View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8981_low_2 (Length: 1156)

Name: NF8981_low_2
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8981_low_2
NF8981_low_2
[»] chr3 (56 HSPs)
chr3 (434-1156)||(34898023-34898750)
chr3 (19-282)||(34897676-34897940)
chr3 (260-385)||(1995448-1995573)
chr3 (271-345)||(52859272-52859346)
chr3 (277-385)||(19830394-19830502)
chr3 (277-385)||(27033655-27033763)
chr3 (277-385)||(43719910-43720018)
chr3 (275-385)||(10474400-10474509)
chr3 (316-385)||(2229987-2230056)
chr3 (277-385)||(29586340-29586447)
chr3 (278-381)||(44637950-44638052)
chr3 (311-385)||(54911658-54911732)
chr3 (312-385)||(33632827-33632899)
chr3 (316-385)||(34373835-34373904)
chr3 (277-373)||(24754673-24754769)
chr3 (277-373)||(24763670-24763766)
chr3 (270-385)||(48084823-48084939)
chr3 (322-385)||(34373593-34373656)
chr3 (312-385)||(31523666-31523739)
chr3 (277-385)||(51982549-51982656)
chr3 (1113-1156)||(32144671-32144714)
chr3 (275-344)||(30235416-30235484)
chr3 (277-382)||(40851781-40851886)
chr3 (312-385)||(42613084-42613157)
chr3 (316-385)||(46167397-46167466)
chr3 (312-385)||(49679268-49679341)
chr3 (320-384)||(25285843-25285907)
chr3 (1113-1153)||(39966014-39966054)
chr3 (282-370)||(47750274-47750361)
chr3 (1113-1156)||(2523013-2523056)
chr3 (1113-1156)||(4139087-4139130)
chr3 (1113-1156)||(6919903-6919946)
chr3 (1113-1156)||(7270042-7270085)
chr3 (1117-1156)||(10176847-10176886)
chr3 (1113-1156)||(10482793-10482836)
chr3 (1113-1156)||(16906759-16906802)
chr3 (1113-1156)||(18194425-18194468)
chr3 (1113-1156)||(19879288-19879331)
chr3 (1113-1156)||(26942840-26942883)
chr3 (1113-1156)||(30555167-30555210)
chr3 (1113-1156)||(31327441-31327484)
chr3 (1113-1156)||(32828528-32828571)
chr3 (1113-1156)||(33225288-33225331)
chr3 (1113-1156)||(33706667-33706710)
chr3 (1113-1156)||(37800551-37800594)
chr3 (1113-1156)||(40548390-40548433)
chr3 (1113-1156)||(40933771-40933814)
chr3 (1113-1156)||(41936347-41936390)
chr3 (1113-1156)||(46795869-46795912)
chr3 (1113-1156)||(48251659-48251702)
chr3 (1113-1156)||(50496754-50496797)
chr3 (1113-1156)||(50727184-50727227)
chr3 (1113-1156)||(50785621-50785664)
chr3 (1113-1156)||(53163681-53163724)
chr3 (1113-1156)||(53432677-53432720)
chr3 (312-373)||(550814-550875)
[»] chr6 (32 HSPs)
chr6 (269-385)||(7215807-7215923)
chr6 (269-385)||(2800566-2800682)
chr6 (268-385)||(4804452-4804569)
chr6 (277-385)||(7162088-7162196)
chr6 (277-385)||(21159332-21159440)
chr6 (319-385)||(27826542-27826608)
chr6 (277-385)||(17828532-17828639)
chr6 (277-385)||(17944166-17944274)
chr6 (316-385)||(12412641-12412710)
chr6 (316-385)||(13089751-13089820)
chr6 (279-373)||(23936269-23936365)
chr6 (312-385)||(24484883-24484956)
chr6 (277-385)||(227526-227635)
chr6 (314-385)||(32254031-32254102)
chr6 (316-385)||(1249150-1249217)
chr6 (270-312)||(9952993-9953035)
chr6 (312-385)||(13888520-13888594)
chr6 (312-385)||(2142291-2142364)
chr6 (336-385)||(29698167-29698216)
chr6 (1113-1156)||(2816977-2817020)
chr6 (1113-1156)||(5052014-5052057)
chr6 (1113-1156)||(7207931-7207974)
chr6 (1113-1156)||(7328587-7328630)
chr6 (1113-1156)||(8857170-8857213)
chr6 (1113-1156)||(13116564-13116607)
chr6 (1113-1156)||(19953768-19953811)
chr6 (1113-1156)||(28148673-28148716)
chr6 (1113-1156)||(33646922-33646965)
chr6 (1114-1156)||(3794114-3794156)
chr6 (312-381)||(7545645-7545715)
chr6 (320-358)||(9954332-9954370)
chr6 (1115-1153)||(31935189-31935227)
[»] chr1 (37 HSPs)
chr1 (269-385)||(39426214-39426330)
chr1 (268-385)||(32887735-32887851)
chr1 (273-385)||(26860010-26860121)
chr1 (271-357)||(35534741-35534825)
chr1 (277-385)||(26372256-26372362)
chr1 (277-385)||(50294026-50294134)
chr1 (312-385)||(5047379-5047452)
chr1 (316-385)||(12151771-12151840)
chr1 (277-385)||(32618805-32618911)
chr1 (316-373)||(7840681-7840738)
chr1 (270-385)||(18976260-18976376)
chr1 (277-385)||(50484390-50484498)
chr1 (311-381)||(24977248-24977318)
chr1 (312-385)||(30077642-30077715)
chr1 (266-385)||(5854799-5854917)
chr1 (1113-1156)||(34058301-34058344)
chr1 (323-385)||(24413291-24413353)
chr1 (316-385)||(48327156-48327224)
chr1 (312-385)||(52280037-52280110)
chr1 (1113-1156)||(1570132-1570175)
chr1 (1113-1156)||(6129973-6130016)
chr1 (1113-1156)||(6438004-6438047)
chr1 (1113-1156)||(6702663-6702706)
chr1 (1113-1156)||(12502194-12502237)
chr1 (1113-1156)||(15819541-15819584)
chr1 (1113-1156)||(21265743-21265786)
chr1 (1113-1156)||(25999937-25999980)
chr1 (1113-1156)||(26584686-26584729)
chr1 (1113-1156)||(32594338-32594381)
chr1 (1113-1156)||(40519483-40519526)
chr1 (1113-1156)||(46965827-46965870)
chr1 (1117-1156)||(47642926-47642965)
chr1 (278-332)||(49384627-49384680)
chr1 (328-385)||(12380924-12380981)
chr1 (328-385)||(12384991-12385048)
chr1 (1113-1154)||(32995091-32995132)
chr1 (1115-1156)||(49753459-49753500)
[»] chr2 (42 HSPs)
chr2 (271-384)||(30709115-30709228)
chr2 (270-385)||(4446852-4446967)
chr2 (268-385)||(19908784-19908899)
chr2 (270-345)||(30217517-30217592)
chr2 (269-385)||(31618724-31618838)
chr2 (277-385)||(13238685-13238793)
chr2 (277-385)||(35316829-35316937)
chr2 (294-385)||(15709772-15709862)
chr2 (320-385)||(28564896-28564961)
chr2 (273-385)||(30857638-30857749)
chr2 (269-339)||(30721564-30721632)
chr2 (294-385)||(36929720-36929810)
chr2 (270-383)||(2063359-2063472)
chr2 (312-385)||(8988859-8988932)
chr2 (311-384)||(34512022-34512095)
chr2 (312-385)||(35315286-35315359)
chr2 (312-385)||(38397085-38397158)
chr2 (313-385)||(21454494-21454565)
chr2 (312-385)||(374997-375070)
chr2 (316-385)||(23259489-23259558)
chr2 (411-453)||(6946245-6946287)
chr2 (294-384)||(15722239-15722328)
chr2 (277-343)||(22061433-22061498)
chr2 (312-381)||(19905889-19905958)
chr2 (312-385)||(23459844-23459917)
chr2 (1116-1149)||(42756259-42756292)
chr2 (270-370)||(35315521-35315620)
chr2 (1113-1156)||(1260271-1260314)
chr2 (1113-1156)||(1309066-1309109)
chr2 (1113-1156)||(6331648-6331691)
chr2 (1113-1156)||(11050697-11050740)
chr2 (1113-1156)||(11190015-11190058)
chr2 (1113-1156)||(17499036-17499079)
chr2 (1113-1156)||(18694872-18694915)
chr2 (1113-1156)||(19281695-19281738)
chr2 (1113-1156)||(36005529-36005572)
chr2 (1113-1156)||(38400401-38400444)
chr2 (1113-1156)||(39408630-39408673)
chr2 (1113-1156)||(41509603-41509646)
chr2 (319-385)||(4603114-4603180)
chr2 (271-320)||(6946335-6946384)
chr2 (1107-1156)||(38557157-38557206)
[»] chr8 (38 HSPs)
chr8 (271-385)||(42761717-42761831)
chr8 (268-385)||(21360280-21360400)
chr8 (316-385)||(30426671-30426740)
chr8 (277-385)||(28069723-28069831)
chr8 (277-385)||(36991360-36991468)
chr8 (294-385)||(18689495-18689585)
chr8 (294-385)||(24557162-24557252)
chr8 (312-385)||(26749546-26749619)
chr8 (275-385)||(42338008-42338117)
chr8 (277-385)||(6014198-6014307)
chr8 (314-385)||(36748492-36748562)
chr8 (321-385)||(10672519-10672583)
chr8 (312-368)||(17520403-17520459)
chr8 (1113-1156)||(13406687-13406730)
chr8 (268-385)||(10652571-10652688)
chr8 (316-381)||(40695249-40695314)
chr8 (313-385)||(34612568-34612640)
chr8 (270-385)||(45113274-45113390)
chr8 (1113-1156)||(257626-257669)
chr8 (1113-1156)||(658251-658294)
chr8 (1113-1156)||(843987-844030)
chr8 (1113-1156)||(2787021-2787064)
chr8 (1113-1156)||(10568172-10568215)
chr8 (1113-1156)||(17698609-17698652)
chr8 (1113-1156)||(18926075-18926118)
chr8 (1113-1156)||(28909552-28909595)
