View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8981_low_127 (Length: 429)

Name: NF8981_low_127
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8981_low_127
NF8981_low_127
[»] chr6 (10 HSPs)
chr6 (1-399)||(3705540-3705939)
chr6 (50-250)||(7693893-7694094)
chr6 (81-238)||(32658408-32658564)
chr6 (130-223)||(32977370-32977462)
chr6 (130-221)||(31743560-31743651)
chr6 (130-224)||(33755774-33755867)
chr6 (130-235)||(387759-387864)
chr6 (182-244)||(3436014-3436076)
chr6 (190-225)||(22281763-22281798)
chr6 (156-252)||(3543259-3543355)
[»] chr4 (19 HSPs)
chr4 (51-274)||(10180560-10180783)
chr4 (91-250)||(39055157-39055315)
chr4 (130-223)||(822377-822469)
chr4 (92-278)||(49211023-49211210)
chr4 (79-244)||(23359085-23359249)
chr4 (130-225)||(11347014-11347113)
chr4 (130-243)||(2396332-2396445)
chr4 (86-167)||(30865881-30865962)
chr4 (189-277)||(35308928-35309016)
chr4 (81-237)||(52199788-52199943)
chr4 (130-225)||(53096603-53096698)
chr4 (130-243)||(12447452-12447565)
chr4 (130-238)||(22628502-22628610)
chr4 (130-225)||(39629189-39629283)
chr4 (189-223)||(18743278-18743312)
chr4 (196-238)||(30865975-30866017)
chr4 (130-223)||(35331981-35332073)
chr4 (130-238)||(51655161-51655272)
chr4 (135-171)||(38593975-38594011)
[»] chr7 (25 HSPs)
chr7 (76-244)||(31330374-31330542)
chr7 (81-219)||(37698473-37698610)
chr7 (87-223)||(23156238-23156373)
chr7 (50-243)||(4958191-4958388)
chr7 (84-235)||(43302104-43302254)
chr7 (84-225)||(38360780-38360919)
chr7 (127-237)||(41015333-41015443)
chr7 (132-243)||(44441627-44441738)
chr7 (48-166)||(48767211-48767330)
chr7 (57-225)||(2008549-2008718)
chr7 (47-115)||(19753066-19753135)
chr7 (51-243)||(19987113-19987306)
chr7 (130-235)||(47841407-47841512)
chr7 (130-262)||(36481965-36482096)
chr7 (191-238)||(30859666-30859713)
chr7 (81-238)||(36656591-36656747)
chr7 (49-114)||(19594001-19594067)
chr7 (49-109)||(25324612-25324672)
chr7 (52-225)||(38223930-38224106)
chr7 (79-223)||(5513844-5513988)
chr7 (130-234)||(36657875-36657978)
chr7 (189-244)||(46748009-46748064)
chr7 (192-225)||(23801827-23801860)
chr7 (99-223)||(29914400-29914524)
chr7 (199-243)||(31322290-31322334)
[»] chr5 (10 HSPs)
chr5 (130-225)||(35463222-35463318)
chr5 (130-262)||(41520820-41520952)
chr5 (82-243)||(12593111-12593272)
chr5 (130-211)||(3558806-3558887)
chr5 (130-243)||(26675457-26675569)
chr5 (130-243)||(26947065-26947177)
chr5 (191-249)||(18396490-18396548)
chr5 (197-250)||(11200495-11200548)
chr5 (130-171)||(33133296-33133337)
chr5 (189-238)||(42951701-42951750)
[»] chr1 (21 HSPs)
chr1 (130-299)||(13984072-13984240)
chr1 (81-243)||(52353766-52353927)
chr1 (92-235)||(42831641-42831784)
chr1 (81-249)||(43822761-43822928)
chr1 (91-235)||(51263185-51263327)
chr1 (130-262)||(25813770-25813901)
chr1 (88-239)||(23333752-23333902)
chr1 (76-243)||(27544352-27544518)
chr1 (155-238)||(51504515-51504598)
chr1 (130-220)||(44665316-44665406)
chr1 (194-243)||(38902061-38902110)
chr1 (130-250)||(32851730-32851849)
chr1 (154-244)||(38600938-38601029)
chr1 (130-225)||(49003359-49003454)
chr1 (130-203)||(11566896-11566969)
chr1 (151-225)||(14775161-14775235)
chr1 (54-119)||(28278063-28278129)
chr1 (130-168)||(38118919-38118957)
chr1 (130-171)||(11569966-11570007)
chr1 (130-223)||(43506292-43506385)
chr1 (192-224)||(35615471-35615503)
[»] chr8 (27 HSPs)
chr8 (130-225)||(2603068-2603162)
chr8 (52-225)||(28540626-28540800)
chr8 (50-238)||(28557199-28557388)
chr8 (130-243)||(1155114-1155226)
chr8 (130-238)||(6519026-6519132)
chr8 (130-278)||(9604444-9604592)
chr8 (130-243)||(31226447-31226559)
chr8 (51-115)||(12733998-12734062)
chr8 (190-250)||(31128527-31128587)
chr8 (195-299)||(37673678-37673782)
chr8 (130-221)||(30714048-30714139)
chr8 (130-221)||(30721825-30721916)
chr8 (79-243)||(5535771-5535934)
chr8 (51-222)||(8673597-8673769)
chr8 (155-243)||(13629014-13629102)
chr8 (155-243)||(13729426-13729514)
chr8 (130-250)||(35468367-35468485)
chr8 (130-265)||(4797188-4797323)
chr8 (132-171)||(9790092-9790131)
chr8 (130-243)||(11777645-11777757)
chr8 (130-170)||(3628263-3628303)
chr8 (130-171)||(5139724-5139765)
chr8 (130-171)||(9134185-9134226)
chr8 (190-243)||(9135095-9135147)
chr8 (130-243)||(23036828-23036941)
chr8 (134-238)||(7288260-7288364)
chr8 (200-276)||(13079886-13079962)
[»] chr2 (16 HSPs)
chr2 (130-297)||(14772849-14773015)
chr2 (130-225)||(65388-65483)
chr2 (154-297)||(11922002-11922144)
chr2 (130-296)||(6710796-6710961)
chr2 (84-243)||(26312459-26312617)
chr2 (87-265)||(34375041-34375216)
chr2 (50-172)||(40999631-40999754)
chr2 (81-264)||(32887560-32887741)
chr2 (76-166)||(37074730-37074810)
chr2 (130-220)||(18970030-18970120)
chr2 (76-225)||(28857055-28857207)
chr2 (142-243)||(4755283-4755384)
chr2 (183-235)||(15269283-15269335)
chr2 (175-231)||(37648278-37648334)
chr2 (183-225)||(3668925-3668967)
chr2 (190-238)||(9583235-9583283)
[»] chr3 (9 HSPs)
chr3 (49-223)||(46048835-46049010)
chr3 (130-243)||(13755130-13755240)
chr3 (130-244)||(41212017-41212131)
chr3 (87-243)||(46006056-46006210)
chr3 (130-243)||(13768531-13768641)
chr3 (92-169)||(36902374-36902451)
chr3 (162-238)||(40242167-40242243)
chr3 (190-238)||(29950768-29950816)
chr3 (190-238)||(29999922-29999970)
[»] scaffold0036 (1 HSPs)
scaffold0036 (190-264)||(63644-63718)


Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 3705939 - 3705540
Alignment:
Q  1 ctaattatgtaattttatttgggagatannnnnnngggttataagattggggtctcacttaagaccatcaatcatagtgagacccacacttttttaagat 100  Q
    ||||||| ||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3705939 ctaattaggtaattttattggggagatatttttttgggttataagattggggtctcacttaagaccatcaatcatagtgagacccacacttttttaatat 3705840  T
Q  101 taaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtact 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||| ||||    
T  3705839 taaaaaattaaaatgcaataacacgtagatattgatagttgattaatgattttcctttaagaaatttgtgtatgatgcaggattggaaggattgaatact 3705740  T
Q  201 tattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatgactcgattttagatgctctaaa 300  Q
    ||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3705739 tattaggtactactattaaaaaattccaaataagtgatgtgtacgcgtgaaatctatttaagtatttaaaaatgaatgactcgattttggatgctctaaa 3705640  T
Q  301 tatagggttcaaatattgatcaaacgatg-gtgtccattaagtggtagagacacttgacacttgatctcatatggtgtaagctacaaataccaagtgcat 399  Q
    |||||||||||| |  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  3705639 tatagggttcaatttgtgatcaaacgatgtttgtccattaagtggtagagacacttgacacttgatctcatatggtgtaagctatagataccaagtgcat 3705540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 7694094 - 7693893
Alignment:
Q  50 gggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatg 148  Q
    ||||||||||||||||| |||||| || | | |||| |||||||||||| ||||||||||| ||||| | | | | | || |||||||||||||||| ||    
T  7694094 gggtctcacttaagaccttcaatcttaagagggacctacacttttttaatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtg 7693995  T
Q  149 agtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgt 248  Q
     ||| ||||||| ||||||||||  |||   || ||||| |||||||||||||||||||||||| || |||||||||  ||||||||||| ||||| |||    
T  7693994 ggttccatttaaaaaatttgtgtgagattatgggttggagggattgagtacttattaggtactattactaaaaaattataaatgagtgatgtgtatacgt 7693895  T
Q  249 ga 250  Q
    ||    
T  7693894 ga 7693893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 32658564 - 32658408
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    |||||||||| |||||| ||||||||||||||||  | | | |   || |||||||||||||||| ||  || |||||||||| |||||||  ||| | |    
T  32658564 gacccacactcttttaatattaaaaaattaaaatatactgatataaagttattgatagttgattagtggattccatttaagaactttgtgtgagatatgg 32658465  T
Q  181 gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    | |||||  |||| |||  ||||||||||||||||||||||||||  |||||||||||    
T  32658464 g-ttggagtgatttagtgtttattaggtactactattaaaaaattataaatgagtgat 32658408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 32977462 - 32977370
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaa 223  Q
    |||||||||||||||| || ||  |||||||||| |||||||  ||| | || ||||| ||||||||| |||||||||||||||||||||||||    
T  32977462 tattgatagttgattagtgggtcccatttaagaactttgtgtgagatctggg-ttggagggattgagtgcttattaggtactactattaaaaaa 32977370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 31743651 - 31743560
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaa 221  Q
    |||| ||||||||||||||  | |||||||| ||||||||||| |||||  | ||| | ||||||||| |||||||| ||||||||||||||    
