View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8981_low_112 (Length: 453)

Name: NF8981_low_112
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8981_low_112
NF8981_low_112
[»] chr1 (25 HSPs)
chr1 (222-440)||(1673755-1673969)
chr1 (1-221)||(1674119-1674336)
chr1 (1-99)||(52415687-52415785)
chr1 (1-102)||(4671953-4672054)
chr1 (1-101)||(11237580-11237679)
chr1 (3-101)||(31622763-31622861)
chr1 (1-95)||(36319432-36319526)
chr1 (1-102)||(19270212-19270313)
chr1 (1-81)||(4395534-4395614)
chr1 (1-101)||(41117523-41117623)
chr1 (1-101)||(11817479-11817579)
chr1 (1-86)||(11795464-11795549)
chr1 (1-86)||(40518586-40518671)
chr1 (1-101)||(32769529-32769629)
chr1 (1-102)||(23697406-23697503)
chr1 (1-92)||(30281155-30281246)
chr1 (7-101)||(6295177-6295271)
chr1 (1-78)||(2656249-2656326)
chr1 (1-86)||(2752192-2752277)
chr1 (32-101)||(10430070-10430139)
chr1 (1-91)||(1394891-1394981)
chr1 (1-102)||(13254131-13254232)
chr1 (1-102)||(52957744-52957845)
chr1 (1-41)||(786624-786664)
chr1 (75-104)||(10675879-10675908)
[»] chr3 (25 HSPs)
chr3 (1-101)||(7259285-7259386)
chr3 (1-101)||(21959308-21959408)
chr3 (1-101)||(2599593-2599693)
chr3 (1-101)||(16236976-16237076)
chr3 (1-97)||(9589295-9589391)
chr3 (1-101)||(21933890-21933990)
chr3 (3-86)||(296987-297070)
chr3 (1-66)||(25841485-25841550)
chr3 (1-101)||(13779204-13779301)
chr3 (1-97)||(38750445-38750541)
chr3 (1-101)||(45647128-45647228)
chr3 (1-101)||(27817974-27818074)
chr3 (1-98)||(6472228-6472325)
chr3 (10-102)||(12568923-12569015)
chr3 (10-102)||(13545387-13545479)
chr3 (1-87)||(37030368-37030455)
chr3 (1-94)||(34669213-34669307)
chr3 (9-91)||(34824239-34824321)
chr3 (5-90)||(5494159-5494244)
chr3 (1-99)||(6749476-6749574)
chr3 (1-71)||(34823612-34823682)
chr3 (35-76)||(376281-376322)
chr3 (14-55)||(5482038-5482079)
chr3 (68-101)||(25842076-25842109)
chr3 (57-93)||(19578967-19579003)
[»] chr5 (21 HSPs)
chr5 (1-101)||(20202220-20202320)
chr5 (1-101)||(17558353-17558453)
chr5 (1-97)||(32717593-32717688)
chr5 (1-86)||(16366102-16366187)
chr5 (1-84)||(36059554-36059637)
chr5 (1-96)||(39585343-39585438)
chr5 (1-101)||(248881-248981)
chr5 (1-101)||(37270111-37270211)
chr5 (1-86)||(17201878-17201963)
chr5 (14-101)||(14655382-14655470)
chr5 (1-102)||(28620582-28620681)
chr5 (1-95)||(19804295-19804389)
chr5 (1-101)||(8544114-8544214)
chr5 (1-99)||(1584235-1584333)
chr5 (1-90)||(6428620-6428709)
chr5 (8-87)||(11825178-11825259)
chr5 (5-64)||(25612736-25612795)
chr5 (12-102)||(1584059-1584149)
chr5 (1-43)||(32474707-32474749)
chr5 (1-54)||(11991712-11991765)
chr5 (5-81)||(19133037-19133113)
[»] chr6 (10 HSPs)
chr6 (1-101)||(21526905-21527005)
chr6 (1-101)||(7972243-7972343)
chr6 (1-95)||(6026574-6026668)
chr6 (4-101)||(8049898-8049995)
chr6 (1-95)||(26252000-26252094)
chr6 (1-78)||(8461232-8461309)
chr6 (1-86)||(14093211-14093295)
chr6 (67-101)||(7833444-7833478)
chr6 (1-102)||(25057099-25057200)
chr6 (1-86)||(31656123-31656208)
[»] chr2 (22 HSPs)
chr2 (1-101)||(12413000-12413100)
chr2 (1-101)||(12425060-12425160)
chr2 (1-98)||(4958966-4959063)
chr2 (1-101)||(34424362-34424462)
chr2 (1-106)||(20170893-20170998)
chr2 (1-102)||(7485679-7485780)
chr2 (1-100)||(33660661-33660760)
chr2 (1-94)||(27747021-27747112)
chr2 (1-94)||(15507990-15508083)
chr2 (1-101)||(1398015-1398115)
chr2 (1-100)||(42871889-42871988)
chr2 (1-86)||(41541707-41541792)
chr2 (1-101)||(25713477-25713577)
chr2 (1-86)||(11084432-11084517)
chr2 (1-98)||(16806023-16806120)
chr2 (1-98)||(16845304-16845401)
chr2 (1-101)||(29408315-29408415)
chr2 (1-101)||(36243499-36243598)
chr2 (1-88)||(157605-157692)
chr2 (1-44)||(3309450-3309493)
chr2 (1-86)||(44898717-44898802)
chr2 (62-102)||(42758136-42758176)
[»] chr7 (28 HSPs)
chr7 (1-101)||(39434485-39434586)
chr7 (1-101)||(4962536-4962636)
chr7 (1-101)||(14771015-14771116)
chr7 (1-101)||(15221467-15221568)
chr7 (2-101)||(46671618-46671719)
chr7 (1-101)||(25291007-25291108)
chr7 (1-101)||(39429912-39430015)
chr7 (1-86)||(15643690-15643774)
chr7 (1-94)||(33258954-33259047)
chr7 (1-102)||(16197386-16197487)
chr7 (1-101)||(2271324-2271424)
chr7 (1-102)||(27723814-27723915)
chr7 (1-102)||(17270145-17270246)
chr7 (5-101)||(35792491-35792588)
chr7 (1-101)||(28226851-28226951)
chr7 (1-91)||(4678915-4679008)
chr7 (1-86)||(37124714-37124799)
chr7 (1-89)||(39618226-39618314)
chr7 (1-101)||(1752037-1752137)
chr7 (53-101)||(24393682-24393730)
chr7 (1-95)||(10534415-10534508)
chr7 (30-92)||(39599314-39599376)
chr7 (2-87)||(27061974-27062059)
chr7 (1-101)||(12394787-12394887)
chr7 (31-95)||(43369113-43369176)
chr7 (68-102)||(35793254-35793288)
chr7 (1-86)||(4567918-4568003)
chr7 (1-100)||(2798903-2799003)
[»] chr8 (19 HSPs)
chr8 (1-98)||(9455619-9455715)
chr8 (1-86)||(3443319-3443405)
chr8 (1-104)||(29315218-29315321)
chr8 (9-92)||(7577822-7577905)
chr8 (1-94)||(35970069-35970162)
chr8 (1-101)||(36683452-36683552)
chr8 (5-96)||(13385441-13385532)
chr8 (1-101)||(34039415-34039515)
chr8 (5-101)||(32234228-32234324)
chr8 (1-92)||(38402072-38402161)
chr8 (53-101)||(2742535-2742583)
chr8 (1-86)||(1256236-1256321)
chr8 (1-102)||(3742270-3742370)
chr8 (74-104)||(12249004-12249034)
chr8 (1-55)||(14897109-14897163)
chr8 (68-102)||(29316036-29316070)
chr8 (1-101)||(27232211-27232309)
chr8 (1-46)||(34146806-34146851)
chr8 (1-101)||(5871376-5871476)
[»] chr4 (33 HSPs)
chr4 (1-102)||(38433826-38433927)
chr4 (1-101)||(37371006-37371108)
chr4 (1-86)||(55344118-55344204)
chr4 (13-91)||(24537900-24537979)
chr4 (1-102)||(17330952-17331053)
chr4 (1-102)||(9088730-9088831)
chr4 (1-101)||(49299306-49299407)
chr4 (1-101)||(1821057-1821157)
chr4 (1-101)||(47943946-47944046)
chr4 (1-87)||(49263604-49263690)
chr4 (1-101)||(19443032-19443132)
chr4 (1-103)||(33890139-33890241)
chr4 (1-102)||(9808153-9808252)
chr4 (1-101)||(37209530-37209630)
chr4 (1-100)||(41503096-41503196)
chr4 (1-101)||(45666841-45666941)
chr4 (1-85)||(53370054-53370138)
chr4 (1-102)||(38044231-38044332)
chr4 (1-78)||(45634927-45635004)
chr4 (1-102)||(54982141-54982242)
chr4 (1-85)||(24073335-24073419)
chr4 (1-85)||(34031469-34031554)
chr4 (1-102)||(46430386-46430487)
chr4 (2-86)||(23674124-23674208)
chr4 (5-101)||(50721473-50721569)
chr4 (13-101)||(6949563-6949651)
chr4 (58-102)||(8077787-8077831)
chr4 (68-101)||(668197-668230)
chr4 (1-102)||(26625573-26625674)
chr4 (12-101)||(38839883-38839972)
chr4 (12-81)||(46196526-46196595)
chr4 (69-101)||(17330740-17330772)
chr4 (1-73)||(53393906-53393978)
[»] scaffold1130 (1 HSPs)
scaffold1130 (1-101)||(765-866)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-97)||(45906-46000)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-86)||(271856-271946)
scaffold0005 (1-63)||(257321-257383)
[»] scaffold0841 (2 HSPs)
scaffold0841 (1-101)||(3815-3915)
scaffold0841 (8-101)||(5081-5174)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-55)||(5628-5682)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-90)||(48479-48570)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-43)||(184597-184639)
[»] scaffold1327 (1 HSPs)
scaffold1327 (1-86)||(1309-1394)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 222 - 440
Target Start/End: Complemental strand, 1673969 - 1673755
Alignment:
Q  222 attaataaggtagataactaagttgataaggtcacgactcatgagatgacaagattaaatatttagtcgctgtcaactgtatttggtttaaggaaaaggt 321  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1673969 attaataaggtagataactaagt--ataaggtcacgactcatgagatgacaagattaaatatttagtcgctgtcaactgtatttggtttaaggaaaaggt 1673872  T
Q  322 aaccaagcttggggcaaagaaagtgaatgtgatgaatatgtgttatgaattatggaagctcaatcaattcaaccaccaagaaaataacaacattataaac 421  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  1673871 aaccaagcttggggcaaagaaagtgaa-gtgatgaatatgtgttatgaattat-gaagctcaatcaattcaaccaccaagaaaataacaacactataaac 1673774  T
Q  422 ttttttcttgtagaagttg 440  Q
    |||||||||||||||||||    
T  1673773 ttttttcttgtagaagttg 1673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1674336 - 1674119
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||| ||| |||| |||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1674336 attaaaatgaggatatgatagaaaaaa--tgtacaaaaatacactttgttatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 1674239  T
Q  101 aaattgcaagatgttgatccaactgttcctttattgctagtatttgcaaatttgaaagagagatgaactaatctagtagtaataattataacatttatga 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1674238 aaattgcaagatgttgatccaattgttcctttattgctagtatttgc-aatttgaaagagagatgaactaatctagtagtaataattataacatttatga 1674140  T
Q  201 ttttataattcattttaatac 221  Q
    |||||||||||||||||||||    
T  1674139 ttttataattcattttaatac 1674119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52415687 - 52415785
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    |||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||| ||| |||  ||||||||||||||||||||| ||||||||||||    
T  52415687 attaaattgagggtataataggaagaaaatgtgtaaaaatacactttgctattttcgtggtaattttctaaaacgacacttaaaaaggaacggagggag 52415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4671953 - 4672054
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||| ||||||||||||| ||| | |||||||||||||||||||||||| |||  ||  |||||||||||||||||||||||||||||||||||    
T  4671953 attaaattgaaggtataataggaagaaaatatgcaaaaatacactttgctattttcgtggaaattttctaaaacgacacttaaaaaagaacggagggagt 4672052  T
Q  101 aa 102  Q
    ||    
T  4672053 aa 4672054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11237679 - 11237580
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||| |||||||||||||||||   |||||||||||||||  |||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  11237679 attaaaatgatggtataataggaaaaaaaa-tgcaaaaatacacttcactatttttgtgttataattctaaaacgacacttaaaaagtaacggagggagt 11237581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 31622861 - 31622763
Alignment:
Q  3 taaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||| | |||||||||| |||||||||| || |||||||||||| ||||||| ||||||    
T  31622861 taaaatgagggaataataggagaaaaatgtgcaaaaatacacttcgttatttttgtgctaaaattctagaatgacacttaaaaaggaacggatggagta 31622763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36319526 - 36319432
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggag 95  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||| | ||||||||||||||||  |||||||| || ||||||||| ||||||||    
T  36319526 attaaaatgagagtataataggaagaaaatgtgcaaaaatacacatcgctatttttgtgttaattttctaaaaagatacttaaaaaggaacggag 36319432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19270212 - 19270313
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||| || |||| ||||||| ||||||||| |||| ||| ||||||| |||  ||||||||||||||||| ||||||||| |||    
T  19270212 attaaaatgagggtataataagacaaaaatgtgcaataatacacttcgctaatttggtgttaatatttcaaaacgacacttaaaaaggaacggaggtagt 19270311  T
Q  101 aa 102  Q
    ||    
T  19270312 aa 19270313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4395614 - 4395534
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacactt 81  Q
    |||||||||| ||||||||||||| |||  ||| |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  4395614 attaaaatgatggtataataggaagaaaaggtgaaaaaatacacttcgctatttttgtgttaaaattccaaaacgacactt 4395534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41117523 - 41117623
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||||| ||||||   ||||||||||||| | |||| ||| |||||||  |||||||| |||||||||||||||| |||||||||    
T  41117523 attaaaatgagggtataatagaaaaaaaaaatgcaaaaatacacatcgctagtttggtgttaattttctaaaaagacacttaaaaaagaatggagggagt 41117622  T
Q  101 a 101  Q
    |    
T  41117623 a 41117623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11817579 - 11817479
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||||||| | ||||||||||| | |||||| ||| |||||||  || ||||| || |||||||||  ||||||||||||    
T  11817579 attaaaatgagggtataataggaaaaaaatctgcaaaaatacgcattgctaatttggtgttaattttttaaaaagaaacttaaaaataaacggagggagt 11817480  T
Q  101 a 101  Q
    |    
T  11817479 a 11817479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11795549 - 11795464
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||| ||| ||| ||||||||||||| |||   |||||| | ||||| ||||||||||||||||||||||    
T  11795549 attaaaatgagggtataatatgaagaaaatgtgcaaaaatactcttcaatattttagcgttaatattctaaaacgacacttaaaaa 11795464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40518671 - 40518586
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||  ||  ||| || ||||||||||||||||||    
T  40518671 attaaattgagggtataataggaagaaaatgtgcaaaaatacactttgttattttcatggaaaatttttaaaacgacacttaaaaa 40518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32769529 - 32769629
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||||| ||||||||||| ||| |||| ||||||| | ||||||||||| |||  ||  ||||||||||||||||||||| ||| |||||||||    
T  32769529 attaaattgaggatataataggaagaaaatgtgaaaaaataaaatttgctattttcgtgaaaattttctaaaacgacacttaaaaaggaatggagggagt 32769628  T
Q  101 a 101  Q
    |    
T  32769629 a 32769629  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23697503 - 23697406
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||| |||||||||||||||| |||||||||||| |   |||| |  |||||||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  23697503 attataatgagggtataatag-aaaaaagtgtgcga---tacaatacgctatttttgtgttaaaattttaaaacgacacctaaaaatgaatggagggagt 23697408  T

