View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8981_low_223 (Length: 296)

Name: NF8981_low_223
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8981_low_223
NF8981_low_223
[»] chr1 (68 HSPs)
chr1 (18-289)||(27896751-27897014)
chr1 (126-296)||(39864007-39864177)
chr1 (215-296)||(9307612-9307693)
chr1 (154-296)||(20209892-20210034)
chr1 (220-296)||(8896384-8896460)
chr1 (216-296)||(22856289-22856369)
chr1 (216-296)||(35367788-35367868)
chr1 (215-280)||(24991721-24991786)
chr1 (215-289)||(6785241-6785315)
chr1 (219-296)||(917013-917090)
chr1 (219-296)||(7759204-7759281)
chr1 (223-296)||(15699115-15699188)
chr1 (219-296)||(30754993-30755070)
chr1 (120-289)||(38787228-38787400)
chr1 (215-296)||(44707812-44707893)
chr1 (223-296)||(49224038-49224111)
chr1 (219-296)||(52429333-52429410)
chr1 (119-296)||(16395099-16395274)
chr1 (219-295)||(37276450-37276526)
chr1 (222-296)||(25089137-25089212)
chr1 (168-296)||(40144899-40145027)
chr1 (133-296)||(31042700-31042863)
chr1 (215-277)||(37539112-37539174)
chr1 (215-296)||(14757646-14757727)
chr1 (219-296)||(26093383-26093460)
chr1 (215-296)||(28748976-28749057)
chr1 (154-296)||(33733314-33733456)
chr1 (219-296)||(44761583-44761660)
chr1 (215-295)||(6023702-6023782)
chr1 (215-279)||(27721517-27721581)
chr1 (163-296)||(37506057-37506190)
chr1 (126-261)||(35682881-35683012)
chr1 (215-281)||(12039067-12039133)
chr1 (219-280)||(2572458-2572519)
chr1 (219-280)||(10495828-10495889)
chr1 (219-296)||(13579673-13579750)
chr1 (219-296)||(36701910-36701987)
chr1 (219-296)||(36718014-36718091)
chr1 (219-295)||(4441656-4441732)
chr1 (216-287)||(39887821-39887892)
chr1 (219-296)||(9379220-9379298)
chr1 (219-293)||(52837269-52837343)
chr1 (119-269)||(4659666-4659815)
chr1 (219-296)||(6160511-6160588)
chr1 (219-296)||(7351625-7351702)
chr1 (219-280)||(11449875-11449935)
chr1 (215-296)||(23169045-23169126)
chr1 (215-296)||(29778448-29778529)
chr1 (216-280)||(37177822-37177886)
chr1 (219-294)||(31978706-31978781)
chr1 (111-296)||(34031579-34031768)
chr1 (230-296)||(15904751-15904817)
chr1 (231-296)||(24880874-24880942)
chr1 (215-277)||(26256159-26256221)
chr1 (218-296)||(26257992-26258070)
chr1 (219-280)||(2137437-2137498)
chr1 (229-282)||(3260590-3260643)
chr1 (220-296)||(32219713-32219790)
chr1 (227-296)||(42409991-42410060)
chr1 (216-268)||(24500058-24500110)
chr1 (216-288)||(41080586-41080656)
chr1 (229-296)||(9412855-9412922)
chr1 (223-261)||(32826081-32826119)
chr1 (254-296)||(41121877-41121919)
chr1 (123-189)||(43500899-43500965)
chr1 (231-296)||(45331339-45331407)
chr1 (124-191)||(26258098-26258163)
chr1 (232-296)||(32970619-32970683)
[»] chr7 (58 HSPs)
chr7 (119-296)||(759147-759324)
chr7 (119-296)||(11373484-11373661)
chr7 (119-296)||(28202365-28202542)
chr7 (215-296)||(22738693-22738774)
chr7 (119-296)||(34947395-34947573)
chr7 (215-296)||(21350681-21350762)
chr7 (119-296)||(25571316-25571492)
chr7 (215-296)||(24516345-24516426)
chr7 (215-296)||(46478349-46478430)
chr7 (119-294)||(48608763-48608937)
chr7 (219-296)||(21390291-21390368)
chr7 (216-296)||(2459464-2459544)
chr7 (216-296)||(7463206-7463286)
chr7 (216-296)||(34100603-34100683)
chr7 (222-296)||(3178260-3178334)
chr7 (119-296)||(83280-83458)
chr7 (215-296)||(26974018-26974099)
chr7 (119-293)||(32346111-32346285)
chr7 (219-296)||(41506121-41506198)
chr7 (154-296)||(43873854-43873996)
chr7 (123-296)||(21760040-21760213)
chr7 (124-296)||(37245592-37245763)
chr7 (219-296)||(9785984-9786061)
chr7 (229-290)||(13961965-13962026)
chr7 (215-296)||(28103725-28103806)
chr7 (219-296)||(30865963-30866040)
chr7 (219-292)||(36790736-36790809)
chr7 (119-296)||(6494990-6495166)
chr7 (112-296)||(38391641-38391821)
chr7 (219-279)||(49101659-49101719)
chr7 (219-280)||(19271805-19271866)
chr7 (119-296)||(23670381-23670559)
chr7 (215-296)||(32018768-32018849)
chr7 (215-296)||(32018972-32019053)
chr7 (217-296)||(8592496-8592575)
chr7 (119-263)||(40076214-40076358)
chr7 (215-280)||(5524369-5524437)
chr7 (243-296)||(16560626-16560679)
chr7 (243-296)||(16604983-16605036)
chr7 (215-296)||(29835470-29835550)
chr7 (231-296)||(35333051-35333116)
chr7 (229-290)||(31930559-31930622)
chr7 (217-296)||(17610896-17610975)
chr7 (229-296)||(31665773-31665840)
chr7 (223-282)||(44424144-44424203)
chr7 (215-282)||(47045541-47045608)
chr7 (216-281)||(33819207-33819272)
chr7 (215-255)||(16904371-16904411)
chr7 (216-296)||(24166984-24167064)
chr7 (222-294)||(30546413-30546485)
chr7 (229-296)||(42796011-42796081)
chr7 (229-296)||(42935664-42935734)
chr7 (114-157)||(26973918-26973961)
chr7 (119-191)||(31930663-31930737)
chr7 (219-281)||(17828422-17828483)
chr7 (119-189)||(21390190-21390260)
chr7 (215-296)||(7457477-7457558)
chr7 (229-281)||(27920994-27921046)
[»] chr8 (49 HSPs)
chr8 (124-296)||(17719308-17719480)
chr8 (218-296)||(11976986-11977064)
chr8 (119-296)||(44761544-44761719)
chr8 (113-296)||(26626162-26626345)
chr8 (122-296)||(39405654-39405828)
chr8 (123-296)||(39482505-39482681)
chr8 (219-296)||(31082608-31082685)
chr8 (232-296)||(21216151-21216215)
chr8 (229-296)||(32678402-32678469)
chr8 (125-296)||(32476183-32476353)
chr8 (113-280)||(34948753-34948918)
chr8 (215-296)||(9300163-9300244)
chr8 (222-295)||(27294110-27294183)
chr8 (215-296)||(45425716-45425797)
chr8 (216-296)||(4924117-4924197)
chr8 (217-296)||(43719286-43719365)
chr8 (215-296)||(4428401-4428482)
chr8 (215-296)||(7172899-7172980)
chr8 (227-296)||(10098041-10098110)
chr8 (219-296)||(10179997-10180074)
chr8 (219-280)||(13335205-13335266)
chr8 (215-295)||(17823906-17823986)
chr8 (220-296)||(42886990-42887066)
chr8 (222-293)||(31271013-31271084)
chr8 (219-281)||(29226593-29226655)
chr8 (119-282)||(39301020-39301183)
chr8 (219-296)||(22771885-22771962)
chr8 (223-296)||(31231723-31231796)
chr8 (216-296)||(1739529-1739609)
chr8 (216-292)||(36006941-36007017)
chr8 (229-296)||(40996415-40996482)
chr8 (219-296)||(396661-396738)
chr8 (219-296)||(5053203-5053280)
chr8 (215-280)||(14855000-14855065)
chr8 (145-246)||(50731-50832)
chr8 (113-189)||(40996518-40996594)
chr8 (219-296)||(10953788-10953862)
chr8 (219-296)||(10961793-10961867)
chr8 (241-296)||(31331419-31331474)
chr8 (233-296)||(34057668-34057731)
chr8 (216-290)||(35504927-35505001)
chr8 (219-296)||(35732110-35732187)
chr8 (216-296)||(39466087-39466168)
chr8 (232-295)||(42972559-42972625)
chr8 (222-296)||(27870856-27870931)
chr8 (215-269)||(21649438-21649492)
chr8 (232-280)||(5356602-5356650)
chr8 (260-296)||(7672391-7672427)
chr8 (216-296)||(41091981-41092060)
[»] chr5 (44 HSPs)
chr5 (119-296)||(40899807-40899984)
chr5 (119-296)||(6315824-6316001)
chr5 (119-296)||(6753705-6753882)
chr5 (119-296)||(1248651-1248828)
chr5 (119-296)||(27542684-27542861)
chr5 (217-296)||(4441008-4441087)
chr5 (137-296)||(8698215-8698375)
chr5 (133-296)||(19929849-19930012)
chr5 (219-296)||(21060619-21060696)
chr5 (215-296)||(31655038-31655119)
chr5 (215-296)||(40530271-40530352)
chr5 (215-296)||(41496065-41496146)
chr5 (222-296)||(6754021-6754095)
chr5 (215-296)||(4818536-4818617)
chr5 (219-296)||(7827973-7828050)
chr5 (219-296)||(27580589-27580666)
chr5 (215-296)||(6615927-6616007)
chr5 (216-296)||(22848431-22848511)
chr5 (216-296)||(29374328-29374408)
chr5 (240-296)||(38161459-38161515)
chr5 (217-267)||(2232145-2232195)
chr5 (121-296)||(15818529-15818703)
chr5 (216-258)||(41480137-41480179)
chr5 (219-296)||(8725056-8725133)
chr5 (215-296)||(11796214-11796295)
chr5 (217-258)||(41478772-41478813)
chr5 (219-296)||(42803667-42803744)
chr5 (216-280)||(29570378-29570442)
chr5 (218-296)||(41478815-41478893)
chr5 (219-296)||(37184126-37184203)
chr5 (223-296)||(41062207-41062280)
chr5 (119-293)||(2588111-2588287)
chr5 (218-258)||(41492248-41492288)
chr5 (215-269)||(39325847-39325902)
chr5 (218-296)||(41492290-41492368)
chr5 (215-269)||(9515721-9515775)
chr5 (215-260)||(32439857-32439902)
chr5 (219-274)||(37101274-37101329)
chr5 (120-191)||(41492149-41492219)
chr5 (120-190)||(41478596-41478666)
chr5 (221-269)||(10598214-10598262)
chr5 (228-296)||(18841477-18841545)
chr5 (223-279)||(26285542-26285598)
chr5 (239-291)||(29856056-29856108)
[»] chr4 (65 HSPs)
chr4 (119-296)||(49428397-49428573)
chr4 (123-296)||(5841482-5841657)
chr4 (113-296)||(38405157-38405341)
chr4 (215-296)||(17237351-17237432)
chr4 (119-296)||(21240759-21240932)
chr4 (119-296)||(47773074-47773251)
chr4 (219-296)||(22130032-22130109)
chr4 (215-296)||(49175989-49176070)
chr4 (123-296)||(6643715-6643887)
chr4 (219-296)||(33790786-33790863)
chr4 (215-296)||(36985771-36985852)
chr4 (215-296)||(47464420-47464501)
chr4 (216-296)||(16821386-16821466)
chr4 (119-281)||(35311293-35311456)
chr4 (220-296)||(52247483-52247559)
chr4 (154-296)||(11907654-11907796)
chr4 (219-296)||(30682251-30682328)
chr4 (215-296)||(34360640-34360721)
chr4 (219-296)||(35380388-35380465)
chr4 (219-296)||(49746950-49747027)
chr4 (216-296)||(7061719-7061799)
chr4 (123-296)||(26147670-26147846)
chr4 (216-296)||(43237229-43237309)
chr4 (216-296)||(53412094-53412174)
chr4 (229-296)||(18741529-18741596)
chr4 (215-281)||(32884786-32884852)
chr4 (234-296)||(52859854-52859916)
chr4 (219-296)||(461947-462024)
chr4 (219-296)||(2066778-2066855)
chr4 (223-296)||(17114433-17114506)
chr4 (215-280)||(51624771-51624836)
chr4 (228-296)||(11288685-11288752)
chr4 (229-293)||(25142437-25142501)
chr4 (216-296)||(35998798-35998877)
chr4 (119-296)||(42616958-42617134)
chr4 (168-296)||(2653358-2653486)
chr4 (217-296)||(53346746-53346825)
chr4 (215-296)||(2942700-2942780)
chr4 (219-296)||(19265797-19265874)
chr4 (215-296)||(44536251-44536331)
chr4 (219-296)||(50264135-50264212)
chr4 (216-296)||(43902237-43902317)
chr4 (228-296)||(44526377-44526445)
chr4 (218-293)||(7986962-7987037)
chr4 (219-278)||(31370373-31370432)
chr4 (229-296)||(54506787-54506854)
chr4 (219-296)||(6609750-6609827)
chr4 (215-296)||(38663502-38663583)
chr4 (219-296)||(39397333-39397410)
chr4 (215-296)||(40122909-40122990)
chr4 (221-293)||(48914206-48914278)
chr4 (219-296)||(3689551-3689628)
chr4 (215-280)||(47359020-47359085)
chr4 (227-279)||(25233178-25233230)
chr4 (219-296)||(28500946-28501015)
chr4 (229-281)||(30261003-30261055)
chr4 (123-190)||(41711618-41711685)
chr4 (220-258)||(10672643-10672681)
chr4 (220-258)||(10886283-10886321)
chr4 (219-296)||(42517693-42517773)
chr4 (219-252)||(27880330-27880363)
chr4 (230-275)||(43967611-43967656)
chr4 (252-296)||(30192227-30192271)
chr4 (219-267)||(35251888-35251936)
chr4 (219-259)||(46396963-46397003)
[»] chr2 (54 HSPs)
chr2 (119-296)||(14523419-14523596)
chr2 (125-296)||(17695222-17695396)
chr2 (133-281)||(36354505-36354652)
chr2 (219-296)||(8947099-8947176)
chr2 (216-296)||(35242344-35242424)
chr2 (215-296)||(5789695-5789776)
chr2 (219-296)||(37322417-37322494)
chr2 (119-280)||(3323335-3323496)
chr2 (122-282)||(35313779-35313939)
chr2 (223-296)||(15359134-15359207)
chr2 (219-296)||(39691479-39691556)
chr2 (231-296)||(43410427-43410492)
chr2 (122-261)||(7494920-7495060)
chr2 (216-296)||(16377703-16377787)
chr2 (141-296)||(34120486-34120639)
chr2 (154-282)||(9458327-9458454)
chr2 (219-281)||(19937374-19937436)
chr2 (125-296)||(16463582-16463755)
chr2 (227-296)||(17346409-17346478)
chr2 (119-296)||(25637369-25637547)
chr2 (215-280)||(26863421-26863486)
chr2 (215-296)||(28186199-28186280)
chr2 (113-296)||(34451382-34451562)
chr2 (229-296)||(16805880-16805947)
chr2 (229-296)||(16845161-16845228)
chr2 (219-296)||(34225579-34225656)
chr2 (223-296)||(39785578-39785651)
chr2 (219-296)||(43115849-43115926)
chr2 (224-296)||(31448740-31448812)
chr2 (223-295)||(36794277-36794349)
chr2 (219-278)||(5272204-5272263)
chr2 (229-296)||(18853248-18853315)
chr2 (215-261)||(7438934-7438980)
chr2 (215-296)||(19426442-19426521)
chr2 (222-296)||(32831222-32831296)
chr2 (223-296)||(11742575-11742648)
chr2 (215-296)||(39329711-39329791)
chr2 (217-282)||(43730603-43730667)
chr2 (215-294)||(16807758-16807837)
chr2 (215-294)||(16847039-16847118)
chr2 (229-296)||(45235580-45235647)
chr2 (119-189)||(34120675-34120745)
chr2 (219-296)||(19444135-19444212)
chr2 (219-296)||(26608190-26608267)
chr2 (216-280)||(28170646-28170710)
chr2 (216-267)||(43699672-43699723)
chr2 (217-260)||(45464009-45464052)
chr2 (119-181)||(3601357-3601419)
chr2 (216-266)||(16028301-16028351)
chr2 (219-289)||(17122973-17123043)
chr2 (223-269)||(18202098-18202144)
chr2 (230-259)||(1206775-1206804)
chr2 (215-255)||(25904773-25904813)
chr2 (228-280)||(43730430-43730481)
[»] chr6 (35 HSPs)
chr6 (112-296)||(32440693-32440879)
chr6 (119-296)||(11655994-11656172)
chr6 (119-296)||(29363193-29363372)
chr6 (216-296)||(181542-181622)
chr6 (217-296)||(15058104-15058183)
chr6 (215-296)||(24983497-24983578)
chr6 (215-280)||(34657626-34657691)
chr6 (216-296)||(31894258-31894338)
chr6 (215-296)||(1781789-1781868)
chr6 (219-296)||(13909413-13909490)
chr6 (215-296)||(34299980-34300061)
chr6 (216-296)||(7920225-7920304)
chr6 (229-296)||(3291816-3291883)
chr6 (229-296)||(13087529-13087596)
chr6 (230-296)||(5302351-5302417)
chr6 (219-296)||(4367301-4367378)
chr6 (223-296)||(6801924-6801997)
chr6 (217-278)||(15046111-15046171)
chr6 (219-296)||(33510129-33510206)
chr6 (113-281)||(3720304-3720472)
chr6 (229-296)||(17828939-17829006)
chr6 (229-296)||(30716899-30716966)
chr6 (119-296)||(21010060-21010243)
chr6 (219-296)||(1225037-1225113)
chr6 (223-296)||(11143635-11143708)
chr6 (219-296)||(23142657-23142733)
chr6 (229-296)||(16205207-16205273)
chr6 (215-260)||(21425641-21425686)
chr6 (228-281)||(22398411-22398464)
chr6 (215-260)||(28106013-28106058)
chr6 (220-296)||(1063651-1063727)
chr6 (219-257)||(31283488-31283526)
chr6 (126-191)||(8115177-8115242)
chr6 (219-296)||(17835374-17835450)
chr6 (228-296)||(6834417-6834485)
[»] chr3 (60 HSPs)
chr3 (142-296)||(36476496-36476650)
chr3 (119-296)||(36460465-36460642)
chr3 (119-294)||(17652642-17652816)
chr3 (119-296)||(43253912-43254090)
chr3 (119-296)||(27471224-27471401)
chr3 (127-296)||(30190709-30190878)
chr3 (217-296)||(19611896-19611975)
chr3 (119-280)||(10366714-10366876)
chr3 (219-296)||(37695715-37695792)
chr3 (219-296)||(39043806-39043883)
chr3 (215-296)||(44301547-44301628)
chr3 (222-296)||(19823003-19823077)
chr3 (219-296)||(1778632-1778708)
chr3 (215-296)||(8679103-8679184)
chr3 (215-280)||(12904849-12904914)
chr3 (220-296)||(28690831-28690907)
chr3 (219-296)||(29024015-29024091)
chr3 (216-296)||(11632067-11632147)
chr3 (217-296)||(34750483-34750562)
chr3 (123-296)||(37773013-37773188)
chr3 (217-296)||(49447840-49447919)
chr3 (226-296)||(24569149-24569219)
chr3 (215-293)||(38137498-38137576)
chr3 (219-296)||(3901198-3901275)
chr3 (219-296)||(5322986-5323063)
chr3 (219-296)||(11905811-11905888)
chr3 (216-293)||(23004434-23004511)
chr3 (219-296)||(37497481-37497558)
chr3 (215-296)||(51838008-51838089)
chr3 (216-296)||(12736621-12736701)
chr3 (215-260)||(24703647-24703692)
chr3 (219-296)||(37311939-37312016)
chr3 (228-296)||(36462995-36463063)
chr3 (122-282)||(38795235-38795396)
chr3 (221-269)||(41351640-41351688)
chr3 (229-292)||(3313253-3313316)
chr3 (229-296)||(34957502-34957569)
chr3 (229-288)||(38705174-38705233)
chr3 (215-290)||(40194488-40194563)
chr3 (229-296)||(45710849-45710916)
chr3 (229-296)||(53560216-53560283)
chr3 (215-277)||(40462304-40462366)
chr3 (215-296)||(1018908-1018989)
chr3 (219-268)||(14194545-14194594)
chr3 (219-296)||(19609288-19609365)
chr3 (216-296)||(33491408-33491489)
chr3 (218-267)||(50036510-50036559)
chr3 (223-296)||(54726478-54726551)
chr3 (236-296)||(48541049-48541109)
chr3 (229-296)||(30682115-30682182)
chr3 (216-258)||(31158598-31158640)
chr3 (126-191)||(43715202-43715267)
chr3 (235-284)||(43719272-43719321)
chr3 (216-296)||(30711059-30711139)
chr3 (240-296)||(54477508-54477564)
chr3 (219-282)||(23068187-23068250)
chr3 (229-296)||(52290892-52290959)
chr3 (229-290)||(30861393-30861455)
chr3 (215-296)||(27549334-27549415)
chr3 (229-290)||(41038448-41038509)
[»] scaffold0330 (1 HSPs)
scaffold0330 (222-296)||(5382-5456)
[»] scaffold0095 (2 HSPs)
scaffold0095 (122-296)||(50096-50270)
scaffold0095 (216-296)||(22333-22414)
[»] scaffold0159 (1 HSPs)
scaffold0159 (215-296)||(34068-34149)
[»] scaffold0182 (1 HSPs)
scaffold0182 (219-296)||(20402-20479)
[»] scaffold0012 (1 HSPs)
scaffold0012 (219-295)||(105673-105749)
[»] scaffold0018 (1 HSPs)
scaffold0018 (217-296)||(136086-136165)
[»] scaffold1809 (1 HSPs)
scaffold1809 (215-296)||(733-814)
[»] scaffold0583 (1 HSPs)
scaffold0583 (219-296)||(2014-2091)
[»] scaffold0328 (1 HSPs)
scaffold0328 (223-296)||(8030-8103)
[»] scaffold0110 (2 HSPs)
scaffold0110 (219-296)||(1693-1770)
scaffold0110 (119-189)||(1445-1515)
[»] scaffold0003 (1 HSPs)
scaffold0003 (219-296)||(252854-252930)
[»] scaffold0011 (1 HSPs)
scaffold0011 (216-280)||(14233-14297)
[»] scaffold0016 (1 HSPs)
scaffold0016 (217-266)||(76279-76328)
[»] scaffold0302 (1 HSPs)
scaffold0302 (229-296)||(16097-16164)
[»] scaffold0001 (1 HSPs)
scaffold0001 (219-260)||(143839-143880)


Alignment Details
Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 27896751 - 27897014
Alignment:
Q  18 aatttatcatatccacagccactggtcgacgaagaattgtgaaggatcgataaaattcagtacacatt-gtctagaagggaactgatgggccttcttatt 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||| || || |||||||||| ||||||||||||| |||||||||||| |       
T  27896751 aatttatcatatccacagccactggtctacgaagaattgtgaaggattgatgaattttagtacacatttgtctagaagggaattgatgggccttcct--- 27896847  T
Q  117 agtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnncc 216  Q
          |||||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||       |     
T  27896848 ------tccgtctcaaaataattggctctttaacatattttatttgtctccaaatatttatcactttagaatatctattcagtatatattatttttttcg 27896941  T