T  31743651 tattaatagttgattaatgtatctcatttaataaatttgtgtaagatgttcggttgaagggattgagttcttattagatactactattaaaa 31743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 33755774 - 33755867
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaat 224  Q
    |||||||||||||||| ||  ||||||||||||| |||||||  ||| |  | |||||  |||||| ||||||||||||||||||||||||||||    
T  33755774 tattgatagttgattagtggatttcatttaagaattttgtgtgagatttgtg-ttggagtgattgaatacttattaggtactactattaaaaaat 33755867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 387759 - 387864
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || || | |||||||||||||||||   |||| |||||| | | ||||||| | ||| || ||||||||||||||||||  ||    
T  387759 tattgatagttgattagtgggtcttatttaagaaatttgtgtgaaatgttggattgaatgaattgagtgcctatcagatactactattaaaaaattataa 387858  T
Q  230 atgagt 235  Q
    ||||||    
T  387859 atgagt 387864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 3436076 - 3436014
Alignment:
Q  182 attggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtat 244  Q
    ||||||| |||||| |||||||||| || ||||||||||||||| ||||||| |||| |||||    
T  3436076 attggaaagattgaatacttattagatattactattaaaaaattacaaatgaatgatgtgtat 3436014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 22281798 - 22281763
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatt 225  Q
    |||||||| |||||||||||||||||||||||||||    
T  22281798 gattgagtgcttattaggtactactattaaaaaatt 22281763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 3543259 - 3543355
Alignment:
Q  156 tttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaa 252  Q
    ||||||||||||||||  ||||  | |||||| ||||| ||||||| |||| || |||||||||||| ||  |||||||| || ||||  |||||||    
T  3543259 tttaagaaatttgtgtgagatgctgaattggagggattaagtacttgttagataatactattaaaaatttataaatgagtaatgtgtacacgtgaaa 3543355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 274
Target Start/End: Complemental strand, 10180783 - 10180560
Alignment:
Q  51 ggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatga 149  Q
    |||||||||||||||   ||||| || ||| |||||| || ||||||| ||||||||||| | ||| ||| | |   || |||||||||||||||   ||    
T  10180783 ggtctcacttaagacgcccaatcttaagtgggacccatacctttttaatattaaaaaattgatatgtaatgatataaagttattgatagttgattgtgga 10180684  T
Q  150 gtttcatttaagaaatttgtgtatgatg-taggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgt 248  Q
     | |||||||||||||||||||| |||| |||| ||||| | ||||||| |||||||||||||||||||||||||||  ||||||||||| ||||  |||    
T  10180683 -tctcatttaagaaatttgtgtaagatgctagg-ttggaggcattgagttcttattaggtactactattaaaaaattataaatgagtgatatgtacacgt 10180586  T
Q  249 gaaatctatttaagtatttaaaaatg 274  Q
    || ||| ||||||||| |||||||||    
T  10180585 gagatccatttaagtacttaaaaatg 10180560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 91 - 250
Target Start/End: Original strand, 39055157 - 39055315
Alignment:
Q  91 tttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaagg 190  Q
    ||||||| ||||||||||||||||| ||| | |   || |||||||||||||||| || |||||||||||||| |||||||  ||| | |  ||||| ||    
T  39055157 tttttaatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcatttaagaactttgtgtgagatct-gagttggaggg 39055255  T
Q  191 attgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtga 250  Q
    ||| | |||||||||||||||| ||||||||||||  ||||||||||| |||| ||||||    
T  39055256 atttaatacttattaggtactaatattaaaaaattataaatgagtgatgtgtacgcgtga 39055315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 822469 - 822377
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaa 223  Q
    ||||||||||||||||||| || ||||||||||| |||||||  ||| | || ||||| |||||||||||||||||| ||||||||||||||||    
T  822469 tattgatagttgattaatgtgtctcatttaagaactttgtgtgagatctggg-ttggagggattgagtacttattagatactactattaaaaaa 822377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 92 - 278
Target Start/End: Original strand, 49211023 - 49211210
Alignment:
Q  92 ttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatg-taggattggaagg 190  Q
    |||||| ||||||||||||||||| ||| | |   || |||||||| |||||||||| || ||||||||| ||||| |||  |||| |||| ||||| ||    
T  49211023 ttttaatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatgggtctcatttaaggaatttttgtgagatgctagg-ttggaggg 49211121  T
Q  191 attgagtacttattaggtactactatt-aaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatg 278  Q
    || |||| |||||||| |||||||||| ||||||||  |||| | |||| ||||  ||||||| ||||||||||| | |||||||||||    
T  49211122 atagagttcttattagatactactattaaaaaaattataaataaatgatatgtacacgtgaaacctatttaagtactcaaaaatgaatg 49211210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 23359085 - 23359249
Alignment:
Q  79 gagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgt 178  Q
    |||| ||||||| |||||| ||||||||||| ||||   |||| |   || |||||||||||||||  ||  | ||||||||||| |||||||  ||| |    
T  23359085 gagatccacactcttttaatattaaaaaattgaaatattataatataaagttattgatagttgatttgtggatctcatttaagaactttgtgtgagatct 23359184  T
Q  179 aggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtat 244  Q
    ||| |||||  |||||||| |||||||| ||||||||||||||||||  |||||| |||| |||||    
T  23359185 agg-ttggagtgattgagtgcttattagatactactattaaaaaattataaatgaatgatgtgtat 23359249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 11347014 - 11347113
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattgg----aaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||| ||| |||||||||| || |||||||||||||||||||  ||||  || ||||    | ||||||| |||||||||||||||||||||||||||||    
T  11347014 tattaataattgattaatgcgtctcatttaagaaatttgtgtgagatgctgggttggttggagggattgaatacttattaggtactactattaaaaaatt 11347113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 2396332 - 2396445
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || ||| |||||||||||||| |||  ||||  |  || ||  |||||||| ||||||||||||||||||||| |||||  ||    
T  2396332 tattgatagttgattagtgggttccatttaagaaatttttgtgagatgctgagtttgagcgattgagttcttattaggtactactattaacaaattataa 2396431  T
Q  230 atgagtgatctgta 243  Q
    || |||||| ||||    
T  2396432 ataagtgatgtgta 2396445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 30865881 - 30865962
Alignment:
Q  86 acacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaattt 167  Q
    |||||||||||| ||||||||||| ||||| ||| | |   || |||||||||||||||| ||||| |||||||||||||||    
T  30865881 acacttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaattt 30865962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 35309016 - 35308928
Alignment:
Q  189 ggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaat 277  Q
    |||||||||||||||||| || |||||||||||||||  |||| |||||  |||| |||||| |   ||||||||||| ||||||||||    
T  35309016 ggattgagtacttattagatattactattaaaaaattataaataagtgacgtgtacgcgtgagactcatttaagtattcaaaaatgaat 35308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 52199788 - 52199943
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    ||||| |||| |||||| ||||||||||| ||||  ||| | |  ||  |||||||||| ||||| || ||  |||||||||| |||||||  ||| | |    
T  52199788 gacccgcactcttttaatattaaaaaattgaaatataatgatatataattattgatagtggattagtgggtcccatttaagaactttgtgtgagatctgg 52199887  T
Q  181 gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtga 237  Q
    | |||||  |||||| | |||||||||||||||||||||||||||  ||||||||||    
T  52199888 g-ttggagtgattgaatgcttattaggtactactattaaaaaattataaatgagtga 52199943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 53096698 - 53096603
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||||||||||||||| |  ||  ||||||||||||||||||  ||||| || ||  | ||||||||| ||||||| ||| |||||||||||||||    
T  53096698 tattgatagttgattagttggtcccatttaagaaatttgtgtgagatgttgggttaaagggattgagttcttattaagtattactattaaaaaatt 53096603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 12447452 - 12447565
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || || | ||||||||||||| |||  ||||  || ||  ||||||||||| |||||||   |||||||||||||||||  ||    
T  12447452 tattgatagttgattagtgggtcttatttaagaaatttttgtgagatgctgggttaaaaggattgagttcttattatagactactattaaaaaattataa 12447551  T
Q  230 atgagtgatctgta 243  Q
    || |||||| ||||    
T  12447552 ataagtgatttgta 12447565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 22628502 - 22628610
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| |||||  ||||||| |||||||||| |||| | || |  ||  ||||||||  |||||| ||||| |||||||||||||  ||    
T  22628502 tattgatagttgattagtgagtcccatttaaaaaatttgtgtgtgatattgggtcagagagattgagtgtttattatgtactcctattaaaaaattataa 22628601  T
Q  230 atgagtgat 238  Q
    | |||||||    
T  22628602 acgagtgat 22628610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 39629283 - 39629189
