View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8981_low_189 (Length: 330)
Name: NF8981_low_189
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8981_low_189 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 18 - 320
Target Start/End: Original strand, 43725740 - 43726042
Alignment:
| Q |
18 |
aatgtcatattgtttagtggaaagtaaagatggatattcgtcgtcaactttggaattcaattcgccgccatgtagtggttcggttaaagctaagttgttg |
117 |
Q |
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| T |
43725740 |
aatgtcatattgtttagtggaaagtaaagatggatattcgtcgtcaactttggaattcaattcgccgccatgtagtggttcggttaaagctaagttgttg |
43725839 |
T |
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| Q |
118 |
caaaatccgaaggctgagaatttatactatgtgggactaaaaggaattaaagtgggaggtgaaaagatagatgttcctaattcaacattcactattgatc |
217 |
Q |
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| T |
43725840 |
caaaatccgaaggctgagaatttatactatgtgggactaaaaggaattaaagtgggaggtgaaaagatcgatgttcctaattcaacattcactattgatc |
43725939 |
T |
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| Q |
218 |
catatggaaacggaggtatgattgtaagttcaagtagtttaataacgatgttggagaatgacacctataatgtcgtgcgtgatgcttttgtggccaagac |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43725940 |
catatggaaacggaggtatgattgtaagttcaagtagtttaataacgatgttggagaatgacacctataatgtcgtgcgtgatgcttttgtggccaagac |
43726039 |
T |
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| Q |
318 |
tca |
320 |
Q |
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| T |
43726040 |
tca |
43726042 |
T |
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