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttt 289  Q
    ||||||||||||||||||||| |||||||||||||| || ||||| |||||||  |||||||||| |||||||    
T  27896942 actattatacctttatttattaaatttcatccaactaaattactccactaactataattaataagaatatttt 27897014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 296
Target Start/End: Original strand, 39864007 - 39864177
Alignment:
Q  126 gtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattata 225  Q
    |||||| ||| |||| ||||||||||| ||||  ||  ||| ||||| ||||||||||| |||||| || ||  || |||||       |||||||||||    
T  39864007 gtctcataattattgtctctttagcattttttcatttcctcaaaataattgtcactttacaatatcaatgcaacatttattatttttttccactattata 39864106  T
Q  226 cctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  39864107 cccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtattttagtaaat 39864177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 9307612 - 9307693
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| | |||||||||||    
T  9307612 ccactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaacaagggtgttttagtaaat 9307693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 20210034 - 20209892
Alignment:
Q  154 ttttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaactt 253  Q
    |||||||| |||| ||||| |||||||||||||||| | || ||| || |||||       ||| ||| ||||| |||||||||||| ||||||||||||    
T  20210034 ttttatttttctcaaaataattgtcactttagaataccaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaactt 20209935  T
Q  254 aactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| ||||||| |||||||||||||| |||||||||||    
T  20209934 aactactccactaactacaattaataaggatgttttagtaaat 20209892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 8896460 - 8896384
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||  ||||||||||||||    
T  8896460 attatacctttatttattgaatttcatccaacttaaccactccactaactacaattaataaatatattttagtaaat 8896384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 22856369 - 22856289
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  22856369 cactattatacttttatttattgaatttcatccagcttaactactccactaactacaattaattagggtattttagtaaat 22856289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 35367788 - 35367868
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  35367788 cactattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaat 35367868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 24991786 - 24991721
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  24991786 ccactattatacctttatttattgaatttcatccaacttaactattccactaactacaattaataa 24991721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6785241 - 6785315
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttt 289  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||    
T  6785241 ccactattatacccttatttattgaatttcatcaaacttaactactccactaactacaattaatgaagatatttt 6785315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 917013 - 917090
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||| ||||||||| |||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  917013 tattttacccttatttattaaatttcatgcaacttaactaatctactaactacaattaataagggtattttagtaaat 917090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 7759204 - 7759281
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||| ||||||||||| || ||||||| |||||||||||  |||||||||||||    
T  7759204 tattatacccttatttattgaatttcattcaacttaactattccactaactacaattaataagagtattttagtaaat 7759281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 15699115 - 15699188
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  15699115 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 15699188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 30755070 - 30754993
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||| |||||||||| |  |||||||  ||||||||| |||||||||||||||    
T  30755070 tattatacctttatttattgaatttcatctaacttaactatttcactaactataattaataatgatattttagtaaat 30754993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 289
Target Start/End: Original strand, 38787228 - 38787400
Alignment:
Q  120 ccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn---cc 216  Q
    |||||||||||| |||||||| ||||||| ||| |||||||| |||| ||||| |||||||||||||| | | || ||  || ||||           ||    
T  38787228 ccctccgtctcacaataattgtctctttaccattttttatttttctcaaaataattgtcactttagaaaagcaatgcaaaatttattttttttttttccc 38787327  T
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttt 289  Q
    | ||||||||| |||||||||||||||||||||| |||||||||| |||||||  ||||||||||||| ||||    
T  38787328 attattatacccttatttattgaatttcatccaatttaactactccactaactataattaataaggatgtttt 38787400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 44707893 - 44707812
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||   | |||||||||||    
T  44707893 ccactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataaatgtgttttagtaaat 44707812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 49224111 - 49224038
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  49224111 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 49224038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 52429333 - 52429410
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| ||||||| |||||||||||| ||||||| |||||    
T  52429333 tattatacccttatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttaataaat 52429410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 16395274 - 16395099
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| |   |||| ||| |||| ||||| |||||||||||||||| | ||  || || |||||       | |     
T  16395274 tccctccgtctcacaataattgtctctttacccacttttctttttctcaaaataattgtcactttagaataccaatgtaggatttattatttttttc-at 16395176  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||| |||||||||||||    
T  16395175 tattatatcattatttattgaatttcatctaacttaactactccactaactacaattaaaaagg-tattttagtaaat 16395099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 37276450 - 37276526
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||||||| |||||||||||||||||||||| ||||||| || ||||||| |||||||||||| | ||||||||||    
T  37276450 tattatacccttatttattgaatttcatccaatttaactattccactaactacaattaataagggtgttttagtaaa 37276526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 25089212 - 25089137
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaat-aaggatattttagtaaat 296  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||| |||||||||||    
T  25089212 tatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataaaggatgttttagtaaat 25089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 296
Target Start/End: Complemental strand, 40145027 - 40144899
Alignment:
Q  168 aaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaacttaactactctactaa 267  Q
    ||||| |||||||||||||||||| || ||  || |||||       ||| ||| ||||| |||||||||||| |||||||||||||||||||| | |||    
T  40145027 aaataattgtcactttagaatatcaatgcaacatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccattaa 40144928  T
Q  268 ctccaattaataaggatattttagtaaat 296  Q
    || |||||||||||| | |||||||||||    
T  40144927 ctacaattaataagggtgttttagtaaat 40144899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 31042700 - 31042863
Alignment:
Q  133 aataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttat 232  Q
    |||||||| ||||||| ||| |||| | | |||| ||||| |||||||||||||||||| || ||  || |||||       ||||||| ||| ||||||    
T  31042700 aataattgtctctttatcattttttctctttctcaaaataattgtcactttagaatatcaatacatcatttattatttttttccactatgatatctttat 31042799  T
Q  233 ttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||| |||||||| ||||  |||| || |||||||||||| ||||  |||||||    
T  31042800 ttattgaatttcattcaacttaattacttcactacctacaattaataagggtattacagtaaat 31042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 37539112 - 37539174
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaa 277  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  37539112 ccactatgatacccttatttattgaatttcatcaaacttaactactctactaactacaattaa 37539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 14757727 - 14757646
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||  ||||||| |||||||||||  | |||||||||||    
T  14757727 ccactattatacccttatttattaaatttcatcgaacttaactacttcactaactacaattaataagagtgttttagtaaat 14757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 26093383 - 26093460
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||| |||||| ||||||| ||||  ||||||| |||||||||||||||||||| |||||    
T  26093383 tattatacccttatttattgaacttcatctaacttaattacttcactaactacaattaataaggatattttaataaat 26093460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 28748976 - 28749057
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||  |||||||||||||||||| | |||||||| | |||||||||||| | |||||||||||    
T  28748976 ccactattatacccttatttataaaatttcatccaacttaacaattctactaattacaattaataagggtgttttagtaaat 28749057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 33733456 - 33733314
Alignment:
Q  154 ttttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaactt 253  Q
    |||||||| |||| ||||| |||||||||||||||| | ||  || || |||||       ||| ||||||||| |||||||||||||||||| | || |    
T  33733456 ttttatttttctcaaaataattgtcactttagaataccaatgaagcatttattattcttttccattattatacccttatttattgaatttcattctacct 33733357  T
Q  254 aactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||| |||||||||||| ||||||||||   |||||||||||||    
T  33733356 aaccactctactaactacaattaataaaagtattttagtaaat 33733314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 44761660 - 44761583
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||| ||||||||| | || |||||||  ||||||||| |||||||||||||||    
T  44761660 tattatacccttatttattgaatttcattcaacttaaccattccactaactataattaataaagatattttagtaaat 44761583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 6023782 - 6023702
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||||||||||  | || |||||||||||||||||||||||||||| | ||||| |||||||||| | ||||||||||||    
T  6023782 ccactattatactctcatgtattgaatttcatccaacttaactactccaataactacaattaataaaggtattttagtaaa 6023702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 27721517 - 27721581
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaata 279  Q
    |||||||||||| |||||||||||||||| |||||| ||||||| |||||||||| |||||||||    
T  27721517 ccactattatacttttatttattgaattttatccaatttaactattctactaactacaattaata 27721581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 37506057 - 37506190
Alignment:
Q  163 tctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaacttaactactct 262  Q
    |||| ||||| |||||||||||||||||| || ||  || |||||       ||| ||| ||||| |||||||||||||||||| ||||||||||||||     
T  37506057 tctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactcc 37506156  T
Q  263 actaactccaattaataaggatattttagtaaat 296  Q
    ||||||| ||||||||||   | |||||||||||    
T  37506157 actaactacaattaataaaagtgttttagtaaat 37506190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 35683012 - 35682881
Alignment:
Q  126 gtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattata 225  Q
    ||||||||||||||| ||||||| ||| ||||   | |||| ||||| ||| || ||||||||||| || || ||| |||||       |||||||||||    
T  35683012 gtctcaaaataattgtctctttatcatttttt---tctctcaaaataattgccaatttagaatatcaatgcaatatttattatttttt-ccactattata 35682917  T
Q  226 cctttatttattgaatttcatccaacttaactactc 261  Q
    || |||||||||||||||||||||||||||||||||    
T  35682916 cccttatttattgaatttcatccaacttaactactc 35682881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 12039067 - 12039133
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||| |||||||||||    
T  12039067 ccactattatacccttatttattgaattacatccaacttaaatactccattaactacaattaataag 12039133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 2572458 - 2572519
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||  ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  2572458 tattatatttttatttattgaatttcattcaacttaactactccactaactacaattaataa 2572519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 10495828 - 10495889
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  10495828 tattatatatttatttattgaatttcatccaacttaactactccactaattacaattaataa 10495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 13579750 - 13579673
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||| || | |||| ||||||    
T  13579750 tattatacccttatttattgaatttcatcaaacttaaatactccactaactacaattaatatgggtgtttttgtaaat 13579673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 36701910 - 36701987
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||| |||||||| | || ||||||| ||||||||||||  ||||||||||||    
T  36701910 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaat 36701987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 36718014 - 36718091
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||| |||||||| | || ||||||| ||||||||||||  ||||||||||||    
T  36718014 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaat 36718091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 4441732 - 4441656
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||||||||||||||||| ||||||||| || |||| ||||| ||||||| ||||||| |||| | ||||||||||    
T  4441732 tattatacctttatttattaaatttcatctaatttaattactccactaactacaattaacaagggtgttttagtaaa 4441656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 39887821 - 39887892
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatt 287  Q
    |||| |||||| |||||||||||||||||||| ||||||| ||||| ||||||| | |||||||| ||||||    
T  39887821 cactgttatacatttatttattgaatttcatcaaacttaattactcaactaactactattaataaagatatt 39887892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 9379220 - 9379298
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactact-ctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| |||||||| ||||||||| |||||||||||| | ||||||| ||||||||||  |||||||| |||||    
T  9379220 tattatacctatatttattaaatttcatcaaacttaactactcccactaactacaattaataaatatattttaataaat 9379298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 52837269 - 52837343
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    ||||||||||||| |||||||||||||| ||  |||||||||| |||| || |||||||||||  ||||||||||    
T  52837269 tattatacctttaattattgaatttcattcatattaactactccactagctacaattaataagagtattttagta 52837343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 269
Target Start/End: Original strand, 4659666 - 4659815
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||| ||| ||| ||| |||| ||||| |||||||||||||| |||| ||||| ||||||||||| |||| | || ||  || ||||        ||||    
T  4659666 tcccttcgtgtcataattattgtctcttcagcatattttatttttctcaaaataattgtcactttacaataccaatgcaacat-tatttattttttccac 4659764  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaact 269  Q
    ||||||| | |||||||||||||||||| |||||||| ||||| |||||||    
T  4659765 tattatatccttatttattgaatttcattcaacttaattactccactaact 4659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 6160588 - 6160511
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| || ||||||||||| ||| ||||||||||| || | ||||| |||||||||||  |||||||||||||    
T  6160588 tattatacccttgtttattgaattacattcaacttaactattccattaactacaattaataagagtattttagtaaat 6160511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 7351625 - 7351702
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||||||||||||||  |||||||||| || || |||||||  ||||||||||| |||||||||||||    
T  7351625 tattatactcttatttattgaattttgtccaacttaattattccactaactagaattaataaggttattttagtaaat 7351702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 11449875 - 11449935
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||||| |||||||||||||||||||| || ||||||||| ||||| ||||||||||    
T  11449875 tattatacctt-atttattgaatttcatccaattttactactctattaactacaattaataa 11449935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 23169126 - 23169045
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||  ||||||||||||||||| |  ||||||||| |  |||||||  ||||||||||||| |||||||||||    
T  23169126 ccactattatactcttatttattgaatttcacctcacttaactatttaactaactataattaataaggatgttttagtaaat 23169045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 29778529 - 29778448
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||   ||||||||||||||| ||||||||||  | ||  ||||||| |||||||||| |||||||||||||||    
T  29778529 ccactattatattattatttattgaattttatccaacttaggttcttaactaactacaattaataatgatattttagtaaat 29778448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 37177822 - 37177886
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||  ||||||||| ||||| |||||||||||||||| |||||||| | ||||||||    
T  37177822 cactattatactcttatttatttaattttatccaacttaactactatactaactaccattaataa 37177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 31978781 - 31978706
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaa 294  Q
    ||||||||| ||||||| ||||||| || |||||||||||||| | |||||  |||||||||| ||| ||||||||    
T  31978781 tattatacccttatttaatgaatttaattcaacttaactactccattaactataattaataagaatagtttagtaa 31978706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 34031768 - 34031579
Alignment:
Q  111 cttattagtccctccgtctca----aaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatatt 206  Q
    ||||||| |||||||||||||    ||||||||| ||||||| ||| || | ||| |||  ||||| |||||  |||||| |||| || ||| || ||||    
T  34031768 cttattactccctccgtctcacgataaataattgtctctttaacattttctctttttcttaaaataattgtcgttttagactatcaatgcagcatttatt 34031669  T
Q  207 annnnnnnccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |       ||| ||||||||  |||||||||||||||||| |||| | |||| |  ||||||| |||||||||| | |||||||||||||    
T  34031668 atgtttttccattattatactcttatttattgaatttcattcaaccttactattacactaactacaattaataacggtattttagtaaat 34031579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 15904751 - 15904817
Alignment:
Q  230 tatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||    |||||||||||  ||||||| |||||||||||||||||||| |||||    