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||||||||||| ||| ||  | ||||||||||| ||||||| |||| | || |||||  |||| ||| |||||||| ||||||||||||||||||    
T  39629283 tattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctggg-ttggagtgatttagtgcttattagatactactattaaaaaatt 39629189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 18743312 - 18743278
Alignment:
Q  189 ggattgagtacttattaggtactactattaaaaaa 223  Q
    ||||||||| |||||||||||||||||||||||||    
T  18743312 ggattgagtgcttattaggtactactattaaaaaa 18743278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 30865975 - 30866017
Alignment:
Q  196 gtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    ||||||||||||||||||||||||||||||  || ||||||||    
T  30865975 gtacttattaggtactactattaaaaaattataagtgagtgat 30866017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 35332073 - 35331981
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaa 223  Q
    |||||||||||||||| ||  |  |||||||||| |||||||  ||| | || |||||  |||||||| ||||||| |||||||||||||||||    
T  35332073 tattgatagttgattagtggatcccatttaagaactttgtgtgagatctggg-ttggagtgattgagtgcttattatgtactactattaaaaaa 35331981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 51655161 - 51655272
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagta---cttattaggtactactattaaaaaattt 226  Q
    |||||||||||||||| |  || |||||||| ||||||||||| ||||  || ||| |||||||||  |   |||||||| ||||||| |||||| |||     
T  51655161 tattgatagttgattagttggtctcatttaataaatttgtgtaagatgctgggttgaaaggattgatcaattcttattagatactactgttaaaatatta 51655260  T
Q  227 caaatgagtgat 238  Q
     |||||||||||    
T  51655261 taaatgagtgat 51655272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 38593975 - 38594011
Alignment:
Q  135 atagttgattaatgagtttcatttaagaaatttgtgt 171  Q
    |||| |||||||| |||||||||||||||||||||||    
T  38593975 atagatgattaattagtttcatttaagaaatttgtgt 38594011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 76 - 244
Target Start/End: Original strand, 31330374 - 31330542
Alignment:
Q  76 agtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatga 175  Q
    |||||||| || ||| |||||| ||||||||||| ||||| ||| | |  ||  |||||||||||||||| |  || |||||||||||||||||||   |    
T  31330374 agtgagacacatactattttaatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtgaaa 31330473  T
Q  176 tgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtat 244  Q
    ||| || ||||| ||||||||| ||||||||||||||| |||||||||||  ||||||||||| |||||    
T  31330474 tgttgggttggagggattgagtgcttattaggtactaccattaaaaaattataaatgagtgatgtgtat 31330542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 37698473 - 37698610
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    |||||||||| |||||| ||||||||||||||||| | | | |   || | ||||||||| |||| || |||||||||||||| |||||||  ||| | |    
T  37698473 gacccacactcttttaatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcatttaagaattttgtgtgagatttgg 37698572  T
Q  181 gattggaaggattgagtacttattaggtactactattaa 219  Q
    | ||||| ||||||||| |||||||||||||||||||||    
T  37698573 g-ttggagggattgagtgcttattaggtactactattaa 37698610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 23156373 - 23156238
Alignment:
Q  87 cacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattgg 186  Q
    |||| |||||| ||||||||||||||||| | | | |   || ||||||||||||||||||| || ||||||||||| |||||||  ||| |||| ||||    
T  23156373 cactcttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattaatgggtctcatttaagaactttgtgtgagatctagg-ttgg 23156275  T
Q  187 aaggattgagtacttattaggtactactattaaaaaa 223  Q
    | ||||| ||| |||||||| ||||||||||| ||||    
T  23156274 agggattaagtgcttattagctactactattataaaa 23156238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 4958191 - 4958388
Alignment:
Q  50 gggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatg 148  Q
    ||||||||||||||||| || ||| || ||| || |||||| ||||||| ||||||||||| | ||| ||| | |   || | |||||||||||||  ||    
T  4958191 gggtctcacttaagaccctccatcttaagtgggatccacacctttttaatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtg 4958290  T
Q  149 agtttcatttaagaaatttgtgtatgatgtag---gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
     ||||||||||||||| ||||||  ||||| |   | ||||| |||||||||  ||||||| ||||||||||||||||||  |||||| |||| ||||    
T  4958291 ggtttcatttaagaaagttgtgtgagatgttgttcggttggagggattgagtgtttattagatactactattaaaaaattataaatgaatgatgtgta 4958388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 235
Target Start/End: Complemental strand, 43302254 - 43302104
Alignment:
Q  84 ccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggat 183  Q
    ||||||| |||||| ||||||||||| ||||  ||| | |   || |||||||||||||||| || ||  |||||||||| | |||||  ||| ||| ||    
T  43302254 ccacactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaattatgtgtgagatctag-at 43302156  T
Q  184 tggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagt 235  Q
    ||||  ||||||||| ||||||||||||||||||||||||||  ||||||||    
T  43302155 tggagtgattgagtatttattaggtactactattaaaaaattataaatgagt 43302104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 225
Target Start/End: Complemental strand, 38360919 - 38360780
Alignment:
Q  84 ccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggat 183  Q
    ||||||| |||| | ||||||||||| |||||  |||  |  ||| |||||||||||| | | ||| || ||||||| ||||||||||  ||||| ||||    
T  38360919 ccacactcttttgatattaaaaaattgaaatgtgatagtatatagttattgatagttggtaagtgaattccatttaaaaaatttgtgtgagatgttggat 38360820  T
Q  184 tggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    ||||  |||||||| |||||||| ||||||||||||||||||    
T  38360819 tgga--gattgagtgcttattagatactactattaaaaaatt 38360780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 41015333 - 41015443
Alignment:
Q  127 agatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaattt 226  Q
    ||||||||||||||||||||||||| |||||| | || |||||||   |||  ||||| || ||||| |||||||||||| || || ||||||||||||     
T  41015333 agatattgatagttgattaatgagtctcatttgaaaattttgtgtgaaatgctggatttgatggattaagtacttattagatattattattaaaaaatta 41015432  T
Q  227 caaatgagtga 237  Q
     ||||||||||    
T  41015433 taaatgagtga 41015443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 44441627 - 44441738
Alignment:
Q  132 ttgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaat 231  Q
    |||||||||||||| || || ||||||||||||||| |||  ||||  || |||||   ||||||| |||||||||||||||  ||||||||||  ||||    
T  44441627 ttgatagttgattagtgggtctcatttaagaaatttttgtgagatgctgggttggagatattgagttcttattaggtactaccgttaaaaaattataaat 44441726  T
Q  232 gagtgatctgta 243  Q
    ||||||| ||||    
T  44441727 gagtgatgtgta 44441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 48767330 - 48767211
Alignment:
Q  48 tggggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaa 146  Q
    ||||||||||| ||||||| |||||| || ||| |||  |||||||||||| | ||||||||| ||||||||| | |   || ||||||||||||||||     
T  48767330 tggggtctcacataagaccctcaatcttaagtgggactaacacttttttaataataaaaaattgaaatgcaatgatataaagttattgatagttgattag 48767231  T
Q  147 tgagtttcatttaagaaatt 166  Q
    || || ||||||||||||||    
T  48767230 tgggtctcatttaagaaatt 48767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 225
Target Start/End: Original strand, 2008549 - 2008718
Alignment:
Q  57 acttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttca 155  Q
    |||||||||| |||||| || ||| ||| || |||||||||| ||||||||||| ||||| |||   |   |  ||||||||||||||||| | ||| ||    
T  2008549 acttaagaccttcaatcttaagtgggacacatacttttttaatattaaaaaattgaaatgtaatggtataaaattattgatagttgattaacgggttcca 2008648  T
Q  156 tttaagaaatttgtgtatgatgtaggattggaaggattgagtac-ttattaggtactactattaaaaaatt 225  Q
    ||||||||||||||||  ||| | || || || ||||||||||| |||||| ||||||||| |||||||||    
T  2008649 tttaagaaatttgtgtgagatct-gggttagagggattgagtactttattaagtactactactaaaaaatt 2008718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 19753135 - 19753066
Alignment:
Q  47 ttggggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatg 115  Q
    ||||||||| |||||||||  |||||| || ||||||||||||| ||||||||||||||||||| |||||    
T  19753135 ttggggtctaacttaagactctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatg 19753066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 243
Target Start/End: Original strand, 19987113 - 19987306
Alignment:
Q  51 ggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatga 149  Q
    |||||||||||||||| |||||| || ||||||||||||  ||||||| |||||||||||   ||| ||| |     || |||||||||| ||||  |      