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Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30281155 - 30281246
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacg 92  Q
    |||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||  ||  ||| ||  |||||||||||||||||| ||||    
T  30281155 attaaattgagggtataataggaagaaaatatgcaaaaatacactttgctattttgatggaaaattttcaaaacgacacttaaaaaaaaacg 30281246  T

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Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 6295271 - 6295177
Alignment:
Q  7 atgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||||||| || ||| ||||||||||||||| | |||||||| |||||||  |||||||| |||| ||||||| ||||| | ||||||    
T  6295271 atgagggtataatagaaagaaaatgtgcaaaaatacacatcgctattttagtgttaattttctaaaaagacatttaaaaaggaacgtacggagta 6295177  T

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Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2656249 - 2656326
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgaca 78  Q
    ||||||||||||||||||||| |||||  ||| ||||||| || || |||||||||||||| |||| |||||||||||    
T  2656249 attaaaatgagggtataatagtaaaaatatgtacaaaaatgcagttcgctatttttgtgttcaaatactaaaacgaca 2656326  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2752192 - 2752277
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||  || |||  |||||  |||||||||||| |||||||||    
T  2752192 attaaaatgagggtataataggaagaaaatgtacaaaaatacactttcttaatttaatgttactattctaaaacgatacttaaaaa 2752277  T

