View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8981_low_110 (Length: 453)

Name: NF8981_low_110
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8981_low_110
NF8981_low_110
[»] chr7 (39 HSPs)
chr7 (95-302)||(9622933-9623140)
chr7 (305-453)||(9623168-9623317)
chr7 (20-103)||(9622257-9622340)
chr7 (332-453)||(42515533-42515653)
chr7 (338-453)||(6719111-6719225)
chr7 (348-451)||(42515096-42515199)
chr7 (348-453)||(11517426-11517530)
chr7 (338-453)||(2193251-2193365)
chr7 (348-453)||(2941794-2941899)
chr7 (348-453)||(6747635-6747740)
chr7 (348-453)||(9124963-9125068)
chr7 (350-453)||(13125173-13125276)
chr7 (354-453)||(29357493-29357592)
chr7 (348-453)||(2611689-2611794)
chr7 (348-453)||(25182365-25182470)
chr7 (348-453)||(28495858-28495963)
chr7 (374-453)||(31743861-31743940)
chr7 (352-453)||(35474158-35474259)
chr7 (352-449)||(36015452-36015549)
chr7 (352-453)||(36422260-36422361)
chr7 (332-453)||(46425730-46425850)
chr7 (349-453)||(28495645-28495749)
chr7 (332-448)||(33316716-33316832)
chr7 (348-451)||(679821-679923)
chr7 (338-453)||(2189139-2189253)
chr7 (338-453)||(34405628-34405742)
chr7 (383-453)||(2465772-2465842)
chr7 (348-453)||(5406625-5406730)
chr7 (348-453)||(18833290-18833395)
chr7 (332-453)||(22529272-22529392)
chr7 (337-453)||(29039057-29039172)
chr7 (332-451)||(35527160-35527278)
chr7 (409-451)||(26421344-26421386)
chr7 (338-444)||(26957603-26957708)
chr7 (388-453)||(2465968-2466033)
chr7 (409-453)||(43233478-43233522)
chr7 (353-422)||(13124769-13124838)
chr7 (368-453)||(26421797-26421882)
chr7 (384-424)||(16811912-16811952)
[»] chr4 (45 HSPs)
chr4 (95-302)||(13614105-13614312)
chr4 (305-453)||(13613928-13614077)
chr4 (20-103)||(13614905-13614988)
chr4 (332-453)||(9423889-9424009)
chr4 (348-453)||(4127920-4128025)
chr4 (332-453)||(50398569-50398689)
chr4 (338-453)||(12692030-12692144)
chr4 (338-453)||(24629464-24629578)
chr4 (348-451)||(35871632-35871735)
chr4 (332-453)||(14351784-14351904)
chr4 (348-453)||(31817883-31817988)
chr4 (332-453)||(50399024-50399144)
chr4 (338-453)||(23942820-23942934)
chr4 (338-448)||(29628703-29628812)
chr4 (348-453)||(14572181-14572286)
chr4 (348-453)||(44471356-44471461)
chr4 (348-453)||(49998640-49998745)
chr4 (338-453)||(4127468-4127582)
chr4 (338-453)||(21220362-21220476)
chr4 (352-453)||(21067290-21067391)
chr4 (348-453)||(31817429-31817534)
chr4 (332-453)||(51331312-51331432)
chr4 (338-453)||(1645780-1645894)
chr4 (338-453)||(3169201-3169315)
chr4 (348-453)||(8467831-8467936)
chr4 (388-453)||(14571752-14571817)
chr4 (348-453)||(23350314-23350419)
chr4 (408-453)||(27026567-27026612)
chr4 (338-453)||(24629008-24629125)
chr4 (384-447)||(53391927-53391990)
chr4 (338-453)||(53996146-53996260)
chr4 (408-453)||(44470905-44470950)
chr4 (409-453)||(1464212-1464256)
chr4 (393-453)||(7678653-7678713)
chr4 (338-453)||(4185709-4185824)
chr4 (331-453)||(43928994-43929116)
chr4 (348-449)||(17028878-17028979)
chr4 (408-453)||(17628575-17628620)
chr4 (408-453)||(20306192-20306237)
chr4 (348-453)||(41869922-41870027)
chr4 (348-451)||(17029334-17029437)
chr4 (410-453)||(50814856-50814899)
chr4 (370-447)||(21067760-21067837)
chr4 (409-453)||(27029342-27029386)
chr4 (407-451)||(34554492-34554536)
[»] chr5 (30 HSPs)
chr5 (348-453)||(3886638-3886743)
chr5 (348-453)||(2473963-2474068)
chr5 (338-453)||(10926983-10927097)
chr5 (338-453)||(10927440-10927554)
chr5 (338-453)||(17445492-17445606)
chr5 (348-453)||(189072-189177)
chr5 (348-453)||(1821910-1822015)
chr5 (338-453)||(34867785-34867899)
chr5 (348-453)||(22556540-22556645)
chr5 (337-453)||(8391359-8391473)
chr5 (332-451)||(20039513-20039631)
chr5 (338-453)||(21886183-21886297)
chr5 (348-453)||(8642071-8642176)
chr5 (338-453)||(27646872-27646986)
chr5 (338-453)||(42788683-42788797)
chr5 (352-453)||(2193824-2193925)
chr5 (348-453)||(2474409-2474514)
chr5 (348-453)||(3887094-3887199)
chr5 (348-453)||(22556973-22557078)
chr5 (388-453)||(34371656-34371721)
chr5 (388-453)||(34372112-34372177)
chr5 (337-453)||(30719842-30719957)
chr5 (348-453)||(39146943-39147048)
chr5 (348-424)||(22975076-22975152)
chr5 (349-451)||(11160720-11160822)
chr5 (337-450)||(2058696-2058808)
chr5 (332-451)||(5066930-5067048)
chr5 (352-451)||(18304439-18304538)
chr5 (354-453)||(24182282-24182381)
chr5 (393-451)||(42429194-42429252)
[»] chr1 (41 HSPs)
chr1 (348-453)||(35760951-35761056)
chr1 (348-453)||(20061228-20061333)
chr1 (332-453)||(30872987-30873107)
chr1 (348-453)||(35759645-35759750)
chr1 (105-280)||(7584230-7584410)
chr1 (338-453)||(43057560-43057674)
chr1 (348-453)||(50002744-50002849)
chr1 (338-453)||(20054117-20054231)
chr1 (338-453)||(20054573-20054687)
chr1 (338-453)||(20055029-20055143)
chr1 (338-453)||(20055485-20055599)
chr1 (338-453)||(20055941-20056055)
chr1 (338-453)||(20056397-20056511)
chr1 (338-453)||(20057300-20057414)
chr1 (338-453)||(20845698-20845812)
chr1 (338-453)||(50002322-50002436)
chr1 (338-453)||(38340901-38341015)
chr1 (348-453)||(46693772-46693878)
chr1 (355-453)||(20057756-20057854)
chr1 (348-453)||(2634928-2635033)
chr1 (348-453)||(16451970-16452075)
chr1 (348-453)||(16461123-16461228)
chr1 (100-281)||(7096886-7097084)
chr1 (332-451)||(12883513-12883631)
chr1 (338-453)||(43057102-43057215)
chr1 (338-453)||(52250201-52250315)
chr1 (348-453)||(2328319-2328424)
chr1 (19-72)||(7583699-7583753)
chr1 (355-453)||(16907245-16907343)
chr1 (408-453)||(20060377-20060422)
chr1 (20-72)||(7097665-7097717)
chr1 (338-453)||(10820587-10820701)
chr1 (338-453)||(50003112-50003226)
chr1 (322-451)||(7548070-7548198)
chr1 (408-453)||(20056853-20056898)
chr1 (348-453)||(23180734-23180839)
chr1 (348-453)||(31822700-31822805)
chr1 (105-204)||(32492226-32492326)
chr1 (394-453)||(51372911-51372970)
chr1 (70-103)||(7097597-7097630)
chr1 (336-453)||(16410760-16410877)
[»] chr2 (31 HSPs)
chr2 (305-453)||(33174918-33175067)
chr2 (338-453)||(18098915-18099029)
chr2 (352-453)||(16378945-16379046)
chr2 (348-453)||(24818330-24818435)
chr2 (337-453)||(1953149-1953264)
chr2 (349-453)||(30966239-30966343)
chr2 (349-453)||(30966695-30966799)
chr2 (338-453)||(25434093-25434207)
chr2 (352-453)||(25338034-25338135)
chr2 (355-453)||(27882963-27883061)
chr2 (305-451)||(38898951-38899098)
chr2 (352-453)||(41754297-41754398)
chr2 (338-453)||(16379388-16379502)
chr2 (332-453)||(33174494-33174612)
chr2 (348-453)||(5399854-5399959)
chr2 (348-453)||(29804686-29804791)
chr2 (338-453)||(11388184-11388296)
chr2 (355-453)||(83028-83126)
chr2 (348-453)||(1912529-1912634)
chr2 (348-453)||(15619902-15620007)
chr2 (348-453)||(29259657-29259762)
chr2 (338-453)||(1707037-1707150)
chr2 (338-453)||(18447955-18448069)
chr2 (388-453)||(8256570-8256635)
chr2 (384-453)||(11394575-11394643)
chr2 (408-453)||(33771065-33771110)
chr2 (371-449)||(20502050-20502128)
chr2 (408-453)||(30963300-30963345)
chr2 (409-453)||(8073957-8074001)
chr2 (353-453)||(30963757-30963857)
chr2 (409-453)||(13191039-13191083)
[»] scaffold0020 (1 HSPs)
scaffold0020 (348-453)||(107500-107605)
[»] scaffold0007 (1 HSPs)
scaffold0007 (348-453)||(142311-142416)
[»] chr6 (35 HSPs)
chr6 (332-453)||(20896725-20896845)
chr6 (338-453)||(3652481-3652595)
chr6 (305-453)||(20126219-20126368)
chr6 (332-453)||(6330949-6331069)
chr6 (348-453)||(17027568-17027673)
chr6 (332-453)||(31821729-31821849)
chr6 (350-453)||(13492795-13492898)
chr6 (348-453)||(16519972-16520077)
chr6 (338-453)||(20850316-20850430)
chr6 (338-453)||(23986354-23986468)
chr6 (348-453)||(7911882-7911987)
chr6 (332-453)||(17850907-17851027)
chr6 (352-453)||(27334169-27334270)
chr6 (352-453)||(27394909-27395010)
chr6 (339-451)||(9440348-9440459)
chr6 (348-451)||(7912314-7912417)
chr6 (348-447)||(17731156-17731255)
chr6 (354-453)||(21311981-21312080)
chr6 (352-446)||(2720608-2720702)
chr6 (388-453)||(13191550-13191615)
chr6 (352-447)||(14771762-14771857)
chr6 (348-425)||(9440493-9440570)
chr6 (408-453)||(13492396-13492441)
chr6 (332-453)||(17851363-17851483)
chr6 (408-453)||(20735759-20735804)
chr6 (348-453)||(28065875-28065980)
chr6 (338-453)||(2681253-2681367)
chr6 (348-453)||(9352066-9352171)
chr6 (374-451)||(9440896-9440973)
chr6 (384-453)||(11062325-11062394)
chr6 (352-453)||(23776449-23776550)
chr6 (348-453)||(32292889-32292994)
chr6 (408-452)||(28583027-28583071)
chr6 (408-453)||(15929646-15929691)
chr6 (348-453)||(21311519-21311624)
[»] chr3 (37 HSPs)
chr3 (348-453)||(31284313-31284418)
chr3 (348-453)||(25248115-25248220)
chr3 (348-453)||(41472305-41472409)
chr3 (348-453)||(20885154-20885259)
chr3 (352-453)||(28561754-28561855)
chr3 (352-453)||(39653172-39653273)
chr3 (348-453)||(7477195-7477300)
chr3 (348-453)||(7493885-7493990)
chr3 (348-453)||(16811385-16811490)
chr3 (348-453)||(25230285-25230390)
chr3 (348-453)||(25237872-25237977)
chr3 (356-453)||(25239114-25239211)
chr3 (348-453)||(30529691-30529796)
chr3 (352-453)||(50347754-50347855)
chr3 (348-451)||(25230744-25230847)
chr3 (348-451)||(25238331-25238434)
chr3 (348-453)||(8067284-8067389)
chr3 (352-453)||(11180071-11180172)
chr3 (338-453)||(14813944-14814058)
chr3 (348-453)||(27187367-27187472)
chr3 (348-453)||(39640941-39641046)
chr3 (332-451)||(2911084-2911202)
chr3 (338-453)||(37045030-37045144)
chr3 (387-453)||(13150591-13150657)
chr3 (352-453)||(13150136-13150237)
chr3 (352-453)||(32227258-32227359)
chr3 (352-453)||(32227509-32227609)
chr3 (332-453)||(32796972-32797092)
chr3 (394-453)||(32386771-32386830)
chr3 (348-447)||(41474001-41474100)
chr3 (408-453)||(14820218-14820263)
chr3 (384-453)||(25238721-25238790)
chr3 (384-453)||(29224364-29224433)
chr3 (409-453)||(4067397-4067441)
chr3 (412-453)||(3890046-3890087)
chr3 (348-453)||(16810929-16811034)
chr3 (412-453)||(25802585-25802626)
[»] chr8 (36 HSPs)
chr8 (348-451)||(2044062-2044165)
chr8 (338-453)||(10844878-10844992)
chr8 (338-453)||(27925894-27926008)
chr8 (338-453)||(32292392-32292506)
chr8 (338-453)||(41659142-41659256)
chr8 (355-453)||(28375091-28375189)
chr8 (352-453)||(28453346-28453447)
chr8 (348-453)||(34308516-34308621)
chr8 (337-453)||(27819283-27819398)
chr8 (348-451)||(8080381-8080484)
chr8 (338-453)||(22026374-22026488)
chr8 (349-453)||(17103086-17103190)
chr8 (338-453)||(22549032-22549146)
chr8 (354-453)||(27021916-27022015)
chr8 (352-453)||(10844652-10844753)
chr8 (352-453)||(12827291-12827392)
chr8 (352-453)||(22548586-22548687)
chr8 (384-453)||(25147576-25147645)
chr8 (348-453)||(27022375-27022480)
chr8 (356-452)||(21316147-21316243)
chr8 (348-453)||(34308972-34309081)
chr8 (348-451)||(6464949-6465052)
chr8 (348-453)||(22840566-22840671)
chr8 (353-453)||(22705181-22705281)
chr8 (354-453)||(33852295-33852394)
chr8 (357-447)||(1297020-1297110)
chr8 (384-453)||(12100731-12100800)
chr8 (408-453)||(25144836-25144881)
chr8 (363-450)||(3744657-3744744)
chr8 (343-453)||(3745100-3745210)
chr8 (348-453)||(15567593-15567698)
chr8 (354-451)||(25147977-25148074)
chr8 (408-449)||(41913034-41913075)
chr8 (409-453)||(6466775-6466819)
chr8 (409-453)||(15568042-15568086)
chr8 (409-453)||(30334945-30334989)
[»] scaffold0018 (1 HSPs)
scaffold0018 (348-453)||(10304-10409)
[»] scaffold0322 (1 HSPs)
scaffold0322 (348-453)||(18970-19075)
[»] scaffold0047 (2 HSPs)
scaffold0047 (348-453)||(18171-18276)
scaffold0047 (348-453)||(17635-17740)
[»] scaffold0040 (1 HSPs)
scaffold0040 (348-453)||(2247-2352)
[»] scaffold0499 (1 HSPs)
scaffold0499 (354-453)||(2088-2187)
[»] scaffold0022 (2 HSPs)
scaffold0022 (348-453)||(162715-162820)
scaffold0022 (384-453)||(69852-69921)
[»] scaffold0005 (2 HSPs)
scaffold0005 (348-453)||(245090-245195)
scaffold0005 (388-453)||(245559-245624)
[»] scaffold0664 (1 HSPs)
scaffold0664 (354-453)||(4019-4118)
[»] scaffold0168 (1 HSPs)
scaffold0168 (348-451)||(2746-2849)
[»] scaffold0088 (1 HSPs)
scaffold0088 (338-453)||(23668-23782)
[»] scaffold0024 (1 HSPs)
scaffold0024 (348-453)||(105724-105829)
[»] scaffold0333 (1 HSPs)
scaffold0333 (338-453)||(4556-4670)
[»] scaffold0243 (1 HSPs)
scaffold0243 (338-453)||(1215-1329)
[»] scaffold0002 (1 HSPs)
scaffold0002 (352-453)||(154765-154866)
[»] scaffold0557 (1 HSPs)
scaffold0557 (393-453)||(2154-2214)
[»] scaffold0391 (1 HSPs)
scaffold0391 (400-452)||(14797-14849)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 3e-95; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 95 - 302
Target Start/End: Original strand, 9622933 - 9623140
Alignment:
Q  95 agtttttacggttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttcaaatgcaggggaatattttcaacgtgcta 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  9622933 agtttttacggttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttcaaatgca-gggaatattttcaacctgcta 9623031  T
Q  195 ctcaagctgattgtgaaatcttgattcactcagtatgccaagcccg-agtgggagaaccatcacgacaaagatagagcatcggtcaatataacacccaag 293  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  9623032 ctcaagctgattgtgaaatcttgattcactcagtatgccaagctcgcagtgggagaaacatcacgacaaaaatagagcatcggtcaatataacacccaag 9623131  T
Q  294 ctgatgagg 302  Q
    |||||||||    
T  9623132 ctgatgagg 9623140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 453
Target Start/End: Original strand, 9623168 - 9623317
Alignment:
Q  305 catgataatgagtggtacctgacaactt--agacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaa 402  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||  || |||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  9623168 catgataatgagtggtacctgacaacttttagataaaccgaatcacaat-ggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaa 9623266  T
Q  403 ggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9623267 ggagtacttataagaattgtttgataccacctatatcaacaagatgcatct 9623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 9622257 - 9622340
Alignment:
Q  20 ttctcgttatggagtgatttttcaggctttagctgagttctttggaaccctttactgtttattcgaaatatgcagagtttttac 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9622257 ttctcgttatggagtgatttttcaggcttaagctgagttctttggaaccctttactgtttattcgaaatatgcagagtttttac 9622340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 42515533 - 42515653
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| |||| ||||||||||||| |||||| |||| | | |||||||| |||||| ||||||  ||||||||||| |||||| ||| |    
T  42515533 tagacgaaccgaatca-catcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtacta 42515631  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  42515632 cctatatcaacaagatgcatct 42515653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 6719225 - 6719111
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||| |||||||||||||| ||||||  ||| | | ||| |||| |||||| |||||| ||||||||||||||||||| ||| |||||||    
T  6719225 aaccgaatca-cattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctata 6719127  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  6719126 tcaacaagatgcatct 6719111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 42515096 - 42515199
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||||| | |||||||| |||| | ||||||   ||||||||||||||||| ||| |||||||||||||||||    
T  42515096 acatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagat 42515195  T
Q  448 gcat 451  Q
    ||||    
T  42515196 gcat 42515199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 11517530 - 11517426
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| ||| || | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  11517530 acatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttataagaattgtttggtactacctatatcaacaagat 11517432  T
Q  448 gcatct 453  Q
    ||||||    
T  11517431 gcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 2193251 - 2193365
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||  |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  2193251 aaccgaatca-caccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 2193349  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  2193350 tcaacaagatgcatct 2193365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 2941899 - 2941794
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||||||| |||||| ||| || | ||| |||| |||||| ||||||  ||| |||||||||||||| ||| |||||||||||||||||    
T  2941899 acatcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagat 2941800  T
Q  448 gcatct 453  Q