T  19987113 ggtctcacttaagaccctcaatcttaagtgagacccacaactttttaatattaaaaaattgttatgtaatgatttaaagttattgatagtcgatttgtag 19987212  T
Q  150 gtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    ||  |||||||||| |||||||  ||||| || ||||| ||||   |||||||||| |||||||||||||||||||  |||||| |||| ||||    
T  19987213 gtcccatttaagaactttgtgtgagatgttgggttggagggatcatgtacttattatgtactactattaaaaaattataaatgaatgatgtgta 19987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 47841512 - 47841407
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||  ||||| ||||||||||| ||| |||  ||||   | ||||| |||||||||||||||||  ||||||||||| ||||||  ||    
T  47841512 tattgatagttgatttgtgagtctcatttaagaactttatgtgagatgcttggttggagggattgagtacttattaaatactactattacaaaattataa 47841413  T
Q  230 atgagt 235  Q
    ||||||    
T  47841412 atgagt 47841407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 36482096 - 36481965
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| ||| | ||||||||||| |||||||   || | || || ||  |||||||| |||||||  |||||||||||||| ||| |||    
T  36482096 tattgatagttgattagtgaatctcatttaagaactttgtgtgatatctggg-ttagagtgattgagtgcttattaaatactactattaaaatattacaa 36481998  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaag 262  Q
     |||||||| ||||  ||||||| |||||||||    
T  36481997 gtgagtgatatgtacacgtgaaacctatttaag 36481965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 30859666 - 30859713
Alignment:
Q  191 attgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||    
T  30859666 attgagtacttattgggtactactattaaaaaattataaatgagtgat 30859713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 36656747 - 36656591
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatg-ta 179  Q
    ||||||||| ||||||| ||||||||||| | ||| ||| | |   || |||| |||||||||| ||| || ||||||||||| ||||| |  |||  ||    
T  36656747 gacccacacctttttaatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcatttaagaactttgtatgagatacta 36656648  T
Q  180 ggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
      |||||| |||||||||| ||||||| ||| ||||||||||||||  |||||||||||    
T  36656647 --attggagggattgagtatttattagataccactattaaaaaattataaatgagtgat 36656591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 19594001 - 19594067
Alignment:
Q  49 ggggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaat 114  Q
    ||||||| |||||||||  |||||| || ||||||||||||| ||||||||||||||||||| ||||    
T  19594001 ggggtctaacttaagactctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaat 19594067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 25324672 - 25324612
Alignment:
Q  49 ggggtctcacttaagaccatcaatcat-agtgagacccacacttttttaagattaaaaaatt 109  Q
    ||||||||||||||||||| ||||| | |||||||||||||| ||||||| |||||||||||    
T  25324672 ggggtctcacttaagaccaccaatcttaagtgagacccacac-tttttaatattaaaaaatt 25324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 225
Target Start/End: Original strand, 38223930 - 38224106
Alignment:
Q  52 gtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgag 150  Q
    ||||||||||||||  |||||| || ||| ||||||||| ||||||| ||||||||||| | ||| ||| | |    | |||||||||||||||  ||||    
T  38223930 gtctcacttaagactctcaatcttaagtgggacccacacctttttaatattaaaaaatttatatgtaatgatataatgttattgatagttgatttttgag 38224029  T
Q  151 tttcattt--aagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    | ||||||  ||||| ||||| |  |||   || ||| | ||||||||||||||||||||||||| || ||||||||    
T  38224030 tctcatttttaagaactttgtttgagatactgggttgaagggattgagtacttattaggtactaccatcaaaaaatt 38224106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 5513988 - 5513844
Alignment:
Q  79 gagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgt 178  Q
    ||||| |||||| |||||| || |||||||| ||||| ||| | |   || ||||||| || ||||| ||||| |||||||| ||||||| ||  |||      
T  5513988 gagacacacactcttttaatataaaaaaattgaaatgtaattatataaagttattgatggtcgattagtgagtctcatttaaaaaatttgcgtgagatac 5513889  T
Q  179 aggattggaaggattgagtacttattaggtactactattaaaaaa 223  Q
     || ||||| |||||||| ||||||||| || |||||||||||||    
T  5513888 ggggttggagggattgagaacttattagatattactattaaaaaa 5513844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 36657978 - 36657875
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || ||  |||||||||| |||||||  ||| | || |||||  |||||||| |||||||| || |||||||||||||||  ||    
T  36657978 tattgatagttgattagtgggtcccatttaagaactttgtgtgagatctggg-ttggagtgattgagtgcttattagatagtactattaaaaaattataa 36657880  T
Q  230 atgag 234  Q
    |||||    
T  36657879 atgag 36657875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 46748064 - 46748009
Alignment:
Q  189 ggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtat 244  Q
    ||||||||| |||||||||| ||||||||||||||||  |||| |||||| |||||    
T  46748064 ggattgagttcttattaggtgctactattaaaaaattataaataagtgatgtgtat 46748009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 23801860 - 23801827
Alignment:
Q  192 ttgagtacttattaggtactactattaaaaaatt 225  Q
    ||||||||||||||||||||| ||||||||||||    
T  23801860 ttgagtacttattaggtactattattaaaaaatt 23801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 29914524 - 29914400
Alignment:
Q  99 attaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagta 198  Q
    ||||||||||| ||||| ||||| |   || ||||||||||||||||  ||||  |||||| |||||||||||  |||||    ||||| ||||| |||     
T  29914524 attaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatgttaagttggagggattaagtg 29914425  T
Q  199 cttattaggtactactattaaaaaa 223  Q
     |||||||||| |||||||| ||||    
T  29914424 tttattaggtattactattataaaa 29914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 31322334 - 31322290
Alignment:
Q  199 cttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    |||||||||||||||| ||||||||||  ||||||||||| ||||    
T  31322334 cttattaggtactactgttaaaaaattataaatgagtgatgtgta 31322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 35463318 - 35463222
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaa-ggattgagtacttattaggtactactattaaaaaatt 225  Q
    ||||||||||||||| |||| |||||||||||||||||||||  ||||| || || ||| |||||||||||||||||||||||||||||||||||||    
T  35463318 tattgatagttgatttatgaatttcatttaagaaatttgtgtgagatgttgggtttgaaaggattgagtacttattaggtactactattaaaaaatt 35463222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 41520952 - 41520820
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||||||||| |||  || ||  |||||| ||| |||||||  ||||  || ||||| ||||||||| |||||||||||| ||||||||||||||  ||    
T  41520952 tattgatagttaatttgtgggtcccatttaggaactttgtgtgagatgctgggttggagggattgagttcttattaggtaccactattaaaaaattataa 41520853  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaag 262  Q
    || |||||| ||||  ||||||| | |||||||    
T  41520852 ataagtgatgtgtacacgtgaaacccatttaag 41520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 12593111 - 12593272
Alignment:
Q  82 acccacacttttttaagattaaaaaa-ttaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    ||||||||| |||||| ||||||||| |||||||| ||| | |   || |||||||| ||||||| |  || ||||||||||||||||| |  || || |    
T  12593111 acccacactcttttaatattaaaaaagttaaaatgtaatgatataaagttattgataattgattagttggtctcatttaagaaatttgtttgagacgtgg 12593210  T
Q  181 gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    |  |||  ||| |||||||||||||| ||||||||||||||| ||  ||||||||||| ||||    
T  12593211 ggatggg-ggaatgagtacttattagatactactattaaaaagttataaatgagtgatgtgta 12593272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 3558806 - 3558887
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtact 211  Q
    ||||||||||||||||||| ||  |||||| |||||||||||   |||  |||||||| ||||||||| |||||||| ||||    
T  3558806 tattgatagttgattaatgggtcccatttatgaaatttgtgtgacatgctggattggagggattgagttcttattagatact 3558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 26675569 - 26675457
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||| ||||||| || || | ||||||||||||| |||  ||| |  | ||||||||||| ||| ||||| || ||||||||||||||||||  ||    
T  26675569 tattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgag-ttggaaggattaagtgcttataagatactactattaaaaaattataa 26675471  T
Q  230 atgagtgatctgta 243  Q
    ||||||||| ||||    
T  26675470 atgagtgatgtgta 26675457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 26947177 - 26947065
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||| ||||||| || || | ||||||||||||| |||  ||| |  | ||||||||||| ||| ||||| || ||||||||||||||||||  ||    
T  26947177 tattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgag-ttggaaggattaagtgcttataagatactactattaaaaaattataa 26947079  T
Q  230 atgagtgatctgta 243  Q
    ||||||||| ||||    
