatcaatcagaagaatcaatagggggagaagtg--taatcaatcaaaagaatcaaaaggg |
11335384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 9511953 - 9511903
Alignment:
| Q |
298 |
tgcaatcaatcagaagaatcaaaagg---tgagaagtgcaaagcaatcaat |
345 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
9511953 |
tgcaatcaatcagaagaatcaaaaggggatcagaagtgcaatgcaatcaat |
9511903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 26403303 - 26403200
Alignment:
| Q |
3 |
accatcaaccactcaaagagagaaccatctaaacataagaacccaatcaaaccaaaccaaacaaaagaaccgatagagagaaacagccatacaaaagaac |
102 |
Q |
| |
|
||||||||||| | ||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||| | | ||||||| |||||||||||||||| |
|
|
| T |
26403303 |
accatcaaccagttaaatagagaaccatctaaacagaagaaccaagtcaaaccaaaccaaacaaaagaattggtggagagaagcagccatacaaaagaat |
26403204 |
T |
 |
| Q |
103 |
caat |
106 |
Q |
| |
|
|||| |
|
|
| T |
26403203 |
caat |
26403200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 44338748 - 44338660
Alignment:
| Q |
123 |
acataaaaatcaataaggagaagtgcaattcaatcaatcataagaatccataa-gggagaagtgcaaaatcaatctaaagaatcaaaaggg |
212 |
Q |
| |
|
||||||||| ||||| |||||||||||| | ||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
44338748 |
acataaaaaccaatagagagaagtgcaatgctctcaatcagaagaatccataaggggataagtgc--aatcaatcaaaagaatcaaaaggg |
44338660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 26403197 - 26403160
Alignment:
| Q |
286 |
ggagaagtgcaatgcaatcaatcagaagaatcaaaagg |
323 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26403197 |
ggagaagtgcaatgcaatcaatcaaaagaatcaaaagg |
26403160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 46963574 - 46963634
Alignment:
| Q |
269 |
gaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaag |
330 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| |||||| |
|
|
| T |
46963574 |
gaagaatcaaaagggg-ggagaagtgcaatgcaatcaatcggaagaaccaataggggagaag |
46963634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 46963714 - 46963790
Alignment:
| Q |
258 |
gcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaa |
335 |
Q |
| |
|
||||||||| |||||||||| ||| | |||||||| |||||||||||||| |||||| ||| ||| ||||||||||| |
|
|
| T |
46963714 |
gcaatcaatcagaagaatcaaaagatg-ggagaagtacaatgcaatcaatcggaagaaccaataggggagaagtgcaa |
46963790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 3889238 - 3889163
Alignment:
| Q |
25 |
aaccatctaaacataagaac-----ccaatcaaaccaaaccaaacaaaagaaccgatagagagaaacagccataca |
95 |
Q |
| |
|
||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||| ||||| || ||||||| |
|
|
| T |
3889238 |
aaccatccaaacataagaactaagtccaaccaaaccaaaccaaacaaaagaaccggtagggagaagcaaccataca |
3889163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 10236822 - 10236744
Alignment:
| Q |
28 |
catctaaacataagaacccaatcaaaccaaaccaaacaaaagaaccgatagagagaaacagccatacaaaagaaccaat |
106 |
Q |
| |
|
|||| ||||| ||||||| | |||||| || |||||||||||||||| ||| ||||| || ||||| | |||||||||| |
|
|
| T |
10236822 |
catccaaacaaaagaaccaagtcaaacaaatccaaacaaaagaaccgctagggagaagcaaccatatagaagaaccaat |
10236744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 26403228 - 26403166
Alignment:
| Q |
108 |
gagaggagcaaccaaacataaaaatcaataaggagaagtgcaattcaatcaatcataagaatc |
170 |
Q |
| |
|
||||| |||| ||| ||| || |||||||| ||||||||||||| |||||||||| ||||||| |
|
|
| T |
26403228 |
gagagaagcagccatacaaaagaatcaatagggagaagtgcaatgcaatcaatcaaaagaatc |
26403166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 346