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Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 10430139 - 10430070
Alignment:
Q  32 tgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||||||||||||| |||  |||||| |||| ||||| ||||||||||||||||||||| ||||    
T  10430139 tgcaaaaatacactttgctaatttgatgttaatattccaaaacaacacttaaaaaagaacggaggaagta 10430070  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1394891 - 1394981
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaac 91  Q
    |||||||||||||||| |||| || ||| |||| ||||||||||||  ||| |||  ||| || |||||||||||||||||||||| ||||    
T  1394891 attaaaatgagggtatgatagaaagaaaatgtgaaaaaatacacttcactaatttgatgtgaatattctaaaacgacacttaaaaaggaac 1394981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13254232 - 13254131
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||| | |||||| ||| ||| ||||||||||||||| | ||||||||  ||||||  ||||||||  || |||||||| ||||||| |||||    
T  13254232 attaaaatgagagcataatatgaagaaaatgtgcaaaaatacacatcgctattttgatgttaattttctaaaaaaacgcttaaaaaggaacggatggagt 13254133  T
Q  101 aa 102  Q
    ||    
T  13254132 aa 13254131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 52957744 - 52957845
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||| ||||||| | ||| |||  ||||||||||||||||   | ||||  |||||| ||||||||| | ||||||||||||||| || |||||    
T  52957744 attaaaatgatggtataacatgaagaaaaggtgcaaaaatacacttcattgttttgatgttaatattctaaaatgccacttaaaaaagaacagatggagt 52957843  T
Q  101 aa 102  Q
    ||    
T  52957844 aa 52957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 786664 - 786624
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaata 41  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  786664 attaaaatgagggtaaaataggaaaaaagtgtacaaaaata 786624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 10675908 - 10675879
Alignment:
Q  75 gacacttaaaaaagaacggagggagtaaat 104  Q
    ||||||||||||||||||||||||||||||    
T  10675908 gacacttaaaaaagaacggagggagtaaat 10675879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7259386 - 7259285
Alignment:
Q  1 attaaaatgagggtataataggaaaaaa-gtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7259386 attaaaatgagggtataataggaaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaggaacggagggag 7259287  T
Q  100 ta 101  Q
    ||    
T  7259286 ta 7259285  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21959408 - 21959308
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| | ||||||| |||||||||| |||||||||||||||||||||||| | |||||    
T  21959408 attaaaatgagggtataataggaaaaaggtgtgcaaaaagacacttcgttatttttatgttaaaattttaaaacgacacttaaaaaagaacgaaaggagt 21959309  T
Q  101 a 101  Q
    |    
T  21959308 a 21959308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2599593 - 2599693
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||||||  |||||||| |||||||||||| |||||||||||||    
T  2599593 attaaaatgagggtataataggaataaaatgtgcaaaaatacacatcgctattttagtgttaattttctaaaaagacacttaaaaaggaacggagggagt 2599692  T
Q  101 a 101  Q
    |    
T  2599693 a 2599693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16237076 - 16236976
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| | ||||||||||||||||  |||||||| |||||||||||| |||||||||||||    
T  16237076 attaaaatgagggtataataggaagaaaatgtgaaaaaatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaaggaacggagggagt 16236977  T
Q  101 a 101  Q
    |    
T  16236976 a 16236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9589295 - 9589391
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggg 97  Q
    ||||||||||||||| |||||||| |||  ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||  |||||||||    
T  9589295 attaaaatgagggtacaataggaagaaaaagtgcaaaaatacactttgctattttggtgttaatattctaaaatgacacttaaaaataaacggaggg 9589391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21933990 - 21933890
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| |||||||||||| | || ||| ||||||||||||||||||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||    
T  21933990 attaaattgagggtataatcgtaagaaaatgtgcaaaaatacactttgctattttcatgaaaattttctaaaacgacacttaaaaaagaacggagggagt 21933891  T
Q  101 a 101  Q
    |    
T  21933890 a 21933890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 296987 - 297070
Alignment:
Q  3 taaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  296987 taaaatgagggtatagtaggaagaaaatgtacaaaaatacacttcgctattttggtgttaatattctaaaacgacacttaaaaa 297070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25841550 - 25841485
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaat 66  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  25841550 attaaaatgagggtataatagaaaaaaaatgtgcaaaaatacactttgttatttttgtgttaaaat 25841485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13779204 - 13779301
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||||| |||| ||||||||||| ||||||| | ||||||| |||||||||||||    
T  13779204 attaaaatgagggtataataggaaaaaa-tgtccaaaaacacactttgcta-ttttctgttaaaattc-aaaacgaaaattaaaaaggaacggagggagt 13779300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38750541 - 38750445
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggg 97  Q
    |||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||  ||  ||  ||||||||||||||||||||| ||||||||||    
T  38750541 attaaattgagagtataataggaagaaaatgtgcaaaaatacactttgctattttcatgaaaattttctaaaacgacacttaaaaaggaacggaggg 38750445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45647128 - 45647228
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||| ||||||  ||||||||  ||||||||||| |||||||| ||||    
T  45647128 attaaaatgagggtataataggaagaaaatgtgcaagaatacacatcgctatttttatgttaattttctaaaaaaacacttaaaaatgaacggagagagt 45647227  T
Q  101 a 101  Q
    |    
T  45647228 a 45647228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27817974 - 27818074
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||| ||||||||||||||| ||| ||||||||||| ||| | | ||||||||||||||  ||||||||  ||||||||||| ||||||| |||||    
T  27817974 attaaaataagggtataataggaataaaatgtgcaaaaatgcacatcgttatttttgtgttaattttctaaaaaaacacttaaaaaggaacggatggagt 27818073  T
Q  101 a 101  Q
    |    
T  27818074 a 27818074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6472325 - 6472228
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggga 98  Q
    ||||||| ||||||||||||| |||||| |||| ||||||||| ||||||| ||| ||||||| |||| ||||||| | |||||||  ||||||||||    
T  6472325 attaaaacgagggtataatagaaaaaaaatgtgtaaaaatacattttgctaatttagtgttaatattccaaaacgataattaaaaataaacggaggga 6472228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 12568923 - 12569015
Alignment:
Q  10 agggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    ||||||||||| ||| ||| |||||||||||||||||  ||||||| ||||||| |||| || |  |||||||||||||||  ||||||||||    
T  12568923 agggtataataagaagaaaatgtgcaaaaatacacttcactattttggtgttaatattccaacagaacacttaaaaaagaatagagggagtaa 12569015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 13545387 - 13545479
Alignment:
Q  10 agggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    ||||||||||| ||| ||| |||||||||||||||||  ||||||| ||||||| |||| || |  |||||||||||||||  ||||||||||    
T  13545387 agggtataataagaagaaaatgtgcaaaaatacacttcactattttggtgttaatattccaacagaacacttaaaaaagaatagagggagtaa 13545479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37030455 - 37030368
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgc-aaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaa 87  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||||||| |  |||||||||||||  ||||||||  ||||||||||||    
T  37030455 attaaaatgagggtatactaggaagaaaatgtgcaaaaaatacacttcgtgatttttgtgttaattttctaaaaaaacacttaaaaaa 37030368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34669213 - 34669307
Alignment:
Q  1 attaaaatgagggtataataggaaaaaag-tgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacgga 94  Q
    ||||||||||| ||||||||| ||||||  ||||||||||||||| | ||||||||  ||||||  ||| ||||  |||||||||||||||||||    
T  34669213 attaaaatgagagtataatagaaaaaaaaatgtgcaaaaatacacatcgctattttaatgttaattttccaaaaaaacacttaaaaaagaacgga 34669307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 34824239 - 34824321
Alignment:
Q  9 gagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaac 91  Q
    |||||||| |||| || ||| |||||||||||||||||  ||| ||| |||| || |||||||||||||||||||||| ||||    
T  34824239 gagggtatgatagaaagaaaatgtgcaaaaatacacttcactaatttggtgtgaatattctaaaacgacacttaaaaaggaac 34824321  T

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Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 5494159 - 5494244
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaa 90  Q
    |||||||| ||||||||||| ||| ||||||||||||||| |  |||||||||| ||||  |||||||| |||||||  |||||||    
T  5494159 aaatgaggatataataggaagaaaatgtgcaaaaatacacatcactatttttgtattaattttctaaaaagacactttgaaaagaa 5494244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6749476 - 6749574
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    ||||||| ||||||||||||| || ||| |||| ||||||||| ||||||| ||| ||||||| |||| ||||| | | |||||||  ||| |||||||    
T  6749476 attaaaacgagggtataatagaaagaaaatgtgtaaaaatacattttgctaatttagtgttaatattccaaaaccataattaaaaataaaccgagggag 6749574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34823682 - 34823612
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaa 71  Q
    ||||||| |||||||| ||||||| ||| | | ||||||||||||| |||| ||| ||||||| |||||||    
T  34823682 attaaaacgagggtatgataggaagaaaatatacaaaaatacacttcgctaatttggtgttaatattctaa 34823612  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 376281 - 376322
Alignment:
Q  35 aaaaatacactttgctatttttgtgttaaaattctaaaacga 76  Q
    |||||||||||| |||||||||||||||| ||| ||||||||    
T  376281 aaaaatacacttcgctatttttgtgttaatattataaaacga 376322  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 5482079 - 5482038
Alignment:
Q  14 tataataggaaaaaagtgtgcaaaaatacactttgctatttt 55  Q
    ||||||||||| ||| |||||||||||| |||||||||||||    
T  5482079 tataataggaagaaaatgtgcaaaaataaactttgctatttt 5482038  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 25842076 - 25842109
Alignment:
Q  68 ctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||||||||||| ||||||||||||||    
T  25842076 ctaaaacgacacttaaaaaggaacggagggagta 25842109  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 19578967 - 19579003
Alignment:
Q  57 gtgttaaaattctaaaacgacacttaaaaaagaacgg 93  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  19578967 gtgttaatattctaaaacgacacttaaaaaggaacgg 19579003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20202220 - 20202320
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  20202220 attaaaatgagggtataataggaaaaaaatgtgcaaaaatacacttagctatttttgtgttaaaattttaaaacgacacttaaaaaggaacggagggagt 20202319  T
Q  101 a 101  Q
    |    
T  20202320 a 20202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17558353 - 17558453
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17558353 attaaaatgaggatataataggaaaaatgtgtgtaaaaatacacttcgctatttttgtgttaaaattctaaaacgacacttaaaaaaaaacggagggagt 17558452  T
Q  101 a 101  Q
    |    
T  17558453 a 17558453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32717688 - 32717593
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggg 97  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  32717688 attaacatgagggtataataggaaaaaagtgtgcaaaa-tacacttcgctatttttgtgttaaaattctaaaacgacacttaaaaaggaacagaggg 32717593  T