T  26947078 atgagtgatgtgta 26947065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 18396548 - 18396490
Alignment:
Q  191 attgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtg 249  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||| ||| |||| |||||    
T  18396548 attgagtatttattaggtactattattaaaaaattataaatgagggatgtgtacgcgtg 18396490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 11200495 - 11200548
Alignment:
Q  197 tacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtga 250  Q
    ||||||||||||| || ||||||||||||  ||||||||||| |||| ||||||    
T  11200495 tacttattaggtattattattaaaaaattataaatgagtgatgtgtacgcgtga 11200548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 33133337 - 33133296
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgt 171  Q
    |||||||||||||||| ||||| | |||||||||||||||||    
T  33133337 tattgatagttgattagtgagtcttatttaagaaatttgtgt 33133296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 42951750 - 42951701
Alignment:
Q  189 ggattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    ||||||||||||||||| |||||| ||||| ||||||  |||||||||||    
T  42951750 ggattgagtacttattatgtactattattacaaaattataaatgagtgat 42951701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 299
Target Start/End: Original strand, 13984072 - 13984240
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| |  || ||||||||||| |||||||  ||| | || || ||  ||||||||||||||||| ||||||||||||||||||  ||    
T  13984072 tattgatagttgattagtaggtctcatttaagaattttgtgtgagatctggg-ttagagagattgagtacttattagatactactattaaaaaattataa 13984170  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatgactcgattttagatgctctaa 299  Q
    ||| ||||| ||||||||||  | | ||||||| | ||||||||| ||| ||| ||| | ||||||||||    
T  13984171 atgtgtgatgtgtatgcgtgggacccatttaagaacttaaaaatggatgtctccattgtggatgctctaa 13984240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 52353927 - 52353766
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    |||||| |||||||||| ||||||||||| ||||| ||| | |   || |||||||||||||||| || |||  |||||||||||||||||  ||||       
T  52353927 gacccatacttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatg-ct 52353829  T
Q  181 gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    | ||||| |||| |||| ||||||||||||| |||||||||||||  |||| |||||| ||||    
T  52353828 gcttggagggatcgagtgcttattaggtactgctattaaaaaattataaattagtgatgtgta 52353766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 42831641 - 42831784
Alignment:
Q  92 ttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatg-taggattggaagg 190  Q
    |||||| ||||||||||||||||| ||| | |   |  |||||||||||||||||||  | ||||||||||||||| |||  |||| |||| ||||| |     
T  42831641 ttttaatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggatctcatttaagaaatttttgtgagatgctagg-ttggagga 42831739  T
Q  191 attgagtacttattaggtactactattaaaaaatttcaaatgagt 235  Q
    ||| ||| |||||||||||||||||||||||||||  ||||||||    
T  42831740 atttagttcttattaggtactactattaaaaaattataaatgagt 42831784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 43822761 - 43822928
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    |||| ||||| |||||| ||||||||||| ||||| | | | |   || |||||||||||||||| || ||  |||||||||| |||||||  ||| | |    
T  43822761 gacctacactcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgg 43822860  T
Q  181 gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtg 249  Q
    | ||||| | ||||||| |||||||| ||||||||||||||||||  ||||||||||| |||| |||||    
T  43822861 g-ttggaggaattgagtgcttattagatactactattaaaaaattataaatgagtgatgtgtacgcgtg 43822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 51263185 - 51263327
Alignment:
Q  91 tttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaagg 190  Q
    ||||||| ||||||||||||||||  ||| |||   || |||||||||||||||| || |||||||||||||||||||||   ||||  | |||| || |    
T  51263185 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtttcatttaagaaatttgtg--agatgctgaattgaaatg 51263282  T
Q  191 attgagtacttattaggtactactattaaaaaatttcaaatgagt 235  Q
    ||||||| || ||||||||||| |||| |||| ||  ||||||||    
T  51263283 attgagtgctcattaggtactattattgaaaatttataaatgagt 51263327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 262
Target Start/End: Original strand, 25813770 - 25813901
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || || ||||||||||| |||| ||  ||| | || ||||| |||  |||||||||||| ||||| |||||||||||||  ||    
T  25813770 tattgatagttgattagtgggtctcatttaagaactttgcgtgagatctggg-ttggagggaccgagtacttattatgtacttctattaaaaaattataa 25813868  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaag 262  Q
    ||||||||| |||| |||||  | |||||||||    
T  25813869 atgagtgatgtgtacgcgtgggacctatttaag 25813901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 23333752 - 23333902
Alignment:
Q  88 acttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattgga 187  Q
    |||||||||| ||||||||||| ||||  ||||| |   || |||||||| ||||| | ||||| ||||||||||| | |||||  ||| | || |||||    
T  23333752 acttttttaatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcatttaagaactgtgtgtgagatctggg-ttgga 23333850  T
Q  188 aggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatc 239  Q
      |||||||| ||||||| |||||| ||||||||||||  ||||||||||||    
T  23333851 gtgattgagtgcttattaagtactattattaaaaaattataaatgagtgatc 23333902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 27544352 - 27544518
Alignment:
Q  76 agtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatga 175  Q
    |||| |||||||||| |||||| |||||||| || ||||| ||| ||    || || ||||| ||| |||||| || ||||||||||| | |||||  ||    
T  27544352 agtgggacccacactcttttaatattaaaaagttgaaatgtaatgacttaaagttagtgataattgtttaatgggtctcatttaagaactgtgtgtcaga 27544451  T
Q  176 tgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    | | || ||||| ||||||||| |||||||| | ||| ||||||||||||  ||||||||||| ||||    
T  27544452 tctggg-ttggagggattgagtgcttattagatgctattattaaaaaattataaatgagtgatgtgta 27544518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 51504598 - 51504515
Alignment:
Q  155 atttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    |||||||||| ||||||  ||||  || ||||| | |||||||||||| || |||||||||||||||||||  |||||||||||    
T  51504598 atttaagaaacttgtgtgggatgatgggttggaggaattgagtacttaatacgtactactattaaaaaattataaatgagtgat 51504515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 44665406 - 44665316
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaa 220  Q
    |||||||||||||||| ||  |||||||||||| |||||| |  |||   ||||||||  ||||||||||||||||| || ||||||||||    
T  44665406 tattgatagttgattagtgtatttcatttaagagatttgtatgagatactggattggagcgattgagtacttattagatattactattaaa 44665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 38902061 - 38902110
Alignment:
Q  194 gagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    |||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  38902061 gagtgcttattaggtactactattaaaaaattataaatgagtgatatgta 38902110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 250
Target Start/End: Complemental strand, 32851849 - 32851730
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || ||  |||||||||| || |||   ||| | |||| ||| | ||||| | |||||||| ||||||||||||||||||  ||    
T  32851849 tattgatagttgattagtgtgtcccatttaagaacttcgtgggagatctgggat-ggaggaattgattgcttattagatactactattaaaaaattgtaa 32851751  T
Q  230 atgagtgatctgtatgcgtga 250  Q
    ||||||||| |||| ||||||    
T  32851750 atgagtgatgtgtacgcgtga 32851730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 38601029 - 38600938
Alignment:
Q  154 catttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaattt-caaatgagtgatctgtat 244  Q
    ||||||| ||||||||||  ||||   ||||| | |||||||||||||||||| || |||||||||||| |||  ||||||||||| |||||    
T  38601029 catttaaaaaatttgtgtgagatgcttgattgaagggattgagtacttattagatattactattaaaaattttataaatgagtgatgtgtat 38600938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 49003454 - 49003359
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||||||||||||||  || || | ||||||||| |||||||  ||||   | |||||  |||||| ||||||||||||| |||||||||||||||    
T  49003454 tattgatagttgatttgtgggtctaatttaagaattttgtgtgagatgctcggttggagagattgaatacttattaggtattactattaaaaaatt 49003359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 11566969 - 11566896
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatg-taggattggaaggattgagtacttat 203  Q
    |||||||||||||||||| ||| |||||| ||||||||||||   ||| |||| ||||||||||||||| |||||    
T  11566969 tattgatagttgattaataagtctcatttgagaaatttgtgtgatatgctagg-ttggaaggattgagtgcttat 11566896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 14775235 - 14775161