T  15904751 tatttattgaatttcacttcacttaactacttcactaactacaattaataaggatattttaataaat 15904817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 24880874 - 24880942
Alignment:
Q  231 atttattgaatttcatccaact---taactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||   ||||||||| ||||||| ||||||||||   |||||||||||||    
T  24880874 atttattgaatttcatccaacttactaactactccactaactacaattaataaaagtattttagtaaat 24880942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 26256221 - 26256159
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaa 277  Q
    |||||||||||   || |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  26256221 ccactattatattcttctttattgactttcatccaacttaactactctattaactacaattaa 26256159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 26258070 - 26257992
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| ||||||| ||  ||||||||||||||| || |||||||||  | |||||||| | |||||||||||||    
T  26258070 ctattatacccttatttactggttttcatccaacttaattattctactaaccacgattaataaaggtattttagtaaat 26257992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 2137498 - 2137437
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||| | ||||  ||||||||||    
T  2137498 tattatatctttatttattgaattttatccaacttaaatactccaataacaacaattaataa 2137437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 3260590 - 3260643
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    ||||||||| ||||||||| ||||||||| ||| ||||||| ||||||||||||    
T  3260590 ttatttattcaatttcatcaaacttaacttctccactaactacaattaataagg 3260643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 32219790 - 32219713
Alignment:
Q  220 attatacctttattt-attgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| || ||||  ||||||||||  ||||||| |||||    
T  32219790 attatacatttattttattgaatttcatccaacttaaccactccacaaactataattaataagagtattttaataaat 32219713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 42409991 - 42410060
Alignment:
Q  227 ctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||| ||||||| |||||||||  | ||||||| |||||||||||| |  ||||||||||    
T  42409991 ctttatttattgaacttcatcctacttaactatccaactaactacaattaataagggtgctttagtaaat 42410060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 24500110 - 24500058
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaac 268  Q
    |||||||| ||| |||||| |||||||||||| ||||||||||||| ||||||    
T  24500110 cactattacaccattatttgttgaatttcatctaacttaactactcaactaac 24500058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 41080586 - 41080656
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattt 288  Q
    |||||| |||||||||||||||||| ||||||||||||| || ||| ||||| | |||||||||| |||||||    
T  41080586 cactatcatacctttatttattgaa-ttcatccaacttacct-ctccactaattacaattaataaagatattt 41080656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 9412922 - 9412855
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||  ||||| || | ||||| |||||||| || |||||||| |||||    
T  9412922 ttatttattgaatttcatccaacccaactattccattaactacaattaatcagaatattttattaaat 9412855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 32826119 - 32826081
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactc 261  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  32826119 atacccttatttattgaacttcatccaacttaactactc 32826081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 41121919 - 41121877
Alignment:
Q  254 aactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| ||||||| |||||||||||| |||||||||||||    
T  41121919 aactactccactaactacaattaataagggtattttagtaaat 41121877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 43500965 - 43500899
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaata 189  Q
    ||||||||| |||||||| ||||||| ||| |||  ||| |||| ||||| ||||||||||||||||    
T  43500965 tccgtctcacaataattgtctctttaccatttttattttttctcaaaataattgtcactttagaata 43500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 45331339 - 45331407
Alignment:
Q  231 atttattgaatttcatccaacttaacta---ctctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| |||||||||||||||||   ||| | ||||| |||||||||||| | |||||||||||    
T  45331339 atttattgaacttcatccaacttaactattcctccattaactacaattaataagggtgttttagtaaat 45331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 26258163 - 26258098
Alignment:
Q  124 ccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatc 191  Q
    |||| |||||||||||| |||||||  |||| | ||||||||  ||||| ||||||||||||||||||    
T  26258163 ccgtgtcaaaataattgtctcttta--atatataatttgtcttaaaataattgtcactttagaatatc 26258098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 32970683 - 32970619
Alignment:
Q  232 tttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||| || | |||||||  ||||||||| |  |||||||||||||    
T  32970683 tttattgaattttatccaacttaattattttactaacaacaattaatacgagtattttagtaaat 32970619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 759324 - 759147
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| |||||||||||||||| | || ||| || |||||       |||     
T  759324 tccctccgtctcacaataattgtctctttaccatcttttctttttctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccat 759225  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||    
T  759224 tattatacccttatttattgaatttcatccaacttaactactccgctaactacaattaataaggatgttttagtaaat 759147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 11373661 - 11373484
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| ||| |||| ||||||| ||| |||| ||| |||| ||||| |||| |||||| |||||| || ||| || |||||       ||||    
T  11373661 tccctccgtctcacaattattgtctctttaccattttttctttttctcaaaataattgttactttacaatatcaatgcagcatttattattttttcccac 11373562  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  11373561 tattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 11373484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 28202542 - 28202365
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| |   |||||||| |||| ||||| |||||||||||||||| | || ||| || |||||       |||     
T  28202542 tccctccgtctcacaataattgtctctttatccatttttatttttctcaaaataattgtcactttagaataccaatacagcatttattatttttttccat 28202443  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||    
T  28202442 tattatactcttatttattgaatttcatccaactttactactccactaactacaattaataaggatgttttagtaaat 28202365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 22738693 - 22738774
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  22738693 ccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaatgaggatattttagtaaat 22738774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 34947395 - 34947573
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatatttta-tttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnncca 217  Q
    ||||||||||||| |||| ||| ||||||||||| ||||  ||| |||| ||||| |||||||||||||||| | || ||  || |||||       |||    
T  34947395 tccctccgtctcacaatatttgtctctttagcatttttttctttttctcaaaataattgtcactttagaataccaatgcaacatttattatttttttcca 34947494  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
     ||||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  34947495 ttattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 34947573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 21350762 - 21350681
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  21350762 ccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 21350681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 25571316 - 25571492
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    |||||||||||||||||||||| |||||||  || |||| ||| |||| ||||| |||||||||||||||| | || ||  || |||||         |     
T  25571316 tccctccgtctcaaaataattgtctctttactattttttctttttctcaaaataattgtcactttagaataccaatgcaacatttattattttttta-at 25571414  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||||| ||| |||||||| |||||||||||||    
T  25571415 tattatacccttatttattgaatttcatccaacttaactattccactaactacaactaataagggtattttagtaaat 25571492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 24516426 - 24516345
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  24516426 ccactattttatctttatttattgaatttcatccaacttaactactccactaactacaattaataaggtttttttagtaaat 24516345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 46478430 - 46478349
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||    
T  46478430 ccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataagggtattttagtaaat 46478349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 48608763 - 48608937
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| ||||| || ||||||| ||| |||| ||| |||| ||||| ||||||||||| |||||  || |||||| |||||       |||     
T  48608763 tccctccgtctcataataactgtctctttaccatcttttctttttctcaaaataattgtcactttaaaatattaatgcagtatttattatttttt-ccat 48608861  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaa 294  Q
    ||||||||  |||||||||||||||||||||||||||||||   ||||||| | |||||||||||| |||||||||    
T  48608862 tattatactcttatttattgaatttcatccaacttaactacatcactaactacgattaataaggatgttttagtaa 48608937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 21390291 - 21390368
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||| |||||||||||    
T  21390291 tattatacccttatttattgaatttcatctaacttaactactccactaactacaatcaataaggatgttttagtaaat 21390368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 2459464 - 2459544
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||||| | || ||||||||    
T  2459464 cactattatacccttatttattgaatttcatcctacttaactactccactaactacaattaataagggtgttgtagtaaat 2459544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 7463206 - 7463286
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||| |||||||    
T  7463206 cactattctatctttatttattgaatttcatccaacttaactactccactaactacaattaatgagggtatttaagtaaat 7463286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 34100683 - 34100603
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||  | ||||| |||||||||| |||||||||||||||    
T  34100683 cactattatacccttatttattgaatgtcatccaacttaactacttcagtaactacaattaataaagatattttagtaaat 34100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 3178334 - 3178260
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| | | |||||||||||    
T  3178334 tatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaaggtgttttagtaaat 3178260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 83280 - 83458
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn-cca 217  Q
    ||||||||||||  |||||||| ||| ||| ||| |||| ||| |||| ||||| |||||||||||||||| | || ||| || |||||        |||    
T  83280 tccctccgtctcgcaataattgtctcattaccatcttttctttttctcaaaataattgtcactttagaataccaatgcagcatttattattttttttcca 83379  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
     ||| ||||  ||||||||||||||||||| |||||||||||||  |||||| ||||||||||| || |||||||||||    
T  83380 ttatcatactcttatttattgaatttcatcaaacttaactactccgctaactacaattaataagaatgttttagtaaat 83458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 26974018 - 26974099
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||| | |||||||| |||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  26974018 ccactattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataagagtattttagtaaat 26974099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 293
Target Start/End: Complemental strand, 32346285 - 32346111
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| ||||||   |||||||| || |||||||| |||| ||||| || ||| |||||||||   || ||| || |||||       |||     
T  32346285 tccctccgtctcacaataataacctctttagaattttttatttttctcaaaataattatcattttagaatactaatgcagcatttattatctttttccat 32346186  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||| |  ||||||||||  ||||||||||    
T  32346185 tattatacccttatttattgaatttcattcaacttaactactccactaattataattaataagagtattttagta 32346111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 41506198 - 41506121
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  | |||||||||||    
T  41506198 tattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaat 41506121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 43873854 - 43873996
Alignment:
Q  154 ttttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaactt 253  Q
    |||| ||| |||| ||||| |||||||||||||||||| || ||| || |||||       ||| ||| |||| |||||||||| || ||||||||||||    
T  43873854 ttttctttttctcaaaataattgtcactttagaatatcaatgcagcatttattattttttcccattataatacatttatttattaaacttcatccaactt 43873953  T
Q  254 aactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| ||||||| || ||||||||| | |||||||||||    
T  43873954 aactactccactaactacatttaataagggtgttttagtaaat 43873996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 296
Target Start/End: Complemental strand, 21760213 - 21760040
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactatt 222  Q
    ||||||||| |||||||| ||||||| ||  |||| ||| |||| ||||| |||||||||||||||||| || ||  || |||||       ||  ||||    
T  21760213 tccgtctcacaataattgtctctttaccagtttttctttttctcaaaataattgtcactttagaatatcaatgcaacatttattatatttttcctttatt 21760114  T
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| | | ||||||||||||||||||||||||||||| | ||||| |||||| ||||| | ||||| |||||    
T  21760113 ataccctcaattattgaatttcatccaacttaactactccattaactacaattagtaagggtgttttattaaat 21760040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 296
Target Start/End: Original strand, 37245592 - 37245763
Alignment:
Q  124 ccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactatta 223  Q
    |||||||| ||| |||| |||||||||| ||||| ||| |||| ||||| ||||||||||| |||| | || ||  || |||||        ||||||||    
T  37245592 ccgtctcacaattattgtctctttagca-attttttttttctcaaaataattgtcactttacaataccaatgcaacatttattattttttctcactatta 37245690  T
Q  224 tacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||||||||||||||||||||||||||| |||| ||| | | |||||||||||  | |||||||||||    
T  37245691 tacccttatttattgaatttcatccaacttaaccactccacttattacaattaataagagtgttttagtaaat 37245763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 9785984 - 9786061
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||| ||||||||||||||||  ||||||| |||||||||||  | |||||||||||    
T  9785984 tattatacccttatttattgaattttatccaacttaactacttcactaactacaattaataagcgtgttttagtaaat 9786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 13961965 - 13962026
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttta 290  Q
    ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  13961965 ttatttattaaatttcatccaacttaactactccactaactacacttaataaggatatttta 13962026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 28103725 - 28103806
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||  ||||||| |||||||||||| | |||| ||||||    
T  28103725 ccactattatacgcttatttattgaatttcatccaacttaaccacttcactaactacaattaataagggtgttttggtaaat 28103806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 30865963 - 30866040
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||| |  ||||||||||  |||||||||||||    
T  30865963 tattatatctttatttattgaatttcatctaacttaactactccactaattataattaataagagtattttagtaaat 30866040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 36790736 - 36790809
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagt 292  Q
    ||||||||| |||||||||||||||||||| || ||||||||| ||||||| |||||||||||| | |||||||    
T  36790736 tattatacccttatttattgaatttcatccgacataactactcaactaactacaattaataagggtgttttagt 36790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 6495166 - 6494990
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| |   |||| ||| |||| ||||| |||||||||||||||||| ||  || || ||||        | |     
T  6495166 tccctccgtctcataataattgtctctttacccatttttctttttctcaaaataattgtcactttagaatatcaatgtagcatttattttttttttc-at 6495068  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||   | |||||||||||    
T  6495067 tattatacccttatttattaaatttcatccaactttactactccactaactacaattaataaaagtgttttagtaaat 6494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 296
Target Start/End: Original strand, 38391641 - 38391821
Alignment:
Q  112 ttattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnn 211  Q
    |||||| ||||||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| ||||||||||| |||||| ||     || |||||        
T  38391641 ttattactccctccgtctcacaataattgtctctttaccattttttctttttctcaaaataattgtcactttataatatcaat-----atttattatttt 38391735  T
Q  212 nnnc-cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
         || |||||||| |||||||||||||||||||||||||||| || || ||||||| ||||||| |||  | |||||||||||    
T  38391736 tttttcattattatacttttatttattgaatttcatccaacttaattattccactaactacaattaacaagagtgttttagtaaat 38391821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 49101659 - 49101719
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaata 279  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  49101659 tattatacttttatttattgaatttcattcaacttaactactccactaactacaattaata 49101719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 19271866 - 19271805
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||||||| ||||||||||    
T  19271866 tattatacccttatttattaattttcatccaacttaactactccactaactacaattaataa 19271805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 23670381 - 23670559
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnncca- 217  Q
    ||||||||||||| ||| |||  ||||||||||| |||||||| |||| ||||| ||||||||||| ||||   || ||  || |||||       ||      
T  23670381 tccctccgtctcacaattattatctctttagcattttttatttttctcaaaataattgtcactttacaatactaatgcatcatttattattttccccccg 23670480  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||  ||||||||| ||||||||| ||||||||||||| ||||||| | |||||||||  | |||||||||||    
T  23670481 ctattatactcttatttattaaatttcatcaaacttaactactccactaactaccattaataagagtgttttagtaaat 23670559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 32018849 - 32018768
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||  || ||||||||| ||||| ||||||||||| ||||||||||||  |||||||||||  |||||||||||||    