    ||||||    
T  2941799 gcatct 2941794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 6747740 - 6747635
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| |||||||||||||| |||||| |||| | | |||| ||| |||||| ||||||  | |||||||||||||||| ||| |||||||||||||||||    
T  6747740 acattggaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagat 6747641  T
Q  448 gcatct 453  Q
    ||||||    
T  6747640 gcatct 6747635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 9124963 - 9125068
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| |||  ||||| |||||| | ||||||||  |||||  |||||  |||||||||||||||||| ||| |||||||||||||||||    
T  9124963 acatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaacaagat 9125062  T
Q  448 gcatct 453  Q
    ||||||    
T  9125063 gcatct 9125068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 453
Target Start/End: Complemental strand, 13125276 - 13125173
Alignment:
Q  350 atcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgc 449  Q
    |||||||||||||||||  ||||| | |||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||| ||||||||||    
T  13125276 atcggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgc 13125177  T
Q  450 atct 453  Q
    ||||    
T  13125176 atct 13125173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 29357592 - 29357493
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||| || | ||||||||||| | ||| |||| |||||| |||||| || |||||||||||||||| ||| | |||||||||||||||||||||    
T  29357592 gaatgagaggtatcccgaggtcgtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatct 29357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 2611794 - 2611689
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||| | |||||||| || | | ||||||||  ||||| ||||||  |||||||||||||||||| ||| | ||||| |||||||||    
T  2611794 acatcggaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagat 2611695  T
Q  448 gcatct 453  Q
    ||||||    
T  2611694 gcatct 2611689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 25182365 - 25182470
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| ||| |||||   ||||| | |||||||| |||||| ||||||   ||||||||||||||||| ||| |||||||||||||||||    
T  25182365 acatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 25182464  T
Q  448 gcatct 453  Q
     |||||    
T  25182465 acatct 25182470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 28495858 - 28495963
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||  ||||| |||| | | ||| |||| |||||| ||||||  ||||||||||| |||| | ||| |||||||||||||||||    
T  28495858 acatcggaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagat 28495957  T
Q  448 gcatct 453  Q
    ||||||    
T  28495958 gcatct 28495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 31743940 - 31743861
Alignment:
Q  374 tcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||| |||||||||| |||||| |||||| ||||||||||||| ||||| | | | |||||||||||||||||||||    
T  31743940 tcgtgcaagcatgagactgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatct 31743861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 35474259 - 35474158
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| || |||||||| | | |||||||| |||||| |||| |   ||||||||||||||||  ||| || ||||||||||||||||||    
T  35474259 cggaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcat 35474160  T
Q  452 ct 453  Q
    ||    
T  35474159 ct 35474158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 449
Target Start/End: Complemental strand, 36015549 - 36015452
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgc 449  Q
    ||||||||||||||| |  |||  ||||| | ||||||||||||||| ||||||  ||||| |||||||||||| ||| || ||||||||||||||||    
T  36015549 cggaatgagagggatcccaaggcagtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgc 36015452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 36422260 - 36422361
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| || ||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  36422260 cggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 36422359  T
Q  452 ct 453  Q
    ||    
T  36422360 ct 36422361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 46425730 - 46425850
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| |||||||||||||||||| |||||  | || | | ||| |||| |||||| |||  |  |||||||||||||||||| ||  |    
T  46425730 tagacaagccgaatca-catcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataaggcttataagaattgtttggtatta 46425828  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  46425829 cctatatcaacaagatgcatct 46425850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 453
Target Start/End: Complemental strand, 28495749 - 28495645
Alignment:
Q  349 catcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatg 448  Q
    |||||||||||||||||| ||||||||||| | | ||| |||| |||||| ||||||   |||||||||||||||   |   ||||||||||||||||||    
T  28495749 catcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatg 28495650  T
Q  449 catct 453  Q
    |||||    
T  28495649 catct 28495645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 448
Target Start/End: Original strand, 33316716 - 33316832
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||||| ||||| ||||||||||||||   ||| ||| |||||||| | |||||||| |||||| ||||||    ||||||||||||||||| |  |    
T  33316716 tagacaaactgaatccacatcggaatgagataaattttgatgtcgtgcaggtatgagactacatggttgaaggaaaaattataagaattgtttgacaata 33316815  T
Q  432 cctatatcaacaagatg 448  Q
    | |||||||||||||||    
T  33316816 cttatatcaacaagatg 33316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 679821 - 679923
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||||||| ||||||||||| | | ||| || | |||||  ||||||  |||||||||||||| ||| ||| |||||||||||||||||    
T  679821 acatcagaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagat 679919  T
Q  448 gcat 451  Q
    ||||    
T  679920 gcat 679923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 2189139 - 2189253
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | ||||||  ||||| |  || |||| |||||| ||| ||  ||||||||||||||||||  || |||||||    
T  2189139 aaccgaatca-caccggaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctata 2189237  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  2189238 tcaacaagatgcatct 2189253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 34405742 - 34405628
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||||| || ||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||    
T  34405742 aaccgaatca-caccggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctata 34405644  T
Q  438 tcaacaagatgcatct 453  Q
    |||||| |||||||||    
T  34405643 tcaacaggatgcatct 34405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 2465772 - 2465842
Alignment:
Q  383 catgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||| |||||| ||||||  |||||||||| ||||||| ||| |||||||||||||||||||||||    
T  2465772 catgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatct 2465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 5406730 - 5406625
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||| |||||| || | |||||||  | ||| |||| |||||| ||||||    |||||||||||||||| ||  |||||||||||||||||    
T  5406730 acatcggaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaacaagat 5406631  T
Q  448 gcatct 453  Q
    ||||||    
T  5406630 gcatct 5406625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 18833290 - 18833395
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||| | |||||| ||| || | |||  ||| |||||| || |||  ||||||| |||||||||  ||| |||||||||||||||||    
T  18833290 acatcggaatgagagggttcctgaggccgtacaggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagat 18833389  T
Q  448 gcatct 453  Q
    ||||||    
T  18833390 gcatct 18833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 22529392 - 22529272
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| ||||||||||  ||| ||||||||||||| |||||||| || | | ||| | || |||||| ||||||  ||||||||||| |||||| ||| |    
T  22529392 tagacgaaccgaatcat-atccgaatgagagggatcctgaggtcatgtaagtatgggcctacatggttgaaggaaggcttataagaaatgtttggtacta 22529294  T
Q  432 cctatatcaacaagatgcatct 453  Q
     |||||| ||||||||||||||    
T  22529293 tctatataaacaagatgcatct 22529272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 29039172 - 29039057
Alignment:
Q  337 aaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaa-ggagtgcttataagaattgtttgataccaccta 435  Q
    ||||||||||| ||||||||||||||| || |||||| |||| |   ||| |||| |||||| ||| |||| ||||| |||||||||||| ||| |||||    
T  29039172 aaaccgaatca-catcggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaatggag-gcttacaagaattgtttggtactaccta 29039075  T
Q  436 tatcaacaagatgcatct 453  Q
    ||||||||| ||||||||    
T  29039074 tatcaacaacatgcatct 29039057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 451
Target Start/End: Complemental strand, 35527278 - 35527160
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || || |||||||||||| | |||||||||||   ||| ||||   |||| ||| ||  |||||||||||||||||| | | |    
T  35527278 tagacgaaccgaatca-caccgaaatgagagggatcccgaggtcgtgcaaatatgggactggttggttgaaagaaggcttataagaattgtttggtgcta 35527180  T
Q  432 cctatatcaacaagatgcat 451  Q
    ||||||||||||||||||||    
T  35527179 cctatatcaacaagatgcat 35527160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 451
Target Start/End: Complemental strand, 26421386 - 26421344
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  26421386 cttataagaattgcttgatactacctatatcaacaagatgcat 26421344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 444
Target Start/End: Complemental strand, 26957708 - 26957603
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||||||  |||||  ||| | | |||  ||| |||||| ||| ||  |||||||||||||||||| ||| |||||||    
T  26957708 aaccgaatca-catcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctata 26957610  T
Q  438 tcaacaa 444  Q
    |||||||    
T  26957609 tcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 2465968 - 2466033
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| ||||||  |||||||||| ||||||| ||| ||||||||||||||| |||||||    
T  2465968 gactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatct 2466033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 43233478 - 43233522
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||    
T  43233478 cttataagaattgtttggtactatctatatcaacaagatgcatct 43233522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 13124838 - 13124769
Alignment:
Q  353 ggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgt 422  Q
    ||||||||||||||  ||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||    
T  13124838 ggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgt 13124769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 26421882 - 26421797
Alignment:
Q  368 ctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||| |||||||| |||||||| |||||| |||| |  ||| |||||||||||| | |||  |||||| |||||||||| ||||    
T  26421882 ctgaggccgtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatct 26421797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 16811952 - 16811912
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgttt 424  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  16811952 atgagactacatggttgaaggaatgcttataagaattgttt 16811912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 3e-95; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 95 - 302
Target Start/End: Complemental strand, 13614312 - 13614105
Alignment:
Q  95 agtttttacggttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttcaaatgcaggggaatattttcaacgtgcta 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  13614312 agtttttacggttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttcaaatgca-gggaatattttcaacctgcta 13614214  T
Q  195 ctcaagctgattgtgaaatcttgattcactcagtatgccaagcccg-agtgggagaaccatcacgacaaagatagagcatcggtcaatataacacccaag 293  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13614213 ctcaagctgattgtgaaatcttgattcactcagtatgccaagctcgcagtgggagaaacatcacgacaaaaatagagcatcggtcaatataacacccaag 13614114  T
Q  294 ctgatgagg 302  Q
    |||||||||    
T  13614113 ctgatgagg 13614105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 453
Target Start/End: Complemental strand, 13614077 - 13613928
Alignment:
Q  305 catgataatgagtggtacctgacaactt--agacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaa 402  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||  || |||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  13614077 catgataatgagtggtacctgacaacttttagataaaccgaatcacaat-ggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaa 13613979  T
Q  403 ggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13613978 ggagtacttataagaattgtttgataccacctatatcaacaagatgcatct 13613928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 13614988 - 13614905
Alignment:
Q  20 ttctcgttatggagtgatttttcaggctttagctgagttctttggaaccctttactgtttattcgaaatatgcagagtttttac 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13614988 ttctcgttatggagtgatttttcaggcttaagctgagttctttggaaccctttactgtttattcgaaatatgcagagtttttac 13614905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 9424009 - 9423889
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || ||||||||||||||| ||||||||||||||| ||| |||| |||||| ||| ||  |||||||| ||||||||| ||| |    
T  9424009 tagacgaaccgaatca-caccggaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtacta 9423911  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  9423910 cctatatcaacaagatgcatct 9423889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 4128025 - 4127920
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| | || | ||||||||||  ||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  4128025 acatcggaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 4127926  T
Q  448 gcatct 453  Q
    ||||||    
T  4127925 gcatct 4127920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 50398689 - 50398569
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| |||||||||||||||||| |||||| |||| | | ||  |||| |||||| ||||||  |||||||||||||||||| ||| |    
T  50398689 tagacaagccgaatca-catcggaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtacta 50398591  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  50398590 cctatatcaacaagatgcatct 50398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 12692144 - 12692030
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  12692144 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 12692046  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  12692045 tcaacaagatgcatct 12692030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 24629578 - 24629464
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | ||||||||||| | | ||| |||| ||||||  ||||| ||||||||||||||||||| ||| |||||||    
T  24629578 aaccgaatca-caccggaatgagagggttcctgaggtcgtgtaggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctata 24629480  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  24629479 tcaacaagatgcatct 24629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 35871632 - 35871735
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| ||| || | ||| |||| |||||| ||||||  ||||||| |||||||||| |||||||||||||||||||||    
T  35871632 acatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaacaagat 35871731  T
Q  448 gcat 451  Q
    ||||    
T  35871732 gcat 35871735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 14351784 - 14351904
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||||| ||||| || |||||| ||||||  |||| ||||| || |||| ||| |    
T  14351784 tagacaaaccgaatca-caccagaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtacta 14351882  T
Q  432 cctatatcaacaagatgcatct 453  Q
     |||||||||||||||||||||    
T  14351883 tctatatcaacaagatgcatct 14351904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 31817988 - 31817883
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||| ||||||||| ||||||| |||||| ||| |||| |||||| ||||||  |||||||||||||||| | ||| ||||||| |||||||||    
T  31817988 acatcggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaacaagat 31817889  T
Q  448 gcatct 453  Q
    ||||||    
T  31817888 gcatct 31817883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 50399144 - 50399024