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Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16366102 - 16366187
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||    
T  16366102 attaaaatgagggtataataggaaaaaagtttgcaaaaatacacttcactatttttgtgttaaaattcttaaacgacacttcaaaa 16366187  T

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Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36059637 - 36059554
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaa 84  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  36059637 attaaaatgagggtataataggaaaaaaatgtgaaaaaatacacttcactatttttgtgttaaaattctaaatcgacacttaaa 36059554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39585438 - 39585343
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagg 96  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||||||  |||||||| |||||||||||| |||||||||    
T  39585438 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacgtcgctattttggtgttaattttctaaaaagacacttaaaaaggaacggagg 39585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 248981 - 248881
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||| ||  ||  ||||||||||||||||||||| ||| |||||||||    
T  248981 attaaattgagggtataataggaagaaaatgtgtaaaaatacactttgctatttttatggaaattttctaaaacgacacttaaaaaggaatggagggagt 248882  T
Q  101 a 101  Q
    |    
T  248881 a 248881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37270111 - 37270211
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||| |||  ||||||||    
T  37270111 attaaattgagggtatagtaggaagaaaatgtgcaaaaatacactttgctatttttgtggaaattttctaaaacgacacttaaaaaggaatcgagggagt 37270210  T
Q  101 a 101  Q
    |    
T  37270211 a 37270211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17201963 - 17201878
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||| ||||||  |||||||| ||||||||||||    
T  17201963 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctatttttatgttaattttctaaaaagacacttaaaaa 17201878  T

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Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 14655382 - 14655470
Alignment:
Q  14 tataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgtt-aaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| ||||||| |||| ||| |||||    
T  14655382 tataataggaaaaaagtgtgcaaaaatacacttcgctatttttgtgttaaaaactctaaaatgacatttaaaaaggaacagagagagta 14655470  T

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Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28620582 - 28620681
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| |||  |||||||||||||| | | |||||  |||||||  |||||||| |||||||||||| |||||||||||||    
T  28620582 attaaaatgagggtataataggaagaaaaggtgcaaaaatacacatcgttattt--gtgttaattttctaaaaagacacttaaaaaggaacggagggagt 28620679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19804295 - 19804389
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggag 95  Q
    ||||||||||||||| |||||||| ||| ||| ||||||||||| |||||| ||| |||||||  |||||||| |||||||||||| ||| ||||    
T  19804295 attaaaatgagggtagaataggaagaaaatgtacaaaaatacacattgctaatttagtgttaattttctaaaaagacacttaaaaatgaatggag 19804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8544214 - 8544114
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||| ||| || ||| |||||||  || | ||| | |||||||||||||| |||||||||    
T  8544214 attaaaatgagggtataatatgaagaaaatgtgcaaaaatacacattgttaatttggtgttaattttttgaaaaggcacttaaaaaagaatggagggagt 8544115  T
Q  101 a 101  Q
    |    
T  8544114 a 8544114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1584235 - 1584333
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| | |||| ||| |||||||  || ||||| |||||||||||| |||  |||||||    
T  1584235 attaaaatgagggtataatagaaagaaaatgtgcaaaaatacacatcgctaatttggtgttaattttttaaaaagacacttaaaaaggaatagagggag 1584333  T

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Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6428620 - 6428709
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaa 90  Q
    |||||||||| |||||||||| || ||| ||||||||||||||| |  ||||||| |||||||  |||| ||| ||||||||||||||||    
T  6428620 attaaaatgaaggtataatagaaagaaaatgtgcaaaaatacacatcactattttggtgttaattttcttaaaagacacttaaaaaagaa 6428709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 11825259 - 11825178
Alignment:
Q  8 tgagggtataataggaa--aaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaa 87  Q
    |||||||||||||||||  ||||   ||| ||||||||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  11825259 tgagggtataataggaagaaaaaaaatgctaaaatacacttcgctatttttgtattaattttctaaaacgacacttaaaaaa 11825178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 25612795 - 25612736
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaa 64  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||| ||| ||||||||    
T  25612795 aaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctaatttggtgttaaa 25612736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 1584059 - 1584149
Alignment:
Q  12 ggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    ||||||||||||| ||| ||||||||||||||| | |||| |||  |||| |  || ||||| || |||||||| ||||||||||||||||    
T  1584059 ggtataataggaagaaaatgtgcaaaaatacacatcgctaatttgatgtttattttttaaaaagatacttaaaagagaacggagggagtaa 1584149  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32474707 - 32474749
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaataca 43  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  32474707 attaaaatgagggtataatagaaagaaaatgtgcaaaaataca 32474749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11991765 - 11991712
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctattt 54  Q
    |||||||||| |||||| |||||| ||| ||||||||||||||| | |||||||    
T  11991765 attaaaatgaaggtatattaggaagaaaatgtgcaaaaatacacatcgctattt 11991712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 19133113 - 19133037
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacactt 81  Q
    ||||||||||||||||| || ||| |||| ||| |||||||| |||| ||| ||| ||| |||| |||| |||||||    
T  19133113 aaatgagggtataatagaaagaaaatgtgtaaatatacacttcgctaatttcgtgctaatattccaaaatgacactt 19133037  T

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Target: chr6 (Bit Score: 81; Significance: 6e-38; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21527005 - 21526905
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  21527005 attaaaatgagggtgtaataggaaaaaagtgtgcaaaaatacacttcgctatttttgatttaaaattctaaaacgacacttaaaaaggaacggagggagt 21526906  T
Q  101 a 101  Q
    |    
T  21526905 a 21526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7972343 - 7972243
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  7972343 attaaaatgagggtataatagaaaaaaagtgtgcaaaaatacacttcgttatttttgtgttaaaattctaaaacgtcacttaaaaagaaacggagggagt 7972244  T
Q  101 a 101  Q
    |    
T  7972243 a 7972243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6026574 - 6026668
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggag 95  Q
    ||||||||||| ||||||||| || |||  ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  6026574 attaaaatgagagtataatagaaagaaaaagtgcaaacatacactttgctatttttgtgttaatattctaaaacgacacttaaaaaggaacggag 6026668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 8049898 - 8049995
Alignment:
Q  4 aaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||||||||||||| ||| |||||||||| |||| | |||||||| |||||||  || ||||| ||||| |||||| ||||||||||||||    
T  8049898 aaaatgagggtataataggaagaaaatgtgcaaaaacacacatcgctattttggtgttaattttttaaaaagacacataaaaaggaacggagggagta 8049995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26252094 - 26252000
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggag 95  Q
    |||||| ||||||||||||||||| ||| ||| |||||||||||||| |||||||  ||  ||  ||||||||||||||||||||| ||||||||    
T  26252094 attaaattgagggtataataggaagaaaatgtacaaaaatacactttactattttcatggaaattttctaaaacgacacttaaaaaggaacggag 26252000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8461232 - 8461309
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgaca 78  Q
    |||||||| |||||| || ||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||| ||||    
T  8461232 attaaaattagggtaaaacaggaaaaaaatgtacaaaaatacactttgctatttttatgttaatattctaaaatgaca 8461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14093295 - 14093211
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||| ||| |||||||  |||||||| || |||||||||    
T  14093295 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacattgctaatttggtgttaactttctaaaa-gatacttaaaaa 14093211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 7833478 - 7833444
Alignment:
Q  67 tctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||| |||||||||||||||||||||||||||    
T  7833478 tctaaaaagacacttaaaaaagaacggagggagta 7833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25057099 - 25057200
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||| ||||||||||||| ||| |||  |||||||| | | | ||||||  ||||||  || ||||| |||||||||||| ||||||| |||||    
T  25057099 attaaattgaaggtataataggaagaaaatgtataaaaatacccatcgttattttgatgttaattttttaaaaagacacttaaaaatgaacggacggagt 25057198  T
Q  101 aa 102  Q
    ||    
T  25057199 aa 25057200  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31656123 - 31656208
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||||||||||||| || ||| ||||  ||||||||||||  || ||| ||||||  |||| |||| ||||||| ||||    
T  31656123 attaaaatgagggtataatagaaagaaaatgtgttaaaatacactttcttaatttggtgttactattccaaaatgacacttgaaaa 31656208  T

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Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12413000 - 12413100
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||| |||    
T  12413000 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacacttcgctttttttgtgttaaaattctaaaacgacacttaaaaaggaacagaggaagt 12413099  T
Q  101 a 101  Q
    |    
T  12413100 a 12413100  T

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Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12425060 - 12425160
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||| |||    
T  12425060 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacacttcgctttttttgtgttaaaattctaaaacgacacttaaaaaggaacagaggaagt 12425159  T
Q  101 a 101  Q
    |    
T  12425160 a 12425160  T