chr8 (1113-1156)||(33473295-33473338)
chr8 (1113-1156)||(37717450-37717493)
chr8 (267-358)||(37966397-37966487)
chr8 (1113-1156)||(38219508-38219551)
chr8 (1113-1156)||(39587634-39587677)
chr8 (1113-1156)||(43186940-43186983)
chr8 (1114-1156)||(1632381-1632423)
chr8 (266-332)||(20169125-20169190)
chr8 (320-385)||(24102020-24102085)
chr8 (336-385)||(28318924-28318973)
chr8 (316-385)||(41511266-41511335)
chr8 (336-385)||(44859189-44859238)
[»] chr7 (52 HSPs)
chr7 (924-1026)||(46115140-46115242)
chr7 (716-917)||(46115291-46115506)
chr7 (277-385)||(4888471-4888579)
chr7 (270-359)||(47270580-47270668)
chr7 (316-385)||(25084730-25084799)
chr7 (272-385)||(40023215-40023327)
chr7 (277-385)||(9559017-9559125)
chr7 (270-385)||(39855770-39855884)
chr7 (316-385)||(12139330-12139400)
chr7 (312-385)||(32915960-32916033)
chr7 (269-385)||(33450510-33450627)
chr7 (312-385)||(47799898-47799971)
chr7 (277-385)||(7712331-7712438)
chr7 (308-364)||(29844316-29844372)
chr7 (278-385)||(989133-989239)
chr7 (270-384)||(7373872-7373985)
chr7 (281-385)||(7362572-7362676)
chr7 (277-385)||(16366522-16366630)
chr7 (277-385)||(21151156-21151264)
chr7 (268-385)||(47500236-47500354)
chr7 (312-385)||(8149613-8149686)
chr7 (316-385)||(45260429-45260498)
chr7 (278-385)||(29631052-29631156)
chr7 (277-369)||(44647984-44648076)
chr7 (314-385)||(24193597-24193668)
chr7 (1113-1156)||(41699726-41699769)
chr7 (1113-1156)||(47999867-47999910)
chr7 (268-385)||(18198260-18198377)
chr7 (312-385)||(30588539-30588612)
chr7 (277-345)||(5463867-5463934)
chr7 (1113-1156)||(2229062-2229105)
chr7 (1113-1156)||(3062861-3062904)
chr7 (1113-1156)||(7525531-7525574)
chr7 (1113-1156)||(10244829-10244872)
chr7 (1113-1156)||(12640529-12640572)
chr7 (311-381)||(19027680-19027751)
chr7 (311-381)||(20726885-20726956)
chr7 (1113-1156)||(24781117-24781160)
chr7 (1113-1156)||(24880392-24880435)
chr7 (1113-1156)||(26801669-26801712)
chr7 (1113-1156)||(27510197-27510240)
chr7 (1113-1156)||(29617492-29617535)
chr7 (1113-1156)||(32676882-32676925)
chr7 (1113-1156)||(35645686-35645729)
chr7 (1113-1156)||(35950215-35950258)
chr7 (282-385)||(38365659-38365761)
chr7 (1113-1156)||(43119372-43119415)
chr7 (314-373)||(46802331-46802390)
chr7 (266-332)||(44390835-44390900)
chr7 (1112-1153)||(9697830-9697871)
chr7 (299-356)||(18064588-18064643)
chr7 (277-385)||(47226039-47226145)
[»] chr5 (42 HSPs)
chr5 (277-385)||(29340999-29341106)
chr5 (277-385)||(35660572-35660680)
chr5 (278-385)||(4895699-4895806)
chr5 (277-385)||(11775797-11775905)
chr5 (277-385)||(18625384-18625492)
chr5 (277-385)||(32129580-32129688)
chr5 (277-385)||(37266735-37266843)
chr5 (277-384)||(43309113-43309220)
chr5 (316-385)||(14349807-14349876)
chr5 (312-385)||(31653039-31653112)
chr5 (316-385)||(40753164-40753233)
chr5 (277-385)||(13032122-13032230)
chr5 (294-385)||(34827196-34827287)
chr5 (279-385)||(39902419-39902525)
chr5 (312-385)||(10362012-10362085)
chr5 (312-385)||(36290606-36290679)
chr5 (313-385)||(2984389-2984461)
chr5 (1113-1156)||(24033164-24033207)
chr5 (275-341)||(9460597-9460662)
chr5 (312-382)||(27428879-27428949)
chr5 (312-385)||(3057152-3057225)
chr5 (320-381)||(14688582-14688643)
chr5 (312-365)||(18653385-18653438)
chr5 (1105-1153)||(28308324-28308372)
chr5 (313-385)||(31279918-31279990)
chr5 (1113-1156)||(2301511-2301554)
chr5 (1113-1156)||(4745816-4745859)
chr5 (1113-1156)||(6518716-6518759)
chr5 (1113-1156)||(8968836-8968879)
chr5 (1113-1156)||(11795580-11795623)
chr5 (1113-1156)||(12463843-12463886)
chr5 (1113-1156)||(25400307-25400350)
chr5 (1113-1156)||(27765344-27765387)
chr5 (1113-1156)||(30641575-30641618)
chr5 (1113-1156)||(32505775-32505818)
chr5 (1113-1156)||(42320404-42320447)
chr5 (322-385)||(43222130-43222193)
chr5 (1114-1156)||(2848300-2848342)
chr5 (331-385)||(4592804-4592858)
chr5 (270-304)||(21213953-21213987)
chr5 (312-385)||(31546490-31546563)
chr5 (312-385)||(41660110-41660183)
[»] chr4 (56 HSPs)
chr4 (277-385)||(19901881-19901989)
chr4 (277-382)||(23610649-23610754)
chr4 (277-385)||(5416429-5416536)
chr4 (272-373)||(36532641-36532741)
chr4 (268-385)||(56558283-56558400)
chr4 (273-385)||(1871281-1871392)
chr4 (270-385)||(56453777-56453891)
chr4 (269-340)||(15178628-15178699)
chr4 (311-385)||(5763159-5763233)
chr4 (312-385)||(56269074-56269147)
chr4 (277-385)||(3952133-3952241)
chr4 (277-385)||(34778425-34778533)
chr4 (278-364)||(5815267-5815350)
chr4 (274-385)||(42844148-42844258)
chr4 (312-385)||(23474115-23474188)
chr4 (316-385)||(24073620-24073689)
chr4 (312-385)||(48914516-48914589)
chr4 (277-385)||(18207003-18207111)
chr4 (312-385)||(5524451-5524524)
chr4 (275-385)||(13493276-13493387)
chr4 (320-385)||(30567905-30567970)
chr4 (275-340)||(33841766-33841830)
chr4 (312-385)||(36688186-36688259)
chr4 (272-372)||(47922324-47922425)
chr4 (312-385)||(50483554-50483627)
chr4 (277-385)||(33247093-33247201)
chr4 (277-385)||(39862521-39862629)
chr4 (1113-1156)||(7686202-7686245)
chr4 (319-385)||(33262557-33262623)
chr4 (312-385)||(1015852-1015925)
chr4 (277-385)||(12312438-12312547)
chr4 (349-385)||(46804635-46804671)
chr4 (1113-1156)||(3035995-3036038)
chr4 (1113-1156)||(3904430-3904473)
chr4 (1113-1156)||(6371201-6371244)
chr4 (1113-1156)||(8433563-8433606)
chr4 (1113-1156)||(10141070-10141113)
chr4 (1113-1156)||(12167557-12167600)
chr4 (1113-1156)||(21380118-21380161)
chr4 (1113-1156)||(35948123-35948166)
chr4 (1113-1156)||(40994043-40994086)
chr4 (1113-1156)||(43147324-43147367)
chr4 (1113-1156)||(43596982-43597025)
chr4 (1113-1156)||(46105622-46105665)
chr4 (1113-1156)||(46774970-46775013)
chr4 (1113-1156)||(48950871-48950914)
chr4 (1113-1156)||(49901569-49901612)
chr4 (1113-1156)||(53634191-53634234)
chr4 (347-385)||(12241441-12241479)
chr4 (319-385)||(38079725-38079791)
chr4 (311-348)||(5817976-5818013)
chr4 (1112-1153)||(13564207-13564248)
chr4 (283-368)||(36003216-36003300)
chr4 (312-385)||(37002249-37002322)
chr4 (312-385)||(42010121-42010194)
chr4 (1115-1156)||(54015818-54015859)
[»] scaffold0062 (2 HSPs)
scaffold0062 (294-385)||(58684-58774)
scaffold0062 (294-384)||(70796-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (316-385)||(7151-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (312-385)||(29567-29640)
[»] scaffold0012 (1 HSPs)
scaffold0012 (277-385)||(208067-208175)
[»] scaffold0035 (1 HSPs)
scaffold0035 (316-385)||(16399-16468)
[»] scaffold0008 (1 HSPs)
scaffold0008 (316-385)||(9203-9272)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1113-1156)||(11060-11103)
scaffold0187 (1113-1156)||(21388-21431)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1113-1156)||(18419-18462)
[»] scaffold0171 (1 HSPs)
scaffold0171 (319-385)||(17311-17377)
[»] scaffold1185 (1 HSPs)
scaffold1185 (1113-1156)||(2333-2376)
[»] scaffold0275 (1 HSPs)
scaffold0275 (1113-1156)||(8907-8950)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1113-1156)||(17707-17750)
[»] scaffold0126 (1 HSPs)
scaffold0126 (322-385)||(22450-22513)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1113-1156)||(10766-10809)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1113-1156)||(112195-112238)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1113-1156)||(12201-12244)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1113-1156)||(266645-266688)
[»] scaffold1213 (1 HSPs)
scaffold1213 (1113-1154)||(593-634)