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| |||||||||||||||||| |||||  |||| | | |||||| | |||||| ||||||  |||||||||||||||||| ||| |    
T  50399144 tagacaagccgaatca-catcggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtacta 50399046  T
Q  432 cctatatcaacaagatgcatct 453  Q
    |||||||||||| |||||||||    
T  50399045 cctatatcaacacgatgcatct 50399024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 23942934 - 23942820
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| ||| || |||| | | |||  ||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  23942934 aaccgaatca-catcggaatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctata 23942836  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  23942835 tcaacaagatgcatct 23942820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 29628812 - 29628703
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||| |||||||||||| |||||| |||| | | |||||||| |||||| ||||||   ||||||||||||||||| ||| |||||||    
T  29628812 aaccgaatca-catcgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctata 29628714  T
Q  438 tcaacaagatg 448  Q
    |||||||||||    
T  29628713 tcaacaagatg 29628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 14572286 - 14572181
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| | || | | ||| |||| |||||| |||||   |||||||||||||||||| ||| |||||||||||||||||    
T  14572286 acatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagat 14572187  T
Q  448 gcatct 453  Q
    ||||||    
T  14572186 gcatct 14572181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 44471461 - 44471356
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| |||  ||||| ||| || | |||||||| |||||| ||||||   ||||||||||||||||| ||| |||||||||||||||||    
T  44471461 acatcggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 44471362  T
Q  448 gcatct 453  Q
    ||||||    
T  44471361 gcatct 44471356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 49998640 - 49998745
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| || |||  ||| | ||||| |||| |||||| ||||||   ||||||||||||||||| ||| |||||||||||||||||    
T  49998640 acatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 49998739  T
Q  448 gcatct 453  Q
    ||||||    
T  49998740 gcatct 49998745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 4127582 - 4127468
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| |||||| | || | | ||| |||| ||| || ||||||   ||||||||||||||||| ||| |||||||    
T  4127582 aaccgaatca-catcggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctata 4127484  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  4127483 tcaacaagatgcatct 4127468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 21220476 - 21220362
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||| |||||||||||||  ||||| | || | | |||| |||  ||||| |||||| ||||||||||||||||||| ||| |||||||    
T  21220476 aaccgaatca-catcagaatgagagggatcatgaggccatgtaggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctata 21220378  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  21220377 tcaacaagatgcatct 21220362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 21067290 - 21067391
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| | ||||||||||||| |||||||| |||||| ||||||   || |||| |||| |||| ||| || ||||||||||||||||||    
T  21067290 cggaatgagagggatcccgaggtcgtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcat 21067389  T
Q  452 ct 453  Q
    ||    
T  21067390 ct 21067391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 31817534 - 31817429
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||| ||| ||||||||  |||||||||||||| |||||||| |||||| ||||||  | |||||| ||||||||| ||| ||||||| |||||| ||    
T  31817534 acatcgaaataagagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaat 31817435  T
Q  448 gcatct 453  Q
    ||||||    
T  31817434 gcatct 31817429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 51331432 - 51331312
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| ||||||||||||||| ||  ||||| |||| | | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |    
T  51331432 tagacaagccgaatca-catcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtacta 51331334  T
Q  432 cctatatcaacaagatgcatct 453  Q
     ||||||||||||||| |||||    
T  51331333 tctatatcaacaagatacatct 51331312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 1645894 - 1645780
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||| ||  ||||| |||| | | ||| |||| |||||| ||||||   ||||||||||||||||| ||  |||||||    
T  1645894 aaccgaatca-catcggaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctata 1645796  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  1645795 tcaacaagatgcatct 1645780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 3169201 - 3169315
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||| ||  ||||| |||| | | ||| |||| |||||| ||||||   ||||||| ||||||||| ||| |||||||    
T  3169201 aaccgaatca-catcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctata 3169299  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  3169300 tcaacaagatgcatct 3169315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 8467936 - 8467831
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| |||||| |||||| |||||   ||||| | |||||||| |||||| ||||||   ||||||||||||||||| ||| ||||||| |||||||||    
T  8467936 acatcagaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagat 8467837  T
Q  448 gcatct 453  Q
    ||||||    
T  8467836 gcatct 8467831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 14571817 - 14571752
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| |||||  ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  14571817 gacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatct 14571752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 23350419 - 23350314
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| |||  ||||| ||| || | | | |||| |||||| ||||||  |||||||||||||||||| |||  ||||||||||||||||    
T  23350419 acatcggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagat 23350320  T
Q  448 gcatct 453  Q
    ||||||    
T  23350319 gcatct 23350314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 27026567 - 27026612
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  27026567 gcttataagaattgtttgatactacctatatcaacaagatgcatct 27026612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 24629125 - 24629008
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagt---gcttataagaattgtttgataccacct 434  Q
    |||||||||| || ||||||||||||| | |||||| |||| | | ||| |||| ||||||  ||||| |   |||||||||||||||||| ||| ||||    
T  24629125 aaccgaatca-caccggaatgagagggttcctgaggccgtgtaggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacct 24629027  T
Q  435 atatcaacaagatgcatct 453  Q
    |||||||||||||||||||    
T  24629026 atatcaacaagatgcatct 24629008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 53391927 - 53391990
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||| |||||| |||| | ||||||||| ||||||||||||||| |||||||||||||||    
T  53391927 atgagactgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagat 53391990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 53996260 - 53996146
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||| |||| ||||||   || |   ||| |||| |||||| |||||| ||||||||| ||||||||| ||| |||||||    
T  53996260 aaccgaatca-catcggaatgagaaggatcctgaggctatgtagatatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctata 53996162  T
Q  438 tcaacaagatgcatct 453  Q
    |||||||||| |||||    
T  53996161 tcaacaagattcatct 53996146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 44470950 - 44470905
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  44470950 gcttataagaattgtttggtactacctatatcaacaagatgcatct 44470905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 1464212 - 1464256
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  1464212 cttataagaattgtttggtactacctatatcaacaagatgcatct 1464256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 7678713 - 7678653
Alignment:
Q  393 catggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||||    
T  7678713 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 7678653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 4185709 - 4185824
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    ||||||||  |||||  |||||||||| |  ||||| | |||| | |||||||  ||||||  ||||| | | |||||||||||||||||||||| ||||    
T  4185709 aaccgaattcacatcaaaatgagagggttcatgaggccatgcaggtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatata 4185808  T
Q  438 tcaacaagatgcatct 453  Q
     |||||||||||||||    
T  4185809 ccaacaagatgcatct 4185824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 453
Target Start/End: Complemental strand, 43929116 - 43928994
Alignment:
Q  331 ttagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacc 430  Q
    |||| ||||||||||| || | | |||||||||| | |||| | |||||| | ||||||||   |||| ||||||  ||||| |||||||||||| |||     
T  43929116 ttaggcaaaccgaatccactttgaaatgagagggttcctgaagccgtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtact 43929017  T
Q  431 acctatatcaacaagatgcatct 453  Q
    || |||| |||||||||||||||    
T  43929016 acatataccaacaagatgcatct 43928994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 449
Target Start/End: Original strand, 17028878 - 17028979
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||| | | |||||| ||| |||| ||| || |||||||   || ||||||||||| | | | |||||||||||||||||    
T  17028878 acatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaacaagat 17028977  T
Q  448 gc 449  Q
    ||    
T  17028978 gc 17028979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 17628575 - 17628620
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||    
T  17628575 gcttataagaattgtttggtactacctataccaacaagatgcatct 17628620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 20306237 - 20306192
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||    
T  20306237 gcttataagaattgtttggtactatctatatcaacaagatgcatct 20306192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 41869922 - 41870027
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||| |||||||||| |||||   || |||  ||| |||| |||| | ||||||   |||||||||||||| |||||| ||||||||||||||||     
T  41869922 acatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaacaagac 41870021  T
Q  448 gcatct 453  Q
    ||||||    
T  41870022 gcatct 41870027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 17029334 - 17029437
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||   ||||||||||| | ||| |||| ||| || ||| ||   ||| ||| ||||||||  ||| |||||||||||||||||    
T  17029334 acatcggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaacaagat 17029433  T
Q  448 gcat 451  Q
    ||||    
T  17029434 gcat 17029437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 453
Target Start/End: Complemental strand, 50814899 - 50814856
Alignment:
Q  410 ttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||| ||| | |||||||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatct 50814856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 447
Target Start/End: Original strand, 21067760 - 21067837
Alignment:
Q  370 gaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| |||||| | ||| |||| |||||| ||||||   ||||||||||||||||| | | |||||||||||||||||    
T  21067760 gaggccgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagat 21067837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 27029342 - 27029386
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||| |||| ||| || ||||||||||||||||||||    
T  27029342 cttataagaattatttggtactacttatatcaacaagatgcatct 27029386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 407 - 451
Target Start/End: Original strand, 34554492 - 34554536
Alignment:
Q  407 tgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    |||||||||||||||||||| || ||||||| || ||||||||||    
T  34554492 tgcttataagaattgtttgacactacctataccagcaagatgcat 34554536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 3886743 - 3886638
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||||||| || | ||| |||| ||||||||||||| |||||||| |||||||||| ||| |||||||||||||||||    
T  3886743 acatcggaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagat 3886644  T
Q  448 gcatct 453  Q
    ||||||    
T  3886643 gcatct 3886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 2473963 - 2474068
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| || ||||||| || |||||||||| |||||| ||||||  |||||||||||||||||| |||  ||||||||||||||||    
T  2473963 acatcggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagat 2474062  T
Q  448 gcatct 453  Q
    ||||||    
T  2474063 gcatct 2474068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 10927097 - 10926983
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||| ||||||||||||| ||||||||||| | | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  10927097 aaccgaatca-catcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctata 10926999  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  10926998 tcaacaagatgcatct 10926983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 10927554 - 10927440
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||||||  ||||| |||| | | |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  10927554 aaccgaatca-catcggaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctata 10927456  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  10927455 tcaacaagatgcatct 10927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 17445606 - 17445492
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||| |||||||||||| |||||| |||| | ||||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  17445606 aaccgaatca-catcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctata 17445508  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  17445507 tcaacaagatgcatct 17445492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 189072 - 189177
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| ||| |||| ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  189072 acatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 189171  T
Q  448 gcatct 453  Q
    | ||||    
T  189172 gtatct 189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 1821910 - 1822015
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| |||  | |||||||||| | |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  1821910 acatcggaatgagagagatcttaaggtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 1822009  T
Q  448 gcatct 453  Q
    ||||||    
T  1822010 gcatct 1822015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 34867785 - 34867899
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  34867785 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 34867883  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  34867884 tcaacaagatgcatct 34867899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 22556540 - 22556645
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  ||||||| |||||||||| ||| |||||||||||||||||    
T  22556540 acatcggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagat 22556639  T
Q  448 gcatct 453  Q
    ||||||    
T  22556640 gcatct 22556645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 8391473 - 8391359
Alignment:
Q  337 aaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctat 436  Q
    ||||||||||| ||||||||||||||||||||||||| |||| | |||||||||| |||| | ||||||   ||||||||||||||||| || | ||| |    
T  8391473 aaaccgaatca-catcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggta-ctcctgt 8391376  T
Q  437 atcaacaagatgcatct 453  Q
    |||||||||||||||||    
T  8391375 atcaacaagatgcatct 8391359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 451
Target Start/End: Complemental strand, 20039631 - 20039513
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    |||||||||||||||| ||||||||||||||||||  ||||| |||| | | ||  |||| ||| || ||||||  |||||||||||||||||| ||| |    
T  20039631 tagacaaaccgaatca-catcggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtacta 20039533  T
Q  432 cctatatcaacaagatgcat 451  Q
    ||||||||||||||||||||    
T  20039532 cctatatcaacaagatgcat 20039513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 21886297 - 21886183