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Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4959063 - 4958966
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggga 98  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||    
T  4959063 attaaaatgagggtataataggaaaaaagtgtgcaaagatacactttgctattttagtgttaaaactctaaaacaacacttaaaaaggaacggaggga 4958966  T

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Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34424462 - 34424362
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  34424462 attaaaataagggtataatagaaaaaaagtgtgtaaaaatacacttcgctatttttgtgttaaaattttaaaacgacacttaaaaaggaacggatggagt 34424363  T
Q  101 a 101  Q
    |    
T  34424362 a 34424362  T

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Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20170998 - 20170893
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||   |||||| |||||||||||||||||||| | |||||||||||||    
T  20170998 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacttcgctatttcaatgttaatattctaaaacgacacttaaagaggaacggagggagt 20170899  T
Q  101 aaattg 106  Q
    | ||||    
T  20170898 atattg 20170893  T

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Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7485780 - 7485679
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||| |||||||||||||||| |||  ||||||||| ||||||||||||| ||||||||||||||||||  |||| ||| |||||||||||||    
T  7485780 attaaaatgagagtataataggaaaaaaatgtctaaaaatacattttgctatttttgagttaaaattctaaaacgatccttacaaaggaacggagggagt 7485681  T
Q  101 aa 102  Q
    ||    
T  7485680 aa 7485679  T

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Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33660661 - 33660760
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||| ||||||||  || |||  |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |||||    
T  33660661 attaaaatgagagtataatacaaagaaaaggtgcaaaaatacactttgctatttttgtattaatattctaaaacgacacttaaaaaggaacggatggagt 33660760  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27747021 - 27747112
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacgga 94  Q
    ||||||||||||||||||||| |||||||||  ||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  27747021 attaaaatgagggtataatagaaaaaaagtg--caaaaatatgcttagctatttttgttttaaaattctaaaacgacacttaaaaaggaacgga 27747112  T

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Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15507990 - 15508083
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacgga 94  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| || |||||||| | ||||| || ||||||||||||||||||| |||||||    
T  15507990 attaaaatgaaggtataataggaagaaagtgagcaaaaatacaattcgctattttggcgttaatatactaaaacgacacttaaaaaggaacgga 15508083  T

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Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1398015 - 1398115
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||| | |||||||| |||||||  ||||||||  ||||||| ||| |||||||||||||    
T  1398015 attaaaatgagggtataattggaagaaaatgtgcaaaaatacacatcgctattttggtgttaattttctaaaaaaacacttacaaatgaacggagggagt 1398114  T
Q  101 a 101  Q
    |    
T  1398115 a 1398115  T

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Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 42871988 - 42871889
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||| ||||||| ||| | ||||||||||||||| ||||||||  |||||  |||||||||||||||||||||| |||  ||||||||    
T  42871988 attaaaatgagggtatgataggaagaaaatatgcaaaaatacacttcgctattttgatgttagtattctaaaacgacacttaaaaaggaaatgagggagt 42871889  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41541707 - 41541792
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||| ||||||||||||||| ||| | ||||||| ||||||||| |||||| ||||||| |||||||||| ||| |||||||    
T  41541707 attaaaataagggtataataggaagaaaatatgcaaaagtacactttgttattttggtgttaatattctaaaacaacaattaaaaa 41541792  T

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Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25713577 - 25713477
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| |||   || |||||||||||| | |||||| ||||||| ||| |||||||||| ||||||| ||| ||| |||||    
T  25713577 attaaaatgagggtataataggaagaaaaactgaaaaaatacacttcgttattttagtgttaatattttaaaacgacatttaaaaaggaatggaaggagt 25713478  T
Q  101 a 101  Q
    |    
T  25713477 a 25713477  T

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Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11084432 - 11084517
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||||||| ||| |||  ||||| ||||||| |||||||  |||||| |||| |||| ||||||||||||    
T  11084432 attaaaatgagggtataataggaagaaaatgtataaaaacacactttactattttgatgttaatattccaaaatgacacttaaaaa 11084517  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16806120 - 16806023
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggga 98  Q
    |||||||| ||||||||||||||| |||  |||||||||||||| |  ||||||| || ||||  |||||||| |||||||||||| ||| |||||||    
T  16806120 attaaaattagggtataataggaagaaaacgtgcaaaaatacacatcactattttggttttaattttctaaaaagacacttaaaaaggaatggaggga 16806023  T

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Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16845401 - 16845304
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggga 98  Q
    |||||||| ||||||||||||||| |||  |||||||||||||| |  ||||||| || ||||  |||||||| |||||||||||| ||| |||||||    
T  16845401 attaaaattagggtataataggaagaaaacgtgcaaaaatacacatcactattttggttttaattttctaaaaagacacttaaaaaggaatggaggga 16845304  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29408415 - 29408315
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| | | |||||| |||||||  ||||||||  ||| ||||||| ||||| | |||||    
T  29408415 attaaaatgagggtataatagaaagaaaatgtgcaaaaatacacatcgttattttggtgttaattttctaaaaaaacatttaaaaaggaacgaatggagt 29408316  T
Q  101 a 101  Q
    |    
T  29408315 a 29408315  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 36243598 - 36243499
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| |||   || ||||||||| || | |||||| |||||||||||||||||  |||||||||||  ||||||| ||||    
T  36243598 attaaaatgagggtataataggaataaaaaatg-aaaaatacatttcgttattttagtgttaaaattctaaaattacacttaaaaataaacggagagagt 36243500  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 157692 - 157605
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaag 88  Q
    |||||||||||| ||||||||||| ||| |||| ||||||| ||||||||| |||   ||||| |||||||| ||| |||||||||||    
T  157692 attaaaatgaggatataataggaagaaaatgtgtaaaaatatactttgctaatttaacgttaatattctaaagcgagacttaaaaaag 157605  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3309493 - 3309450
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacac 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  3309493 attaaaatgagggtataataggaagaaaatgtgcaaaaatacac 3309450  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44898717 - 44898802
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||||||||||||| || ||| |||| | |||||||||| |||| ||| ||| ||| |||| ||||| |||||| ||||    
T  44898717 attaaaatgagggtataatagaaataaaatgtgtagaaatacacttcgctaatttggtgctaatattccaaaaccacacttcaaaa 44898802  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 42758136 - 42758176
Alignment:
Q  62 aaaattctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  42758136 aaaattctaaaacgacactgaaaaaggaacggagggagtaa 42758176  T

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Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39434485 - 39434586
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgtt-aaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  39434485 attaaaataagggtataataggaaaaaagtgtgcaaaaatacacttcgctatttttgtattaaaaattctaaaacgacacttaaaaaggaacggagggag 39434584  T
Q  100 ta 101  Q
    ||    
T  39434585 ta 39434586  T

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Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4962636 - 4962536
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  4962636 attaaaatgagggtataataggaaaaaagtgtgaaaaaatacatttcactatttttgtgttaaaattctaaaacggcacttaaaaaggaacggagggagt 4962537  T
Q  101 a 101  Q
    |    
T  4962536 a 4962536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14771116 - 14771015
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaac-gacacttaaaaaagaacggagggag 99  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  14771116 attaaaatgagggtataatagagaaaaagtgtgtaaaaatacactttactatttttgtgttaaaattctaaaactgacacttaaaaaggaacggagggag 14771017  T
Q  100 ta 101  Q
    ||    
T  14771016 ta 14771015  T

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Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15221568 - 15221467
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaac-gacacttaaaaaagaacggagggag 99  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  15221568 attaaaatgagggtataatagagaaaaagtgtgtaaaaatacactttactatttttgtgttaaaattctaaaactgacacttaaaaaggaacggagggag 15221469  T
Q  100 ta 101  Q
    ||    
T  15221468 ta 15221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 46671719 - 46671618
Alignment:
Q  2 ttaaaatgagggtataataggaaaaaagt-gtgcaaaaatacactttgctatttttgtgttaaaa-ttctaaaacgacacttaaaaaagaacggagggag 99  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  46671719 ttaaaatgagggtataataggaaaaaaattgtgcaaaaataccctttgctatttttgtgttaaaaattctaaaacgacacttaaaaaggaacggagggag 46671620  T
Q  100 ta 101  Q
    ||    
T  46671619 ta 46671618  T

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Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25291007 - 25291108
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgtt-aaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    |||||||||||| |  ||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  25291007 attaaaatgaggatccaataggaaaaatgcgtgcaaaaatacacttcgctatttttgtgttaaaaattctaaaacgacacttaaaaaggaacggagggag 25291106  T
Q  100 ta 101  Q
    ||    
T  25291107 ta 25291108  T

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Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39430015 - 39429912
Alignment:
Q  1 attaaaatgagggtataataggaaaaaa---gtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggg 97  Q
    |||||||| |||||||||||| ||||||   |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||| |    
T  39430015 attaaaataagggtataatagaaaaaaaaaagtgtgcaaaaatacacttcgctatttttgtgttaaaattataaaatgacacttaaaaatgaacggagag 39429916  T
Q  98 agta 101  Q
    ||||    
T  39429915 agta 39429912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15643690 - 15643774
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  15643690 attaaaatgagggtataatcgtaaaaaa-tgtgcaaaaatacacttaactatttttgtgttaaatttctaaaacgacacttaaaaa 15643774  T