Target Start/End: Original strand, 46963631 - 46963763
Alignment:
| Q |
212 |
gaagaagtgaaatcaatcagaagaattaaaagag--gagaaatgcagggcaat-caattagaagaatcataaggggaggagaagtgcaatgcaatcaatc |
308 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||| ||||| |||| ||||| |||| ||||||| || ||||| ||||| |||||||||||| |
|
|
| T |
46963631 |
gaagaagtgcaatcaatcagaagaatcaaaagagtggagaagtgcaatgcaatgcaatcagaagaaccaatagggg--gagaa-----atgcaatcaatc |
46963723 |
T |
 |
| Q |
309 |
agaagaatcaaaag--gtgagaagtgcaaagcaatcaatc |
346 |
Q |
| |
|
|||||||||||||| | ||||||| ||| |||||||||| |
|
|
| T |
46963724 |
agaagaatcaaaagatgggagaagtacaatgcaatcaatc |
46963763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 21813991 - 21813928
Alignment:
| Q |
259 |
caatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaagg |
323 |
Q |
| |
|
|||| ||| |||||||||| || ||||| |||||||||||| ||||| |||||||||||||||| |
|
|
| T |
21813991 |
caatgaatcagaagaatcaaaaagggag-agaagtgcaatggaatcacacagaagaatcaaaagg |
21813928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 189 - 323
Target Start/End: Original strand, 38583931 - 38584060
Alignment:
| Q |
189 |
aatcaatctaaagaatcaaaagggaagaagtgaaatcaatcagaagaattaaaagag-gagaaatgcagggcaatcaattagaagaatcataaggggagg |
287 |
Q |
| |
|
|||||||| |||||||||| ||| ||||||| |||||||||||||||| ||||| | |||||||||| |||||| |||||||||| ||||| || |
|
|
| T |
38583931 |
aatcaatcagaagaatcaaagggggagaagtgcaatcaatcagaagaatcaaaagggcgagaaatgcaatgcaatc----agaagaatcaaaaggg--gg |
38584024 |
T |
 |
| Q |
288 |
agaagtgcaatgcaatcaatcagaagaatcaaaagg |
323 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| |
|
|
| T |
38584025 |
agaagtgcaatgcaatcactcagaaaaatcaaaagg |
38584060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 303
Target Start/End: Original strand, 38583910 - 38584079
Alignment:
| Q |
133 |
caataaggagaagtgcaattcaatcaatcataagaatccataagggagaagtgcaaaatcaatctaaagaatcaaaaggg-aagaagtgaaat-caatca |
230 |
Q |
| |
|
|||||| |||||||||||| |||||||||| ||||||| | ||||||||||| |||||||| |||||||||||||| |||| || ||| |||||| |
|
|
| T |
38583910 |
caataaagagaagtgcaatacaatcaatcagaagaatcaaagggggagaagtgc--aatcaatcagaagaatcaaaagggcgagaaatgcaatgcaatca |
38584007 |
T |
 |
| Q |
231 |
gaagaattaaaa-gaggagaaatgcagggcaatcaattagaagaatcataaggggaggagaagtgcaatgcaat |
303 |
Q |
| |
|
||||||| |||| | |||||| |||| ||||||| | |||| ||||| ||||| |||||||||| ||||||| |
|
|
| T |
38584008 |
gaagaatcaaaagggggagaagtgcaatgcaatcactcagaaaaatcaaaaggg--ggagaagtgcgatgcaat |
38584079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29409358 - 29409407
Alignment:
| Q |
286 |
ggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaa |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||| |||||| |
|
|
| T |
29409358 |
ggagaagtgcaatgcaatcaatcagaagaatcaacaggggagacgtgcaa |
29409407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 8986534 - 8986463
Alignment:
| Q |
263 |
caattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaa |
335 |
Q |
| |
|
|||| |||||||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| |||||||||| |
|
|
| T |
8986534 |
caatcagaagaatcaaaagggg-ggagaagtgcaatgcaatcaatcggaagaaccaatagggtagaagtgcaa |
8986463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 29409336 - 29409429
Alignment:
| Q |
117 |
aaccaaacataaaaatcaataaggagaagtgcaattcaatcaatcataagaatccataagggagaagtgcaaaatcaatctaaagaatcaaaaggg |
212 |
Q |
| |
|