Alignment:
Q  151 tttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||| ||||||| ||||||||| ||| | | ||| || |||||||||| ||||||| ||||||||||| ||||||    
T  14775235 tttcgtttaagagatttgtgtaagatattgaatttgagggattgagtatttattagttactactattagaaaatt 14775161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 28278063 - 28278129
Alignment:
Q  54 ctcacttaagaccatcaatcat-agtgagacccacacttttttaagattaaaaaattaaaatgcaat 119  Q
    |||||||||||||||||||||| || | ||| |||||| |||||| |||||||| || |||||||||    
T  28278063 ctcacttaagaccatcaatcataagcgggactcacactattttaatattaaaaatttgaaatgcaat 28278129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 38118957 - 38118919
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttg 168  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  38118957 tattgatagttgattaatgagtctcatttaaaaaatttg 38118919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 11570007 - 11569966
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgt 171  Q
    |||||||||||||||||| ||| |||||| ||||||||||||    
T  11570007 tattgatagttgattaataagtctcatttgagaaatttgtgt 11569966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 43506292 - 43506385
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaa 223  Q
    |||||||||||||||| |||||   |||||| ||||||||||   ||||  | ||||| ||||||||| |||| || |||||| ||||||||||    
T  43506292 tattgatagttgattagtgagtcaaatttaataaatttgtgtgaaatgtttggttggagggattgagtgcttactaagtactaatattaaaaaa 43506385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 35615503 - 35615471
Alignment:
Q  192 ttgagtacttattaggtactactattaaaaaat 224  Q
    ||||||||||||||||||||| |||||||||||    
T  35615503 ttgagtacttattaggtactattattaaaaaat 35615471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 2603162 - 2603068
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||||||||||||||| ||  | ||||||||||| |||||||  ||| | |||||||| |||||||||||||||||| ||||||||||||||||||    
T  2603162 tattgatagttgattagtggatctcatttaagaactttgtgtgagatct-ggattggagggattgagtacttattagatactactattaaaaaatt 2603068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 225
Target Start/End: Original strand, 28540626 - 28540800
Alignment:
Q  52 gtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgag 150  Q
    ||||||||||||| | |||||| || | | ||| |||||| |||||| ||||||||||| ||||| ||| | |   |  |||||||||||||||| ||||    
T  28540626 gtctcacttaagaacctcaatcttatgcgggactcacactcttttaatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgag 28540725  T
Q  151 tttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    | || ||||||||||||||||  ||||  || |||||   ||||| ||||||||| |||||||||||||||||||    
T  28540726 tctcttttaagaaatttgtgtgagatgctgggttggagtaattgaatacttattaagtactactattaaaaaatt 28540800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 238
Target Start/End: Original strand, 28557199 - 28557388
Alignment:
Q  50 gggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatg 148  Q
    ||||||||||||||||| |||||| || ||| || ||||||| |||||| ||||||||||| ||||| ||||| |   |  | |||||||||||||| ||    
T  28557199 gggtctcacttaagaccctcaatcttatgtgggatccacactcttttaatattaaaaaattgaaatgtaataatataaaagtgttgatagttgattagtg 28557298  T
Q  149 agtttcatttaagaaatttgtgtatgat-gtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    ||| || ||||| ||| || |||  |||  |||| ||||| | |||||||| ||||||||||||||||||||||||||  |||| ||||||    
T  28557299 agtctcttttaaaaaaattatgtgagatcctagg-ttggaggaattgagtagttattaggtactactattaaaaaattataaattagtgat 28557388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 1155226 - 1155114
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||| ||||||||||||  || |||||||||||||||||||  ||| | || ||||| ||||||| | |||||||| ||||||||||||||||||  ||    
T  1155226 tattggtagttgattaatatgtctcatttaagaaatttgtgtgagatctggg-ttggagggattgaatgcttattagatactactattaaaaaattataa 1155128  T
Q  230 atgagtgatctgta 243  Q
    ||||||||| ||||    
T  1155127 atgagtgatgtgta 1155114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 6519132 - 6519026
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| ||||| ||||||||||||||||||   ||||  || |||||  |||||| | |||||||||||||||||||||||||||  ||    
T  6519132 tattgatagttgattagtgagtctcatttaagaaatttgtg--agatgctgggttggagagattgaattcttattaggtactactattaaaaaattataa 6519035  T
Q  230 atgagtgat 238  Q
    || ||||||    
T  6519034 ataagtgat 6519026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 278
Target Start/End: Complemental strand, 9604592 - 9604444
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| || ||| |||||||||||||| | |  ||||  || ||||| ||||||||| |||||||| ||||| ||||||||||||  ||    
T  9604592 tattgatagttgattagtgggttccatttaagaaatttttatgagatgctgggttggatggattgagttcttattagatactattattaaaaaattataa 9604493  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatg 278  Q
    || ||||||  |||  ||||| | ||||||||| || ||||| ||||||    
T  9604492 attagtgatgcgtagacgtgagacctatttaagaatctaaaactgaatg 9604444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 31226559 - 31226447
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||||||||||| || || ||  |||||||||| |||||||  ||| |||| |||||  | ||||||| ||||||||||||||||||||||||||  ||    
T  31226559 tattgatagttgagtagtgggtcccatttaagaactttgtgtgagatctagg-ttggagtgtttgagtatttattaggtactactattaaaaaattataa 31226461  T
Q  230 atgagtgatctgta 243  Q
    ||||||||| ||||    
T  31226460 atgagtgatgtgta 31226447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 12733998 - 12734062
Alignment:
Q  51 ggtctcacttaagaccatcaatcatagtgagacccacacttttttaagattaaaaaattaaaatg 115  Q
    ||||||||||||||||| ||||| || || |||| |||||||||||| |||||||||||||||||    
T  12733998 ggtctcacttaagaccaccaatcttaatgtgacctacacttttttaatattaaaaaattaaaatg 12734062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 31128587 - 31128527
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtga 250  Q
    |||||| | |||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  31128587 gattgaatgcttattaggtactactattaaaaaattataaatgagtgatgtgtatgcgtga 31128527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 37673782 - 37673678
Alignment:
Q  195 agtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatgactcgattttagatgc 294  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||| |||||| |  |||||||| |   ||||||| ||| ||| ||| | |||||    
T  37673782 agtacttattaggtactactattaaaaaattataaatgagtgatgtgtacgcgtgacacatatttaagaacccaaaaatggatgtctccattgtggatgc 37673683  T
Q  295 tctaa 299  Q
    |||||    
T  37673682 tctaa 37673678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 30714139 - 30714048
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaa 221  Q
    |||||||||||||||| |||||  ||||||  ||||||||||  ||||| |||||||||  ||| ||| ||||||| |||||||||||||||    
T  30714139 tattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactactattaaaa 30714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 30721916 - 30721825
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaa 221  Q
    |||||||||||||||| |||||  ||||||  ||||||||||  ||||| |||||||||  ||| ||| ||||||| |||||||||||||||    
T  30721916 tattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactactattaaaa 30721825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 5535934 - 5535771
Alignment:
Q  79 gagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgt 178  Q
    ||||||| |||| |||||| ||||||||||| ||||  ||| | |   || |||||| ||||||||  || ||| | |||||||| |||||||  ||| |    
T  5535934 gagacccgcactcttttaatattaaaaaattgaaatataatgatataaagttattgaaagttgatttgtgggttccgtttaagaactttgtgtgagatct 5535835  T
Q  179 aggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    ||| |||||  |||||||| ||||| |||||||| ||||||||||||  ||||||||||| ||||    
T  5535834 agg-ttggagtgattgagtgcttataaggtactaatattaaaaaattataaatgagtgatgtgta 5535771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 8673769 - 8673597
Alignment:
Q  51 ggtctcacttaagaccatcaatcat-agtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatga 149  Q
    |||||||||||||||| |||||| | | || |||||| |||||||||| |||||||||| |||||| | | | |   || | |||||| ||||||| ||     
T  8673769 ggtctcacttaagaccctcaatcttaaatgggacccaaacttttttaatattaaaaaatgaaaatgtagtgatataaagtttttgataattgattagtgg 8673670  T
Q  150 gtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaa 222  Q
    ||   |||||| |||||| |||  ||||  || |||||  |||||||| ||||||||||||||||||||||||    
T  8673669 gtcaaatttaaaaaatttatgtgagatgctgggttggagagattgagtgcttattaggtactactattaaaaa 8673597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 13629102 - 13629014