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | ||||||| ||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| || ||||    
T  21886297 aaccgaatca-caccggaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatata 21886199  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  21886198 tcaacaagatgcatct 21886183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 8642176 - 8642071
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||||||| || ||| |||||| | ||| |||| |||||| ||||||  ||||||||||||| |||| ||| |||||||||||||||||    
T  8642176 acatcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 8642077  T
Q  448 gcatct 453  Q
    ||||||    
T  8642076 gcatct 8642071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 27646986 - 27646872
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| ||  || |||| | | ||| | || |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  27646986 aaccgaatca-catcggaatgagagggatcctagggccgtgtaggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctata 27646888  T
Q  438 tcaacaagatgcatct 453  Q
     |||||||||||||||    
T  27646887 acaacaagatgcatct 27646872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 42788797 - 42788683
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||||| |||||| |||| | |  || |||| |||||| ||| ||   ||||||||||||||||| ||| |||||||    
T  42788797 aaccgaatca-caacggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaagaagacttataagaattgtttggtactacctata 42788699  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  42788698 tcaacaagatgcatct 42788683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 2193824 - 2193925
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    |||||||||||||||  ||||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  2193824 cggaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 2193923  T
Q  452 ct 453  Q
    ||    
T  2193924 ct 2193925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 2474409 - 2474514
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| ||| || ||||||| ||   ||| |||| |||||| ||||||   |||| |||||||||||| ||| |||||||||||||||||    
T  2474409 acatcggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagat 2474508  T
Q  448 gcatct 453  Q
    ||||||    
T  2474509 gcatct 2474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 3887199 - 3887094
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| ||| |||||| ||| || | ||| |||| |||||| ||||||   |||||| ||||| |||| ||| |||||||||||||||||    
T  3887199 acatcggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaacaagat 3887100  T
Q  448 gcatct 453  Q
    ||||||    
T  3887099 gcatct 3887094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 22556973 - 22557078
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| | |  ||||| |||||| | ||| |||| |||||| ||||||  ||||||| |||||||||| ||| ||| |||||||||||||    
T  22556973 acatcggaatgagagagttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagat 22557072  T
Q  448 gcatct 453  Q
    ||||||    
T  22557073 gcatct 22557078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 34371656 - 34371721
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| |||||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  34371656 gactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatct 34371721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 34372112 - 34372177
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| |||||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  34372112 gactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatct 34372177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 30719957 - 30719842
Alignment:
Q  337 aaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctat 436  Q
    ||||||||||| |||| ||||||||||||| ||||||| ||||| | ||| |||  ||| || ||||||  ||||||| |||||||||| ||| ||||||    
T  30719957 aaaccgaatca-catcagaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctat 30719859  T
Q  437 atcaacaagatgcatct 453  Q
    |  ||||||||||||||    
T  30719858 aaaaacaagatgcatct 30719842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 39146943 - 39147048
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||| ||||||||||||  ||||| |||| | | ||| |||| |||||| |||||    ||||||||||||||||||||| || ||||| ||||||||    
T  39146943 acatcgaaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagat 39147042  T
Q  448 gcatct 453  Q
    ||||||    
T  39147043 gcatct 39147048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 22975152 - 22975076
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgttt 424  Q
    ||||||||||||||||||| |||||| |||||| | ||| |||| |||||| |||| |  |||||||||||||||||    
T  22975152 acatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 451
Target Start/End: Complemental strand, 11160822 - 11160720
Alignment:
Q  349 catcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatg 448  Q
    ||||||||||||||||||  ||| |||||| | | |||| ||| ||| || ||||||  |||||||| ||||||||| ||| | |||| |||||||||||    
T  11160822 catcggaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatg 11160723  T
Q  449 cat 451  Q
    |||    
T  11160722 cat 11160720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 450
Target Start/End: Complemental strand, 2058808 - 2058696
Alignment:
Q  337 aaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctat 436  Q
    ||||||||||| ||||||| |||||| ||| |||| ||| ||||   ||||||||  ||| | ||||||   |||||| |||||||||| ||| ||||||    
T  2058808 aaaccgaatca-catcggattgagagagatcctgaagtcatgcagctatgagactggatgattgaaggaagacttatatgaattgtttggtactacctat 2058710  T
Q  437 atcaacaagatgca 450  Q
    ||||||||||||||    
T  2058709 atcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 451
Target Start/End: Complemental strand, 5067048 - 5066930
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    |||||||| ||||||| || | ||||||||| ||| | |||| |||||||| ||||||||  ||| |  |||||   ||||||||||||||||| ||  |    
T  5067048 tagacaaatcgaatca-caccagaatgagagagatcccgaggccgtgcatgtatgagactgtatgattaaaggaaaacttataagaattgtttggtatta 5066950  T
Q  432 cctatatcaacaagatgcat 451  Q
     |||||||||||||||||||    
T  5066949 tctatatcaacaagatgcat 5066930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 451
Target Start/End: Original strand, 18304439 - 18304538
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    |||||||||| |||| ||||||||||| | | ||| |||| |||||  || | |  |||||||  ||||||||| ||| |||||||||||||||||||||    
T  18304439 cggaatgagaaggatcctgaggtcgtgtaggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcat 18304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 24182381 - 24182282
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||  ||||  |||||| | |||||||   ||||| ||||||  ||||||||||||| |||| ||| | ||||| |||||||||||||||    
T  24182381 gaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatct 24182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 42429194 - 42429252
Alignment:
Q  393 catggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    |||||| |||||||  ||||||||||||||||| ||| |||| ||||||||| ||||||    
T  42429194 catggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcat 42429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 35761056 - 35760951
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||||| | |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  35761056 acatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 35760957  T
Q  448 gcatct 453  Q
    ||||||    
T  35760956 gcatct 35760951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 20061333 - 20061228
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||||||| ||||||||||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  20061333 acatcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 20061234  T
Q  448 gcatct 453  Q
    ||||||    
T  20061233 gcatct 20061228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 30873107 - 30872987
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || |||||||||||||||||||||| |||||| | ||||||||  ||||| ||||||   ||| ||||||||||||||||| |    
T  30873107 tagacgaaccgaatca-caccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatacta 30873009  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  30873008 cctatatcaacaagatgcatct 30872987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 35759750 - 35759645
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  35759750 acatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 35759651  T
Q  448 gcatct 453  Q
    ||||||    
T  35759650 gcatct 35759645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 7584230 - 7584410
Alignment:
Q  105 gttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttcaaatgcaggggaatattttcaacgtgctactcaag---- 200  Q
    |||||||||||||| ||| |||||||||| |||||||  ||||||| |||||||||||||||||| ||| ||||||||||||  ||||||||||||        
T  7584230 gttcttctcagatgctgatttctaatttttgacatttgctgatagtataagggggagcttcaaatacagaggaatattttcattgtgctactcaagataa 7584329  T
Q  201 -----ctgattgtgaaatcttgattcactcagtatgccaagcccgagtgggagaaccatcacgacaaagatagagcatcggtcaa 280  Q
          |||| ||||||| |||||||||    ||||| |||| |||||||||||||| ||||| || ||||||||||| ||||||    
T  7584330 tcctaatgatggtgaaatattgattcac----tatgcgaagctcgagtgggagaaccgtcacggcagagatagagcattggtcaa 7584410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 43057674 - 43057560
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| |||||| |||| | | |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  43057674 aaccgaatca-catcggaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctata 43057576  T
Q  438 tcaacaagatgcatct 453  Q
    | ||||||||||||||    
T  43057575 ttaacaagatgcatct 43057560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 50002849 - 50002744
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| ||| |||||| |||| | ||||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  50002849 acatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 50002750  T
Q  448 gcatct 453  Q
    ||||||    
T  50002749 gcatct 50002744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20054231 - 20054117
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20054231 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20054133  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20054132 tcaacaagatgcatct 20054117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20054687 - 20054573
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20054687 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20054589  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20054588 tcaacaagatgcatct 20054573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20055143 - 20055029
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20055143 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20055045  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20055044 tcaacaagatgcatct 20055029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20055599 - 20055485
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20055599 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20055501  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20055500 tcaacaagatgcatct 20055485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20056055 - 20055941
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20056055 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20055957  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20055956 tcaacaagatgcatct 20055941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20056511 - 20056397
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20056511 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20056413  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20056412 tcaacaagatgcatct 20056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20057414 - 20057300
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20057414 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20057316  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20057315 tcaacaagatgcatct 20057300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 20845812 - 20845698
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || |||||||||| || | |||||| |||||| | |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  20845812 aaccgaatca-caccggaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctata 20845714  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20845713 tcaacaagatgcatct 20845698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 50002436 - 50002322
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||||||  ||||| |||| | ||||| |||| |||||| ||||||  |||||||||||||||||| ||| |||| ||    
T  50002436 aaccgaatca-catcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactaccttta 50002338  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  50002337 tcaacaagatgcatct 50002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 38340901 - 38341015
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || |||||||||| || | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  38340901 aaccgaatca-caccggaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 38340999  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  38341000 tcaacaagatgcatct 38341015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 46693878 - 46693772
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactcc-atggtagaaggagtgcttataagaattgtttgataccacctatatcaacaaga 446  Q
    ||||||||||||||||||| || |||||||||||| ||| ||||   ||||| ||||||  |||||||| ||||||||| ||| ||||||||||||||||    
T  46693878 acatcggaatgagagggatcctaaggtcgtgcatgtatgggactgtgatggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaaga 46693779  T
Q  447 tgcatct 453  Q
    |||||||    
T  46693778 tgcatct 46693772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 453
Target Start/End: Complemental strand, 20057854 - 20057756
Alignment:
Q  355 aatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||| | |||||| |||||| | ||| |||| |||||| ||| ||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  20057854 aatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20057756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 2634928 - 2635033
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||  |||||| ||||| | ||| |||| |||||| ||||||   || |||||||||||||| ||| ||||||| |||||||||    
T  2634928 acatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaacaagat 2635027  T
Q  448 gcatct 453  Q
    ||||||    
T  2635028 gcatct 2635033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 16452075 - 16451970
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| | || | | | | |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||    
T  16452075 acatcggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagat 16451976  T
Q  448 gcatct 453  Q
    ||||||    
T  16451975 gcatct 16451970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 16461228 - 16461123
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| | || | | | | |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||    
T  16461228 acatcggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagat 16461129  T
Q  448 gcatct 453  Q
    ||||||    
T  16461128 gcatct 16461123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 7097084 - 7096886
Alignment:
Q  100 ttacggttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttca-------aatgcaggggaatattttcaacgtgc 192  Q
    |||| |||||||||||||| ||||||||| |||| |||||||  ||||||||||||||||||||  |       | ||||| ||||||||| ||  ||||    
T  7097084 ttacagttcttctcagatgctgacttctagttttcgacatttgctgatagtgtaagggggagctcaaggtgcagactgcagaggaatatttacattgtgc 7096985  T
Q  193 tactcaagctgatt---------gtgaaatcttgattc-actcagtatgccaagcccgagtgggagaaccatcacgacaaagatagagcatcggtcaat 281  Q
    || |||||||||||         |||||||| |||||  | ||| ||||  |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  7096984 tattcaagctgattctaatgatggtgaaatcgtgatttgattcactatgtgaagcccgagtgggagaaccatcacgacagagatagagcatcagtcaat 7096886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 451
Target Start/End: Original strand, 12883513 - 12883631
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || |||||||||| |||| | ||||  ||||| | ||| |||| |||| | |||||| | ||||||||||||||||| ||| |    