||||||||| || |||||||| ||||||||||||| |||||||||| ||||||| | | |||||| |||| |||||||| ||||||||| |||| |
|
|
| T |
29409336 |
aaccaaacagaagaatcaatagggagaagtgcaatgcaatcaatcagaagaatcaacaggggagacgtgc--aatcaatcagaagaatcaataggg |
29409429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 38583917 - 38583965
Alignment:
| Q |
287 |
gagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaa |
335 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| || ||||||||||| |
|
|
| T |
38583917 |
gagaagtgcaatacaatcaatcagaagaatcaaagggggagaagtgcaa |
38583965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 1173120 - 1173178
Alignment:
| Q |
63 |
acaaaagaaccgatagagagaaacagccatacaaaagaaccaattgagaggagcaaccaaa |
123 |
Q |
| |
|
|||||||||| | ||||||||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
1173120 |
acaaaagaacaggtagagagaagcagtcatacaaaagaaccaat--agaggagcaaccaaa |
1173178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 8986391 - 8986315
Alignment:
| Q |
258 |
gcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaa |
335 |
Q |
| |
|
||||||||| |||||||||| ||| | |||||||| |||||||||||||| |||||| ||| ||| ||||||||||| |
|
|
| T |
8986391 |
gcaatcaatcagaagaatcaaaagatg-ggagaagtacaatgcaatcaatcggaagaaccaataggggagaagtgcaa |
8986315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 346
Target Start/End: Complemental strand, 8986513 - 8986342
Alignment:
| Q |
176 |
gggagaagtgcaa---aatcaatctaaagaatcaaaagggaagaagtgaaatcaatcagaagaattaaaagag--gagaaatgcagggcaat-caattag |
269 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||| ||||| |||| || |
|
|
| T |
8986513 |
gggagaagtgcaatgcaatcaatcggaagaaccaatagggtagaagtgcaatcaatcggaagaatcaaaagagtggagaagtgcaatgcaatgcaatcag |
8986414 |
T |
 |
| Q |
270 |
aagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaag--gtgagaagtgcaaagcaatcaatc |
346 |
Q |
| |
|
||||| || ||||| ||||| |||||||||||||||||||||||||| | ||||||| ||| |||||||||| |
|
|
| T |
8986413 |
aagaaccaatagggg--gagaa-----atgcaatcaatcagaagaatcaaaagatgggagaagtacaatgcaatcaatc |
8986342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 32290916 - 32290876
Alignment:
| Q |
5 |
catcaaccactcaaagagagaaccatctaaacataagaacc |
45 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
32290916 |
catcaaccaatcaaagagagaaccatccaaacaaaagaacc |
32290876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 335
Target Start/End: Complemental strand, 16871189 - 16870994
Alignment:
| Q |
140 |
gagaagtgcaattcaatcaatcataagaatccataa---gggagaagtgcaaaatcaatctaaagaatcaaaag-ggaagaagtgaaat-caatcagaag |
234 |
Q |
| |
|
|||||||||||| |||||||||| | ||||| | || ||||||||||||| |||||| ||||| |||||| || ||||||| ||| |||||||||| |
|
|
| T |
16871189 |
gagaagtgcaatgcaatcaatcagacgaatcaaaaaagggggagaagtgcaa--tcaatcagaagaaccaaaagtgggagaagtgcaatgcaatcagaag |
16871092 |
T |
 |
| Q |
235 |
aattaaaagaggagaaatgcagggcaat-caattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgc |
333 |
Q |
| |
|
||| ||||| || || | || ||||| |||| |||||||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| || |||||| |
|
|
| T |
16871091 |
aatcaaaaggggggaga---agtgcaatgcaatcagaagaatcaaaagggg-ggagaagtgcaatgcaatcaatcggaagaaccaataggggaaaagtgc |
16870996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 16871216 - 16871155
Alignment:
| Q |
259 |
caatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaa |
321 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
16871216 |
caatcaatcagaagaatcaaaaggggag-agaagtgcaatgcaatcaatcagacgaatcaaaa |