Alignment:
Q  155 atttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    ||||||||| ||||| |  ||||| || ||||| ||||||| |||||||||| ||||||||||||||||||  |||||| |||| ||||    
T  13629102 atttaagaattttgtatgagatgttgggttggagggattgactacttattagatactactattaaaaaattataaatgaatgatgtgta 13629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 13729514 - 13729426
Alignment:
Q  155 atttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    ||||||||| ||||| |  ||||| || ||||| ||||||| |||||||||| ||||||||||||||||||  |||||| |||| ||||    
T  13729514 atttaagaattttgtatgagatgttgggttggagggattgactacttattagatactactattaaaaaattataaatgaatgatgtgta 13729426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 35468367 - 35468485
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||||||||| |||| ||||| ||||||||||| |||| ||  |||  ||  ||||| ||||||||||||||||| ||||| ||||| |||||||  ||    
T  35468367 tattgatagttaattagtgagtctcatttaagaactttgagtgagatc-agtgttggagggattgagtacttattaagtactgctatt-aaaaattataa 35468464  T
Q  230 atgagtgatctgtatgcgtga 250  Q
    ||||||||| |||| ||||||    
T  35468465 atgagtgatgtgtacgcgtga 35468485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 265
Target Start/End: Complemental strand, 4797323 - 4797188
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||  |  ||||| |||||   || ||||||  | ||||||||||||||||  ||    
T  4797323 tattgatagttgattaatgagtcacatttaagaaatttgtgtgagatgctgagttggagggattagatatttattaaatgctactattaaaaaattataa 4797224  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaagtat 265  Q
    || ||||||  |||  ||||| ||| ||||||||||    
T  4797223 attagtgatacgtacacgtgagatccatttaagtat 4797188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 9790131 - 9790092
Alignment:
Q  132 ttgatagttgattaatgagtttcatttaagaaatttgtgt 171  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9790131 ttgatagttgattaatgagtctcatttaagaaatttgtgt 9790092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 11777757 - 11777645
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgta-ggattggaaggattgagtacttattaggtactactattaaaaaatttca 228  Q
    |||||||||||||||| |  || ||||||||||||||||||  |||| || |||||| | ||||||| | ||| ||||||||||||||||| |||||  |    
T  11777757 tattgatagttgattagtaggtctcatttaagaaatttgtg--tgatatatggattgcagggattgaatgcttgttaggtactactattaagaaattata 11777660  T
Q  229 aatgagtgatctgta 243  Q
    ||||| |||| ||||    
T  11777659 aatgaatgatttgta 11777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 3628263 - 3628303
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtg 170  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  3628263 tattgctagttgattaatgaatttcatttaagaaatttgtg 3628303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 5139765 - 5139724
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgt 171  Q
    |||||||||||||||| ||||||||||||||||  |||||||    
T  5139765 tattgatagttgattagtgagtttcatttaagagctttgtgt 5139724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 9134185 - 9134226
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgt 171  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  9134185 tattgatagttgattagtgagtctcatttaagaactttgtgt 9134226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 9135095 - 9135147
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    |||||||| ||||||||||||||||||| |||||||  ||||||||||| ||||    
T  9135095 gattgagtgcttattaggtactactatt-aaaaattgtaaatgagtgatatgta 9135147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 23036828 - 23036941
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||| | ||  ||||  |||||||||||||||  ||||  || ||| |  |||||||| |||||||| |||||||||| |||||||  ||    
T  23036828 tattgatagttgatcagtggatttctattaagaaatttgtgtgagatgctgggttgaagagattgagttcttattagatactactattgaaaaattataa 23036927  T
Q  230 atgagtgatctgta 243  Q
     |||||||| ||||    
T  23036928 ttgagtgatgtgta 23036941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 7288260 - 7288364
Alignment:
Q  134 gatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatga 233  Q
    |||||||||||| | ||| ||||||||||||||| | |  ||||  || ||||| ||||| ||| |||||||| ||||||||| ||| ||||  |||| |    
T  7288260 gatagttgattagtaagtctcatttaagaaatttctatgagatgctgggttggagggattaagttcttattagatactactatgaaacaattataaataa 7288359  T
Q  234 gtgat 238  Q
    |||||    
T  7288360 gtgat 7288364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 13079886 - 13079962
Alignment:
Q  200 ttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaa 276  Q
    |||||||||||||||||| |||||||  ||||||||||  ||||  ||||| |  |||||||||||  |||||||||    
T  13079886 ttattaggtactactattcaaaaattataaatgagtgaaatgtacacgtgagacttatttaagtatcaaaaaatgaa 13079962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 297
Target Start/End: Complemental strand, 14773015 - 14772849
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||||||||||||||||||||  |||||||||| |||||||  ||| |  | ||||| | |||||||||||||||||||||| | ||||||||||  ||    
T  14773015 tattgatagttgattaatgagtcccatttaagaactttgtgtgagatctgtg-ttggaggaattgagtacttattaggtactattgttaaaaaattataa 14772917  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatgactcgattttagatgctct 297  Q
    |||| |||| |||| |||||| | | ||||||| | | |||||||  || ||| ||| ||||||||||    
T  14772916 atgaatgatgtgtacgcgtgagacccatttaagaactcaaaaatgggtgtctccattgtagatgctct 14772849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 65483 - 65388
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    |||||||||||||||||||  | |||||||| ||||||||||  ||||| |||||||| ||||| |||  |||||| ||||||| |||||||||||    
T  65483 tattgatagttgattaatggttctcatttaataaatttgtgtgagatgttggattggagggattaagtgtttattatgtactacaattaaaaaatt 65388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 297
Target Start/End: Original strand, 11922002 - 11922144
Alignment:
Q  154 catttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaat 253  Q
    ||||||||||||||||||  ||| | || ||||| | ||||||| ||| |||||||||||||||||||||||  |||||||| || ||||  ||||| |     
T  11922002 catttaagaaatttgtgtgagatttggg-ttggaggaattgagtgctttttaggtactactattaaaaaattataaatgagtaatgtgtacacgtgagac 11922100  T
Q  254 ctatttaagtatttaaaaatgaatgactcgattttagatgctct 297  Q
    | ||||||||| |||||||||| || ||| ||| | ||||||||    
T  11922101 ccatttaagtaattaaaaatgagtgtctccattgtggatgctct 11922144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 296
Target Start/End: Complemental strand, 6710961 - 6710796
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    ||||||||||||||||||   ||  ||||||||| |||||||  ||| |||| |||||  || ||||| |||||||| ||||||||||||||||||  ||    
T  6710961 tattgatagttgattaattgattctatttaagaactttgtgtgagatctagg-ttggagtgactgagtgcttattagatactactattaaaaaattataa 6710863  T
Q  230 atgagtgatctgtatgcgtgaaatctatttaagtatttaaaaatgaatgactcgattttagatgctc 296  Q
    ||||||||||||||  ||||| | | ||||||  ||  ||||||| ||| ||| ||| |||||||||    
T  6710862 atgagtgatctgtacacgtgagacccatttaaaaatccaaaaatggatgtctccattgtagatgctc 6710796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 26312459 - 26312617
Alignment:
Q  84 ccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggat 183  Q
    ||||||| || ||| ||||||||||  ||||| ||| |||   || ||||| |||||||||| || |||  |||||| ||||||||||  ||| |  | |    
T  26312459 ccacactcttctaatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtgggttctatttaataaatttgtgtgagatctgag-t 26312557  T
Q  184 tggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    |||| | ||||||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  26312558 tggaggaattgagtgcttattaggtactactattaaaaaattataaatgagtgatgtgta 26312617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 265
Target Start/End: Original strand, 34375041 - 34375216
Alignment:
Q  87 cacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattgg 186  Q
    ||||||||||| |||||||| || ||||| ||||| |   || ||||||||||||||||||| ||  |||||||||  ||| ||   ||| |  | ||||    
T  34375041 cacttttttaatattaaaaa-ttgaaatgtaataatataaagttattgatagttgattaatgggtcccatttaagatttttttga--gatcttaggttgg 34375137  T
Q  187 aaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagtat 265  Q
    | ||||||| | |||||||||||||||||||||||||||  |||| |||||| ||||   |||| ||||||||||||||    
T  34375138 agggattgaattcttattaggtactactattaaaaaattataaataagtgatgtgtacatgtgagatctatttaagtat 34375216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 40999631 - 40999754
Alignment:
Q  50 gggtctcacttaagaccatcaatcat-agtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatg 148  Q