Alignment Details
Target: chr3 (Bit Score: 655; Significance: 0; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 655; E-Value: 0
Query Start/End: Original strand, 434 - 1156
Target Start/End: Original strand, 34898023 - 34898750
Alignment:
Q  434 aaaatggagaagatcttgactcgagtgggaggtattgagtgaatgaatgaacatatcttgattggtagtaacatgtcccttatatagacgtaagatgtat 533  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34898023 aaaatggagaagatcttgactcgagtgggaggtattgagtgaatgaatgaacatatcttgattggtagtaacatgtcccttatatagacgtaagatgtat 34898122  T
Q  534 aatattgagtttgacgactcactggatcttacgttgtaaacgaaggaatatcatgcggattaagcatttgaccaagaacaaatatatttgatgtaaatga 633  Q
    | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34898123 agtattgagtttgatgactcactgaatcttacgttgtaaacgaaggaatatcatgcggattgagcatttgaccaagaacaaatatatttgatgtaaatga 34898222  T
Q  634 tcccttttgcctattgtatgaatggtttacatatccatttgattgtat----gcttagataggtttggttgtattttggactgttgatttgtatttttct 729  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34898223 tcccttttgcctattgtatgaatggtttacatatccatttgattgtatatatgcttagataggtttggttgtattttggacggttgatttgtatttttct 34898322  T
Q  730 tagaaatttatagaaaaacaaaactatttacttcacaccattcactgccatgtttaagaccggcaacaaaaatttcttagaacgacagtttcaaactcta 829  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34898323 tagaaatttaaagaaaaacaaaactatttacttcacaccattcactgccatgtttaagaccggcaacaaaaatttcttagaacgacagtttcaaactcta 34898422  T
Q  830 aagatactgaaagtgcaccaagaagtatgccaagccaacatatgagggaacaatcaaatgaaattcaagagcaaataaattatgacatccagtgcctcta 929  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34898423 aagatactgaaagtgcaccaagaagtatgccaagccaacatatgagggaacaatcaaatgaaattcaagagcaaataaattatgacatccaatgcctcta 34898522  T
Q  930 taaaataaggaatggtcaaaataaagatcatataatcacagtgaaaaatgttgaactagtatcaatagccaagagcaaagataaacattgaagcatatga 1029  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34898523 taaaataaggaatggtcaaaataaagatcatataatcacagtgaaaaatgttgaactagtatcaatagccaagagcaaagataaacatagaagcatatga 34898622  T
Q  1030 agtgtaacgggttcgaattgaaatagttccttgattgtcgaacgaagagaaattaacttccgttcagaaacaacaatagtttc-ttttttggtcaagtaa 1128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34898623 agtgtaacgggttcgaattgaaatagttccttgattgtcgaacgaagggaaattaacttccgttcagaaacaacaatagtttctttttttggtcaagtaa 34898722  T
Q  1129 cataatggctagagctcacacaatttaa 1156  Q
      || |||||||||||||||||||||||    
T  34898723 tctagtggctagagctcacacaatttaa 34898750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 34897676 - 34897940
Alignment:
Q  19 attgggacatgagttcggtgtggggagaggaggaataggagagatgatataaaaaccctctctccatttcttaaatgttgtagaaatggacaaatcagct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34897676 attgggacatgagttcggtgtggggagaggaggaataggagagatgatataaaaaccctctctccatttcttaaatgttgtagaaatggacaaatcagct 34897775  T
Q  119 gatnnnnnnnn-tagaagtggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtt 217  Q
    |||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34897776 gataaaaaaaaatagaagtggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtt 34897875  T
Q  218 tttggagaatttgttggaatccaagtcaacatgtaatagaggtgggtgagaggggttaggatcct 282  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34897876 tttggagaatttgtcggaatccaagtcaacatgtaattgaggtgggtgagaggggttaggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 260 - 385
Target Start/End: Complemental strand, 1995573 - 1995448
Alignment:
Q  260 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 359  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  360 taagtgggtcccactatcattaatta 385  Q
    |||||| ||| ||| |||||||||||    
T  1995473 taagtgagtctcaccatcattaatta 1995448  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  271 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 345  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 19830394 - 19830502
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  377 cattaatta 385  Q
    |||||||||    
T  19830494 cattaatta 19830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 27033763 - 27033655
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  377 cattaatta 385  Q
    |||||||||    
T  27033663 cattaatta 27033655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 43719910 - 43720018
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  377 cattaatta 385  Q
    |||||||||    
T  43720010 cattaatta 43720018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 275 - 385
Target Start/End: Original strand, 10474400 - 10474509
Alignment:
Q  275 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 374  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| || ||||     
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccacc 10474498  T
Q  375 atcattaatta 385  Q
    | |||||||||    
T  10474499 aacattaatta 10474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 2230056 - 2229987
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaatta 2229987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 29586447 - 29586340
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  377 cattaatta 385  Q
    |||||||||    
T  29586348 cattaatta 29586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 381
Target Start/End: Complemental strand, 44638052 - 44637950
Alignment:
Q  278 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 377  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  378 atta 381  Q
    ||||    
T  44637953 atta 44637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 54911732 - 54911658
Alignment:
Q  311 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| |||||||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 33632899 - 33632827
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | |||| |||||||||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaaatggattccac-atcattaatta 33632827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 34373904 - 34373835
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaatta 34373835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 48084939 - 48084823
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 368  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  369 cccactatcattaatta 385  Q
    ||||  |||||||||||    
T  48084839 cccatcatcattaatta 48084823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 34373593 - 34373656
Alignment:
Q  322 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 34373656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 31523666 - 31523739
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 31523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 51982549 - 51982656
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| ||||||||| || | |  ||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcat 51982647  T
Q  377 cattaatta 385  Q
    |||||||||    
T  51982648 cattaatta 51982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 32144714 - 32144671
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  32144714 ttttttggtcaagtaacctagtggctagagctcacacaatttaa 32144671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  275 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 344  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 382
Target Start/End: Complemental strand, 40851886 - 40851781
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  377 cattaa 382  Q
    ||||||    
T  40851786 cattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 42613157 - 42613084
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 42613084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 46167466 - 46167397
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||| || || ||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaatta 46167397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 49679268 - 49679341
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 49679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 25285843 - 25285907
Alignment:
Q  320 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 384  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| ||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaatt 25285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1113 - 1153
Target Start/End: Original strand, 39966014 - 39966054
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatt 1153  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  39966014 tttttttgtcaagtagcataatggctagagctcacacaatt 39966054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 47750274 - 47750361
Alignment:
Q  282 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 370  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcc 47750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 2523056 - 2523013
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  2523056 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 2523013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 4139130 - 4139087
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  4139130 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 4139087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 6919903 - 6919946
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  6919903 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 6919946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 7270085 - 7270042
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  7270085 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 7270042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1117 - 1156
Target Start/End: Original strand, 10176847 - 10176886
Alignment:
Q  1117 ttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  10176847 ttggtcaagtagcatagtggctagagctcacacaatttaa 10176886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 10482793 - 10482836
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  10482793 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 10482836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 16906759 - 16906802
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| |||| |||||||||||||||||||||||    
T  16906759 tttttttgtcaagtagcatagtggctagagctcacacaatttaa 16906802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 18194468 - 18194425
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  18194468 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 18194425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 19879331 - 19879288
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| |||| |||||||||||||||||||||||    
T  19879331 tttttttgtcaagtagcatagtggctagagctcacacaatttaa 19879288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 26942883 - 26942840
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  26942883 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 26942840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 30555167 - 30555210
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  30555167 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 31327441 - 31327484
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  31327441 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 31327484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 32828571 - 32828528
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  32828571 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 32828528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 33225288 - 33225331
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  33225288 ttttttggtcaagtagcttagtggctagagctcacacaatttaa 33225331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 33706667 - 33706710
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  33706667 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 33706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 37800551 - 37800594
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  37800551 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 37800594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 40548433 - 40548390
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  40548433 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 40548390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 40933771 - 40933814
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  40933771 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 40933814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 41936347 - 41936390
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  41936347 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 41936390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 46795869 - 46795912
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  46795869 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 46795912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 48251702 - 48251659
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  48251702 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 48251659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 50496754 - 50496797
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  50496754 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 50496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 50727184 - 50727227
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  50727184 ttttttggtcaagtagcttagtggctagagctcacacaatttaa 50727227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 50785664 - 50785621
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  50785664 ttttttggtcaagtagcttagtggctagagctcacacaatttaa 50785621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 53163724 - 53163681
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  53163724 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 53163681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 53432677 - 53432720
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  53432677 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 53432720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 550814 - 550875
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| |||||||||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccac 550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 1e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 7215807 - 7215923
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  369 cccactatcattaatta 385  Q
    |||||||||||||||||    
T  7215907 cccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 2800566 - 2800682
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  369 cccactatcattaatta 385  Q
    ||||| |||||| ||||    
T  2800666 cccaccatcattgatta 2800682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 4804569 - 4804452
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 367  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  368 tcccactatcattaatta 385  Q
    |||||| |||||||||||    
T  4804469 tcccaccatcattaatta 4804452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 7162196 - 7162088
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  377 cattaatta 385  Q
    |||||||||    
T  7162096 cattaatta 7162088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 21159332 - 21159440
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  377 cattaatta 385  Q
    |||||||||    
T  21159432 cattaatta 21159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 27826608 - 27826542
Alignment:
Q  319 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 27826542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 17828532 - 17828639