T  32018849 ccactattaagcccttatttattaaatttaatccaacttaattactctactaacgacaattaataagagtattttagtaaat 32018768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 32019053 - 32018972
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||  || ||||||||| ||||||||||||||||| ||||| ||||||  |||||||||||  |||||||||||||    
T  32019053 ccactattaatcccttatttattaaatttcatccaacttaattactccactaacaacaattaataagagtattttagtaaat 32018972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 8592575 - 8592496
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||  ||||||||| ||||||||| ||||| ||||||| ||||||| |||||||||||| | ||||| |||||    
T  8592575 actattatactcttatttattaaatttcatctaactttactactccactaactacaattaataagggtgttttattaaat 8592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 40076214 - 40076358
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    |||||| |||||| |||||| | ||||||| ||| |||| ||| |||| ||||| ||||||||||| |||| | || ||| || |||||       |||     
T  40076214 tccctctgtctcacaataatagtctctttaccattttttctttttctcaaaataattgtcactttataataccaatgcagcatttattatttttttccat 40076313  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactcta 263  Q
    ||| | ||| |||||||||||||||||||||||||||||| ||||    
T  40076314 tatcacacccttatttattgaatttcatccaacttaactaatcta 40076358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 5524369 - 5524437
Alignment:
Q  215 ccactattatacctttatttattga---atttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||||||||||||||||| |   |||||||||||||||||||||| |||||||  |||||||||    
T  5524369 ccactattatacctttatttattaataaatttcatccaacttaactactcaactaactataattaataa 5524437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 16560679 - 16560626
Alignment:
Q  243 tcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||| | ||||||| |||||||||||||| |||||||||||    
T  16560679 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaat 16560626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 16604983 - 16605036
Alignment:
Q  243 tcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||| | ||||||| |||||||||||||| |||||||||||    
T  16604983 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaat 16605036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 29835550 - 29835470
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||||   ||||| |||||||||||  | |||||||||||    
T  29835550 ccactattatatctttatttattgaattacatccaac-taactactccgttaactgcaattaataagagtgttttagtaaat 29835470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 35333051 - 35333116
Alignment:
Q  231 atttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||||||||||| ||||||||||||| ||||||| ||||||||||  |||||||| |||||    
T  35333051 atttgttgaatttcatctaacttaactactccactaactacaattaataataatattttaataaat 35333116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 31930622 - 31930559
Alignment:
Q  229 ttatttattgaatttcatccaacttaac--tactctactaactccaattaataaggatatttta 290  Q
    ||||||||||||||||||| ||||||||  ||||| ||||||| |||||||||||| |||||||    
T  31930622 ttatttattgaatttcatcaaacttaactatactccactaactacaattaataagggtatttta 31930559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 17610896 - 17610975
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||| | ||||||||||||||||||||||||| |  | ||||| |||||||||   ||||||||||||||    
T  17610896 actattatatctttgtgtattgaatttcatccaacttaactatttcaataactacaattaatacaaatattttagtaaat 17610975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 31665840 - 31665773
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| || ||| || |||||||||||||||||| | ||||||||  ||||||||||||||    
T  31665840 ttatttattgaaatttatctaatttaactactctactaactactattaataaatatattttagtaaat 31665773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 44424144 - 44424203
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    ||||| |||||||||||| |||||||||||||| ||||| ||||||| || |||||||||    
T  44424144 atacccttatttattgaacttcatccaacttaattactccactaactacatttaataagg 44424203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 47045608 - 47045541
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||  ||||||  ||||||| ||||    
T  47045608 ccactattatactcttatttgttgaatttcatccaacttaactactacactaaccacaattaacaagg 47045541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 33819207 - 33819272
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    |||||||||||| ||||||| |||||||||| |||||| ||||||| || |||  |||||||||||    
T  33819207 cactattatacccttatttaatgaatttcattcaacttcactactccacaaacaacaattaataag 33819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 16904371 - 16904411
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaa 255  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  16904371 ccactattatacccttatttattgaatttgatccaacttaa 16904411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 24166984 - 24167064
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||| || |||||| ||||||||||| |||  ||||||||  ||||||| | |||||||||| |||||||||||||    
T  24166984 cacttttattcccttatttcttgaatttcattcaatgtaactactgcactaactactattaataagggtattttagtaaat 24167064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 30546485 - 30546413
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaa 294  Q
    |||||| |||||||||||||||||  | |||||||||||| | ||||| |||||||||| | | |||||||||    
T  30546485 tatacccttatttattgaatttcactccacttaactactccaataactacaattaataaaggtgttttagtaa 30546413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 42796011 - 42796081
Alignment:
Q  229 ttatttattgaatttcatccaactt---aactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| |||||||||||||||||   |||||||| ||||||| |||||||||||| | ||||| |||||    
T  42796011 ttatttaatgaatttcatccaacttaacaactactccactaactacaattaataagggtgttttaataaat 42796081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 42935664 - 42935734
Alignment:
Q  229 ttatttattgaatttcatccaacttaa---ctactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||||   || ||| ||||||| |||||||||||| | |||||||||||    
T  42935664 ttatttattgaacttcatccaacttaactcctcctccactaactacaattaataagggtgttttagtaaat 42935734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 26973918 - 26973961
Alignment:
Q  114 attagtccctccgtctcaaaataattgactctttagcatatttt 157  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||    
T  26973918 attactccctccgtctcacaataattgtctctttagcatatttt 26973961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 31930737 - 31930663
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagca--tattttatttgtctctaaatatttgtcactttagaatatc 191  Q
    ||||||||||||| |||||| | ||||||||||  | |||| ||| |||| ||||| ||||||||||||||||||    
T  31930737 tccctccgtctcataataatagtctctttagcattttttttctttttctcaaaataattgtcactttagaatatc 31930663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 17828483 - 17828422
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    ||||||| | |||||||||||||| |||||||||||| ||||| ||||||| ||||| |||||    
T  17828483 tattatatcattatttattgaatt-catccaacttaattactccactaactacaattgataag 17828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 21390190 - 21390260
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaata 189  Q
    ||||||||| | | |||||||| ||||||||||| |||| ||| |||| ||||| ||||||||||| ||||    
T  21390190 tccctccgtgttacaataattgtctctttagcatcttttctttttctcaaaataattgtcactttataata 21390260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 7457558 - 7457477
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||  ||||||||||||||| ||  ||||||| || ||  |||||| || ||||||||| | |||||||||||    
T  7457558 ccactattatactcttatttattgaatttaatttaacttaattattccgctaactacatttaataagggtcttttagtaaat 7457477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 27920994 - 27921046
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    ||||| |||||| ||||||||||||||||| |  ||||||| |||||||||||    
T  27920994 ttattgattgaacttcatccaacttaactaatgcactaactacaattaataag 27921046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 17719480 - 17719308
Alignment:
Q  124 ccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactatta 223  Q
    ||||||| |||||||||   ||||||||| |||||||| |||||||||| |||||||||||||||| | || ||  || |||||       ||| |||||    
T  17719480 ccgtctccaaataattgtaactttagcattttttatttttctctaaataattgtcactttagaataccaatgcaacatttattatctttttccattatta 17719381  T
Q  224 tacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  17719380 tacctttatttattaaatttcatccaacttaactactccactaactataattaataaggatattttagtaaat 17719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 11977064 - 11976986
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  11977064 ctattatacctttatttattgaatttcatctaacttaactactctactaactacaattaataagggtattttagtaaat 11976986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 44761719 - 44761544
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| ||| |||| |||| |||||| |||| ||| |||| ||||| ||||||||||| |||| | || ||| ||||  ||       ||||    
T  44761719 tccctccgtctcacaattattgtctctctagcattttttctttttctcaaaataattgtcactttacaataccaatgcagcatat--tagttttttccac 44761622  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  44761621 tattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 44761544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 26626345 - 26626162
Alignment:
Q  113 tattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnn 212  Q
    ||||| ||| |||||||||||||||||| ||||||| |   |||| ||| |||| ||||| ||||||||||| |||||| || ||| || |||||         
T  26626345 tattactccatccgtctcaaaataattgtctctttatccatttttctttttctcaaaataattgtcactttaaaatatcaatgcagcatttattattttt 26626246  T
Q  213 nnccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
      ||| ||||||||| |||||||||||||||||| ||||   ||||||| ||||||| |||||||||||||||||||| |||||    
T  26626245 tcccattattatacccttatttattgaatttcattcaaccggactactccactaactacaattaataaggatattttaataaat 26626162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 296
Target Start/End: Original strand, 39405654 - 39405828
Alignment:
Q  122 ctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactat 221  Q
    |||||||||| |||||||| ||||||||||| |||| | | | || ||||| |||||||||||||||||| || ||| || |||||        ||||||    
T  39405654 ctccgtctcataataattgtctctttagcattttttttctttgtcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactat 39405753  T
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| ||||||||| |||||||| |||||||| ||||| |||||||  ||||||||| |||||| ||||||||    
T  39405754 tatacccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaat 39405828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 296
Target Start/End: Original strand, 39482505 - 39482681
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac---t 219  Q
    ||||||||||||| |||| ||||||||||  |||||||| |||| ||||| ||||||||||| |||| | || |||||| |||||       ||||   |    
T  39482505 tccgtctcaaaattattgtctctttagcaatttttatttttctcaaaataattgtcactttacaataccaatgcagtatttattattttttcccactatt 39482604  T
Q  220 attatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| |||||||||||||||||| | ||||||||| || |||||||  ||||||||||| | |||||||||||    
T  39482605 attatacccttatttattgaatttcattccacttaactagtccactaactataattaataagggtgttttagtaaat 39482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 31082608 - 31082685
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||| | |||||||||||    
T  31082608 tattatacctttatttattaaatttcatccaacttaactactccactaactataattaataagggtgttttagtaaat 31082685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 21216215 - 21216151
Alignment:
Q  232 tttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  21216215 tttattgaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaat 21216151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 32678402 - 32678469
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  32678402 ttatttatttaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaat 32678469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 296
Target Start/End: Original strand, 32476183 - 32476353
Alignment:
Q  125 cgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattat 224  Q
    ||||||| |||||| | ||||||||||| |||| ||| |||| ||||| |||||||||||||||| | || |||  |||||||       | | | ||||    
T  32476183 cgtctcacaataatagtctctttagcattttttctttttctcaaaataattgtcactttagaataccaatgcagcgtatattatttttttc-attgttat 32476281  T
Q  225 acctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||| ||||||||||||||||||| ||||||||||||  | ||||| |||||||||||| ||||||| |||||    
T  32476282 acccttatttattgaatttcatcaaacttaactacttcattaactacaattaataagggtattttaataaat 32476353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 280
Target Start/End: Complemental strand, 34948918 - 34948753
Alignment:
Q  113 tattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnn 212  Q
    ||||| ||||||||||||| |||| ||| || |||||||| |||| ||| |||| ||||| |||| ||||||||||| | || || ||| |||||         
T  34948918 tattactccctccgtctcataatatttgtctatttagcattttttctttttctcaaaataattgttactttagaataccaatgcaatatttattattttt 34948819  T
Q  213 nnccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
      | | | ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  34948818 ttc-attgttatacctt-atttattgaatttcatccaacttaactactccactaactacaattaataa 34948753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 9300244 - 9300163
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||| |||||||  ||||||||||| | |||||||||||    
T  9300244 ccactattatatccttatttattgaatttcattcaacttaactactccactaactaaaattaataagggtgttttagtaaat 9300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 27294183 - 27294110
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||  |||||||||||||    
T  27294183 tatacatttatttattgaatttcatccaacttaattactccactaactgcaattaataaatatattttagtaaa 27294110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 45425797 - 45425716
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||| ||||||||||| || ||||| |||||    
T  45425797 ccactattatacccttatttattgaatttcatacaacttaattactccactaactacaattaataagaatgttttaataaat 45425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 4924197 - 4924117
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||| ||||||||| | |||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  4924197 cactaatatacccttatttattaagtttcattcaacttaactactctattaactacaattaataaagatattttagtaaat 4924117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 43719365 - 43719286
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||||||||||||| || || |||||||  ||||||||| | ||||||| |||||    
T  43719365 actattatacctttatttattgaatttcatccaacttaattattcaactaactataattaataatgttattttaataaat 43719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 4428482 - 4428401
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||||||||| |||||||||| |  ||||||| ||||||||||   |||||||||||||    
T  4428482 ccactattatacttttatttattgaatttcatctaacttaactaattcactaactacaattaataattgtattttagtaaat 4428401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 7172899 - 7172980
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||  | ||||| ||||||||||  || |||||||||||    
T  7172899 ccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataaatatgttttagtaaat 7172980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 10098110 - 10098041
Alignment:
Q  227 ctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| | || ||||||||    
T  10098110 ctttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttatagtaaat 10098041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 10180074 - 10179997
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||| |||||||||||| |||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  10180074 tattatacacttattaattgaatttcattcaacttaactactccactaactacaattaataagtgtattttagtaaat 10179997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 13335205 - 13335266
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  13335205 tattataccctgatttattgaatttcatcaaacttaactactctactaactgcaattaataa 13335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 17823906 - 17823986
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||  ||||||| |||||||||| | |||| |||||||    
T  17823906 ccactattatactattatttatttaatttcatccaacttaactacttcactaactacaattaataaaggtattctagtaaa 17823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 42886990 - 42887066
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||  ||||||||||||||| ||||||||||||||| | ||||||| |||||||||| | |||||||||||||    
T  42886990 attatactcttatttattgaattttatccaacttaactacgccactaactacaattaataaaggtattttagtaaat 42887066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 31271013 - 31271084
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||||  ||||||||||  ||||||||||    
T  31271013 tatacccttatttattgaattttatccaacttaactactccactaactataattaataagagtattttagta 31271084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 29226655 - 29226593
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    |||| |||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  29226655 tattgtacccttatttattgaatttcatctaacttaactactccactaactacaattaataag 29226593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 282
Target Start/End: Complemental strand, 39301183 - 39301020
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    |||||||| |||| |||||||| || |||| ||| |||| ||| |||| ||||| |||||| ||||||||||| ||  |   | |||||       |||     
T  39301183 tccctccgcctcataataattgtctttttatcatcttttttttctctcaaaataattgtcattttagaatatcaatgaatcgtttattattattttccat 39301084  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    |||||||| ||||||||||||||||||| ||||| |||||||  ||||||| ||||||||||||    
T  39301083 tattatacttttatttattgaatttcattcaactgaactacttcactaactacaattaataagg 39301020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 22771962 - 22771885
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||  ||||||| |||||||||||| | ||||| |||||    