    ||||||||||||||||| |||||| | |||| ||||||||||| ||||| ||||||| ||| ||||  ||| | |   || ||||||| |||||||| ||    
T  40999631 gggtctcacttaagaccctcaatcttaagtgggacccacacttgtttaatattaaaagattgaaatataatgatataaagttattgatggttgattagtg 40999730  T
Q  149 agtttcatttaagaaatttgtgta 172  Q
     ||| |||||||||||||||||||    
T  40999731 ggttccatttaagaaatttgtgta 40999754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 32887741 - 32887560
Alignment:
Q  81 gacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtag 180  Q
    |||||||||| |||||| ||||||||||||||||| ||||| |   || |||| ||||||||||| || | || |||||| |||||| |||   || | |    
T  32887741 gacccacactcttttaatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtg-gatttatttaaaaaatttatgtgatatct-g 32887644  T
Q  181 gattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagta 264  Q
    |||||||  |||||| | ||||||||| || ||||||||||||||  |||||| || | | ||  ||| |||||||||||||||    
T  32887643 gattggagagattgaatgcttattaggcaccactattaaaaaattataaatgaatgttgtatacacgtaaaatctatttaagta 32887560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 166
Target Start/End: Original strand, 37074730 - 37074810
Alignment:
Q  76 agtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatt 166  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||          |||||||||||||||||||||| |||||||| |||||    
T  37074730 agtgagacacacacttttttaatattaaaaaattaaaatgaaat----------tattgatagttgattaatgagtctcatttaaaaaatt 37074810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 18970030 - 18970120
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaa 220  Q
    |||| ||||||||||| |||||||||||||||||||||||||  || |  |  ||| |  ||||||||  |||||||||||||||||||||    
T  18970030 tattaatagttgattagtgagtttcatttaagaaatttgtgtgagaggctgagttgaagagattgagtgtttattaggtactactattaaa 18970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 225
Target Start/End: Original strand, 28857055 - 28857207
Alignment:
Q  76 agtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgata---gttgattaatgagtttcatttaagaaatttgtgta 172  Q
    |||||||||||||||||||||| ||||||||||| | |||   ||| |   || |||| |||   |||||||| | ||| | ||||||||||||||||||    
T  28857055 agtgagacccacacttttttaatattaaaaaattgatatgtggtaatataaagttattaatactagttgattagtaagtcttatttaagaaatttgtgta 28857154  T
Q  173 tgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
     ||||  || ||||||||||| | | ||||||| ||| ||||| |||||||||    
T  28857155 agatgctgggttggaaggattaaattcttattaagtattactactaaaaaatt 28857207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 4755384 - 4755283
Alignment:
Q  142 attaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctg 241  Q
    |||||||||||  |||||||||||||||||  | ||| |  ||||||  |||||||| ||||||| || || ||||||||||||  ||||||||||| ||    
T  4755384 attaatgagttctatttaagaaatttgtgtgaggtgttgagttggaaaaattgagtatttattagataataatattaaaaaattataaatgagtgatatg 4755285  T
Q  242 ta 243  Q
    ||    
T  4755284 ta 4755283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 15269283 - 15269335
Alignment:
Q  183 ttggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagt 235  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||  ||||||||    
T  15269283 ttggagggattgaatacttattaggcactactattaaaaaattataaatgagt 15269335  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 37648334 - 37648278
Alignment:
Q  175 atgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaat 231  Q
    |||| |||||||| ||||||||| |||||||||||||| || ||||||||| |||||    
T  37648334 atgttggattggagggattgagtgcttattaggtactattactaaaaaattacaaat 37648278  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 3668925 - 3668967
Alignment:
Q  183 ttggaaggattgagtacttattaggtactactattaaaaaatt 225  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  3668925 ttggacggattgagtacttattaattactactattaaaaaatt 3668967  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 9583235 - 9583283
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    |||||||| |||||||| ||||||||||||||||||  |||| ||||||    
T  9583235 gattgagtgcttattagatactactattaaaaaattataaataagtgat 9583283  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 223
Target Start/End: Original strand, 46048835 - 46049010
Alignment:
Q  49 ggggtctcacttaagaccatcaatcata-gtgagacccacacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaat 147  Q
    |||||||||||||||||| |||||| || ||| |||||| || ||| ||| |||||||||||   ||| |||   |   || |||||||||||||||  |    
T  46048835 ggggtctcacttaagaccctcaatcttaagtgggacccaaacctttgtaatattaaaaaattgttatgtaatggtataaagttattgatagttgatttgt 46048934  T
Q  148 gagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaa 223  Q
    ||||| |||||||||| |||||||  ||||  |  ||||| ||||||  |||||||||||||||| ||||||||||    
T  46048935 gagttccatttaagaactttgtgtgagatgctgagttggagggattggatacttattaggtactaatattaaaaaa 46049010  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 13755240 - 13755130
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||  || ||  ||||||||||||||||||  || | ||| || || ||||||||| ||||||| |||||||||||||||||||  ||    
T  13755240 tattgatagttgatttttgggtcccatttaagaaatttgtgt--ga-gcagggttagagggattgagttcttattaagtactactattaaaaaattataa 13755144  T
Q  230 atgagtgatctgta 243  Q
    ||||||||| ||||    
T  13755143 atgagtgatgtgta 13755130  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 41212017 - 41212131
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||| |  || |||||||||||| |||| |  |||||  ||||||| ||||| | | |||||||||||||||||||| ||||||  ||    
T  41212017 tattgatagttgattagtatgtctcatttaagaaacttgtatgagatgttcgattggagggatttactgcttattaggtactactattacaaaattataa 41212116  T
Q  230 atgagtgatctgtat 244  Q
    |||||| || |||||    
T  41212117 atgagttatgtgtat 41212131  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 46006210 - 46006056
Alignment:
Q  87 cacttttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattgg 186  Q
    |||| |||||| ||||||||||||||||  ||| | |   || |||||||||||||||| || ||   ||||||||| |||||||| ||| | || ||||    
T  46006210 cactcttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattactgggtcaaatttaagaactttgtgtaagatctggg-ttgg 46006112  T
Q  187 aaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgta 243  Q
    |  |||||| |  ||||||||||||||||||||||||||  ||||||||||| ||||    
T  46006111 agtgattgaatg-ttattaggtactactattaaaaaattataaatgagtgatgtgta 46006056  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 13768641 - 13768531
Alignment:
Q  130 tattgatagttgattaatgagtttcatttaagaaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaa 229  Q
    |||||||||||||||  || ||  ||||||||||||||||||| |  ||    || || ||||||||| ||||||| |||||||||||||||||||  ||    
T  13768641 tattgatagttgatttgtgggtcccatttaagaaatttgtgtaagcagtg---ttagagggattgagttcttattaagtactactattaaaaaattataa 13768545  T
Q  230 atgagtgatctgta 243  Q
    ||||||||| ||||    
T  13768544 atgagtgatgtgta 13768531  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 36902451 - 36902374
Alignment:
Q  92 ttttaagattaaaaaattaaaatgcaataacacgtagatattgatagttgattaatgagtttcatttaagaaatttgt 169  Q
    |||||| ||||||||||||||||  ||| | |   || |||||||||||||||| ||| |||||||||||||||||||    
T  36902451 ttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgaatttcatttaagaaatttgt 36902374  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 40242243 - 40242167
Alignment:
Q  162 aaatttgtgtatgatgtaggattggaaggattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    ||||||| ||| ||||| || || |||| ||||||| ||||||||||| |||||||||||||||  |||| ||||||    
T  40242243 aaatttgagtaagatgttggtttagaagaattgagtgcttattaggtattactattaaaaaattataaataagtgat 40242167  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 29950816 - 29950768
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    |||||||| |||||||| |||||||||||||||| |  |||||||||||    
T  29950816 gattgagtgcttattagatactactattaaaaaaatataaatgagtgat 29950768  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 29999970 - 29999922
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatttcaaatgagtgat 238  Q
    |||||||| |||||||| |||||||||||||||| |  |||||||||||    
T  29999970 gattgagtgcttattagatactactattaaaaaaatataaatgagtgat 29999922  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 63644 - 63718
Alignment:
Q  190 gattgagtacttattaggtactactattaaaaaatttcaaatgagtgatctgtatgcgtgaaatctatttaagta 264  Q
    |||||||| |||||||||||||||||||||||||||  |||| |||||  ||||  ||||| | |||||||||||    
T  63644 gattgagtccttattaggtactactattaaaaaattataaattagtgacatgtacacgtgagacctatttaagta 63718  T

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