T  12883513 tagacgaaccgaatca-caccggaatgagatggatcccgaggctgtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtacta 12883611  T
Q  432 cctatatcaacaagatgcat 451  Q
    ||||||||||||||||||||    
T  12883612 cctatatcaacaagatgcat 12883631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 43057215 - 43057102
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||| ||||||| ||||| || ||| |||| | | ||| |||| |||||| ||||||  ||||| |||||||||||||||| |||||||    
T  43057215 aaccgaatca-catcagaatgag-gggatcctaaggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctata 43057118  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  43057117 tcaacaagatgcatct 43057102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 52250201 - 52250315
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || |||||||||||||||  ||||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||    
T  52250201 aaccgaatca-caccggaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctata 52250299  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  52250300 tcaacaagatgcatct 52250315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 2328319 - 2328424
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| ||||||||||  ||| ||||| ||| || | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||| ||||||||    
T  2328319 acattggaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagat 2328418  T
Q  448 gcatct 453  Q
    ||||||    
T  2328419 gcatct 2328424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 7583699 - 7583753
Alignment:
Q  19 attctcgttatggagtgatttttc-aggctttagctgagttctttggaacccttt 72  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  7583699 attctcattatggagtgatttttccaggttttagctgagttctttggaacccttt 7583753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 453
Target Start/End: Original strand, 16907245 - 16907343
Alignment:
Q  355 aatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||| ||||   ||||| | |||| ||| |||||| ||| ||  |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  16907245 aatgagagggattttgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatct 16907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 20060422 - 20060377
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  20060422 gcttataagaattgtttggtactacctatatcaacaagatgcatct 20060377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 7097717 - 7097665
Alignment:
Q  20 ttctcgttatggagtgatttttcaggctttagctgagttctttggaacccttt 72  Q
    ||||| ||||| | ||||||||||||||||||||||| |||||||||||||||    
T  7097717 ttctcattatgtactgatttttcaggctttagctgagctctttggaacccttt 7097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 10820587 - 10820701
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||| ||||||||||| |||||  ||| ||| ||  |||| |||||| ||||||    |||||||||||||||| ||| |||||||    
T  10820587 aaccgaatca-catcggagtgagagggattatgaggcggtgtatgtattggactacatggttgaaggaagatttataagaattgtttggtactacctata 10820685  T
Q  438 tcaacaagatgcatct 453  Q
    |||| ||||| |||||    
T  10820686 tcaataagatacatct 10820701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 50003226 - 50003112
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| |||||| | |||| | ||  |||| ||||||  ||||    ||||||| ||||||| | ||| |||||||    
T  50003226 aaccgaatca-catcggaatgagagggatcctgaggccatgcaggtataggactgcatggttaaagggagacttataataattgttgggtactacctata 50003128  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  50003127 tcaacaagatgcatct 50003112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 7548070 - 7548198
Alignment:
Q  322 cctgacaacttagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattg 421  Q
    ||||||||||| ||||||| |||||| ||| | ||||||||||||  ||||| |||| | | |||||||| |||| |  |||||   ||||||| |||||    
T  7548070 cctgacaacttcgacaaactgaatca-cattgcaatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattg 7548168  T
Q  422 tttgataccacctatatcaacaagatgcat 451  Q
    |||| ||  | |||||||||||||||||||    
T  7548169 tttggtattaactatatcaacaagatgcat 7548198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 20056898 - 20056853
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  20056898 gcttatgagaattgtttggtactacctatatcaacaagatgcatct 20056853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 23180734 - 23180839
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| ||||||||||||||  ||| | |||| | | ||| |||| | |||| |||||| || |||||||||||| ||| ||| |||||||||||||||||    
T  23180734 acattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaacaagat 23180833  T
Q  448 gcatct 453  Q
    | ||||    
T  23180834 gtatct 23180839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 31822805 - 31822700
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| |||||||||||||  ||||| |||| | | |||||||| |||||| ||||||    ||||||||||| |||| ||| || ||||||||||| ||    
T  31822805 acatcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatat 31822706  T
Q  448 gcatct 453  Q
    ||||||    
T  31822705 gcatct 31822700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 204
Target Start/End: Original strand, 32492226 - 32492326
Alignment:
Q  105 gttcttctcagatgttgacttctaattttagacatttattgatagtgtaagggggagcttcaa-atgcaggggaatattttcaacgtgctactcaagctg 203  Q
    |||||| ||||||| |||| |||||||||   ||| || |||||| ||||||||||||||||| |||||| ||| || ||||| || ||||||| |||||    
T  32492226 gttcttatcagatgctgacgtctaattttcatcatctactgatagggtaagggggagcttcaagatgcagaggagtactttcatcgggctactctagctg 32492325  T
Q  204 a 204  Q
    |    
T  32492326 a 32492326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 453
Target Start/End: Complemental strand, 51372970 - 51372911
Alignment:
Q  394 atggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||| ||||||  |||||||||||||||||  ||| ||||||||| |||||||||||||    
T  51372970 atggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatct 51372911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 7097630 - 7097597
Alignment:
Q  70 tttactgtttattcgaaatatgcagagtttttac 103  Q
    ||||||| ||||||||||||||||||||||||||    
T  7097630 tttactggttattcgaaatatgcagagtttttac 7097597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 16410877 - 16410760
Alignment:
Q  336 caaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccaccta 435  Q
    |||||| ||| ||| || ||||||||||||||||||| |||||   | ||| || | ||| || ||||||  ||||||||||||| |||  ||| ||| |    
T  16410877 caaaccaaattaacttcagaatgagagggattctgagatcgtgtgagtatgggaatgcattgttgaaggaaagcttataagaattatttactactaccaa 16410778  T
Q  436 tatcaacaagatgcatct 453  Q
    || |||||||||||||||    
T  16410777 taccaacaagatgcatct 16410760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 453
Target Start/End: Original strand, 33174918 - 33175067
Alignment:
Q  305 catgataatgagtggtacctgacaactt--agacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaa 402  Q
    ||||| |||||||||  || ||||||||  |||||| |||||||| |||||||||||||||||| |||||| |||| | | ||| |||| |||||| |||    
T  33174918 catgacaatgagtggctcccgacaacttctagacaagccgaatca-catcggaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaa 33175016  T
Q  403 ggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  33175017 ggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33175067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 18099029 - 18098915
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||| || |||||| |||| | | |||||||| |||||| |||||  ||||||||||||||||||| ||| |||||||    
T  18099029 aaccgaatca-catcggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctata 18098931  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  18098930 tcaacaagatgcatct 18098915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 16378945 - 16379046
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||||| |||| |||||| | |||||||| |||||| ||||||   |||||| |||||||||||||| |||||||||||||||||||||    
T  16378945 cggaatgagagggattccgaggccgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcat 16379044  T
Q  452 ct 453  Q
    ||    
T  16379045 ct 16379046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 24818330 - 24818435
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||||||| ||| |||| ||||||  |||||  |||||||||||||||||  ||| |||||||||||||||||    
T  24818330 acatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagat 24818429  T
Q  448 gcatct 453  Q
    ||||||    
T  24818430 gcatct 24818435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 453
Target Start/End: Original strand, 1953149 - 1953264
Alignment:
Q  337 aaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctat 436  Q
    ||||||||||| |||||||||||||||||| |||| |||||||| | |||||||| |||||| ||||||   | ||||||||||||||| ||| ||||||    
T  1953149 aaaccgaatca-catcggaatgagagggatcctgaagtcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctat 1953247  T
Q  437 atcaacaagatgcatct 453  Q
    |||||| ||||||||||    
T  1953248 atcaactagatgcatct 1953264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 453
Target Start/End: Original strand, 30966239 - 30966343
Alignment:
Q  349 catcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatg 448  Q
    |||||||||||||||||| |||||| ||| || | ||| |||| |||||| ||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  30966239 catcggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatg 30966338  T
Q  449 catct 453  Q
    |||||    
T  30966339 catct 30966343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 453
Target Start/End: Original strand, 30966695 - 30966799
Alignment:
Q  349 catcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatg 448  Q
    |||||||||||||||||| |||||| ||| |||| ||| |||| |||||| ||||||  | |||||||||||||||| ||| ||||||||||||||||||    
T  30966695 catcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatg 30966794  T
Q  449 catct 453  Q
    |||||    
T  30966795 catct 30966799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 25434207 - 25434093
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||||| |||||| |||||  | ||| |||| |||||| ||||||  |||||||||||||||||||||| |||| ||    
T  25434207 aaccgaatca-caccggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaaccttta 25434109  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  25434108 tcaacaagatgcatct 25434093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 25338135 - 25338034
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | ||||||||||||| | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  25338135 cggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 25338036  T
Q  452 ct 453  Q
    ||    
T  25338035 ct 25338034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 453
Target Start/End: Complemental strand, 27883061 - 27882963
Alignment:
Q  355 aatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||| |||||| |||||||| |||||||| ||| || |||||| ||||||||||||||||||| ||  | ||||||||| |||||||||||    
T  27883061 aatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatct 27882963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 38899098 - 38898951
Alignment:
Q  305 catgataatgagtggtacctgacaactt--agacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaa 402  Q
    ||||| |||||||||  || ||||||||  |||||| || ||||| |||||||| ||||| |||  ||||| |||| | | || ||||| |||||| |||    
T  38899098 catgaaaatgagtggctcccgacaacttctagacaagccaaatca-catcggaaggagagtgatcttgaggccgtgtaggtatcagactacatggttgaa 38899000  T
Q  403 ggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  38898999 ggagagcttataagaattgtttggtactacctatatcaacaagatgcat 38898951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 41754297 - 41754398
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| |  ||||| |||||| | |||||||| |||||| ||||||  |||||||||||||||||| ||| | |||||||||||||||||||    
T  41754297 cggaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcat 41754396  T
Q  452 ct 453  Q
    ||    
T  41754397 ct 41754398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 16379388 - 16379502
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    ||||||||||| || |||||||||||||| | |||| |||||| | ||| |||| |||||| ||||||   |||||| |||||||||| ||| |||||||    
T  16379388 aaccgaatcaa-attggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctata 16379486  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  16379487 tcaacaagatgcatct 16379502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 33174494 - 33174612
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| |||||||||||||||||| |||| | |||| | | ||| |||| ||  || ||||||  |||||||||||||||||| ||| |    
T  33174494 tagacgaaccgaatca-catcggaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaaggaaggcttataagaattgtttggtacta 33174590  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  33174591 cctatatcaacaagatgcatct 33174612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 5399959 - 5399854
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||  |||||||||||| | ||| || |  |||||  ||||   |||||||||||||||||| ||| |||||||||||||||||    
T  5399959 acatcggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaacaagat 5399860  T
Q  448 gcatct 453  Q
    ||||||    
T  5399859 gcatct 5399854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 29804686 - 29804791
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| | || | | ||| |||| |||||| |||||   |||||||||||||||| | ||| |||||||||||||||||    
T  29804686 acatcggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagat 29804785  T
Q  448 gcatct 453  Q
    ||||||    
T  29804786 gcatct 29804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 11388184 - 11388296
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||| || |||| | |||| | | |||||||| |||||| |||||| |||||| || ||||||||| ||| |||||||    
T  11388184 aaccgaatca-catcggaatgagagg-atcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctata 11388280  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  11388281 tcaacaagatgcatct 11388296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 453
Target Start/End: Original strand, 83028 - 83126
Alignment:
Q  355 aatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||| ||||| | ||||| | |||||||| |||||| |||||  ||||||||||||| ||||| ||| ||||||| |||||||||| ||||    
T  83028 aatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatct 83126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 1912529 - 1912634
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||||  || | | |||||||| |||||| ||| |     |||||||||||||||| ||| |||||||||||||||||    
T  1912529 acatcggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagat 1912628  T
Q  448 gcatct 453  Q
    ||||||    
T  1912629 gcatct 1912634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 15619902 - 15620007
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||||||| | || | |||||| | |||||||| ||| || |||||   |||||||||||||||||| ||| |||||||||||||||||    
T  15619902 acatcagaatgagagggatcccgatgccgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagat 15620001  T
Q  448 gcatct 453  Q
     |||||    
T  15620002 acatct 15620007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 29259762 - 29259657
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||  ||| || | ||| |||| |||||| ||||||  |||||| | ||||||||| ||| || ||||||||||||||    
T  29259762 acatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagat 29259663  T
Q  448 gcatct 453  Q
    ||||||    
T  29259662 gcatct 29259657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 1707037 - 1707150
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||||||| || |||||   ||| | | |||||||| |||| | ||||||   ||||||||||||||||| ||| |||||||    
T  1707037 aaccgaatca-catcggaatgagagg-atcctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctata 1707134  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  1707135 tcaacaagatgcatct 1707150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 18448069 - 18447955
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| ||||||||||| |||||| |||||| |||| | | ||| |||| |||||| |||| |   ||||||||||||||||| ||| || | ||    
T  18448069 aaccgaatca-catcggaatgatagggatcctgaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgta 18447971  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  18447970 tcaacaagatgcatct 18447955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 8256570 - 8256635