T  22771962 tattatacccttatttattgaatttcatccaacataattacttcactaactacaattaataagggtgttttaataaat 22771885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 31231723 - 31231796
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| || ||||||||||||||||| ||||||| |||||||||||| | ||| |||||||    
T  31231723 atacccttatttattgaactttatccaacttaactactccactaactacaattaataagggtgtttcagtaaat 31231796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 1739529 - 1739609
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| ||||||| ||||||||| ||||||||| || |||||||||  ||||||| ||||||||||| ||||||| ||||||    
T  1739529 cacttttatacccttatttattaaatttcatcaaaattaactacttaactaactacaattaataagaatattttggtaaat 1739609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 36007017 - 36006941
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagt 292  Q
    ||||||||| |  ||||||||||||||||||| ||||||| ||| | ||||||| ||||||||| ||||||||||||    
T  36007017 cactattatgctcttatttattgaatttcatcaaacttaattaccccactaactacaattaatagggatattttagt 36006941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 40996482 - 40996415
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||||| | |  ||||||| |||||||||||| | |||||||||||    
T  40996482 ttatttattgaatttcatccaacttaaccatttcactaactacaattaataagggtgttttagtaaat 40996415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 396738 - 396661
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||| ||||||||| ||||||  ||||||||  | ||||| ||||||||||||||||| ||||||||    
T  396738 tattatacccttattaattgaattttatccaatataactacttcattaactacaattaataaggatattgtagtaaat 396661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 5053280 - 5053203
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||| |||||||| ||||||||||  |||||| |||||||||||  | |||||||||||    
T  5053280 tattatactcttatttattgaatctcatccaatttaactactccgctaactacaattaataagactgttttagtaaat 5053203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 14855065 - 14855000
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||||||| || ||||||||||||||| || | ||||||||| ||||||| ||||||||||    
T  14855065 ccactattataccattctttattgaatttcattcagcctaactactccactaactacaattaataa 14855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 50731 - 50832
Alignment:
Q  145 tttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttc 244  Q
    |||||||| |||||||| |||  ||||| |||||||||||||||||| || ||| || |||||       ||| ||||||||||||||||||| ||||||    
T  50731 tttagcattttttatttttcttaaaataattgtcactttagaatatcaatgcagcatttattatctttttccattattatacctttatttattaaatttc 50830  T
Q  245 at 246  Q
    ||    
T  50831 at 50832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 40996594 - 40996518
Alignment:
Q  113 tattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaata 189  Q
    ||||| ||||||||||||| ||||||||  |||||| ||| |||| ||| |||| ||||| ||||||||||||||||    
T  40996594 tattactccctccgtctcacaataattgtttctttaccattttttctttttctcaaaataattgtcactttagaata 40996518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 10953862 - 10953788
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||| |||||||||| ||| ||||||||||||| |||||   |||||||||||| | |||||||||||    
T  10953862 tattatacccttatatattgaatttgatctaacttaactactccactaa---caattaataagggtgttttagtaaat 10953788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 10961867 - 10961793
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||| |||||||||| ||| ||||||||||||| |||||   |||||||||||| | |||||||||||    
T  10961867 tattatacccttatatattgaatttgatctaacttaactactccactaa---caattaataagggtgttttagtaaat 10961793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 31331419 - 31331474
Alignment:
Q  241 tttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||| ||||  ||||||| |||||||||| |||||||||||||||    
T  31331419 tttcatccaacttaattacttcactaactacaattaataatgatattttagtaaat 31331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 34057731 - 34057668
Alignment:
Q  233 ttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||| |  ||||||| ||| ||| || |||||||||||||||    
T  34057731 ttattgaatttcatccaacttaactatttcactaactacaaataacaacgatattttagtaaat 34057668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 35505001 - 35504927
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttta 290  Q
    |||||||||||  ||||||||||||||| ||| || ||||||| |||| ||||| ||||||||||  ||||||||    
T  35505001 cactattatactcttatttattgaattttatcgaatttaactattctattaactacaattaataaaaatatttta 35504927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 35732110 - 35732187
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||| |||||||||||||| ||||| ||||||| ||||| | ||||||||| |  |||||||||||||    
T  35732110 tattatactcttatatattgaatttcatctaactttactactccactaattacaattaataggagtattttagtaaat 35732187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 39466168 - 39466087
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaa-cttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| | ||||||||||||||| ||||||  |||||||||  ||||||  | |||||||| |||||||||||||||    
T  39466168 cactattatatccttatttattgaattttatccaattttaactactgcactaaccacgattaataaagatattttagtaaat 39466087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 42972625 - 42972559
Alignment:
Q  232 tttattgaatttcatccaacttaacta---ctctactaactccaattaataaggatattttagtaaa 295  Q
    ||||||||||||||| |||||||||||   ||| |||||||  ||||||||||| ||||||||||||    
T  42972625 tttattgaatttcattcaacttaactacgtctccactaactataattaataagggtattttagtaaa 42972559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 27870856 - 27870931
Alignment:
Q  222 tatacctttatttattgaatttcatccaact-taactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||||||||| |||||| ||| || |||||| |||||||||| |||||||||||| | ||||| |||||    
T  27870856 tatacccttatttattgcatttcaaccatctataactattctactaactacaattaataaggttgttttactaaat 27870931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 21649492 - 21649438
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaact 269  Q
    |||| |||||| | |||||||||||||||||| ||| |||||||||| |||||||    
T  21649492 ccacaattatatcattatttattgaatttcattcaatttaactactcaactaact 21649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 5356602 - 5356650
Alignment:
Q  232 tttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||||||||||||||| || || | ||||| ||||||||||    
T  5356602 tttattgaatttcatccaacttaattattccattaactacaattaataa 5356650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 7672427 - 7672391
Alignment:
Q  260 tctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||  |||||||||||||||||||||||||    
T  7672427 tctactaactataattaataaggatattttagtaaat 7672391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 41091981 - 41092060
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||| |||  ||||||| || | | |||||| |||||||||||  ||||||| |||||    
T  41091981 cactattatacccttatttattgaattacat-aaacttaaatatttttctaactacaattaataagagtattttaataaat 41092060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 40899807 - 40899984
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| || ||||| ||| |||| ||||| |||||||||||||||| |  | ||| || |||||       |||     
T  40899807 tccctccgtctcacaataattgtctctttatcaaattttctttttctcaaaataattgtcactttagaataacattgcagcatttattattattttccat 40899906  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  40899907 tattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaat 40899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 6316001 - 6315824
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    |||| |||||||| |||||| | ||||| ||||| |||| ||| |||| ||||| |||||||||||||||| | || ||  || |||||       |||     
T  6316001 tccccccgtctcacaataatagtctcttaagcattttttctttttctcaaaataattgtcactttagaataccaatgcaacatttattattattttccat 6315902  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||    
T  6315901 tattatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataagggtattttagtaaat 6315824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 6753882 - 6753705
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    |||||||||||| ||||||||| | ||||||||| |||| ||| | || ||||| || ||||||||||||| | || ||  || |||||       |||     
T  6753882 tccctccgtctctaaataattgtcactttagcattttttttttttttcaaaataattatcactttagaataccaatgcaacatttattatctttttccat 6753783  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  6753782 tattatacccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaat 6753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 1248828 - 1248651
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||||||  ||||  || |||| ||||| |||||||||||||||||| || ||  || |||||        ||     
T  1248828 tccctccgtctcataataattgtctctttagcactttttcgttttctcaaaataattgtcactttagaatatcaatgcaacatttattattatttttcat 1248729  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||| ||||||||| || |||||||||||||  ||||||| |||||||||||| |||||||||||||    
T  1248728 tattatacccttattaattgaattttattcaacttaactacttcactaactacaattaataagggtattttagtaaat 1248651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 27542684 - 27542861
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||| |  |||||||||| |||| ||| |||| ||||| |||| |||||||||||   || ||| || |||||       |||     
T  27542684 tccctccgtctcacaataatagtatctttagcattttttctttttctcaaaataattgtgactttagaatactaatgcagcatgtattacttttttccat 27542783  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  27542784 tattatactcttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaat 27542861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 4441008 - 4441087
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||    
T  4441008 actattataccgttatttattgaatttcatccaatttaactactccactaactacaattaataaaaatattttagtaaat 4441087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 296
Target Start/End: Original strand, 8698215 - 8698375
Alignment:
Q  137 attgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn-ccactattatacctttattta 235  Q
    |||| ||||||||||  |||| ||| |||| ||||| ||||||||||| |||||| ||  ||||| |||||        ||||||||||||| |||||||    
T  8698215 attgtctctttagcaatttttctttttctcaaaataattgtcactttacaatatcaatgtagtatttattattttttttccactattatacccttattta 8698314  T
Q  236 ttgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||| | |||| ||||||    
T  8698315 ttgaatttcatccaacttaaccactccactaactacaattaataagggtgttttggtaaat 8698375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 19929849 - 19930012
Alignment:
Q  133 aataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttat 232  Q
    |||||||| || |||| ||| |||| ||| || | ||||| |||||||||||||||| | || ||  || |||||       ||| ||||||||| ||||    
T  19929849 aataattgtctatttaccatcttttctttttcgcaaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttat 19929948  T
Q  233 ttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||||||||| |||||||||||    
T  19929949 ttattgaatttcatccaacttaactatttcactaactacaattaataaggatgttttagtaaat 19930012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 21060619 - 21060696
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  21060619 tattataccattatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaat 21060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 31655038 - 31655119
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||||| ||||||||    
T  31655038 ccactattatacccttatttattgaatttcattcaacataattactccactaactacaattaataaggatattatagtaaat 31655119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 40530352 - 40530271
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| |||||||||||| | |||||||||||    
T  40530352 ccactattatacccttatttatttaatttcatccaacttaaccactccactaactacaattaataagggtgttttagtaaat 40530271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 41496065 - 41496146
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||| ||| ||||| |||||    
T  41496065 ccactattatacctttatttattgcatttcatccaatttaactactccactaactacaattaataatgatgttttactaaat 41496146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 6754021 - 6754095
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  | |||||||||||    
T  6754021 tatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaat 6754095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 4818536 - 4818617
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||||||| |||||||  |||| ||||||| |||||||||||| | |||||||||||    
T  4818536 ccactattatacccttatttattgaatttcatctaacttaatcactccactaactacaattaataagggtgttttagtaaat 4818617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 7828050 - 7827973
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| | ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||    
T  7828050 tattatatccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttaataaat 7827973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 27580589 - 27580666
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| |||||||| | |||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  27580589 tattatacatttatttaattaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaat 27580666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 6616007 - 6615927
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||  ||||||||||||| |||| ||||||    
T  6616007 ccactattatacccttatttattgaatt-catccaacttaaccactccactaactaaaattaataaggatgttttggtaaat 6615927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 22848511 - 22848431
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||| | ||||| |||||||||||| | ||||| |||||    
T  22848511 cactattatacccttatttattgaatttcatccaatctaactactccattaactacaattaataagggtgttttaataaat 22848431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 29374328 - 29374408
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||||| || ||| |||||||||| ||||||| |||||||||| | | |||||||||||    
T  29374328 cactattatacccttatttattgaattttattcaatttaactactccactaactacaattaataaaggtcttttagtaaat 29374408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 38161515 - 38161459
Alignment:
Q  240 atttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  38161515 atttcatccaacttaactactccactaactacgattaataaggatattttagtaaat 38161459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 2232195 - 2232145
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaa 267  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  2232195 actattatacccttatttattgaatttcatccaacttaactactccactaa 2232145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 296
Target Start/End: Complemental strand, 15818703 - 15818529
Alignment:
Q  121 cctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccacta 220  Q
    |||| |||||| ||| |||| ||||||||||| |||||||| |||| |||||  |||||||||| |||| | || ||  ||  ||||       ||||||    
T  15818703 cctcagtctcacaattattgtctctttagcat-ttttatttttctcaaaataactgtcactttacaataccaatgcaacattaattacttgtttccacta 15818605  T
Q  221 ttatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||||||||||| |||||||||||| |||||||||| ||| | | |||||||||| | | |||||||||||    
T  15818604 ttatgcctttatttattaaatttcatccaatttaactactccactgattacaattaataaaggtgttttagtaaat 15818529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 41480137 - 41480179
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaacta 258  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41480137 cactattatacctttatttattgaatttcatccaacttaacta 41480179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 8725133 - 8725056
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||||||||||||||||| ||| |||||||||| ||||||| |||||||||||  | |||||||||||    
T  8725133 tattatactattatttattgaatttcattcaagttaactactccactaactacaattaataagtgtgttttagtaaat 8725056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 11796295 - 11796214
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||||  ||||||||| ||||||||| ||||||||||||  ||||||| ||||||||||  ||||||||||||||    
T  11796295 ccactagtatactcttatttattaaatttcatctaacttaactactacactaactacaattaataataatattttagtaaat 11796214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 41478772 - 41478813
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaacta 258  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41478772 actattatacctttatttattgaatttcatccaacttaacta 41478813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 42803744 - 42803667
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||||||||||||||||||||||||||| |||| | ||||| |||||||||| | | |||||||||||    
T  42803744 tattatactcttatttattgaatttcatccaacttaaccactccattaactacaattaataatggtgttttagtaaat 42803667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 29570378 - 29570442
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||  |||||||||||||||||||||||||||||| || | ||||| ||||||||||    
T  29570378 cactattatactcttatttattgaatttcatccaacttaactattccattaactacaattaataa 29570442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 41478815 - 41478893
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa-ggatattttagtaaat 296  Q
    |||||||||| ||||||||||||||||||| |||||||||| || | ||||| ||||||| || ||||||||||||||||    
T  41478815 ctattatacccttatttattgaatttcatctaacttaacta-tccattaactgcaattaacaagggatattttagtaaat 41478893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 37184203 - 37184126
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||  |||||||||||||||||||| |||||||  | |||| ||||| |||| ||||| |||||||||||||||    
T  37184203 tattatatatttatttattgaatttcatcaaacttaatcagtctattaactacaatgaataaagatattttagtaaat 37184126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 41062280 - 41062207
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| | |||||| ||||| || |||||||||| |||||||||||| | |||||||||||    
T  41062280 atacccttatttattgaactccatccagcttaattattctactaactacaattaataagggtgttttagtaaat 41062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 293
Target Start/End: Complemental strand, 2588287 - 2588111