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||  ||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcat 17828630  T
Q  377 cattaatta 385  Q
    || ||||||    
T  17828631 caataatta 17828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 17944274 - 17944166
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  377 cattaatta 385  Q
    |||||||||    
T  17944174 cattaatta 17944166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 12412710 - 12412641
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaatta 12412641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 13089751 - 13089820
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaatta 13089820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 373
Target Start/End: Complemental strand, 23936365 - 23936269
Alignment:
Q  279 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | |||||||||||||||||||||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccac 23936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 24484956 - 24484883
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaatta 24484883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 227526 - 227635
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 375  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||  |    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  376 tcattaatta 385  Q
    ||||| ||||    
T  227626 tcattgatta 227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 32254031 - 32254102
Alignment:
Q  314 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaatta 32254102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 1249150 - 1249217
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 1249217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 270 - 312
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacac 312  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 13888520 - 13888594
Alignment:
Q  312 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  |||||||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaatta 13888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 2142291 - 2142364
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaatta 2142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 29698216 - 29698167
Alignment:
Q  336 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcattaatta 29698167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 2817020 - 2816977
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  2817020 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 2816977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 5052014 - 5052057
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  5052014 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 5052057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 7207974 - 7207931
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  7207974 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 7207931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 7328587 - 7328630
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  7328587 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 7328630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 8857213 - 8857170
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  8857213 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 8857170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 13116564 - 13116607
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  13116564 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 13116607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 19953768 - 19953811
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  19953768 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 19953811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 28148673 - 28148716
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  28148673 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 28148716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 33646965 - 33646922
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  33646965 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 33646922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1114 - 1156
Target Start/End: Original strand, 3794114 - 3794156
Alignment:
Q  1114 tttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||||||||||| | || |||||||||||||||||||||||    
T  3794114 tttttggtcaagtagcctagtggctagagctcacacaatttaa 3794156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  312 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  320 agagagatagacacataaaatagataatgggtcctacca 358  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1115 - 1153
Target Start/End: Complemental strand, 31935227 - 31935189
Alignment:
Q  1115 ttttggtcaagtaacataatggctagagctcacacaatt 1153  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  31935227 ttttggtcaagtaacctaatggctagagcttacacaatt 31935189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 1e-44; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 39426330 - 39426214
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  369 cccactatcattaatta 385  Q
    |||||||||||||||||    
T  39426230 cccactatcattaatta 39426214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 268 - 385
Target Start/End: Original strand, 32887735 - 32887851
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 367  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  368 tcccactatcattaatta 385  Q
    |||||| |||||||||||    
T  32887834 tcccaccatcattaatta 32887851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 26860010 - 26860121
Alignment:
Q  273 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 372  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  373 ctatcattaatta 385  Q
    | |||||||||||    
T  26860109 caatcattaatta 26860121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 271 - 357
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  271 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 357  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 26372362 - 26372256
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |     
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccac 26372265  T
Q  377 cattaatta 385  Q
    |||||||||    
T  26372264 cattaatta 26372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 50294026 - 50294134
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  377 cattaatta 385  Q
    |||||||||    
T  50294126 cattaatta 50294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 5047379 - 5047452
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaatta 5047452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 12151840 - 12151771
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaatta 12151771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 32618911 - 32618805
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  377 cattaatta 385  Q
    |||||||||    
T  32618813 cattaatta 32618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 18976260 - 18976376
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 368  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  369 cccactatcattaatta 385  Q
    ||||  |||||||||||    
T  18976360 cccatcatcattaatta 18976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 50484498 - 50484390
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||  |    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgt 50484399  T
Q  377 cattaatta 385  Q
    |||||||||    
T  50484398 cattaatta 50484390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 24977318 - 24977248
Alignment:
Q  311 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| |||||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcatta 24977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 30077642 - 30077715
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaatta 30077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 385
Target Start/End: Original strand, 5854799 - 5854917
Alignment:
Q  266 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 365  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  366 ggtcccactatcattaatta 385  Q
    | |||||  |||||||||||    
T  5854898 gatcccatcatcattaatta 5854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 34058344 - 34058301
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  34058344 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 34058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 24413291 - 24413353
Alignment:
Q  323 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaatta 24413353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 48327156 - 48327224
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||| | |||||||||  || ||||||||| ||||||||| |||| |||||||||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaatta 48327224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 52280037 - 52280110
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 52280110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 1570132 - 1570175
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  1570132 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 1570175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 6129973 - 6130016
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||    
T  6129973 ttttttggtcaagtagcctaacggctagagctcacacaatttaa 6130016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 6438004 - 6438047
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  6438004 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 6438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 6702706 - 6702663
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  6702706 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 6702663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 12502194 - 12502237
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  12502194 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 12502237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 15819541 - 15819584
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  15819541 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 15819584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 21265786 - 21265743
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  21265786 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 21265743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 25999980 - 25999937
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||||  || |||||||||||||||||||||||    
T  25999980 ttttttggtcaagtaatctagtggctagagctcacacaatttaa 25999937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 26584686 - 26584729
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  26584686 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 26584729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 32594381 - 32594338
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  32594381 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 32594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 40519483 - 40519526
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  40519483 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 40519526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 46965870 - 46965827
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  46965870 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 46965827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1117 - 1156
Target Start/End: Original strand, 47642926 - 47642965
Alignment:
Q  1117 ttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  47642926 ttggtcaagtagcatagtggctagagctcacacaatttaa 47642965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  278 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 332  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 12380924 - 12380981
Alignment:
Q  328 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12380981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 12384991 - 12385048
Alignment:
Q  328 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaatta 12385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1113 - 1154
Target Start/End: Complemental strand, 32995132 - 32995091
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaattt 1154  Q
    ||||||||||||||| | || |||||||||||||||||||||    
T  32995132 ttttttggtcaagtagcctagtggctagagctcacacaattt 32995091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1115 - 1156
Target Start/End: Original strand, 49753459 - 49753500
Alignment:
Q  1115 ttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| || ||||||||| |||||||||||||    
T  49753459 ttttggtcaagtaacctagtggctagagttcacacaatttaa 49753500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 9e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 271 - 384
Target Start/End: Complemental strand, 30709228 - 30709115
Alignment:
Q  271 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 370  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  371 cactatcattaatt 384  Q
    ||| ||||||||||    
T  30709128 caccatcattaatt 30709115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 4446852 - 4446967
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 369  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  370 ccactatcattaatta 385  Q
     |||||||||||||||    
T  4446952 tcactatcattaatta 4446967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 19908899 - 19908784
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 367  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  368 tcccactatcattaatta 385  Q
    |||||| |||||||||||    
T  19908801 tcccaccatcattaatta 19908784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 270 - 345
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 345  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 31618724 - 31618838
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  369 cccactatcattaatta 385  Q
    ||||| |||||||||||    
T  31618822 cccacaatcattaatta 31618838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 13238793 - 13238685
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  377 cattaatta 385  Q
    |||||||||    
T  13238693 cattaatta 13238685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 35316937 - 35316829
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  377 cattaatta 385  Q
    |||||||||    
T  35316837 cattaatta 35316829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 15709862 - 15709772
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 28564961 - 28564896
Alignment:
Q  320 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 28564896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 30857638 - 30857749
Alignment:
Q  273 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 372  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  373 ctatcattaatta 385  Q
    | |||||||||||    
T  30857737 ccatcattaatta 30857749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 339
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 339  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 36929810 - 36929720
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || ||||||||||||| ||| | || | |||||||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaatta 36929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 2063472 - 2063359
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 368  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  369 cccactatcattaat 383  Q
     |||| |||||||||    