16871155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 16871147 - 16871021
Alignment:
| Q |
214 |
agaagtgaaatcaatcagaagaattaaaagagg-agaaatgcagggcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaa |
312 |
Q |
| |
|
||||||| ||||||||||||||| ||||| || |||| |||| ||||||| ||||||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
16871147 |
agaagtgcaatcaatcagaagaaccaaaagtgggagaagtgcaatgcaatca----gaagaatcaaaagggg-ggagaagtgcaatgca----atcagaa |
16871057 |
T |
 |
| Q |
313 |
gaatcaaaa--ggtgagaagtgcaaagcaatcaatc |
346 |
Q |
| |
|
||||||||| || ||||||||||| |||||||||| |
|
|
| T |
16871056 |
gaatcaaaaggggggagaagtgcaatgcaatcaatc |
16871021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 16870922 - 16870846
Alignment:
| Q |
258 |
gcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaagtgcaa |
335 |
Q |
| |
|
||||||||| |||||||||| ||| | |||||||| |||||||||||||| |||||| ||| ||| ||||||||||| |
|
|
| T |
16870922 |
gcaatcaatcagaagaatcaaaagatg-ggagaagtacaatgcaatcaatcggaagaaccaacaggggagaagtgcaa |
16870846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 16871255 - 16871166
Alignment:
| Q |
263 |
caattagaagaatcataaggggaggagaagtgcaatg---caatcaatcagaagaatcaaaa--ggtgagaagtgcaaagcaatcaatcag |
348 |
Q |
| |
|
|||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
16871255 |
caatcagaagaatcaagagggg-ggagaagtgcaatcaaacaatcaatcagaagaatcaaaaggggagagaagtgcaatgcaatcaatcag |
16871166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 7259241 - 7259292
Alignment:
| Q |
54 |
ccaaaccaaacaaaagaaccgatagagagaaacagccatacaaaagaaccaat |
106 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
7259241 |
ccaaaccagacaaaagaaccgatag-gagaaacaaccatacataagaaccaat |
7259292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 16870925 - 16870873
Alignment:
| Q |
296 |
aatgcaatcaatcagaagaatcaaaag--gtgagaagtgcaaagcaatcaatc |
346 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| ||| |||||||||| |
|
|
| T |
16870925 |
aatgcaatcaatcagaagaatcaaaagatgggagaagtacaatgcaatcaatc |
16870873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 16871215 - 16871096
Alignment:
| Q |
222 |
aatcaatcagaagaattaaaagag--gagaaatgcagggcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaa |
319 |
Q |
| |
|
|||||||||||||||| ||||| | ||||| |||| ||||||||| ||| |||||| || || ||||||| |||||||||||||||||| ||| |
|
|
| T |
16871215 |
aatcaatcagaagaatcaaaaggggagagaagtgcaatgcaatcaatcagacgaatcaaaaaagggggagaag-----tgcaatcaatcagaagaaccaa |
16871121 |
T |
 |
| Q |
320 |
aag-gtgagaagtgcaaagcaatca |
343 |
Q |
| |
|
||| | ||||||||||| ||||||| |
|
|
| T |
16871120 |
aagtgggagaagtgcaatgcaatca |
16871096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 32041708 - 32041645
Alignment:
| Q |
49 |
tcaaaccaaaccaaacaaaagaaccgatagagagaaacagccatacaaaagaaccaattgagag |
112 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||| || |||||||||||||| ||| ||||| |
|
|
| T |
32041708 |
tcaaactaaaccaaacaaaagaaccggtagagagaatcaaccatacaaaagaacaaatagagag |
32041645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 20242425 - 20242337
Alignment:
| Q |
123 |
acataaaaatcaataaggagaagtgcaattcaatcaatcataagaatccataa-gggagaagtgcaaaatcaatctaaagaatcaaaaggg |
212 |
Q |
| |
|
||||||||| ||||| |||||||||||| | ||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
20242425 |
acataaaaaccaatagagagaagtgcaatgctctcaatcagaagaatccataaggggataagtgc--aatcaatcaaaagaatcaaaaggg |