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| |   |||| ||| |||| ||||| |||||||||||||||||| || ||| || ||||         ||     
T  2588287 tccctccgtctcacaataattgtctctttacctatttttctttttctcaaaataattgtcactttagaatatcaatgcagcatttattttattttttcat 2588188  T
Q  219 tattatacctttatttattgaatttcatccaacttaactact--ctactaactccaattaataaggatattttagta 293  Q
    ||| ||||| |||||||||||| || |||||| |||||||||    ||||||| |||||||||||| | ||||||||    
T  2588187 tataatacccttatttattgaactttatccaatttaactactgcacactaactacaattaataagggtgttttagta 2588111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 41492248 - 41492288
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaacta 258  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  41492248 ctattatatctttatttattgaatttcatccaacttaacta 41492288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 39325847 - 39325902
Alignment:
Q  215 ccactattatacc-tttatttattgaatttcatccaacttaactactctactaact 269  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||||| |||||||    
T  39325847 ccactattatatcatttatttattgaatttaatccaacttaactactccactaact 39325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 41492290 - 41492368
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa-ggatattttagtaaat 296  Q
    |||||||||| ||||||||||||||||||| |||||||||| || | ||||| || |||| || ||||||||||||||||    
T  41492290 ctattatacccttatttattgaatttcatctaacttaacta-tccattaactacatttaacaagggatattttagtaaat 41492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 9515721 - 9515775
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaact 269  Q
    ||||||||||||  ||||||| |||||||||| |||||||||||||| |||||||    
T  9515721 ccactattatactcttatttaatgaatttcattcaacttaactactccactaact 9515775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 32439857 - 32439902
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactact 260  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||    
T  32439857 ccactattatatccctatttattgaatttcatccaacttaactact 32439902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 37101329 - 37101274
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaat 274  Q
    |||||||  |||||||||||||||||||| || |||| ||||||||||||| ||||    
T  37101329 tattatatttttatttattgaatttcatcaaatttaattactctactaactacaat 37101274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 41492149 - 41492219
Alignment:
Q  120 ccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatc 191  Q
    ||||| |||||||||| ||||  ||||||| || |||| |||||||| ||||| ||||||||||||||||||    
T  41492149 ccctctgtctcaaaattattgtatctttagtat-ttttctttgtctcaaaataattgtcactttagaatatc 41492219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 41478596 - 41478666
Alignment:
Q  120 ccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatat 190  Q
    |||||||||||||||| ||||  ||||| | || |||| |||||||| ||||| || ||||||||||||||    
T  41478596 ccctccgtctcaaaattattgtatctttggtattttttctttgtctcaaaataattatcactttagaatat 41478666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 10598262 - 10598214
Alignment:
Q  221 ttatacctttatttattgaatttcatccaacttaactactctactaact 269  Q
    ||||| ||||||||||| ||||| ||||||||||||||||  |||||||    
T  10598262 ttatatctttatttattaaattttatccaacttaactactacactaact 10598214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 18841477 - 18841545
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||| |||| |||| || |  ||||||| |||||||||| | ||||||| |||||    
T  18841477 tttatttattgaatttcacccaatttaattatttcactaactacaattaataacggtattttattaaat 18841545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 26285598 - 26285542
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaata 279  Q
    |||| |||||||||||||||| || |||||||||||||  | ||||| |||||||||    
T  26285598 atacatttatttattgaattttatacaacttaactacttcattaactacaattaata 26285542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 29856056 - 29856108
Alignment:
Q  239 aatttcatccaacttaactactctactaactccaattaataaggatattttag 291  Q
    |||| ||| |||||||||||||| ||||||| |||||||||||  ||||||||    
T  29856056 aattgcattcaacttaactactccactaactacaattaataagagtattttag 29856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 49428573 - 49428397
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| |||||||||||||| ||| || ||  || |||||       |||     
T  49428573 tccctccgtctcacaataattgtctctttaccattttttctttttctcaaaataattgtcactttagaa-atcaatgcaacatttattacttttttccat 49428475  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||    
T  49428474 tattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataagggtattttagtaaat 49428397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 123 - 296
Target Start/End: Complemental strand, 5841657 - 5841482
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatatttta-tttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactat 221  Q
    ||||||||| |||||| | || |||||||| ||||  ||| |||| ||||| |||||||||||||||||| || ||  || |||||       ||| |||    
T  5841657 tccgtctcacaataatagtctttttagcatttttttctttttctcaaaataattgtcactttagaatatcaatgcatcatttattattaatttccattat 5841558  T
Q  222 tatacctttatttattgaatttcatccaactt-aactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||    
T  5841557 tatacctttatttattgaatttcatccaacttaaactactccactaactacaattaataagggtattttagtaaat 5841482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 38405341 - 38405157
Alignment:
Q  113 tattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnn 212  Q
    ||||| ||||||| ||||| ||||||||  | |||| ||| |||| ||| |||| ||||| |||||||||||||||| | || ||  || |||||         
T  38405341 tattactccctccttctcacaataattgtttttttaccattttttctttttctcaaaataattgtcactttagaatagcaatgcaacatttattactttt 38405242  T
Q  213 nn-ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
       ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||||||||||||    
T  38405241 tttccattattatacctttatttattgaatttcatccaacttaactacaccactaactacaattaataagggtattttagtaaat 38405157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 17237432 - 17237351
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  17237432 ccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaggttgttttagtaaat 17237351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 21240932 - 21240759
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||  ||||||| ||  |||||||| |||| |||||  ||||||||||||||||| || ||  || |||         |||     
T  21240932 tccctccgtctcacaataattatctctttaccaatttttatttttctcaaaataaatgtcactttagaatatcaatgcaacatttat----attttccat 21240837  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||    
T  21240836 tattatacccttatttattgaatttcatccaacttaactactcaactaactacaattaataaggatgtgttagtaaat 21240759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 47773251 - 47773074
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| || |||| |   |||| ||| |||| ||||| |||||||||||||||| | || ||| || |||||       |||     
T  47773251 tccctccgtctcacaataattgtctttttacccatttttctttttctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccat 47773152  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||| ||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  47773151 tataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 47773074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 22130032 - 22130109
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||| ||||||    
T  22130032 tattatacctttatttattgaatttcatccaacttaattactccactaactacaattaataaggatgtttttgtaaat 22130109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 49176070 - 49175989
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| |||||||||||| |||||||||||||    
T  49176070 ccactattatacccttatttattgaattttatccaacttaactactccgctaactacaattaataaggttattttagtaaat 49175989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 123 - 296
Target Start/End: Complemental strand, 6643887 - 6643715
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactatt 222  Q
    ||||||||| ||| |||| |||||||||||||||| |||  ||| ||||| ||||||||||| ||| || |  ||| || ||||        ||||||||    
T  6643887 tccgtctcacaattattgtctctttagcatattttcttttcctcaaaataattgtcactttacaatttcaacgcagcatttatt-tatttttccactatt 6643789  T
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| ||||||||||||||||||||||||||||||  | ||||||| |||||||||| ||| |||||||||||    
T  6643788 atacccttatttattgaatttcatccaacttaactataccactaactacaattaataaagatgttttagtaaat 6643715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 33790863 - 33790786
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||| ||||    
T  33790863 tattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagcaaat 33790786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 36985771 - 36985852
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||||||| ||||||||||||||||||||||||||| || |||||||||| ||||||||| || |||||||||||||    
T  36985771 ccaccattatacccttatttattgaatttcatccaacttaattattctactaactacaattaatacgggtattttagtaaat 36985852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 47464501 - 47464420
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||  | |||||||||||    
T  47464501 ccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataagagttttttagtaaat 47464420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 16821466 - 16821386
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||| |||||||  |||||||||||||||| ||||||||    
T  16821466 cactattatacccttatttattgaatttcattcaacttaaatactccactaactataattaataaggatattatagtaaat 16821386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 281
Target Start/End: Complemental strand, 35311456 - 35311293
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn--cc 216  Q
    ||||||||||||| ||| |||| ||||||||||| |||| ||| |||| ||||| ||||||||||| |||| | || ||  || |||||         ||    
T  35311456 tccctccgtctcacaattattgtctctttagcatgtttttttt-tctcaaaataattgtcactttacaataccaatgcaacatttattattattttttcc 35311358  T
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    | ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  35311357 aatattatacctttatttattgaatttcatccaacttaattactccactaactacaattaataag 35311293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 52247559 - 52247483
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||  ||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  52247559 attatacacttatttaatgaatttcattcaacttaactactccactaactacaattaataaggatattttagtaaat 52247483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 11907796 - 11907654
Alignment:
Q  154 ttttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaactt 253  Q
    |||| ||| |||| ||||| |||||||||||||||| | || ||| || |||||       ||| ||| |||| ||||||||||||| ||||||||||||    
T  11907796 ttttctttttctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacatttatttattgaacttcatccaactt 11907697  T
Q  254 aactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| | ||||| |||||||||||| | |||||||||||    
T  11907696 aactactccaataactacaattaataagggtgttttagtaaat 11907654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 30682328 - 30682251
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| | ||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||| ||||||||    
T  30682328 tattatgcttttatttattgaatttcattcaaattaactactctactaactacaactaataaggatattatagtaaat 30682251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 34360640 - 34360721
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||| ||||||| |||||||||||  | |||||||||||    
T  34360640 ccactattatacccttatttattgaattttattcaacttaactactccactaactacaattaataagagtgttttagtaaat 34360721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 35380465 - 35380388
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||||||||||||||||||||||||||| |||| ||||||| |||||||||| ||| |||||||||||    
T  35380465 tattatactcttatttattgaatttcatccaacttaaccactccactaactacaattaataatgatgttttagtaaat 35380388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 49746950 - 49747027
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||| | | |||||||||||||    
T  49746950 tattatacccttatttattgaatttcatccaacttaactactcaactaactataattaatgaaggtattttagtaaat 49747027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 7061799 - 7061719
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||||||| |||||||| || || ||||||| |||||||||| |||||| ||||||||    
T  7061799 cactattatacccttatttattgaatttcattcaacttaattaatccactaactacaattaataaagatattatagtaaat 7061719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 296
Target Start/End: Complemental strand, 26147846 - 26147670
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatatt--annnnnnnccacta 220  Q
    ||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| |||||||||||||||| | || ||  || ||||  |       ||| ||    
T  26147846 tccgtctcacaataattgtctctttatcattttttctttttctcaaaataattgtcactttagaataccaatacaacatttattttatttttttccatta 26147747  T
Q  221 ttatacctttatttattgaat-ttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| ||||||||||||  |||||||||||||| ||||| ||||||| ||||||||||| || |||||||||||    
T  26147746 ttatacccttatttattgaaaattcatccaacttaattactccactaactacaattaataagaatgttttagtaaat 26147670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 43237229 - 43237309
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||  ||||||||||||||||||||||||||||||||  |||||||  ||||||||| ||| |||||||||||    
T  43237229 cactattatacacttatttattgaatttcatccaacttaactacttcactaactataattaataatgattttttagtaaat 43237309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 53412094 - 53412174
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || || ||||  |||||||||  ||||||||||||||    
T  53412094 cactattatacttttatttattgaatttcatccaacttaactattccacaaactataattaataaaaatattttagtaaat 53412174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 18741596 - 18741529
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||| |||||    
T  18741596 ttatttattgaatttcatccaacttaactactccattaactacaattaataaagatattttaataaat 18741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 32884786 - 32884852
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  32884786 ccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataag 32884852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 52859916 - 52859854
Alignment:
Q  234 tattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  52859916 tattgaatttcattcaacttaactactccactaactacaattaataaggatgttttagtaaat 52859854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 461947 - 462024
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||| |||||||| || ||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  461947 tattatacccttatttgttgaattttattcaacttaactactccgctaattacaattaataaggatattttagtaaat 462024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 2066778 - 2066855
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||||| | ||||| |||||    
T  2066778 tattatacctttatttattgaatttcatctaacttaactaccccactaactaaaattaataagggtgttttaataaat 2066855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 17114433 - 17114506
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||| ||| ||||| |||||||||| ||||||| |||||||||||| | |||||||||||    
T  17114433 atacctttatttattgaacttcctccaaattaactactccactaactacaattaataagggtgttttagtaaat 17114506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 51624771 - 51624836
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  51624771 ccactatcatacccttatttattgaatttcatccaacttaactactccactaactacaaataataa 51624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 11288752 - 11288685
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||| ||||||||||||||||| || |||| |||||||||| |||||||||||||||    
T  11288752 tttatttattgaattttatccaacttaactactccaccaactacaattaataa-gatattttagtaaat 11288685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 25142501 - 25142437
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    |||||||||||||||||||||||||||||||   ||||||| |||| ||||||||||||||||||    
T  25142501 ttatttattgaatttcatccaacttaactacatcactaactgcaatcaataaggatattttagta 25142437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 35998798 - 35998877
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| |  |||| |||||||||| ||||||||| |||||    
T  35998798 cactattatatctttatttattgaatt-catccaacttaactactccatcaactacaattaataatgatattttaataaat 35998877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 42617134 - 42616958
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| ||||||||  || ||| ||| |||| ||| |||| ||||| ||||||||||||||||   || ||  || |||||       |||     
T  42617134 tccctccgtctcacaataattgtttcattaacat-ttttctttttctcaaaataattgtcactttagaatacaaatgcaacatttattattattttccat 42617036  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||||||||||||||||| | |||||||||||| ||| ||| ||||||||||  ||||||||||||||    
T  42617035 tattatacacttatttattgaatttcattcgacttaactactccacttactacaattaataaaaatattttagtaaat 42616958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 2653358 - 2653486
Alignment:
Q  168 aaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaacttaactactctactaa 267  Q
    ||||| |||||||||||||||||| || ||  || |||||       ||| ||||||||||||||||||| |||||||||||| ||||||||||   |||    
T  2653358 aaatagttgtcactttagaatatcaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactcctttaa 2653457  T
Q  268 ctccaattaataaggatattttagtaaat 296  Q
    || |||||||||||  ||||||| |||||    
T  2653458 ctacaattaataagagtattttaataaat 2653486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 53346746 - 53346825
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||   |||||||||||||||||| ||||||||||||| |||||||  ||||||||||| | |||||||||||    
T  53346746 actattatactcatatttattgaatttcatcaaacttaactactccactaactaaaattaataagggtgttttagtaaat 53346825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 2942780 - 2942700
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||| ||||||||| ||||| ||||||||| |||| ||||||| |||||||||||| | |||||||||||    