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||||    
T  8256570 gactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 8256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 11394575 - 11394643
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| |||||| |||||| |||||| || ||||||||| ||| |||||||||||||||||||||||    
T  11394575 atgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatct 11394643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 33771065 - 33771110
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  33771065 gcttataagaattgtttggtactacctatatcaacaagatgcatct 33771110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 449
Target Start/End: Original strand, 20502050 - 20502128
Alignment:
Q  371 aggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgc 449  Q
    |||||||||| | ||| |||| |||||| ||||||  |||||||||||||||||| |||   |||||||||||||||||    
T  20502050 aggtcgtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgc 20502128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 30963345 - 30963300
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||    
T  30963345 gcttataagaattgttaggtactacctatatcaacaagatgcatct 30963300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 8073957 - 8074001
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||    
T  8073957 cttataagaattgtttggtactacctataccaacaagatgcatct 8074001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 453
Target Start/End: Complemental strand, 30963857 - 30963757
Alignment:
Q  353 ggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatc 452  Q
    ||||||||||||||  ||| | |||||| | | |||| | |||||| ||||||   |||||||||||||| || | | ||||||||||||||||||||||    
T  30963857 ggaatgagagggatcatgaagccgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatc 30963758  T
Q  453 t 453  Q
    |    
T  30963757 t 30963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 13191039 - 13191083
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||||||| ||| || |||| |||||||||||||||    
T  13191039 cttataagaattgtttggtactacatataccaacaagatgcatct 13191083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 107605 - 107500
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||||||||| ||| || | ||| |||| |||||| ||||||  |||||||||||||||||||||| ||| |||||||||||||    
T  107605 acatcggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagat 107506  T
Q  448 gcatct 453  Q
    ||||||    
T  107505 gcatct 107500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 142416 - 142311
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||||| | ||| |||| |||||| |||||| || |||||||||||||||| ||| |||||||||||||||||    
T  142416 acatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagat 142317  T
Q  448 gcatct 453  Q
    ||||||    
T  142316 gcatct 142311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 20896845 - 20896725
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| |||||||||||||||||| || ||| |||| | | |||||||| |||||| ||||||  |||||||||||||||||| ||| |    
T  20896845 tagacaagccgaatca-catcggaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtacta 20896747  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  20896746 cctatatcaacaagatgcatct 20896725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 3652481 - 3652595
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| ||||||  ||| | | ||| |||| |||||| ||||||  ||||||||||||||| |||||| |||||||    
T  3652481 aaccgaatca-catcggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctata 3652579  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  3652580 tcaacaagatgcatct 3652595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 453
Target Start/End: Complemental strand, 20126368 - 20126219
Alignment:
Q  305 catgataatgagtggtacctgacaactt--agacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaa 402  Q
    ||||| |||||| ||  |||||||||||  |||||| | |||||| |||||||||||||||||| || |||  ||| | | |||||||| |||||| |||    
T  20126368 catgacaatgagcggctcctgacaacttctagacaagctgaatca-catcggaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaa 20126270  T
Q  403 ggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||  |||||||||||| ||||||||| |||||||||||||||||||||||    
T  20126269 ggaaggcttataagaatggtttgatactacctatatcaacaagatgcatct 20126219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 6331069 - 6330949
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| ||||||||||||| |||| |||||| |||| | | |||||||| |||||| ||||||   ||||||||||||||||| ||| |    
T  6331069 tagacaagccgaatca-catcggaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtacta 6330971  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||| ||||||||    
T  6330970 cctatatcaacaatatgcatct 6330949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 17027673 - 17027568
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| | |||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  17027673 acatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 17027574  T
Q  448 gcatct 453  Q
     |||||    
T  17027573 tcatct 17027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 31821849 - 31821729
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    |||| ||||||||||| ||||||||||||||||||  ||||| | || | | |||||||| |||||| |||||| |||||||||||||| |||| ||| |    
T  31821849 tagagaaaccgaatca-catcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtacta 31821751  T
Q  432 cctatatcaacaagatgcatct 453  Q
     |||||||||||||||||||||    
T  31821750 actatatcaacaagatgcatct 31821729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 13492795 - 13492898
Alignment:
Q  350 atcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgc 449  Q
    |||||||||||| |||| ||||||  ||||| | |||||||| |||||| ||||||  |||||||| ||||||||| ||| |||||||||||||||||||    
T  13492795 atcggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgc 13492894  T
Q  450 atct 453  Q
    ||||    
T  13492895 atct 13492898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 16519972 - 16520077
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| ||||||  ||| | | |||||||| |||||| ||||||  |||||| ||| ||||||| ||| |||||||||||||||||    
T  16519972 acatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaacaagat 16520071  T
Q  448 gcatct 453  Q
    ||||||    
T  16520072 gcatct 16520077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 20850316 - 20850430
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| |  ||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||  ||| |||||||    
T  20850316 aaccgaatca-caccggaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctata 20850414  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  20850415 tcaacaagatgcatct 20850430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 23986468 - 23986354
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||||||||||||| | |||| |||| | | ||| |||| |||||| |||||   |||||||||||||||||| ||| |||||||    
T  23986468 aaccgaatca-catcggaatgagagggatccggaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctata 23986370  T
Q  438 tcaacaagatgcatct 453  Q
    | ||||||||||||||    
T  23986369 tgaacaagatgcatct 23986354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 7911882 - 7911987
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||   |||| |||||| | ||  |||| |||||| ||||||   ||||||||||||||||| ||| |||||||||||||||||    
T  7911882 acatcggaatgagagggatctcgaggccgtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagat 7911981  T
Q  448 gcatct 453  Q
    ||||||    
T  7911982 gcatct 7911987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 17850907 - 17851027
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || ||||||||||||||| ||||||||||||| | ||| |||| ||||||  || || |||| ||||||  |||||| ||| |    
T  17850907 tagacgaaccgaatca-caccggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtacta 17851005  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||| ||||||||||||||||||    
T  17851006 cctttatcaacaagatgcatct 17851027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 27334169 - 27334270
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||| ||||||| | ||||||||||||| | |||  ||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||| ||    
T  27334169 cggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaat 27334268  T
Q  452 ct 453  Q
    ||    
T  27334269 ct 27334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 27394909 - 27395010
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||| ||||||| | ||||||||||||| | |||  ||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||| ||    
T  27394909 cggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaat 27395008  T
Q  452 ct 453  Q
    ||    
T  27395009 ct 27395010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 451
Target Start/End: Complemental strand, 9440459 - 9440348
Alignment:
Q  339 accgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatat 438  Q
    ||||||||| |||||||||||||||||| |||| |||||||| | |||  ||| |||||| ||| ||  |||||||||||||||| | ||| || |||||    
T  9440459 accgaatca-catcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatat 9440361  T
Q  439 caacaagatgcat 451  Q
    |||||||||||||    
T  9440360 caacaagatgcat 9440348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 7912314 - 7912417
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||   |||| |||||| | ||| |||| |||||| ||||||   |||||| |||||||||| ||| |||||||||||||||||    
T  7912314 acatcggaatgagagggatctcgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagat 7912413  T
Q  448 gcat 451  Q
    ||||    
T  7912414 gcat 7912417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 447
Target Start/End: Complemental strand, 17731255 - 17731156
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| ||| || | ||| |||| ||||||  |||||   ||||||||||||||||| ||| |||||||||||||||||    
T  17731255 acatcggaatgagagggatcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaacaagat 17731156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 453
Target Start/End: Original strand, 21311981 - 21312080
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||| |  |||||  ||||| | |||||||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||||    
T  21311981 gaatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatct 21312080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 446
Target Start/End: Complemental strand, 2720702 - 2720608
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaaga 446  Q
    ||||||||||||||| |  |||||||||| | |||||||| |||||| ||||||   ||||||||||||||||| ||| |||||||| |||||||    
T  2720702 cggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaaga 2720608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 13191615 - 13191550
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  13191615 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 13191550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 447
Target Start/End: Complemental strand, 14771857 - 14771762
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| | || | |||| | | |||||||| |||||| ||||||   ||||||||||||||||| ||| |||||||||||||||||    
T  14771857 cggaatgagagggatcccgaagccgtgtaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 14771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 9440570 - 9440493
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttg 425  Q
    ||||||||||||||||||| |||| |||||||| | ||| |||| |||||| ||| ||  ||||||||||||||||||    
T  9440570 acatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttg 9440493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 13492396 - 13492441
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  13492396 gcttataagaattgtttgatattacctatatcaacaagatgcatct 13492441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 17851363 - 17851483
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || ||||||||||||||| | |||| |||||| | ||| |||| ||||||  || ||  ||||||||||  |||||| ||| |    
T  17851363 tagacgaaccgaatca-caccggaatgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtacta 17851461  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||| ||||||||||||||||||    
T  17851462 cctttatcaacaagatgcatct 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 20735759 - 20735804
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  20735759 gcttataagaattgtttgatactacttatatcaacaagatgcatct 20735804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 28065980 - 28065875
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| || |||||||| |   ||||||||  ||| | ||| ||  |||||||||||||||||| ||| | || ||||||||||||    
T  28065980 acatcggaatgagagggatcctaaggtcgtgtagaaatgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaagat 28065881  T
Q  448 gcatct 453  Q
    ||||||    
T  28065880 gcatct 28065875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 2681367 - 2681253
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||| | |  || |||| |||||| ||| ||   ||||||||||||||||| ||| ||| |||    
T  2681367 aaccgaatca-caccggaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccata 2681269  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  2681268 tcaacaagatgcatct 2681253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 9352066 - 9352171
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||| |||||||||||| ||||||  ||| | | |||||||| |||||| |||||    ||||||| | ||||||| ||| |||||||| ||||||||    
T  9352066 acatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaacaagat 9352165  T
Q  448 gcatct 453  Q
    ||||||    
T  9352166 gcatct 9352171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 451
Target Start/End: Complemental strand, 9440973 - 9440896
Alignment:
Q  374 tcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||| |||||  ||| |||||| |||||| |||||||||||||| |||| ||| || | ||||||||||||||||    
T  9440973 tcgtgcaggcatggaactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcat 9440896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 11062325 - 11062394
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| ||| |||||| ||||||  ||||||||||| |||||  ||| |||||||||||||||||||||||    
T  11062325 atgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatct 11062394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 23776449 - 23776550
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    |||||||||||| || |||||| | || | | ||| |||| |||||| ||||||   ||||||||||| || || ||| |||||||||||||||||||||    
T  23776449 cggaatgagaggtatcctgaggccttgtaggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcat 23776548  T
Q  452 ct 453  Q
    ||    
T  23776549 ct 23776550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 32292889 - 32292994
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| ||||||||||  || || || ||||||| | |||||||| |||||| ||| ||  |||||||||||||||||| ||| ||||||| |||||| ||    
T  32292889 acattggaatgagagaaatccttagatcgtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaat 32292988  T
Q  448 gcatct 453  Q
     |||||    
T  32292989 acatct 32292994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 28583027 - 28583071
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatc 452  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||    
T  28583027 gcttataagaattatttgatacgatctatatcaacaagatgcatc 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 15929646 - 15929691
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||| |||| ||| |||||||||||||| ||||||||    
T  15929646 gcttataagaattatttggtactacctatatcaacaaaatgcatct 15929691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 21311519 - 21311624
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||| |  ||||| ||| || | ||| |||| |||||| ||||||   ||||||||||||||||| ||  ||||| || ||||||||    
T  21311519 acatcggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagat 21311618  T
Q  448 gcatct 453  Q
     |||||    
T  21311619 ccatct 21311624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 31284418 - 31284313
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||  |||||||||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  31284418 acatcggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 31284319  T