T  2063373 tccaccatcattaat 2063359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 8988932 - 8988859
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaatta 8988859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 34512022 - 34512095
Alignment:
Q  311 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 384  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| ||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaatt 34512095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 35315286 - 35315359
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || ||||||| || ||||||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaatta 35315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 38397158 - 38397085
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| |||| ||||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataatta 38397085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 21454494 - 21454565
Alignment:
Q  313 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcattaatta 21454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 375070 - 374997
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaatta 374997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 23259489 - 23259558
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaatta 23259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 6946287 - 6946245
Alignment:
Q  411 gagtctatatctctccaaatgaaaaaatggagaagatcttgac 453  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  6946287 gagtctatatctctccaaattaaaaaatgaagaagatcttgac 6946245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 294 - 384
Target Start/End: Complemental strand, 15722328 - 15722239
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 384  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 15722239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 343  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 23459844 - 23459917
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 23459917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1116 - 1149
Target Start/End: Complemental strand, 42756292 - 42756259
Alignment:
Q  1116 tttggtcaagtaacataatggctagagctcacac 1149  Q
    ||||||||||||||||||||||||||||||||||    
T  42756292 tttggtcaagtaacataatggctagagctcacac 42756259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 35315620 - 35315521
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 369  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 1260314 - 1260271
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  1260314 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 1260271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 1309066 - 1309109
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  1309066 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 1309109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 6331691 - 6331648
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  6331691 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 6331648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 11050697 - 11050740
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||||| || |||||||||||||||||||||||    
T  11050697 tttttttgtcaagtaacctagtggctagagctcacacaatttaa 11050740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 11190058 - 11190015
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||    
T  11190058 tttttgggtcaagtagcctaatggctagagctcacacaatttaa 11190015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 17499079 - 17499036
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  17499079 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 17499036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 18694915 - 18694872
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  18694915 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 18694872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 19281738 - 19281695
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  19281738 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 19281695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 36005572 - 36005529
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  36005572 ttttttggtcaagtagcctattggctagagctcacacaatttaa 36005529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 38400444 - 38400401
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  38400444 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 38400401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 39408630 - 39408673
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||    
T  39408630 tttttcggtcaagtagcatagtggctagagctcacacaatttaa 39408673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 41509646 - 41509603
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  41509646 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 41509603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 4603114 - 4603180
Alignment:
Q  319 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||| | | |||| |||||| || |||||||||  |||||||||| |||||||||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaatta 4603180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  271 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 320  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1107 - 1156
Target Start/End: Original strand, 38557157 - 38557206
Alignment:
Q  1107 agtttcttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||| ||||| |||||||||   ||||||||||||||||||||||||||    
T  38557157 agtttttttttcggtcaagtagtctaatggctagagctcacacaatttaa 38557206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 271 - 385
Target Start/End: Complemental strand, 42761831 - 42761717
Alignment:
Q  271 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 370  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  371 cactatcattaatta 385  Q
    ||  |||||||||||    
T  42761731 catcatcattaatta 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 21360400 - 21360280
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 363  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  364 tgggtcccactatcattaatta 385  Q
    |||  ||||| || ||||||||    
T  21360301 tggaccccaccattattaatta 21360280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 30426671 - 30426740
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 30426740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 28069831 - 28069723
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  377 cattaatta 385  Q
    |||||||||    
T  28069731 cattaatta 28069723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 36991468 - 36991360
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  377 cattaatta 385  Q
    |||||||||    
T  36991368 cattaatta 36991360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 18689585 - 18689495
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 24557162 - 24557252
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  |||||||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 26749546 - 26749619
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 26749619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 275 - 385
Target Start/End: Original strand, 42338008 - 42338117
Alignment:
Q  275 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 374  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  375 atcattaatta 385  Q
    |||||||||||    
T  42338107 atcattaatta 42338117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 6014307 - 6014198
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 375  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  376 tcattaatta 385  Q
    ||||||||||    
T  6014207 tcattaatta 6014198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 36748492 - 36748562
Alignment:
Q  314 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcattaatta 36748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 10672519 - 10672583
Alignment:
Q  321 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaatta 10672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 17520459 - 17520403
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| |||||||||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggt 17520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 13406730 - 13406687
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| |||| |||||||||||||||||||||||    
T  13406730 ttttttggtcaagtagcatagtggctagagctcacacaatttaa 13406687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 385
Target Start/End: Original strand, 10652571 - 10652688
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 367  Q
    |||||| | |||||||| |||||| ||||||||||||   |   ||| ||||||||||||||| ||| ||||| |||  |||||| ||| | ||| ||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattggg 10652670  T
Q  368 tcccactatcattaatta 385  Q
    |||||| |||||||||||    
T  10652671 tcccaccatcattaatta 10652688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 40695249 - 40695314
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| |||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcatta 40695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 34612640 - 34612568
Alignment:
Q  313 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaatta 34612568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 45113390 - 45113274
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 368  Q
    |||||| |||||||| |||||| |||||||||| |   |   ||||||||||||| ||||||||| || |||||||  ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  369 cccactatcattaatta 385  Q
    ||||  |||||||||||    
T  45113290 cccatcatcattaatta 45113274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 257669 - 257626
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  257669 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 658251 - 658294
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  658251 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 658294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 843987 - 844030
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  843987 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 844030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 2787021 - 2787064
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  2787021 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 2787064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 10568215 - 10568172
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  10568215 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 10568172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 17698652 - 17698609
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  17698652 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 17698609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 18926075 - 18926118
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  18926075 ttttttggtcaagtagtctaatggctagagctcacacaatttaa 18926118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 28909595 - 28909552
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  28909595 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 28909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 33473295 - 33473338
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  33473295 ttttttgctcaagtaacctagtggctagagctcacacaatttaa 33473338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 37717493 - 37717450
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  37717493 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 37717450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 37966397 - 37966487
Alignment:
Q  267 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacca 358  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | ||||||||||    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctacca 37966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 38219508 - 38219551
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  38219508 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 38219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 39587677 - 39587634
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  39587677 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 39587634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 43186983 - 43186940
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  43186983 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 43186940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1114 - 1156
Target Start/End: Original strand, 1632381 - 1632423
Alignment:
Q  1114 tttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  1632381 tttttggtcaagtaacctagtggttagagctcacacaatttaa 1632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  266 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 332  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 24102085 - 24102020
Alignment:
Q  320 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||| | |||||||||  ||| |||||||| |||||| || |||| |||||||||||    
T  24102085 agagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaatta 24102020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 28318924 - 28318973
Alignment:
Q  336 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||||||||    
T  28318924 aaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaatta 28318973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 41511335 - 41511266
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||| ||||||||| | | |||||||||| ||||||||| || ||||||| | |||| |||||||||||    
T  41511335 ttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaatta 41511266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 44859189 - 44859238
Alignment:
Q  336 aaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||  ||||| |||||| |||||||||||||| |||||||||||    
T  44859189 aaaatagatggtgggttctaccactaagtgggtcccaccatcattaatta 44859238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 924 - 1026
Target Start/End: Complemental strand, 46115242 - 46115140
Alignment:
Q  924 cctctataaaataaggaatggtcaaaataaagatcatataatcacagtgaaaaatgttgaactagtatcaatagccaagagcaaagataaacattgaagc 1023  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||  |||||||||||| |||||||||| |||||    
T  46115242 cctctataaaataaggaatgttcaaaataaagatcatacaatcacagtgaaaaatgttgaatcagtatctgtagccaagagcagagataaacatggaagc 46115143  T
Q  1024 ata 1026  Q
    |||    
T  46115142 ata 46115140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 716 - 917
Target Start/End: Complemental strand, 46115506 - 46115291
Alignment:
Q  716 atttgtatttttcttagaaatttatagaaaaacaaaactatttacttcacaccattcactgccatgtttaagaccggcaacaaaaatttcttagaacgac 815  Q
    |||| ||||||||||||||||||| ||||||  | |||||||||  |||||  ||| ||| |||| ||||||| | |||||| ||||| |||||| |||     
T  46115506 atttttatttttcttagaaatttagagaaaaggagaactatttaaatcacattattaacttccatatttaagatcagcaacagaaattccttagagcgag 46115407  T
Q  816 agtttcaaactctaaagatactgaaagtgcacc-----aagaagtatgccaag---------ccaacatatgagggaacaatcaaatgaaattcaagagc 901  Q
    ||||||||| |||| || ||||||||||||| |     |||||||||||||||         ||||||||| || |||||||||||||||||||||||||    
T  46115406 agtttcaaaatctatagttactgaaagtgcatcaagaaaagaagtatgccaagccaacatccccaacatattagagaacaatcaaatgaaattcaagagc 46115307  T
Q  902 aaataaattatgacat 917  Q
    || |||||||||||||    
T  46115306 aagtaaattatgacat 46115291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 4888579 - 4888471
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  377 cattaatta 385  Q
    |||||||||    