T  2942780 ccactattatatctttgtttattgaaattcattcaacttaaccactccactaactacaattaataagg-tgttttagtaaat 2942700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 19265797 - 19265874
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| ||| ||| |||||||||||||| |||||||||||||| |||||||  ||||||||||| ||||||| |||||    
T  19265797 tattacacccttaattattgaatttcattcaacttaactactccactaactataattaataaggttattttaataaat 19265874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 44536331 - 44536251
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||| |||||||||||| |||||| |||||| ||||||| |||||||||||| | ||||| |||||    
T  44536331 ccactattatacccttattt-ttgaatttcatctaacttagctactccactaactacaattaataagggtgttttaataaat 44536251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 50264212 - 50264135
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||| |||||||| || |  ||||||| |||||||||||  |||||||||||||    
T  50264212 tattatacccttatttattgaatttcattcaacttaaatatttcactaactacaattaataagagtattttagtaaat 50264135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 43902237 - 43902317
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| || |||||||||||||||||| |||||||| ||||| |||||||   ||||||||| |||||||| |||||    
T  43902237 cactattatgcccttatttattgaatttcatgcaacttaattactccactaactatgattaataagaatattttaataaat 43902317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 44526377 - 44526445
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| ||||||||||||||| |||| || ||||||| |||||||||||||| ||||| |||||    
T  44526377 tttatttattaaatttcatccaacttcactattccactaactacaattaataaggatgttttaataaat 44526445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 7986962 - 7987037
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    ||||||||| |||||||||| ||||||||  ||||||||||||||||||||   |||||||||  |||||||||||    
T  7986962 ctattatacttttatttatttaatttcattaaacttaactactctactaacaataattaataataatattttagta 7987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 31370432 - 31370373
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaat 278  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||||||  |||||||    
T  31370432 tattatacatttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 54506787 - 54506854
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| ||||||||||||| ||||||||||||| ||||||| ||||| |||| ||||||||| |||||    
T  54506787 ttattaattgaatttcatcaaacttaactactccactaactacaattgataatgatattttaataaat 54506854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 6609750 - 6609827
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||| ||||||||||||||||||||| | ||| | |||||||||| ||| |||| ||||||    
T  6609750 tattatactcttatttattgagtttcatccaacttaactactccaataattacaattaataaagatgtttttgtaaat 6609827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 38663583 - 38663502
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| ||||  |||||||| |||||||||||||||||||||| |||||||| | ||||||||   | |||||||||||    
T  38663583 ccactattgtacccatatttattaaatttcatccaacttaactactttactaactacgattaataaaagtgttttagtaaat 38663502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 39397333 - 39397410
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||| |||||||||||  ||||||| |||| ||||| ||||||||| ||  ||||||||||||    
T  39397333 tattatacccttatttattaaatttcatccattttaactaatctagtaactacaattaatatggggattttagtaaat 39397410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 40122990 - 40122909
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| ||| |||| |||||||||||||||| || ||||||||| ||| ||||||| |||| ||||||| | |||||||||||    
T  40122990 ccaccattgtacccttatttattgaatttcgtcgaacttaactgctccactaactacaatcaataagggtgttttagtaaat 40122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 48914278 - 48914206
Alignment:
Q  221 ttatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    ||||||| | ||||||||||||||||  ||||||| ||||  ||||||| ||| |||||||||||||||||||    
T  48914278 ttataccctaatttattgaatttcattaaacttaattacttcactaactacaaataataaggatattttagta 48914206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 3689551 - 3689628
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||| ||| ||||||||| |||||||| |||| |||||||  ||||||||||  | |||||||||||    
T  3689551 tattatacccttattaatttaatttcatctaacttaacaactcaactaactataattaataagagtgttttagtaaat 3689628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 47359085 - 47359020
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||  ||| |||||||||||||||||| |||||||| ||||| ||| ||| ||||||||||    
T  47359085 ccactattgcacccttatttattgaatttcattcaacttaattactccactgactacaattaataa 47359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 25233178 - 25233230
Alignment:
Q  227 ctttatttattgaatttcatccaacttaactactctactaactccaattaata 279  Q
    |||||||||||||| |||||||||||||||||||  |||||||  ||||||||    
T  25233178 ctttatttattgaacttcatccaacttaactacttcactaactataattaata 25233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 28501015 - 28500946
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||||||        ||||||| |||||||||||| |||||||||||||    
T  28501015 tattatacccttatttattgaatttcatcaaactta--------actaactgcaattaataagggtattttagtaaat 28500946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 30261003 - 30261055
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    |||||||||||||||||  | |||||||||||||||||| | |||||||||||    
T  30261003 ttatttattgaatttcactctacttaactactctactaattacaattaataag 30261055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 41711685 - 41711618
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatat 190  Q
    |||||||||||||||||| || ||||| || |||||||| |||| ||||| ||||||  |||||||||    
T  41711685 tccgtctcaaaataattgtctatttagtattttttatttttctcaaaataattgtcatattagaatat 41711618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 10672643 - 10672681
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaacta 258  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  10672643 attatactcttatttattgaatttcatccaacttaacta 10672681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 10886283 - 10886321
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaacta 258  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  10886283 attatactcttatttattgaatttcatccaacttaacta 10886321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 42517773 - 42517693
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactct---actaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||| ||||| |||| | |   |||||||  ||||||||||| |||||||||||||    
T  42517773 tattatactgttatttattgaatttcatctaactttactagtatttcactaactataattaataagggtattttagtaaat 42517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 27880363 - 27880330
Alignment:
Q  219 tattatacctttatttattgaatttcatccaact 252  Q
    ||||||||||||||||||| ||||||||||||||    
T  27880363 tattatacctttatttattaaatttcatccaact 27880330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 43967656 - 43967611
Alignment:
Q  230 tatttattgaatttcatccaacttaactactctactaactccaatt 275  Q
    |||||||||||||||||| |||||||||| |||||| ||| |||||    
T  43967656 tatttattgaatttcatcaaacttaactattctactgactacaatt 43967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 30192227 - 30192271
Alignment:
Q  252 ttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| ||||||||||||| ||||||||||| ||||||||| ||||    
T  30192227 ttaattactctactaactacaattaataagaatattttagcaaat 30192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 35251888 - 35251936
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaa 267  Q
    ||||||| | ||||||||||||||||||| ||||||| ||||| |||||    
T  35251888 tattatatccttatttattgaatttcatctaacttaattactccactaa 35251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 46397003 - 46396963
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactac 259  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  46397003 tattatacccttatttaatgaattttatccaacttaactac 46396963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 14523596 - 14523419
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| |||||||| ||||||| ||  |||| ||| |||| ||||| |||||||||||||||||| || ||  || |||||       |||     
T  14523596 tccctccgtctcataataattgtctctttaacactttttctttttctcaaaataattgtcactttagaatatcaatgcaacatttattattattttccat 14523497  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| | ||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14523496 tattatatccttattaattgaatttcatctaacttaactactccactaactacaattaataaggatattttagtaaat 14523419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 296
Target Start/End: Original strand, 17695222 - 17695396
Alignment:
Q  125 cgtctcaaaataattgactctttagcatatttta-tttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn--ccactat 221  Q
    ||||||| |||||| | ||||||| ||| ||||  ||| |||| ||||| |||||||||||||||||| || ||| || |||||         |||||||    
T  17695222 cgtctcacaataatagtctctttaccatttttttctttttctcaaaataattgtcactttagaatatcaatgcagcatttattattattttttccactat 17695321  T
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||    
T  17695322 tatacccttatttattgaatttcatccaacttaactactctactaactataattaataagaatatttttgtaaat 17695396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 133 - 281
Target Start/End: Complemental strand, 36354652 - 36354505
Alignment:
Q  133 aataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttat 232  Q
    |||||||| ||||||| ||| |||| ||| |||| ||||| |||||||||||||||| | || ||| || |||||       ||| ||||||||| ||||    
T  36354652 aataattgtctctttatcattttttctttttctcaaaataattgtcactttagaataccaatgcagaatttattatttttt-ccattattataccattat 36354554  T
Q  233 ttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  36354553 ttattgaatttcatccaacttaactactccactaactacaattaataag 36354505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 8947176 - 8947099
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||||    
T  8947176 tattatacccttatttattgaatttcatccaacttaactactccactaactataattaataaggatgttttagtaaat 8947099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 35242424 - 35242344
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||| ||||||||    
T  35242424 cactattatacttttatttattgaatttcatccaacttaactactcaactaactacaattaataaatatattctagtaaat 35242344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 5789776 - 5789695
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| |||||||||||| | |||||||||||    
T  5789776 ccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaat 5789695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 37322417 - 37322494
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||| |||||    
T  37322417 tattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtattttaataaat 37322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 3323496 - 3323335
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||| ||||||| ||| |||| ||||||||||| |||| ||| |||| ||||| || |||||||| |||| | || ||| || |||||       ||||    
T  3323496 tcccttcgtctcataattattgtctctttagcattttttctttttctcaaaataattctcactttacaataccaatgcagcatttattattttttcccac 3323397  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||| ||  ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  3323396 tattacactcttacttattgaatttcatccaacttaactactccactaactacaattaataa 3323335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 35313779 - 35313939
Alignment:
Q  122 ctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactat 221  Q
    |||||||||| ||| |||| ||||||| ||| |||| ||| |||| ||||| ||||||||||| ||||   || ||  || |||||       |||||||    
T  35313779 ctccgtctcacaattattgtctctttaacattttttctttttctcaaaataattgtcactttacaataataatgcaacatttattacttttttccactat 35313878  T
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    |||||  ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  35313879 tatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataagg 35313939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 15359207 - 15359134
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  15359207 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaat 15359134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 39691479 - 39691556
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||| |||||| ||||||| ||||||| |||||||||||  |||||||||||||    
T  39691479 tattatacccttatttattgaatttcattcaactttactactccactaactgcaattaataagagtattttagtaaat 39691556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 43410427 - 43410492
Alignment:
Q  231 atttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  43410427 atttattgaatttcattcaacttaactactccattaactacaattaataaggatattttagtaaat 43410492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 7495060 - 7494920
Alignment:
Q  122 ctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnc-cacta 220  Q
    |||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| |||||||||||||||| | || ||| || |||||         || ||    
T  7495060 ctccgtctcacaataattgtctctttaccatcttttctttttctcaaaataattgtcactttagaataccaatgcagcatttattatttttttttcatta 7494961  T
Q  221 ttatacctttatttattgaatttcatccaacttaactactc 261  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  7494960 ttatacccttatttattgaatttcatccaacttaactactc 7494920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 16377787 - 16377703
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaac----ttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||||||||||||||||||    |||||||||| ||||||| |||||||||||| |||||| ||||||    
T  16377787 cactattatacttttatttattgaatttcatccaacttaattaactactccactaactacaattaataaggttattttggtaaat 16377703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 296
Target Start/End: Complemental strand, 34120639 - 34120486
Alignment:
Q  141 actctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaa 240  Q
    |||||||| ||| |||| ||| |||| ||||| ||||||||||| |||| | || ||| || |||||       ||| ||||||||  ||| ||||||||    
T  34120639 actctttaccatcttttctttttctcaaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactcttacttattgaa 34120540  T
Q  241 tttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||| || ||||||| ||||||||||  ||||||||||||||    
T  34120539 tttcatccaacttaactattccactaactacaattaataa--atattttagtaaat 34120486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 9458454 - 9458327
Alignment:
Q  154 ttttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaatttcatccaactt 253  Q
    |||||||| |||| ||||| |||||||||||||||| | || ||| || |||||       ||| ||||||||| ||||||||| |||||||||||||||    
T  9458454 ttttatttttctcaaaataattgtcactttagaataccaatgcagcatttattatttttt-ccattattatacccttatttattaaatttcatccaactt 9458356  T
Q  254 aactactctactaactccaattaataagg 282  Q
     ||||||| ||||||| ||||||||||||    
T  9458355 tactactccactaactacaattaataagg 9458327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 281
Target Start/End: Original strand, 19937374 - 19937436
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||    
T  19937374 tattatacctttatttattgaattttattcaacttaactactccactaactacaattaataag 19937436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 296
Target Start/End: Original strand, 16463582 - 16463755
Alignment:
Q  125 cgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn--ccactatt 222  Q
    ||||||| |||||||| ||||||| |   |||||||| |||| ||||| |||||||||||||||| | || ||| || |||||         ||| ||||    
T  16463582 cgtctcagaataattgtctctttacccatttttatttttctcaaaataattgtcactttagaataccaatgcagcatttattattattttttccattatt 16463681  T
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
     |||| ||||||||| ||||||||| ||||| ||||||| ||||||| |||||||||||| | |||||||||||    
T  16463682 ttaccattatttattaaatttcatcaaactttactactccactaactacaattaataagggtgttttagtaaat 16463755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 17346478 - 17346409
Alignment:
Q  227 ctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||  |||||||| |||||    
T  17346478 ctttatttattgaatttcttccaacttaactactccactaactacaattaataaaaatattttaataaat 17346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 25637369 - 25637547
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn-cca 217  Q
    ||||| ||||||| |||||||| ||||||| ||| |||  ||| |||| ||||| |||||||||||||||| | || ||| || |||||        |||    
T  25637369 tcccttcgtctcacaataattgtctctttaccatttttactttttctcaaaataattgtcactttagaataccaatgcagcatttattattttttttcca 25637468  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
     ||||| ||| ||||||||| |||||||||||||||||||||||   ||||| |||||||||| | | |||||||||||    
T  25637469 ttattacacccttatttattaaatttcatccaacttaactactcctataactacaattaataaaggtgttttagtaaat 25637547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 26863486 - 26863421
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||| ||||||| ||||||||||    
T  26863486 ccactattatacatttatttaatgaatttcatccgacttaactactccactaactacaattaataa 26863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 28186199 - 28186280
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||   ||||||||||||||||||| ||||||||||||||| ||||||  ||| ||||||||||||||| |||||    
T  28186199 ccactattatttttttatttattgaatttcattcaacttaactactctgctaactaaaatgaataaggatattttaataaat 28186280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 34451562 - 34451382
Alignment:
Q  113 tattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnn 212  Q
    ||||| ||||||| |||||||||||||| |||||||| || |||| | | |||| ||||| |||||||||||||||||| || ||  ||   |||         
T  34451562 tattactccctccatctcaaaataattgtctctttagtattttttttctatctcaaaataattgtcactttagaatatcaatgcaacat---ttaatttt 34451466  T
Q  213 nnccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
      ||| |||||| ||||||||||||||||||||||||||| ||||| |  | |||||  ||||||| |  ||||||||||||||    
T  34451465 tcccagtattatgcctttatttattgaatttcatccaactaaactatttcaataactagaattaatgaaaatattttagtaaat 34451382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 16805880 - 16805947