20242337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 20250735 - 20250823
Alignment:
| Q |
123 |
acataaaaatcaataaggagaagtgcaattcaatcaatcataagaatccataa-gggagaagtgcaaaatcaatctaaagaatcaaaaggg |
212 |
Q |
| |
|
||||||||| ||||| |||||||||||| | ||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
20250735 |
acataaaaaccaatagagagaagtgcaatgctctcaatcagaagaatccataaggggataagtgc--aatcaatcaaaagaatcaaaaggg |
20250823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 22860918 - 22860737
Alignment:
| Q |
139 |
ggagaagtgcaattcaatcaatcataagaatccataaggg-agaagtgcaaaatcaatctaaagaatcaaaa--ggga-agaagtgaaatcaatcagaag |
234 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| ||| ||| |||||||||| |||| ||||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
22860918 |
ggagaagtgcaatgcaatcaatcaaaagaatcaatagggggagaagtgcaatgg-aatcagaagaatcaaaaaggggagagaagtgcaatcaatcagaag |
22860820 |
T |
 |
| Q |
235 |
aattaaaagaggagaaatgcagggcaat-caattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaa |
321 |
Q |
| |
|
|| ||||| || || | || ||||| |||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
22860819 |
aaccaaaaggggggaga---agtgcaatgcaatcagaagaatcaaaaggga--gagaagtgcaatgcaatcaaacagaagaatcaaaa |
22860737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 353
Target Start/End: Complemental strand, 22860919 - 22860743
Alignment:
| Q |
176 |
gggagaagtgcaa---aatcaatctaaagaatcaaaaggga-agaagtgaaatc-aatcagaagaattaaaagaggagaaatgcagggcaatcaattaga |
270 |
Q |
| |
|
||||||||||||| |||||||| |||||||||| |||| ||||||| ||| |||||||||||| |||| ||| || | | || ||||||||| ||| |
|
|
| T |
22860919 |
gggagaagtgcaatgcaatcaatcaaaagaatcaatagggggagaagtgcaatggaatcagaagaatcaaaa-aggggaga-gaagtgcaatcaatcaga |
22860822 |
T |
 |
| Q |
271 |
agaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaa-ggtgagaagtgcaaagcaatcaatcaggagaa |
353 |
Q |
| |
|
|||| || |||||| |||||||||||||||||||| |||||||||||| || ||||||||||| |||||||| ||| |||| |
|
|
| T |
22860821 |
agaaccaaaagggg-ggagaagtgcaatgcaatca----gaagaatcaaaagggagagaagtgcaatgcaatcaaacagaagaa |
22860743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 22860946 - 22860895
Alignment:
| Q |
296 |
aatgcaatcaatcagaagaatcaaaaggtgagaagtgcaaagcaatcaatca |
347 |
Q |
| |
|
||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
22860946 |
aatgcaatcaatcggaagaaccaaaaggggagaagtgcaatgcaatcaatca |
22860895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 18981407 - 18981357
Alignment:
| Q |
298 |
tgcaatcaatcagaagaatcaaaaggtg-agaagtgcaaagcaatcaatca |
347 |
Q |
| |
|
|||||||||||||||||||||||||| | | |||||||| ||||||||||| |
|
|
| T |
18981407 |
tgcaatcaatcagaagaatcaaaaggagaaaaagtgcaatgcaatcaatca |
18981357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 18984262 - 18984209
Alignment:
| Q |
59 |
ccaaacaaaagaaccgatagagagaaacagccatacaaaagaaccaattgagag |
112 |
Q |
| |
|
|||||||||||||||| |||||| || ||||||||| |||||||||| ||||| |
|
|
| T |
18984262 |
ccaaacaaaagaaccggtagagataactagccatacacaagaaccaatagagag |
18984209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 18984211 - 18984142
Alignment:
| Q |
140 |
gagaagtgcaattcaatcaatcataagaatccataa-gggagaagtgcaaaatcaatctaaagaatcaaaag |
210 |
Q |
| |
|
|||||||||||| | |||||||| || ||||||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
18984211 |
gagaagtgcaatgctatcaatcagaaaaatccataaggggagaagtgc--aatcaatcagaagaatcaaaag |
18984142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 9168107 - 9168258
Alignment:
| Q |