T  4888479 cattaatta 4888471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 359  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 25084730 - 25084799
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 25084799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 272 - 385
Target Start/End: Original strand, 40023215 - 40023327
Alignment:
Q  272 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 371  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  372 actatcattaatta 385  Q
    || | |||||||||    
T  40023314 accaccattaatta 40023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 9559017 - 9559125
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  377 cattaatta 385  Q
    |||||||||    
T  9559117 cattaatta 9559125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 39855770 - 39855884
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 369  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  370 ccactatcattaatta 385  Q
    |||  |||||||||||    
T  39855869 ccatcatcattaatta 39855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 12139400 - 12139330
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaatta 12139330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 32916033 - 32915960
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||| |||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaatta 32915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 33450627 - 33450510
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 367  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  368 tcccactatcattaatta 385  Q
    |||||  |||||||||||    
T  33450527 tcccatcatcattaatta 33450510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 47799898 - 47799971
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaatta 47799971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 7712331 - 7712438
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| |||| ||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccat 7712429  T
Q  377 cattaatta 385  Q
    | |||||||    
T  7712430 ctttaatta 7712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  308 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 364  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 385
Target Start/End: Complemental strand, 989239 - 989133
Alignment:
Q  278 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 377  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| ||||| || ||     
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  378 attaatta 385  Q
    ||||||||    
T  989140 attaatta 989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 270 - 384
Target Start/End: Complemental strand, 7373985 - 7373872
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 369  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  370 ccactatcattaatt 384  Q
    |||||||||||||||    
T  7373886 ccactatcattaatt 7373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 7362676 - 7362572
Alignment:
Q  281 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 380  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  381 aatta 385  Q
    |||||    
T  7362576 aatta 7362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 16366630 - 16366522
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  377 cattaatta 385  Q
    |||||||||    
T  16366530 cattaatta 16366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 21151264 - 21151156
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  377 cattaatta 385  Q
    |||||||||    
T  21151164 cattaatta 21151156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 385
Target Start/End: Original strand, 47500236 - 47500354
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 366  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  367 gtcccactatcattaatta 385  Q
    ||||||  |||||||||||    
T  47500336 gtcccatcatcattaatta 47500354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 8149686 - 8149613
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaatta 8149613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 45260429 - 45260498
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaatta 45260498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 385
Target Start/End: Complemental strand, 29631156 - 29631052
Alignment:
Q  278 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 377  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  378 attaatta 385  Q
    ||||||||    
T  29631059 attaatta 29631052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 369
Target Start/End: Complemental strand, 44648076 - 44647984
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 369  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||||    
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtc 44647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 24193668 - 24193597
Alignment:
Q  314 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||  |||| ||||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaatta 24193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 41699769 - 41699726
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  41699769 ttttttggtcaagcaacatagtggctagagctcacacaatttaa 41699726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 47999910 - 47999867
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  47999910 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 47999867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 18198377 - 18198260
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 367  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  368 tcccactatcattaatta 385  Q
    |||||| |||||||||||    
T  18198277 tcccaccatcattaatta 18198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 30588612 - 30588539
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaatta 30588539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 345  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 2229105 - 2229062
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  2229105 ttttttggtcaagtagtctaatggctagagctcacacaatttaa 2229062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 3062904 - 3062861
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  3062904 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 3062861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 7525574 - 7525531
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||||| || |||||||||||||||||||||||    
T  7525574 tttttttgtcaagtaacctagtggctagagctcacacaatttaa 7525531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 10244829 - 10244872
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  10244829 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 10244872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 12640529 - 12640572
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  12640529 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 12640572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  311 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  311 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 24781160 - 24781117
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  24781160 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 24781117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 24880392 - 24880435
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  24880392 ttttttggtcaagtagcctattggctagagctcacacaatttaa 24880435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 26801669 - 26801712
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  26801669 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 26801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 27510197 - 27510240
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  27510197 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 27510240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 29617535 - 29617492
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  29617535 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 29617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 32676882 - 32676925
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  32676882 ttttttggtcaagtagcttagtggctagagctcacacaatttaa 32676925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 35645729 - 35645686
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  35645729 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 35645686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 35950258 - 35950215
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  35950258 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 35950215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 38365761 - 38365659
Alignment:
Q  282 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    |||||||||  ||||||||||| || |||  |||||| || |||||||| ||| ||||| ||||||||||| ||| ||||| ||| | | ||||||||||    
T  38365761 tcttcattttttaaaataaatgtaa-tacgtaatttgaagtgagatagatacaaaaaattgataatgggtcttactattaaatggattctactatcatta 38365663  T
Q  382 atta 385  Q
    ||||    
T  38365662 atta 38365659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 43119372 - 43119415
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  43119372 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 43119415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 46802331 - 46802390
Alignment:
Q  314 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| ||||||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccac 46802390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  266 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 332  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1112 - 1153
Target Start/End: Original strand, 9697830 - 9697871
Alignment:
Q  1112 cttttttggtcaagtaacataatggctagagctcacacaatt 1153  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  9697830 cttttttggtcaagtagcctagtggctagagctcacacaatt 9697871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  299 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 356  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 47226039 - 47226145
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| ||||||  |  ||||||| |||| ||| |||||||||| ||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaata--tggtgggtcccaccactaaatgggtcccaccat 47226136  T
Q  377 cattaatta 385  Q
    |||||||||    
T  47226137 cattaatta 47226145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 5e-28; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 29341106 - 29340999
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  377 cattaatta 385  Q
    |||||||||    
T  29341007 cattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 35660572 - 35660680
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  377 cattaatta 385  Q
    |||||||||    
T  35660672 cattaatta 35660680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 278 - 385
Target Start/End: Original strand, 4895699 - 4895806
Alignment:
Q  278 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 377  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  378 attaatta 385  Q
    ||||||||    
T  4895799 attaatta 4895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 11775905 - 11775797
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||  |    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgt 11775806  T
Q  377 cattaatta 385  Q
    |||||||||    
T  11775805 cattaatta 11775797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 18625384 - 18625492
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  377 cattaatta 385  Q
    |||||||||    
T  18625484 cattaatta 18625492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 32129580 - 32129688
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  377 cattaatta 385  Q
    |||||||||    
T  32129680 cattaatta 32129688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 37266843 - 37266735
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  377 cattaatta 385  Q
    |||||||||    
T  37266743 cattaatta 37266735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 43309220 - 43309113
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  377 cattaatt 384  Q
    ||||||||    
T  43309120 cattaatt 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 14349876 - 14349807
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 14349807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 31653112 - 31653039
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| |||||||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 40753164 - 40753233
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaatta 40753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 13032230 - 13032122
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  377 cattaatta 385  Q
    |||||||||    
T  13032130 cattaatta 13032122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 34827287 - 34827196
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| |||||||||||||| ||| |||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaatta 34827196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 385
Target Start/End: Complemental strand, 39902525 - 39902419
Alignment:
Q  279 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 378  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  379 ttaatta 385  Q
    |||||||    
T  39902425 ttaatta 39902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 10362012 - 10362085
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||| ||||||||||||| ||||||||| | || ||| ||||||||||||||||||| |||  ||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaatta 10362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 36290679 - 36290606
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaatta 36290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 2984389 - 2984461
Alignment:
Q  313 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaatta 2984461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 24033207 - 24033164
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  24033207 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 24033164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  275 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 341  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 27428879 - 27428949
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaa 382  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| ||||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 3057152 - 3057225
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||| ||||||| ||||| |||||||||  ||| ||||||||||||||| ||| ||  |||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaatta 3057225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  320 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 381  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 18653438 - 18653385
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 365  Q
    ||||||| ||||||||||||||| |||||||||| || || |||||||||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtg 18653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1105 - 1153
Target Start/End: Complemental strand, 28308372 - 28308324
Alignment:
Q  1105 atagtttcttttttggtcaagtaacataatggctagagctcacacaatt 1153  Q
    ||||||| ||||||||||||||| | || ||||||||||||||||||||    
T  28308372 atagttttttttttggtcaagtagcctagtggctagagctcacacaatt 28308324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 31279990 - 31279918
Alignment:
Q  313 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcctaccataattaatta 31279918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 2301511 - 2301554
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  2301511 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 2301554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 4745816 - 4745859
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  4745816 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 4745859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 6518716 - 6518759
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||||| || |||||||||||||||||||||||    
T  6518716 tttttttgtcaagtaacctagtggctagagctcacacaatttaa 6518759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 8968879 - 8968836
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  8968879 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 8968836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 11795623 - 11795580
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  11795623 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 11795580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 12463886 - 12463843
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  12463886 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 12463843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 25400307 - 25400350
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  25400307 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 25400350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 27765387 - 27765344
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  27765387 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 27765344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 30641618 - 30641575
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  30641618 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 30641575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 32505818 - 32505775
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | | ||||||||||||||||||||||||    
T  32505818 ttttttggtcaagtagcctgatggctagagctcacacaatttaa 32505775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 42320447 - 42320404
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||||| || |||||||||||||||||||||||    
T  42320447 tttttttgtcaagtaacctagtggctagagctcacacaatttaa 42320404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 43222193 - 43222130
Alignment:
Q  322 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||| |||||||||  |||||| || |||||| ||| |||||| |||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaatta 43222130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1114 - 1156
Target Start/End: Complemental strand, 2848342 - 2848300
Alignment:
Q  1114 tttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||||||||||| | || |||||||||||||||||||||||    
T  2848342 tttttggtcaagtagcctagtggctagagctcacacaatttaa 2848300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 4592858 - 4592804
Alignment:
Q  331 cacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||| |||||||||  |||||| ||||| |||||||||||||| |||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaatta 4592804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  270 gggttaggatcctcttcatttgataaaataaatgg 304  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 31546563 - 31546490
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||  || ||||||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatcataattaatta 31546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 41660183 - 41660110
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  ||||||  | || || ||||||||||| |||||||||||    
T  41660183 caatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaatta 41660110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 19901881 - 19901989
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  377 cattaatta 385  Q
    |||||||||    
T  19901981 cattaatta 19901989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 277 - 382
Target Start/End: Complemental strand, 23610754 - 23610649
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  377 cattaa 382  Q
    ||||||    
T  23610654 cattaa 23610649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 5416429 - 5416536
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  377 cattaatta 385  Q
    |||||||||    
T  5416528 cattaatta 5416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 36532741 - 36532641
Alignment:
Q  272 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 371  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  372 ac 373  Q
    ||    
T  36532642 ac 36532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 56558400 - 56558283
Alignment:
Q  268 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 367  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  368 tcccactatcattaatta 385  Q
    |||||| |||||||||||    
T  56558300 tcccaccatcattaatta 56558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 273 - 385
Target Start/End: Complemental strand, 1871392 - 1871281
Alignment:
Q  273 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 372  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  373 ctatcattaatta 385  Q
      |||||||||||    
T  1871293 tcatcattaatta 1871281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 56453777 - 56453891
Alignment:
Q  270 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  369 cccactatcattaatta 385  Q
    ||||| |||||| ||||    
T  56453875 cccaccatcattcatta 56453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 15178628 - 15178699
Alignment:
Q  269 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 340  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 5763159 - 5763233
Alignment:
Q  311 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaatta 5763233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 56269074 - 56269147
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaatta 56269147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 3952133 - 3952241
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  377 cattaatta 385  Q
    |||||||||    
T  3952233 cattaatta 3952241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 34778533 - 34778425
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  377 cattaatta 385  Q
    |||||||||    
T  34778433 cattaatta 34778425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 5815267 - 5815350
Alignment:
Q  278 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 364  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagt 5815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 42844148 - 42844258
Alignment:
Q  274 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 373  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  374 tatcattaatta 385  Q
     |||||||||||    
T  42844247 catcattaatta 42844258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 23474188 - 23474115
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| |||||||||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaatta 23474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 24073689 - 24073620
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaatta 24073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 48914516 - 48914589
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || |||||||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaatta 48914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 18207003 - 18207111
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  377 cattaatta 385  Q
    |||||||||    
T  18207103 cattaatta 18207111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 5524524 - 5524451
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaatta 5524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 275 - 385
Target Start/End: Complemental strand, 13493387 - 13493276
Alignment:
Q  275 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 372  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  373 ctatcattaatta 385  Q
     ||||||||||||    
T  13493288 ttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 30567970 - 30567905
Alignment:
Q  320 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaatta 30567905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  275 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 340  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 36688186 - 36688259
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| |||||||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaatta 36688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 272 - 372
Target Start/End: Original strand, 47922324 - 47922425
Alignment:
Q  272 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 370  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  371 ca 372  Q
    ||    
T  47922424 ca 47922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 50483554 - 50483627
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaatta 50483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 33247093 - 33247201
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  377 cattaatta 385  Q
    |||||||||    
T  33247193 cattaatta 33247201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 39862629 - 39862521
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  377 cattaatta 385  Q
    |||||||||    
T  39862529 cattaatta 39862521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 7686202 - 7686245
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  7686202 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 7686245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 33262557 - 33262623
Alignment:
Q  319 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaatta 33262623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 1015852 - 1015925
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaatta 1015925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 12312438 - 12312547
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 375  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  376 tcattaatta 385  Q
    ||||||||||    
T  12312538 tcattaatta 12312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 46804671 - 46804635
Alignment:
Q  349 ggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaatta 46804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 3035995 - 3036038
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  3035995 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 3036038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 3904473 - 3904430
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| |||| |||||||||||||||||||||||    
T  3904473 tttttttgtcaagtagcatagtggctagagctcacacaatttaa 3904430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 6371244 - 6371201
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  6371244 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 6371201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 8433563 - 8433606
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||    
T  8433563 tttttttgtcaagtaagatagtggctagagctcacacaatttaa 8433606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 10141113 - 10141070
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  10141113 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 10141070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 12167557 - 12167600
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||||| |||||||||||||||||||| |||||    
T  12167557 tttttttgtcaagtaacctaatggctagagctcacacattttaa 12167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 21380118 - 21380161
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  21380118 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 21380161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 35948123 - 35948166
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  35948123 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 35948166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 40994043 - 40994086
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  40994043 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 40994086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 43147324 - 43147367
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  43147324 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 43147367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 43597025 - 43596982
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  43597025 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 43596982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 46105665 - 46105622
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||    
T  46105665 ttttttggtcaagtagcctaatggctatagctcacacaatttaa 46105622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 46774970 - 46775013
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  46774970 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 46775013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 48950914 - 48950871
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  48950914 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 48950871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 49901612 - 49901569
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  49901612 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 49901569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 53634191 - 53634234
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  53634191 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 53634234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 12241441 - 12241479
Alignment:
Q  347 tgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaatta 12241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 38079725 - 38079791
Alignment:
Q  319 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||  ||||||||  |||||||||| | ||||||| | |||| |||||||||||    
T  38079725 gagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaatta 38079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  311 acaatttggagagagatagacacataaaatagataatg 348  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1112 - 1153
Target Start/End: Original strand, 13564207 - 13564248
Alignment:
Q  1112 cttttttggtcaagtaacataatggctagagctcacacaatt 1153  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  13564207 cttttttggtcaagtagcctagtggctagagctcacacaatt 13564248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 368
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  283 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 368  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 37002249 - 37002322
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||| ||||||||||||| ||||||  |  ||| |||||  | |||||||||||||| |||||||||||    
T  37002249 caatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaatta 37002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 42010194 - 42010121
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| ||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||    
T  42010194 caatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaatta 42010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1115 - 1156
Target Start/End: Complemental strand, 54015859 - 54015818
Alignment:
Q  1115 ttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||| | || |||||||||||||||||||||||    
T  54015859 ttttggtcaagtagcctagtggctagagctcacacaatttaa 54015818  T