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Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33258954 - 33259047
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacgga 94  Q
    |||||||||||||||||||||||| ||| | | ||||||||||||| | |||||| ||||||| |||||||||||||||||||||| |||||||    
T  33258954 attaaaatgagggtataataggaagaaaatctacaaaaatacacttcgttattttggtgttaatattctaaaacgacacttaaaaaggaacgga 33259047  T

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Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16197386 - 16197487
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| |  ||||||| |||||||  |||||||| |||||||||||| ||| |||||||||    
T  16197386 attaaaatgagggtataatagaaagaaaatgtgcaaaaatacacatcactattttggtgttaattttctaaaaagacacttaaaaaggaatggagggagt 16197485  T
Q  101 aa 102  Q
    ||    
T  16197486 aa 16197487  T

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Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2271424 - 2271324
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||| | |||||||| |||||||  | |||||| ||||||||||||  ||||||||||||    
T  2271424 attaaaatgaggatataataggaagaaaatgtgcaaaaatacacatcgctattttggtgttaatttcctaaaaagacacttaaaaagaaacggagggagt 2271325  T
Q  101 a 101  Q
    |    
T  2271324 a 2271324  T

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Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27723814 - 27723915
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| | |  ||||||| || | |||||||| |||||||  |||||||||||||||| |||| |||||||||||||    
T  27723814 attaaaatgagggtataataggaagaaaatatttaaaaatatacatcgctattttggtgttaattttctaaaacgacacttcaaaaggaacggagggagt 27723913  T
Q  101 aa 102  Q
    ||    
T  27723914 aa 27723915  T

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Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17270145 - 17270246
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||| |||||||||| ||||| |||| ||||| ||||||   |||||| || ||||  ||||||||||||||||||||| ||||| |||||||    
T  17270145 attaaaatgagagtataatagggaaaaaatgtgtaaaaacacacttcattattttggtattaattttctaaaacgacacttaaaaaggaacgaagggagt 17270244  T
Q  101 aa 102  Q
    ||    
T  17270245 aa 17270246  T

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Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 35792588 - 35792491
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattct-aaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||  |||| ||||  |||| ||| || ||||||||||||||    
T  35792588 aaatgagggtataataggaaaaaaatatgcaaaaatacacatcgctatttttgtgttaattttctaaaaaaaacacataagaaggaacggagggagta 35792491  T

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Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28226851 - 28226951
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||| |||||||||||||||  ||   | ||||||||||| | |||| ||| ||||||| |||| ||||||||||||||||| |||||||||||||    
T  28226851 attaaaataagggtataataggaagtaaagatacaaaaatacacatcgctaatttggtgttaatattccaaaacgacacttaaaaatgaacggagggagt 28226950  T
Q  101 a 101  Q
    |    
T  28226951 a 28226951  T

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Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4678915 - 4679008
Alignment:
Q  1 attaaaatgagggtataatagga---aaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaac 91  Q
    |||||||||||| ||||||| ||   |||||  ||| |||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||    
T  4678915 attaaaatgaggatataataagagaaaaaaaaagtgtaaaaatacacttcgctatttttgtgttaaaattataaaatgacacttaaaaaggaac 4679008  T

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Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37124714 - 37124799
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||| ||||||||||||||| ||| |||||||||| |||| ||||||||||  || |||  |||||||| ||||||||||||    
T  37124714 attaaaatcagggtataataggaagaaaatgtgcaaaaacacacattgctattttgatgctaattttctaaaaagacacttaaaaa 37124799  T

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Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39618226 - 39618314
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaaga 89  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |   ||||||| ||||||  |||||||| ||||| | |||||||    
T  39618226 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacatctatatttttatgttaattttctaaaaagacacatgaaaaaga 39618314  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1752137 - 1752037
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||| ||||||||||||||| || ||| |||| ||||||||||||   ||  || ||||||  |||| ||||| |||||||||||||||||||| ||||    
T  1752137 attaacatgagggtataatagaaagaaaatgtgaaaaaatacacttccttaaattggtgttattattccaaaacaacacttaaaaaagaacggagtgagt 1752038  T
Q  101 a 101  Q
    |    
T  1752037 a 1752037  T

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Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 24393730 - 24393682
Alignment:
Q  53 ttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||||    
T  24393730 ttttgtgttaaatttctaaaacgacacttaaaaagaaacggagggagta 24393682  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10534508 - 10534415
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggag 95  Q
    |||||||||| |||||||||  ||||||  |||||||||||||| | | |||||| |||||||  |||||||| |||| ||||||| ||||||||    
T  10534508 attaaaatgaaggtataataaaaaaaaaa-gtgcaaaaatacacatcgttattttggtgttaattttctaaaaagacatttaaaaaggaacggag 10534415  T

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Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 39599376 - 39599314
Alignment:
Q  30 tgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacg 92  Q
    ||||||||||| ||||| |||| ||| ||||||| ||||| |||||||| |||||||||||||    
T  39599376 tgtgcaaaaattcacttcgctaatttcgtgttaatattcttaaacgacatttaaaaaagaacg 39599314  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 27062059 - 27061974
Alignment:
Q  2 ttaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaa 87  Q
    ||||| ||||||||||| || || ||| | |||||||||| ||||   || |||||||||| ||||| ||||||||||||||||||    
T  27062059 ttaaattgagggtataacagaaagaaaatatgcaaaaatatacttccttaattttgtgttacaattccaaaacgacacttaaaaaa 27061974  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12394787 - 12394887
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||| |||||||||||| ||| ||||||||||| ||| |   |||||| ||||| |  |||||||| ||||||||  || ||||||||| |||    
T  12394787 attaaaatgagagtataataggaagaaaatgtgcaaaaatgcacatcattattttggtgttcattttctaaaaagacacttaggaaggaacggaggaagt 12394886  T
Q  101 a 101  Q
    |    
T  12394887 a 12394887  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 43369113 - 43369176
Alignment:
Q  31 gtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggag 95  Q
    |||||||| ||||||||  || ||| ||||||| |||||||||||||||||||||| ||||||||    
T  43369113 gtgcaaaattacactttt-taatttggtgttaatattctaaaacgacacttaaaaaggaacggag 43369176  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 35793254 - 35793288
Alignment:
Q  68 ctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    |||||| ||||||||||||||||||||||||||||    
T  35793254 ctaaaaagacacttaaaaaagaacggagggagtaa 35793288  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4567918 - 4568003
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||||||||||||| || | |  ||| |||||||||||  ||||||||  ||||||  |||||||| |||| |||||||    
T  4567918 attaaaatgagggtataatagaaagataacgtgtaaaaatacactgcgctattttgatgttaattttctaaaaagacatttaaaaa 4568003  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2798903 - 2799003
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaa-aaaagaacggagggag 99  Q
    |||| ||| |||||||||||||||  ||   |||||||||||||||  ||| ||| ||||||| |||  ||||||||| |||| |||| |||||||||||    
T  2798903 attagaataagggtataataggaagtaaagatgcaaaaatacacttcactaatttggtgttaatatttcaaaacgacatttaagaaaaaaacggagggag 2799002  T
Q  100 t 100  Q
    |    
T  2799003 t 2799003  T

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Target: chr8 (Bit Score: 74; Significance: 9e-34; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9455619 - 9455715
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggga 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||    
T  9455619 attaaaatgagggtataatag-aaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattttaaaatgacacttaaaaagaaacggaggga 9455715  T

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Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3443405 - 3443319
Alignment:
Q  1 attaaaatgagggtataataggaaaaaa-gtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  3443405 attaaaatgagggtataataggaaaaaaagtgtgcaaaaatacacttcgctatttttgtgttaaaattctaaaacgacgcttaaaaa 3443319  T

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Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29315321 - 29315218
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||    
T  29315321 attaaattgagggtataataggaagaaaatgtgcaaatatacactttgctattttcatggaaattttctaaaacgacacttaaaaaagaacggagggagt 29315222  T
Q  101 aaat 104  Q
    ||||    
T  29315221 aaat 29315218  T

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Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 7577905 - 7577822
Alignment:
Q  9 gagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacg 92  Q
    |||||||||||||  |||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||    
T  7577905 gagggtataatagagaaaaggtgtgcaaaaatacacttagctatttttatgttaaaattctaaaacgacgcttaaaaaggaacg 7577822  T

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Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 35970162 - 35970069
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacgga 94  Q
    ||||||| |||||||| ||||||| ||| |||||||||||||||||||||| ||| ||||||| |||||||||||| | ||||||| |||||||    
T  35970162 attaaaacgagggtatgataggaagaaaatgtgcaaaaatacactttgctaatttggtgttaatattctaaaacgatagttaaaaaggaacgga 35970069  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36683452 - 36683552
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||  ||  ||  ||||||||| ||||||||||  |||||||||||||    
T  36683452 attaaattgagggtataataggaagaaaatgtgcaaaaatacactttgctattttcatggaaattttctaaaacaacacttaaaagggaacggagggagt 36683551  T
Q  101 a 101  Q
    |    
T  36683552 a 36683552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 13385441 - 13385532
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagg 96  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||  || ||||||||||  |||| |||||||||||||||||||||||||||    
T  13385441 aaatgagggtataataggaagaaaatgtgtaaatatacactttcttaattttgtgttactattccaaaacgacacttaaaaaagaacggagg 13385532  T