Q  448 gcatct 453  Q
    ||||||    
T  31284318 gcatct 31284313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 25248115 - 25248220
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||||| ||| |||||| | ||| |||| ||||||  ||||| || |||||||||||||||| ||| |||||||||||||||||    
T  25248115 acatcggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaacaagat 25248214  T
Q  448 gcatct 453  Q
    ||||||    
T  25248215 gcatct 25248220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 41472305 - 41472409
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||||||| || | |||||||| |||||| ||||||  |||||||||||||||||| ||| || ||||||||||||||    
T  41472305 acatcggaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaagga-agcttataagaattgtttggtactacatatatcaacaagat 41472403  T
Q  448 gcatct 453  Q
    ||||||    
T  41472404 gcatct 41472409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 20885259 - 20885154
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||| ||||||||||||  |||||||||| | | ||| |||| |||||| ||||||   ||||||||||||||||||||| |||||||||||||||||    
T  20885259 acatcgcaatgagagggatcttgaggtcgtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagat 20885160  T
Q  448 gcatct 453  Q
    ||||||    
T  20885159 gcatct 20885154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 28561754 - 28561855
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||||||    
T  28561754 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 28561853  T
Q  452 ct 453  Q
    ||    
T  28561854 ct 28561855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 39653172 - 39653273
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||| ||||| |||||||||||||||||||||    
T  39653172 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcat 39653271  T
Q  452 ct 453  Q
    ||    
T  39653272 ct 39653273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 7477195 - 7477300
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| || | |||||||| | |||||||| |||||| ||||||  ||||||||||||| |||| ||| || ||||||||||||||    
T  7477195 acatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 7477294  T
Q  448 gcatct 453  Q
     |||||    
T  7477295 acatct 7477300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 7493885 - 7493990
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| ||| || | |||||||| | |||||||| |||||| ||||||  ||||||||||||| |||| ||| || ||||||||||||||    
T  7493885 acatcggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagat 7493984  T
Q  448 gcatct 453  Q
    ||||||    
T  7493985 gcatct 7493990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 16811385 - 16811490
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||| | |  || ||||||||||| ||||||  |||||||||||||||| | ||| |||||| ||||||||||    
T  16811385 acatcggaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagat 16811484  T
Q  448 gcatct 453  Q
    ||||||    
T  16811485 gcatct 16811490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 25230390 - 25230285
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||| ||||||||| ||||||||||| | | ||| |||| |||||| ||||||  ||||||||||||| |||| ||| |||||||||||||||||    
T  25230390 acatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 25230291  T
Q  448 gcatct 453  Q
     |||||    
T  25230290 acatct 25230285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 25237977 - 25237872
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||| ||||||||| ||||||||||| | | ||| |||| |||||| ||||||  ||||||||||||| |||| ||| |||||||||||||||||    
T  25237977 acatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 25237878  T
Q  448 gcatct 453  Q
     |||||    
T  25237877 acatct 25237872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 25239211 - 25239114
Alignment:
Q  356 atgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||| | | ||| ||||  ||||| ||||||  ||||||||||||| |||| ||| |||||||||||||||||||||||    
T  25239211 atgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatct 25239114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 30529691 - 30529796
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| ||||||  ||| | | |||||||| |||||| |||| |  ||||||||||||| |||| ||| |||||||||||||||||    
T  30529691 acatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagat 30529790  T
Q  448 gcatct 453  Q
    ||||||    
T  30529791 gcatct 30529796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 50347754 - 50347855
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| |||||| | || ||| |||||||| | |||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  50347754 cggaatgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 50347853  T
Q  452 ct 453  Q
    ||    
T  50347854 ct 50347855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 25230847 - 25230744
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| |||||||||||||| |||||| | || | | |||||||| |||||| ||||||  | |||||||||||||||| ||| |||||||||||||||||    
T  25230847 acattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagat 25230748  T
Q  448 gcat 451  Q
    ||||    
T  25230747 gcat 25230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 25238434 - 25238331
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| |||||||||||||| |||||| | || | | |||||||| |||||| ||||||  | |||||||||||||||| ||| |||||||||||||||||    
T  25238434 acattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagat 25238335  T
Q  448 gcat 451  Q
    ||||    
T  25238334 gcat 25238331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 8067284 - 8067389
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||  |||||| |||||| | ||| || | |||||| |||||   |||||||||||||||||  ||| |||||||||||||||||    
T  8067284 acatcggaatgagagggaccctgaggccgtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaacaagat 8067383  T
Q  448 gcatct 453  Q
    ||||||    
T  8067384 gcatct 8067389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 11180172 - 11180071
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| |||||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  11180172 cggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 11180073  T
Q  452 ct 453  Q
    ||    
T  11180072 ct 11180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 14813944 - 14814058
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||| | | |||||||| ||||||  |||||  |||||||| ||||||||| ||| |||||||    
T  14813944 aaccgaatca-caccggaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctata 14814042  T
Q  438 tcaacaagatgcatct 453  Q
    |||| |||||||||||    
T  14814043 tcaataagatgcatct 14814058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 27187472 - 27187367
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| |||||||||||||| ||||||  ||||||| ||| |||| ||||||  || ||  |||||||||||||||||| ||| ||||||||||  |||||    
T  27187472 acattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcactaagat 27187373  T
Q  448 gcatct 453  Q
    ||||||    
T  27187372 gcatct 27187367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 39640941 - 39641046
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||| ||| |||||| |||| | | |||||||| |||||| ||||||   ||||||||| ||||||| ||| ||||||||||| |||||    
T  39640941 acatcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagat 39641040  T
Q  448 gcatct 453  Q
    ||||||    
T  39641041 gcatct 39641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 451
Target Start/End: Original strand, 2911084 - 2911202
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||| |||||||||| || | ||||||||||||| | |||| |||||| | ||| |||  |||||| ||| || || |||||| ||||||||||||  |    
T  2911084 tagacgaaccgaatca-cacctgaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatatta 2911182  T
Q  432 cctatatcaacaagatgcat 451  Q
    ||||||||||||||||||||    
T  2911183 cctatatcaacaagatgcat 2911202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 37045030 - 37045144
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||| ||||||||||||| |||||| |||| | |  || |||| ||||   |||||| ||||||||||||||||||| ||  |||||||    
T  37045030 aaccgaatca-catctgaatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctata 37045128  T
Q  438 tcaacaagatgcatct 453  Q
    |||||||| |||||||    
T  37045129 tcaacaaggtgcatct 37045144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 453
Target Start/End: Complemental strand, 13150657 - 13150591
Alignment:
Q  387 agactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||||    
T  13150657 agactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 13150591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 13150237 - 13150136
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | |||||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||| ||||||||||||||||    
T  13150237 cggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcat 13150138  T
Q  452 ct 453  Q
    ||    
T  13150137 ct 13150136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 32227359 - 32227258
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| || ||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||| ||||||||||||    
T  32227359 cggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcat 32227260  T
Q  452 ct 453  Q
    ||    
T  32227259 ct 32227258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 32227509 - 32227609
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| |||||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||| ||||||||||||    
T  32227509 cggaatgagagggat-ctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcat 32227607  T
Q  452 ct 453  Q
    ||    
T  32227608 ct 32227609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 32797092 - 32796972
Alignment:
Q  332 tagacaaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgatacca 431  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||  | || | | |||| ||| |||||| |||| |   ||||||||||||||||| ||| |    
T  32797092 tagacaagccgaatca-catcgaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtacta 32796994  T
Q  432 cctatatcaacaagatgcatct 453  Q
    ||||||||||||||||||||||    
T  32796993 cctatatcaacaagatgcatct 32796972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 394 - 453
Target Start/End: Complemental strand, 32386830 - 32386771
Alignment:
Q  394 atggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||| ||||||  |||||||||||||||||| ||| |||||||| ||||||||||||||    
T  32386830 atggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatct 32386771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 447
Target Start/End: Original strand, 41474001 - 41474100
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||| ||||||||||||  ||||||||| || | ||| ||||  |||||  |||||   |||||||||||||||||||||  ||||||||||||||||    
T  41474001 acatcgaaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaacaagat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 14820218 - 14820263
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||    
T  14820218 gcttataagaattgtttggtactacttatatcaacaagatgcatct 14820263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 453
Target Start/End: Complemental strand, 25238790 - 25238721
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| |||||| ||||||   ||||||||||||||||| ||| | || ||||||||||||||||||    
T  25238790 atgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatct 25238721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 29224364 - 29224433
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| |||||| ||||||   ||||||||||||||||| ||| |||||||  ||||||||||||||    
T  29224364 atgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatct 29224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 4067441 - 4067397
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||    
T  4067441 cttataaaaattgtttggtactacctatatcaacaagatgcatct 4067397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 3890046 - 3890087
Alignment:
Q  412 ataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatct 3890087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 16810929 - 16811034
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||  ||||| |||| |   ||| |||| |||||| || |||  ||||||||||||||||   ||| | ||||||| |||||||    
T  16810929 acatcggaatgagagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagat 16811028  T
Q  448 gcatct 453  Q
    ||||||    
T  16811029 gcatct 16811034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 25802626 - 25802585
Alignment:
Q  412 ataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| ||||| ||| |||||||||||||||||||||||    
T  25802626 ataagaatggtttggtactacctatatcaacaagatgcatct 25802585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 2044062 - 2044165
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| ||||||  ||| | | |||||||| |||||| ||||||  |||||||||||||||||||||| |||||||||||||||||    
T  2044062 acatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagat 2044161  T
Q  448 gcat 451  Q
    ||||    
T  2044162 gcat 2044165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 10844878 - 10844992
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  10844878 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctata 10844976  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  10844977 tcaacaagatgcatct 10844992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 27925894 - 27926008
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| ||||||  | |||||||||||||||| ||| |||||||    
T  27925894 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctata 27925992  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  27925993 tcaacaagatgcatct 27926008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 32292392 - 32292506
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||||| |||||| | ||| |||| |||||| |||||| ||||||||||||||||||| ||| | |||||    
T  32292392 aaccgaatca-caccggaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctata 32292490  T
Q  438 tcaacaagatgcatct 453  Q
    |||||||| |||||||    
T  32292491 tcaacaagttgcatct 32292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 41659256 - 41659142
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| | |||| |||||||| | ||| |||| |||||| ||||||   ||||||||||||||||| ||| |||||||    
T  41659256 aaccgaatca-caccggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctata 41659158  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  41659157 tcaacaagatgcatct 41659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 453
Target Start/End: Complemental strand, 28375189 - 28375091
Alignment:
Q  355 aatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||| |||||| |||||| | |||||||| |||| | ||||||  |||||||||||||||||| ||| ||||| |||||||||||||||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatct 28375091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 28453346 - 28453447
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| | ||||||||||| | |||||||| |||||| ||| ||   |||||||||||||||| |||| |||||||| ||||||||||||    
T  28453346 cggaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcat 28453445  T
Q  452 ct 453  Q
    ||    
T  28453446 ct 28453447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 34308621 - 34308516
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||| |||||| |||||| ||| || | ||||||||  ||||| ||||||  ||||||||||| |||||| ||| |||||||||||||||||    
T  34308621 acatcggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagat 34308522  T
Q  448 gcatct 453  Q
    ||||||    
T  34308521 gcatct 34308516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 27819398 - 27819283
Alignment:
Q  337 aaaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctat 436  Q
    ||||||||||| |||| |||||||||||||  ||| ||| |||| | |||||||| |||||| ||||||  ||| |||||||||||||| ||| ||||||    
T  27819398 aaaccgaatca-catcagaatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctat 27819300  T
Q  437 atcaacaagatgcatct 453  Q
    |||||||| ||||||||    
T  27819299 atcaacaaaatgcatct 27819283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 8080484 - 8080381
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||| | |||| | | ||| |||| |||||| ||||||  ||| |||||||||||||| ||| |||||||||||||||||    