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Target: scaffold0062 (Bit Score: 48; Significance: 8e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 58774 - 58684
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

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Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 294 - 384
Target Start/End: Complemental strand, 70885 - 70796
Alignment:
Q  294 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatt 384  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaatt 70796  T

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Target: scaffold0250 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 7220 - 7151
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaatta 7151  T

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Target: scaffold0121 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 29567 - 29640
Alignment:
Q  312 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaatta 29640  T

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Target: scaffold0012 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 208175 - 208067
Alignment:
Q  277 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 376  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  377 cattaatta 385  Q
    |||||||||    
T  208075 cattaatta 208067  T

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Target: scaffold0035 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 16399 - 16468
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaatta 16468  T

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Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 9203 - 9272
Alignment:
Q  316 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| |||||||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaatta 9272  T

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Target: scaffold0187 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 11060 - 11103
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  11060 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 11103  T

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Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 21388 - 21431
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  21388 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 21431  T

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Target: scaffold0117 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 18419 - 18462
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  18419 ttttttggtcaagtagcctaatggctagagctcacacaatttaa 18462  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 17311 - 17377
Alignment:
Q  319 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaatta 17377  T

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Target: scaffold1185 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 2333 - 2376
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  2333 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 2376  T

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Target: scaffold0275 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 8950 - 8907
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  8950 tttttttgtcaagtagcctaatggctagagctcacacaatttaa 8907  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 17750 - 17707
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  17750 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 17707  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 22450 - 22513
Alignment:
Q  322 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaatta 385  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||| || |||| || ||||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaatta 22513  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 10766 - 10809
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  10766 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 10809  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Complemental strand, 112238 - 112195
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  112238 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 112195  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 12201 - 12244
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  12201 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 12244  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1156
Target Start/End: Original strand, 266645 - 266688
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaatttaa 1156  Q
    ||||||||||||||| | || |||||||||||||||||||||||    
T  266645 ttttttggtcaagtagcctagtggctagagctcacacaatttaa 266688  T

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Target: scaffold1213 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1113 - 1154
Target Start/End: Complemental strand, 634 - 593
Alignment:
Q  1113 ttttttggtcaagtaacataatggctagagctcacacaattt 1154  Q
    ||||||||||||||| | || |||||||||||||||||||||    
T  634 ttttttggtcaagtagcctagtggctagagctcacacaattt 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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