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Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34039415 - 34039515
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||| |||| || ||||| || ||| |||| ||||||||||||   ||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  34039415 attaaaacgaggataaaatagaaagaaaatgtgtaaaaatacacttcattatttttgtgttaaaattctaaaacgacatttaaaaaggaaaggagggagt 34039514  T
Q  101 a 101  Q
    |    
T  34039515 a 34039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 32234228 - 32234324
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||||||||||||| ||| ||| ||||||||||| | ||||||||  ||| ||  ||||||||  ||||||||||| ||||||||||||||    
T  32234228 aaatgagggtataataggaagaaaatgtacaaaaatacacatcgctattttgatgtaaattttctaaaaaaacacttaaaaaggaacggagggagta 32234324  T

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Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38402072 - 38402161
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacg 92  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||  |||| || |||||||| |||||||||||| |||||    
T  38402072 attaaaatgagggtataatagaaagaaa-tgtgcaaaaatacacattgctattttgatgtt-aatttctaaaaagacacttaaaaaggaacg 38402161  T

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Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 2742583 - 2742535
Alignment:
Q  53 ttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  2742583 ttttgtgttaaaattctaaaacgactcttcaaaaagaacggagggagta 2742535  T

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Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1256321 - 1256236
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||| || |||||||||| ||||| |||||||||||||||  ||||| ||  |||||||  |||||||| ||||||||||||    
T  1256321 attaaaattagagtataatagggaaaaaatgtgcaaaaatacacaatgctaattcggtgttaattttctaaaaagacacttaaaaa 1256236  T

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Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3742270 - 3742370
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| |||||||||||||  || ||| ||||||||||||||||||| ||||||||||  ||  ||| ||||||||| | ||||| |||||| ||||||    
T  3742270 attaaattgagggtataataaaaagaaaatgtgcaaaaatacactttgttatttttgtggaaattttcgaaaacgacattaaaaaaggaacgg-gggagt 3742368  T
Q  101 aa 102  Q
    ||    
T  3742369 aa 3742370  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 104
Target Start/End: Original strand, 12249004 - 12249034
Alignment:
Q  74 cgacacttaaaaaagaacggagggagtaaat 104  Q
    |||||||||||||||||||||||||||||||    
T  12249004 cgacacttaaaaaagaacggagggagtaaat 12249034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14897109 - 14897163
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttt 55  Q
    ||||||||||||| ||||||| || ||| ||||||||||||||||| ||| ||||    
T  14897109 attaaaatgagggcataatagaaagaaaatgtgcaaaaatacacttcgctctttt 14897163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 29316036 - 29316070
Alignment:
Q  68 ctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  29316036 ctaaaacgacacttaaaaaggaacggagggagtaa 29316070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27232211 - 27232309
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||  ||| ||| ||| ||||| ||||| | |||| ||| |  ||||  ||||||||  ||||||||||| |||||||||||||    
T  27232211 attaaaatgagggtataat--gaagaaaatgtacaaaagtacacatcgctaatttgggtttaattttctaaaaaaacacttaaaaaggaacggagggagt 27232308  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34146806 - 34146851
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactt 46  Q
    ||||||||||||||||||||| || ||| |||| ||||||||||||    
T  34146806 attaaaatgagggtataatagaaagaaaatgtgtaaaaatacactt 34146851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5871376 - 5871476
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||| ||||||||||||| ||| |||| ||||||| || | |||| |||  | ||||  || ||||| |||||||||||| || |||||| |||    
T  5871376 attaaaatgaaggtataataggaagaaaatgtgtaaaaatatacatcgctaatttgatattaattttttaaaaagacacttaaaaaggagcggaggaagt 5871475  T
Q  101 a 101  Q
    |    
T  5871476 a 5871476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38433927 - 38433826
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||| | |||||    
T  38433927 attaaaatgagggtataataggaaaaaagtttgcaaaaatatacttcgctatttttgtgttaaaattttaaaacgacacttaaaaaggaacgaatggagt 38433828  T
Q  101 aa 102  Q
    ||    
T  38433827 aa 38433826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37371108 - 37371006
Alignment:
Q  1 attaaaatgagggtataataggaaaaaa--gtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggga 98  Q
    |||||| |||||||||||||| ||||||  |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  37371108 attaaattgagggtataatagaaaaaaaaagtgttcaaaaatacacttcactatttttgtgttaaaattctaaaacgacacttaaaaaggaacggatgga 37371009  T
Q  99 gta 101  Q
    |||    
T  37371008 gta 37371006  T

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Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 55344118 - 55344204
Alignment:
Q  1 attaaaatgagggtataataggaaaaaag-tgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    |||||||||||||||||||| |||||||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  55344118 attaaaatgagggtataatatgaaaaaaaatgtgcaaaaatacatttcgctatttttgtgttaaaattctaaaacgacacttaaaaa 55344204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 24537979 - 24537900
Alignment:
Q  13 gtataataggaaaaaa-gtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaac 91  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  24537979 gtataataggaaaaaaagtgtgcaaaaatacacttcgctatttttatgttaaaattctaaaacgacacttaaaaaggaac 24537900  T

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Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17330952 - 17331053
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||| |||||||  |||||||| ||||||| |||| ||||||||| |||    
T  17330952 attaaaattagggtataataggaagaaaatgtgcaaaaatacacattgctattttggtgttaattttctaaaaagacacttcaaaaggaacggaggaagt 17331051  T
Q  101 aa 102  Q
    ||    
T  17331052 aa 17331053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9088831 - 9088730
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||| | |||||||| |||||||  |||||||| || ||||||||| |||||||| ||||    
T  9088831 attaaaatgagggtataataggaagaaaatgtgcaagaatacacatcgctattttagtgttaatgttctaaaaagatacttaaaaaggaacggagagagt 9088732  T
Q  101 aa 102  Q
    ||    
T  9088731 aa 9088730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49299407 - 49299306
Alignment:
Q  1 attaaaatgagggtataatagg-aaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    ||||||||||||||||||| || ||||||  |||||||||||||| | ||||||||||||||||  |||||||| |||||||||||| || |||||||||    
T  49299407 attaaaatgagggtataattgggaaaaaaaagtgcaaaaatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaaggagcggagggag 49299308  T
Q  100 ta 101  Q
    ||    
T  49299307 ta 49299306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1821157 - 1821057
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||||||  || ||||| |||||||||||| |||  ||||||||    
T  1821157 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctattttggtgttaattttttaaaaagacacttaaaaaggaatagagggagt 1821058  T
Q  101 a 101  Q
    |    
T  1821057 a 1821057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47944046 - 47943946
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||||||  || ||||| |||||||| ||| ||| |||||||||    
T  47944046 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctattttggtgttaattttttaaaaagacacttacaaaggaatggagggagt 47943947  T
Q  101 a 101  Q
    |    
T  47943946 a 47943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49263604 - 49263690
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaa 87  Q
    |||||||| ||||| ||||||||| ||| ||||||||||||||||| |||||||| |||||||  |||||||| |||||||||||||    
T  49263604 attaaaatcagggtctaataggaagaaaatgtgcaaaaatacacttcgctattttggtgttaattttctaaaaagacacttaaaaaa 49263690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19443132 - 19443032
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| |||||||||||| || | | ||| || || ||||  |||||||| |||||||||||| |||||||||||||    
T  19443132 attaaaatgagggtataataggaagaaaatgtgcaaaaatatacatcgttatcttggtattaattttctaaaaagacacttaaaaaggaacggagggagt 19443033  T
Q  101 a 101  Q
    |    
T  19443032 a 19443032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33890139 - 33890241
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||| ||||||||||||||||| ||| | || |||||||||||||| |||||| ||   ||  || |||||||||||||||||| |||||||||||||    
T  33890139 attaaattgagggtataataggaagaaaatatgtaaaaatacactttgttattttcgtagaaattttttaaaacgacacttaaaaaggaacggagggagt 33890238  T
Q  101 aaa 103  Q
    |||    
T  33890239 aaa 33890241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9808153 - 9808252
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||| ||||||||||| ||| |||| |||||||||| | |||||||| |||||||  |||||||| |||| ||||||| |||||||||||||    
T  9808153 attaaaatgaggatataataggaagaaaatgtg-aaaaatacacatcgctattttggtgttaattttctaaaa-gacatttaaaaaggaacggagggagt 9808250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37209630 - 37209530
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||| || |||| ||||||| ||| ||| ||||||||||| | |||||||| ||| |||  |||||||| |||||||||||| |||||||||||||    
T  37209630 attaaaataagagtatgataggaagaaaatgtacaaaaatacacatcgctattttggtggtaattttctaaaaagacacttaaaaaggaacggagggagt 37209531  T
Q  101 a 101  Q
    |    
T  37209530 a 37209530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41503096 - 41503196
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctattttt-gtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||  ||  || ||||| |||||||||||| |||  |||||||    
T  41503096 attaaattgagggtataataggaagaaaatgtgcaaaaatacactttgctatttttcgtggaaattttttaaaatgacacttaaaaaggaatcgagggag 41503195  T
Q  100 t 100  Q
    |    
T  41503196 t 41503196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 45666841 - 45666941
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||| ||  || ||||| |||||||| |||  |||| |||||||    
T  45666841 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctattttggtgtgaattttttaaaaagacacttataaagaaacgaagggagt 45666940  T
Q  101 a 101  Q
    |    
T  45666941 a 45666941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53370138 - 53370054
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaa 85  Q
    |||| ||||| ||||||||||||| |||  |||||||||||||||||  |||||||||||||| |||| ||||||||| ||||||    
T  53370138 attagaatgatggtataataggaataaaaggtgcaaaaatacactttattatttttgtgttaatattcaaaaacgacatttaaaa 53370054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38044332 - 38044231
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||  ||| |||| ||| ||| ||||||||||||||| ||||||||||| ||||||  || |||||  |||||||||||  ||||||||||||    
T  38044332 attaaaatgaaagtacaataagaagaaaatgtgcaaaaatacacattgctatttttatgttaattttttaaaaaaacacttaaaaagaaacggagggagt 38044233  T
Q  101 aa 102  Q
    ||    
T  38044232 aa 38044231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45635004 - 45634927
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgaca 78  Q
    ||||||||||||||||||||| |||||  ||| ||||||| || || |||||||||||||| |||| |||||||||||    
T  45635004 attaaaatgagggtataatagtaaaaatatgtacaaaaatgcagttcgctatttttgtgttcaaatactaaaacgaca 45634927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 54982242 - 54982141
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||||| ||||||| || |||  |||||||||||||| |  |||||||  ||||||  |||||||| ||||||||||||| || |||||||||    
T  54982242 attaaaatgagggcataatagaaagaaaacgtgcaaaaatacacatcactattttgatgttaattttctaaaaagacacttaaaaaataatggagggagt 54982143  T
Q  101 aa 102  Q
    ||    
T  54982142 aa 54982141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24073419 - 24073335
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaa 85  Q
    ||||||| ||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||||  |||||| | ||| |||||||    
T  24073419 attaaaacgagagtatattaggaagaaaatgtgcaaaaatacactttgctattttggtgttaattttctaagaagacgcttaaaa 24073335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34031554 - 34031469
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattct-aaaacgacacttaaaa 85  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |  ||||||| || ||||  |||| |||| |||||||||||    
T  34031554 attaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcactattttggtcttaattttctaaaaaagacacttaaaa 34031469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 46430487 - 46430386
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    ||||||||||| || ||||||||| ||| | | ||||||||||| | | |||||| |||||||  || ||||| ||||||||||| | ||||||||||||    
T  46430487 attaaaatgagagtgtaataggaagaaaatattcaaaaatacacatcgttattttggtgttaattttttaaaaagacacttaaaagaaaacggagggagt 46430388  T
Q  101 aa 102  Q
    ||    
T  46430387 aa 46430386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 23674208 - 23674124
Alignment:
Q  2 ttaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||| ||| ||| |||||   |||  |||||||||||||||||    
T  23674208 ttaaaataagggtataatatgaaggaagtgtgcaaaaatacacttttctaatttagtgttgctatttcaaaacgacacttaaaaa 23674124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 50721473 - 50721569
Alignment:
Q  5 aaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||| ||||||||||||||| ||| ||| |||||||| || |||||||||| |||||||  || |||||  | |||||||||  |||||||||||||    
T  50721473 aaataagggtataataggaagaaaatgtacaaaaatatacattgctattttggtgttaattttttaaaataatacttaaaaagaaacggagggagta 50721569  T