93 |
acaaaagaaccaattgagaggagcaaccaaacataaaaatcaataaggagaagtgcaattcaatcaatcataagaatccat-aagggagaagtgcaaaat |
191 |
Q |
| |
|
|||||||||||| | ||||| || | ||| |||||| |||||||| | ||||||||||| | |||||| | |||||||||| ||||||||||||| ||| |
|
|
| T |
9168107 |
acaaaagaaccagtagagagaagtagccatacataagaatcaataggtagaagtgcaatgctatcaattagaagaatccataaagggagaagtgc--aat |
9168204 |
T |
 |
| Q |
192 |
caatctaaagaatcaaaagg-gaagaagtgaaat-caatcagaagaattaaaag |
243 |
Q |
| |
|
| ||| ||||||||||||| | ||||||| ||| |||| |||||||| ||||| |
|
|
| T |
9168205 |
cgatcagaagaatcaaaaggaggagaagtgcaatgcaataagaagaatgaaaag |
9168258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 42530868 - 42530806
Alignment:
| Q |
189 |
aatcaatctaaagaatcaaaaggg-aagaagtgaaatcaatcagaagaattaaaagaggagaa |
250 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| |||||||||||||||| ||||| |||||| |
|
|
| T |
42530868 |
aatcaatcagaagaatcaaaaggggaagaagtgcaatcaatcagaagaatcaaaaggggagaa |
42530806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 42530913 - 42530833
Alignment:
| Q |
258 |
gcaatcaattagaagaatcataag-gggaggag-aagtgcaatgcaatcaatcagaagaatcaaaaggtg-agaagtgcaa |
335 |
Q |
| |
|
||||||||| ||||||| || ||| ||||| || ||||| |||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
42530913 |
gcaatcaatcagaagaaccaaaagagggagaagtaagtgaaatgcaatcaatcagaagaatcaaaaggggaagaagtgcaa |
42530833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 50295757 - 50295679
Alignment:
| Q |
259 |
caatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaa--ggtgagaagtgcaa |
335 |
Q |
| |
|
|||||||| || ||||| | |||||| ||||||||||||||||| |||||||| |||||||| || ||||||||||| |
|
|
| T |
50295757 |
caatcaatcagcagaattaaaagggggggagaagtgcaatgcaaaaaatcagaataatcaaaaagggggagaagtgcaa |
50295679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 50295907 - 50295873
Alignment:
| Q |
286 |
ggagaagtgcaatgcaatcaatcagaagaatcaaa |
320 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |
|
|
| T |
50295907 |
ggagaagtgcaatgcaatcaatcaaaagaatcaaa |
50295873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 42530870 - 42530805
Alignment:
| Q |
258 |
gcaatcaattagaagaatcataaggggaggagaagtgcaatgcaatcaatcagaagaatcaaaaggtgagaag |
330 |
Q |
| |
|
||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
42530870 |
gcaatcaatcagaagaatcaaaagggga--agaagtgcaat-----caatcagaagaatcaaaaggggagaag |
42530805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 50295928 - 50295884
Alignment:
| Q |
304 |
caatcagaagaatcaaaag-gtgagaagtgcaaagcaatcaatca |
347 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
50295928 |
caatcagaagaatcaaaagagggagaagtgcaatgcaatcaatca |
50295884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 14629 - 14682
Alignment:
| Q |
59 |
ccaaacaaaagaaccgatagagagaaacagccatacaaaagaaccaattgagag |
112 |
Q |
| |
|
|||||||||||||||| |||||| || ||||||||| |||||||||| ||||| |
|
|
| T |
14629 |
ccaaacaaaagaaccggtagagataactagccatacataagaaccaatagagag |
14682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 14663 - 14749
Alignment:
| Q |
123 |
acataaaaatcaataaggagaagtgcaattcaatcaatcataagaatccataa-gggagaagtgcaaaatcaatctaaagaatcaaaag |
210 |
Q |
| |
|
|||||| || ||||| |||||||||||| | |||||||| || ||||||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
14663 |
acataagaaccaatagagagaagtgcaatgctatcaatcagaaaaatccataaggggagaagtgc--aatcaatcagaagaatcaaaag |
14749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University