T  8080484 acatcggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagat 8080385  T
Q  448 gcat 451  Q
    ||||    
T  8080384 gcat 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 22026374 - 22026488
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||| |  ||||| |||||| | ||| |||| |||||| ||| ||  |||||||||||||||||| ||| |||||||    
T  22026374 aaccgaatca-caccggaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctata 22026472  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  22026473 tcaacaagatgcatct 22026488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 453
Target Start/End: Original strand, 17103086 - 17103190
Alignment:
Q  349 catcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatg 448  Q
    |||||||||||||| ||| |||||| ||| || | |||||||| |||||| ||||||   ||||||||||||||||| |||  |||||||||||||| ||    
T  17103086 catcggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctg 17103185  T
Q  449 catct 453  Q
    |||||    
T  17103186 catct 17103190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 22549146 - 22549032
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || ||||||||||||  | ||||||  ||||| | ||| |||| |||||| ||||||   ||||||||||||||||| ||| |||||||    
T  22549146 aaccgaatca-caccggaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctata 22549048  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  22549047 tcaacaagatgcatct 22549032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 27022015 - 27021916
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||| |||||| | || | | || ||||| |||||| ||||||  |||||||||||||||||| ||| || ||||||||||||||||||||    
T  27022015 gaatgagagggatcctgaggccatgtaggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatct 27021916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 10844753 - 10844652
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | |||||| | |||| | ||| |||| |||||| ||||||  |||||||||| ||||||| ||| |||||||| ||||||||||||    
T  10844753 cggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcat 10844654  T
Q  452 ct 453  Q
    ||    
T  10844653 ct 10844652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 12827392 - 12827291
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||||| |||||| | || | | ||| |||| | |||| ||||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  12827392 cggaatgagagggatcctgaggccttgtaggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcat 12827293  T
Q  452 ct 453  Q
    ||    
T  12827292 ct 12827291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 22548687 - 22548586
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | ||||||  ||||| | ||| |||| |||||| ||||||    |||||||||||||||| ||| |||||||||||||||||||||    
T  22548687 cggaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcat 22548588  T
Q  452 ct 453  Q
    ||    
T  22548587 ct 22548586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 25147576 - 25147645
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| |||||| ||||||  |||||||||||||||||| | | |||||||||||||||||||||||    
T  25147576 atgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatct 25147645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 27022480 - 27022375
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||||||||  ||||| | || | | ||| |||| |||||| ||| ||  |||||||||||||||||| ||| |||||||||||||| ||    
T  27022480 acatcggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacat 27022381  T
Q  448 gcatct 453  Q
    ||||||    
T  27022380 gcatct 27022375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 21316243 - 21316147
Alignment:
Q  356 atgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatc 452  Q
    ||||||||||| || ||| |||||| | ||||||||  |||||  || ||| ||||| |||||||||||| ||| ||||||||||||||||||||||    
T  21316243 atgagagggatcctaaggccgtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaacaagatgcatc 21316147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 34309081 - 34308972
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacc----tatatcaaca 443  Q
    ||||||||||||||||||| |||||| ||| || | ||||||||  ||||| ||||||  ||||||||||| |||||| ||| |||    ||||||||||    
T  34309081 acatcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatatatcaaca 34308982  T
Q  444 agatgcatct 453  Q
    ||||||||||    
T  34308981 agatgcatct 34308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 6465052 - 6464949
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||| ||||||||||| ||  ||||| |||| | | |||  ||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  6465052 acattggaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 6464953  T
Q  448 gcat 451  Q
    ||||    
T  6464952 gcat 6464949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 22840671 - 22840566
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| ||| ||||||   || | | |||||||| |||||| ||| ||   ||||||||||||||||| ||| | |||||||||||||||    
T  22840671 acatcggaatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagat 22840572  T
Q  448 gcatct 453  Q
    ||||||    
T  22840571 gcatct 22840566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 453
Target Start/End: Original strand, 22705181 - 22705281
Alignment:
Q  353 ggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatc 452  Q
    |||||||||||||| |||| | |||| | | ||| ||||  ||| | ||||||  | |||||||||||||||| ||| ||||||||||||||||||||||    
T  22705181 ggaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatc 22705280  T
Q  453 t 453  Q
    |    
T  22705281 t 22705281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 33852394 - 33852295
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||| | |||  |||||| | ||||||||  ||||| ||||||   ||||||||||||||||| ||| |||||||| ||||||||| ||||    
T  33852394 gaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatct 33852295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 447
Target Start/End: Original strand, 1297020 - 1297110
Alignment:
Q  357 tgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||| ||||||| || |||| | |||||||| |||||| |||| |   ||||||||||||||||| ||| ||||||| |||||||||    
T  1297020 tgagaggggttctgagatcatgcaggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 12100731 - 12100800
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| |||||| |||||   |||||||||| ||||||| ||| ||||||||||| |||||||||||    
T  12100731 atgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatct 12100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 25144836 - 25144881
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  25144836 gcttataagaattgtttggtactacctatatcagcaagatgcatct 25144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 450
Target Start/End: Original strand, 3744657 - 3744744
Alignment:
Q  363 ggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgca 450  Q
    ||||| |||||||||| | | ||| |||| |||||| ||||||   |||||||||||||||||| || ||||||| |||||| |||||    
T  3744657 ggattttgaggtcgtgtaggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgca 3744744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 453
Target Start/End: Original strand, 3745100 - 3745210
Alignment:
Q  343 aatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaac 442  Q
    |||| |||||| |||||||||||| || |||||||||| ||    |||| |||||| ||||||   |||||||||| |||||  ||| ||||||| ||||    
T  3745100 aatccacatcgaaatgagagggatcctaaggtcgtgcaggctaaggactacatggttgaaggaaaacttataagaactgtttagtactacctataccaac 3745199  T
Q  443 aagatgcatct 453  Q
    || ||||||||    
T  3745200 aatatgcatct 3745210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 15567698 - 15567593
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||| |||  |||  ||| ||| | || ||||  |||||| ||||||  ||||||||||||||||||| || || |||| |||||||||    
T  15567698 acatcggaatgagagagatcttgacatcgcgcaagtattagacatcatggtggaaggaaggcttataagaattgtttgacactacatataccaacaagat 15567599  T
Q  448 gcatct 453  Q
     |||||    
T  15567598 acatct 15567593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 451
Target Start/End: Original strand, 25147977 - 25148074
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | ||||||||| | | ||| ||||   | || ||||||  |||||||||||||||||| |   |||||||||||||||||||||    
T  25147977 gaatgagagggatcccgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcat 25148074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 41913034 - 41913075
Alignment:
Q  408 gcttataagaattgtttgataccacctatatcaacaagatgc 449  Q
    |||||||||||||||||| | | |||||||||||||||||||    
T  41913034 gcttataagaattgtttggtgctacctatatcaacaagatgc 41913075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 6466775 - 6466819
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||| ||||||||| ||| ||||||| |||||||||||||||    
T  6466775 cttataaaaattgtttggtactacctataccaacaagatgcatct 6466819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 15568086 - 15568042
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||||    
T  15568086 cttataacaattgtttggtatgacctatatcaacaagatgcatct 15568042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 30334989 - 30334945
Alignment:
Q  409 cttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||| ||||||||||||| ||||||| ||||||||| |||||    
T  30334989 cttataaaaattgtttgatactacctataccaacaagatacatct 30334945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 10304 - 10409
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||||||| ||| |||| ||||||  |||||  |||||||||||||||||  ||| |||||||||||||||||    
T  10304 acatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagat 10403  T
Q  448 gcatct 453  Q
    ||||||    
T  10404 gcatct 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 18970 - 19075
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| | |||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  18970 acatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 19069  T
Q  448 gcatct 453  Q
     |||||    
T  19070 tcatct 19075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 18276 - 18171
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| |||| | | ||| |||| ||| || ||||||   ||||||||||||||||||||| |||||||||||||||||    
T  18276 acatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagat 18177  T
Q  448 gcatct 453  Q
    ||||||    
T  18176 gcatct 18171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 17740 - 17635
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||| ||||||||||||| |||||| |||| | | ||| |||| |||||| ||||||  |||||||||||||||||| ||| ||||||||||||| |||    
T  17740 acatcagaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggat 17641  T
Q  448 gcatct 453  Q
    | ||||    
T  17640 gtatct 17635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 2352 - 2247
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||||||||||| |||| || ||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  2352 acatcggaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2253  T
Q  448 gcatct 453  Q
    ||||||    
T  2252 gcatct 2247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 2187 - 2088
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||| |||| | |||||| |||||| | |||||||| |||||| ||||||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  2187 gaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 2088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 162820 - 162715
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| ||| || | ||| |||| |||||| ||||||   ||||||||||||||||| ||| |||||||| ||||||||    
T  162820 acatcggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagat 162721  T
Q  448 gcatct 453  Q
    ||||||    
T  162720 gcatct 162715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 453
Target Start/End: Complemental strand, 69921 - 69852
Alignment:
Q  384 atgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||||| ||| || |||||| ||||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  69921 atgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatct 69852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 245090 - 245195
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| | || | | ||| |||| |||||| |||||   |||||||||||||||||| ||| |||||||||||||||||    
T  245090 acatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagat 245189  T
Q  448 gcatct 453  Q
    ||||||    
T  245190 gcatct 245195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 245559 - 245624
Alignment:
Q  388 gactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||| |||||| |||||  ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  245559 gacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatct 245624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 4118 - 4019
Alignment:
Q  354 gaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    ||||||||||||| | |||| |||||| | ||| |||| ||| || |||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  4118 gaatgagagggatcccgaggccgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatct 4019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 2746 - 2849
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    |||||| |||||||||||| |||||| |||| | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||||||||||||||||    
T  2746 acatcgaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 2845  T
Q  448 gcat 451  Q
    ||||    
T  2846 gcat 2849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 23668 - 23782
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || || |||||||||| |  ||||| |||||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  23668 aaccgaatca-caccgaaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 23766  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  23767 tcaacaagatgcatct 23782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 105724 - 105829
Alignment:
Q  348 acatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagat 447  Q
    ||||||||||||||||||| |||||| ||| || | |||  ||| || ||| ||||||  |||||||||||||||||| ||| |||||||||||||| ||    
T  105724 acatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaacaaaat 105823  T
Q  448 gcatct 453  Q
    ||||||    
T  105824 gcatct 105829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 4556 - 4670
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| |||||||| ||||||| | |||||| | |||| | ||| |||| |||||| ||||||  | ||| |||||||||||| ||| |||||||    
T  4556 aaccgaatca-catcggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctata 4654  T
Q  438 tcaacaagatgcatct 453  Q
    ||||||||||||||||    
T  4655 tcaacaagatgcatct 4670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 1215 - 1329
Alignment:
Q  338 aaccgaatcaacatcggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctata 437  Q
    |||||||||| || |||||||||| || | |||||| | |||| | ||| |||| |||||| ||||||  |||||||||||||||||| ||| |||||||    
T  1215 aaccgaatca-caccggaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 1313  T
Q  438 tcaacaagatgcatct 453  Q
    | ||||||||||||||    
T  1314 taaacaagatgcatct 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 154765 - 154866
Alignment:
Q  352 cggaatgagagggattctgaggtcgtgcatgcatgagactccatggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcat 451  Q
    ||||||||||||| | |||||| | || | | ||| |||| |||||| ||||||  |||||||||||||||| | ||| |||| ||||||||||||||||    
T  154765 cggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcat 154864  T
Q  452 ct 453  Q
    ||    
T  154865 ct 154866  T

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Target: scaffold0557 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 453
Target Start/End: Original strand, 2154 - 2214
Alignment:
Q  393 catggtagaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatct 453  Q
    |||||| ||||||  |||||||||||||||||| |||  ||||||| ||||||||||||||    
T  2154 catggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatct 2214  T

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Target: scaffold0391 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 14797 - 14849
Alignment:
Q  400 gaaggagtgcttataagaattgtttgataccacctatatcaacaagatgcatc 452  Q
    |||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  14797 gaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatc 14849  T

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