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Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 6949563 - 6949651
Alignment:
Q  13 gtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||||| ||| ||| ||||||||||| | | || ||| |||||||  ||||||||  ||||||||||| ||||| ||||||||    
T  6949563 gtataataggaagaaaatgtacaaaaatacacatcgttaatttggtgttaattttctaaaaatacacttaaaaaggaacgaagggagta 6949651  T

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Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 8077831 - 8077787
Alignment:
Q  58 tgttaaaattctaaaacgacacttaaaaaagaacggagggagtaa 102  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||    
T  8077831 tgttaaaattctaaaacgacacttaaaaaggaatggatggagtaa 8077787  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 668197 - 668230
Alignment:
Q  68 ctaaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||||||||||||||||| ||||||||||||||    
T  668197 ctaaaacgacacttaaaaaggaacggagggagta 668230  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26625674 - 26625573
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||| | |||||||||||||  ||| |||||||||||||||| | ||  || ||||||| |||  |||| ||| |||||||| ||||| || ||||    
T  26625674 attaaaataaaggtataataggaagtaagagtgcaaaaatacacttcgataacttggtgttaatatttcaaaatgacccttaaaaaggaacgaagagagt 26625575  T
Q  101 aa 102  Q
    ||    
T  26625574 aa 26625573  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 38839972 - 38839883
Alignment:
Q  12 ggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||| || ||| |||||||||||| || | ||| |||| |||||||  || | |||  ||||||||||| ||||||||||||||    
T  38839972 ggtataatagaaagaaaatgtgcaaaaatatacatcgctgttttggtgttaagttttttaaaaaacacttaaaaaggaacggagggagta 38839883  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 46196526 - 46196595
Alignment:
Q  12 ggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacactt 81  Q
    ||||||||||||| ||| | ||||||||||||| | |||||||| |||||||  || ||||| |||||||    
T  46196526 ggtataataggaagaaaatatgcaaaaatacacctcgctattttggtgttaattttataaaaagacactt 46196595  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 17330772 - 17330740
Alignment:
Q  69 taaaacgacacttaaaaaagaacggagggagta 101  Q
    ||||| |||||||||||||||||||||||||||    
T  17330772 taaaaagacacttaaaaaagaacggagggagta 17330740  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53393906 - 53393978
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaa 73  Q
    |||||||| || ||| |||| ||| ||| ||||||||||||||| | |||| |||||||||||  ||||||||    
T  53393906 attaaaataagagtagaatatgaagaaaatgtgcaaaaatacacctcgctagttttgtgttaattttctaaaa 53393978  T

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Target: scaffold1130 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 765 - 866
Alignment:
Q  1 attaaaatgagggtataataggaaaa-aagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggag 99  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  765 attaaattgagggtataataggaaaaaaagtgtgcaaaaatacacttttttatttttatgttaaaattataaaacgacacttaaaaaggaacggagggag 864  T
Q  100 ta 101  Q
    ||    
T  865 ta 866  T

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Target: scaffold0006 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 46000 - 45906
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggaggg 97  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  46000 attaaattgagggtacaataggaaaaaagtgtgcaaaaatacatttt--tatttttttgttaaaattctaaaacgacacttaaaaaggaaaggaggg 45906  T

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Target: scaffold0005 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 271946 - 271856
Alignment:
Q  1 attaaaatgagggtataataggaa-----aaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||||||||||||| ||     ||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  271946 attaaaatgagggtataatagaaaggaaaaaaaaagtgcaaaattacactttgctatttctgtgttaaaattctaaaacgacacttaaaaa 271856  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 257321 - 257383
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaa 63  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||| | |||||||| |||||||    
T  257321 attaatatgagggtataataggaagaaaatgtgtaaaaatacacatcgctattttcgtgttaa 257383  T

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Target: scaffold0841 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3915 - 3815
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 100  Q
    |||||||||||||||||||||||| |||   || |||||||||||| | |||||| ||||||| ||| |||||||||| ||||||| ||| ||| |||||    
T  3915 attaaaatgagggtataataggaagaaaaactgaaaaaatacacttcgttattttagtgttaatattttaaaacgacatttaaaaatgaatggaaggagt 3816  T
Q  101 a 101  Q
    |    
T  3815 a 3815  T

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Target: scaffold0841; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 5081 - 5174
Alignment:
Q  8 tgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagta 101  Q
    |||||||||||||||||  ||   || ||||||| |||||| |||||| ||||||| ||| |||||||||| ||||||||||| ||| ||||||    
T  5081 tgagggtataataggaaggaaaactgaaaaaatatactttgttattttagtgttaatattttaaaacgacatttaaaaaagaatggaaggagta 5174  T

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Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5682 - 5628
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttt 55  Q
    |||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||    
T  5682 attaaaatgatggtataattggaagaaaatgtgcaaaaatacactttgctatttt 5628  T

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Target: scaffold0097 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48570 - 48479
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattct---aaaacgacacttaaaaaagaa 90  Q
    |||||||||||||||||||| ||||||| |||| ||||||||| ||    |||||||||||||||||||   |||| ||||||||||||||||    
T  48570 attaaaatgagggtataata-gaaaaaaatgtgtaaaaatacaattcataatttttgtgttaaaattctttaaaaatgacacttaaaaaagaa 48479  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 184597 - 184639
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaataca 43  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  184597 attaaaatgagggtataatagaaaaaaaatgtgcaaaaataca 184639  T

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Target: scaffold1327 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1309 - 1394
Alignment:
Q  1 attaaaatgagggtataataggaaaaaagtgtgcaaaaatacactttgctatttttgtgttaaaattctaaaacgacacttaaaaa 86  Q
    ||||||||||| | |||||||||| ||| ||| ||||||||||| |||||||| | |||||||  || ||||| || |||||||||    
T  1309 attaaaatgagagcataataggaagaaaatgtacaaaaatacacattgctattctggtgttaattttttaaaaagatacttaaaaa 1394  T

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