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||| ||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  16805880 ttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaat 16805947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 16845161 - 16845228
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||| ||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  16845161 ttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaat 16845228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 34225579 - 34225656
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||| |||||||| |||||||| ||||| | ||||| |||||||||||| | |||||||||||    
T  34225579 tattatacccttatttattaaatttcattcaacttaaatactccattaactacaattaataagggtgttttagtaaat 34225656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 39785578 - 39785651
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||||||||||||||||| | ||||| |||||||||||  | |||||||||||    
T  39785578 atacccttatttattgaacttcatccaacttaactactccattaactacaattaataagagtgttttagtaaat 39785651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 43115926 - 43115849
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||  ||||||||||| |||||||||||||| ||||||| |||| ||||||  |||||||||||||    
T  43115926 tattataccattattcgttgaatttcattcaacttaactactccactaactacaataaataagagtattttagtaaat 43115849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 31448812 - 31448740
Alignment:
Q  224 tacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| |||||||||||||||||||||||||||||| |  ||||||| |||||| ||||| | |||||||||||    
T  31448812 tacccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaagggtgttttagtaaat 31448740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 36794277 - 36794349
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||| || |||||||||   ||||||||||    
T  36794277 atacccttatttattgaacttcatccaacttaactactccactaactacagttaataagggcgttttagtaaa 36794349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 5272263 - 5272204
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaat 278  Q
    ||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  5272263 tattatacccttatttattgaatttcatccaatttaattactccactaactacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 18853315 - 18853248
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||| |||||||  |||||| ||||||    
T  18853315 ttatttattgaatttcatccaaattaattactctactaactacaactaataagagtattttggtaaat 18853248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 7438980 - 7438934
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactc 261  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  7438980 ccactattatacccttatttattgaatttcattcaacttaactactc 7438934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 19426442 - 19426521
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| || |||||  || || ||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  19426442 ccactattataccgttgtttat--aactttatccaacttaactactcgacttactacaattaataatgatattttagtaaat 19426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 32831296 - 32831222
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||||||||||||||||||  | |||||||||| | ||||| |||||||||| ||| |||||||||||    
T  32831296 tataccattatttattgaatttcatctcatttaactactccaataactacaattaataaagatgttttagtaaat 32831222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 11742648 - 11742575
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||| ||||||||||||| | ||||| |||||||||||| | ||||| |||||    
T  11742648 atacccttatttattgaacttcatcaaacttaactactccattaactacaattaataagggtgttttaataaat 11742575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 39329791 - 39329711
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| || | |||||||||||||||||||||| |||||||||| | ||||| |||||||||||  | |||||||||||    
T  39329791 ccactattgtatcgttatttattgaatttcatccaatttaactactcca-taactacaattaataagagtgttttagtaaat 39329711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 43730603 - 43730667
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    |||| ||||| |||||||||||||||||| || |||||||||||||| ||||| ||||||||||||    
T  43730603 actaatatacttttatttattgaatttca-cctacttaactactctagtaactacaattaataagg 43730667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 16807758 - 16807837
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaa 294  Q
    |||||| |||| ||||||||||||||||||||| |||| ||| |||||| ||||| | |||||||||  || ||||||||    
T  16807758 ccactaatatatctttatttattgaatttcatctaactcaacaactctattaactactattaataagattagtttagtaa 16807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 16847039 - 16847118
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaa 294  Q
    |||||| |||| ||||||||||||||||||||| |||| ||| |||||| ||||| | |||||||||  || ||||||||    
T  16847039 ccactaatatatctttatttattgaatttcatctaactcaacaactctattaactactattaataagattagtttagtaa 16847118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 45235580 - 45235647
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||| |||||||||| |  | ||||| |||||||||||| | |||||||||||    
T  45235580 ttatttattgaatttcatcaaacttaactatttcattaactacaattaataagggtgttttagtaaat 45235647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 34120745 - 34120675
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaata 189  Q
    ||||||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| ||||||||||| ||||    
T  34120745 tccctccgtctcacaataattgcctctttaccatcttttctttttctcaaaataattgtcactttaaaata 34120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 19444135 - 19444212
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| || ||||||||| || ||||| ||||||||||| ||||| | ||||||||||  | ||||||||||||    
T  19444135 tattatacccttgtttattgaaatttatccatcttaactactcgactaattacaattaataataacattttagtaaat 19444212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 26608267 - 26608190
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||| | | |||||| ||||||||||| || |||||||  ||||||||||  |||||||||||||    
T  26608267 tattatacccttatttaattattttcattcaacttaactaatccactaactataattaataagagtattttagtaaat 26608190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 28170710 - 28170646
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||  |||||||| ||||||||||||| |||| || |||| ||||| ||||||||||    
T  28170710 cactattatactcttatttatagaatttcatccaatttaattattctattaactacaattaataa 28170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 43699723 - 43699672
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaa 267  Q
    |||||||||||| || |||||||||||| ||||||||||| ||||| |||||    
T  43699723 cactattatacccttgtttattgaattttatccaacttaattactccactaa 43699672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 45464009 - 45464052
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactact 260  Q
    |||||||||| |||||||||||||||||||| || |||||||||    
T  45464009 actattatacttttatttattgaatttcatctaatttaactact 45464052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 3601357 - 3601419
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcact 181  Q
    ||||||||||||| ||| |||| ||||||||||| |||| ||| |||| ||||| ||||||||    
T  3601357 tccctccgtctcacaattattgtctctttagcattttttctttttctcaaaataattgtcact 3601419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 16028301 - 16028351
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctacta 266  Q
    ||||||||||| ||||||||||||||||||  | ||||||||||| |||||    
T  16028301 cactattatacatttatttattgaatttcactccacttaactactttacta 16028351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 17122973 - 17123043
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttt 289  Q
    ||||||||  ||||||||||||||||||| ||  |||| |||| ||||| | |||||||||| ||||||||    
T  17122973 tattatactcttatttattgaatttcatctaatctaacaactcaactaattacaattaataatgatatttt 17123043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 18202098 - 18202144
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaact 269  Q
    |||| |||||||||| ||||||||||||||||||||||  |||||||    
T  18202098 atacatttatttattaaatttcatccaacttaactacttcactaact 18202144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 259
Target Start/End: Complemental strand, 1206804 - 1206775
Alignment:
Q  230 tatttattgaatttcatccaacttaactac 259  Q
    ||||||||||||||||||||||||||||||    
T  1206804 tatttattgaatttcatccaacttaactac 1206775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 25904773 - 25904813
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaa 255  Q
    ||||||||||||| | |||||||||||||||| ||||||||    
T  25904773 ccactattataccctaatttattgaatttcattcaacttaa 25904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 43730430 - 43730481
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||||||||| || |||||||||||||| ||| | ||||||||||    
T  43730430 tttatttattgaatttca-ccgacttaactactctagtaaatacaattaataa 43730481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 296
Target Start/End: Complemental strand, 32440879 - 32440693
Alignment:
Q  112 ttattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaa--tatccattcagtatatattann 209  Q
    |||||| ||||||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| ||||||||||||||  |||| || ||| || |||||      
T  32440879 ttattactccctccgtctcacaataattgtctctttaccattttttctttttctcaaaataattgtcactttagaaaatatcaatgcagcatttattatt 32440780  T
Q  210 nnnnnccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
         ||| |||| ||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||| | |||||||||||    
T  32440779 attttccattattgtacctttatttattacatttcatccaacttaactactctactaattacaattaataagggtgttttagtaaat 32440693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 11656172 - 11655994
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnncc-a 217  Q
    ||||||||||||| ||||||||  |||||| |   |||||||| |||| ||||| |||||||||||||||||| || ||| || |||||       || |    
T  11656172 tccctccgtctcacaataattgtttctttacccatttttatttttctcaaaataattgtcactttagaatatcaatgcagcatttattatttttttccca 11656073  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
     ||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| | |||||||||||    
T  11656072 ttattatacccttatttattgaatttcatccaactttactactccactaactacaattaataagggtgttttagtaaat 11655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 29363193 - 29363372
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn--cc 216  Q
    ||||||||||||| |||||||| ||||||| ||| |||| ||| |||| ||||| ||||||||| |||||| | || ||| || |||||         ||    
T  29363193 tccctccgtctcacaataattgtctctttaccatcttttctttttctcaaaataattgtcacttcagaataccaatgcagcatttattattattttttcc 29363292  T
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    | ||||||||  |||||||||||||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||||    
T  29363293 attattatactcttatttattgaatttcatccaacttaactaatccgctaactacaattaataaggatgttttagtaaat 29363372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 181542 - 181622
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||| ||| |||||||||||    
T  181542 cactattatacccttatttattgaatttcatccaacttaactactccactaactataattaataatgatgttttagtaaat 181622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 15058104 - 15058183
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||    
T  15058104 actattatacccttatttattgaatttcatccaacttaaatacttcactaactacaattaataagggtattttagtaaat 15058183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 24983578 - 24983497
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  24983578 ccactaatatacccttatttattgaatttcacccaacttaactactccactaactacaattaataagggtgttttagtaaat 24983497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 34657691 - 34657626
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  34657691 ccactattatacatttatttattgaatttcatccaacttaactactccactaactacaattaataa 34657626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 31894338 - 31894258
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||  ||||||| |||||||||| ||  |||||||||||    
T  31894338 cactattatacccttatttattaaatttcatccaacttaactacttcactaactacaattaataatgacgttttagtaaat 31894258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 1781789 - 1781868
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| |||||||||||| | |||||||||||    
T  1781789 ccactattataccttt-tttattgaatttcattcaacttaac-actccactaactacaattaataagggtgttttagtaaat 1781868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 13909413 - 13909490
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||| ||||||||| ||||||| ||||| ||||||| |||||||||||| |||||||||||||    
T  13909413 tattatactcttatttattcaatttcatctaacttaattactccactaactacaattaataagggtattttagtaaat 13909490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 34299980 - 34300061
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||| | |||||||||||||  |||||||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  34299980 ccactaatatatccttatttattgaataccatccaacttaactacttcactaaccacaattaataaggatattttagtaaat 34300061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 7920225 - 7920304
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||||||| ||| |||| ||||  ||||||| |||||||||| |||||||||||||||    
T  7920225 cactattataccattatttattgaatttcattcaaattaaatacttcactaactacaattaataa-gatattttagtaaat 7920304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 3291883 - 3291816
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||| ||||||||||||||||  ||||||| |||||||||| | |||||||||||||    
T  3291883 ttatttattgaattttatccaacttaactacttcactaactacaattaataaaggtattttagtaaat 3291816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 13087529 - 13087596
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||||||||| ||||  |||||||  ||||||||||||| |||||||||||    
T  13087529 ttatttattgaatttcatccaacttaattacttcactaactataattaataaggatgttttagtaaat 13087596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 5302351 - 5302417
Alignment:
Q  230 tatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||||||||||||||||||| | ||||| |||||||||||||| |||| ||||||    
T  5302351 tatttattgaacttcatccaacttaactactccattaactacaattaataaggatgttttggtaaat 5302417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 4367378 - 4367301
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| || ||||||||| |||||||| |||||||||||||  ||||||| || |||||||||||||||||| ||||    
T  4367378 tattattcccttatttattaaatttcatgcaacttaactacttcactaactacagttaataaggatattttagaaaat 4367301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 6801924 - 6801997
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||| ||| |||||||||||||||||||| ||||||| ||||||||||||   |||||||||||    
T  6801924 atacccttatttatcgaacttcatccaacttaactactccactaactacaattaataagggcgttttagtaaat 6801997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 15046111 - 15046171
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaat 278  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  15046111 actattatacccttatttattgaatttcatccaac-taactactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 33510129 - 33510206
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||| | ||||||||||||||||||||||| | ||| | ||||||||||  ||||||||||||||    
T  33510129 tattatacccttatttaataaatttcatccaacttaactactcaattaattacaattaataaaaatattttagtaaat 33510206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 281
Target Start/End: Complemental strand, 3720472 - 3720304
Alignment:
Q  113 tattagtccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnn 212  Q
    ||||| ||||||||||||| ||| |||| ||||||| ||| |||| ||| |||| ||||| |||||| |||| |||  | || ||  || ||||          
T  3720472 tattactccctccgtctcacaattattgtctctttatcattttttctttttctcaaaataattgtcaatttacaatgccaatgcatcatttatttttccc 3720373  T
Q  213 nnccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
      ||||||||||||  ||||||| |||||||||| ||||||||||| || ||||||| |||||||||||    
T  3720372 ccccactattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataag 3720304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 17828939 - 17829006
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| ||| ||||||||||||||||| ||||  ||||||| |||||||||| |||||||||||||||    
T  17828939 ttattaattaaatttcatccaacttaattacttcactaactacaattaataaagatattttagtaaat 17829006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 30716899 - 30716966
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||| | ||| |||||||    
T  30716899 ttatttattgaattttatccaactttactactccactaactacaattaataagggtgtttaagtaaat 30716966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 21010060 - 21010243
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn--cc 216  Q
    ||||||||||||| |||||||| || |||| ||| |||| ||| |||| ||||| ||||||||||| |||| | || ||| || ||| |         ||    
T  21010060 tccctccgtctcataataattgtctttttaccattttttctttttctcaaaataattgtcactttataataccaatgcagcatttataatttttttttcc 21010159  T
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaa----ctccaattaataaggatattttagtaaat 296  Q
    | ||||||||  ||||||||||||||||||||||||||||||||| |||||    || ||||| |||||| | |||||||||||    
T  21010160 attattatactgttatttattgaatttcatccaacttaactactccactaattaactacaatttataagggtgttttagtaaat 21010243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 1225037 - 1225113
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||  |||||||  |||||||||| ||||||||||||||    
T  1225037 tattatacccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataagaatattttagtaaat 1225113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 11143708 - 11143635
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||||||||||||||||  |||||||  ||||||||||| |  ||||||||||    
T  11143708 atacccttatttattgaacttcatccaacttaactacttcactaactataattaataagggtgatttagtaaat 11143635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 23142657 - 23142733
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||  |||||||||||||||| | ||||||||||| |||| || |||||||||||| | |||||||||||    
T  23142657 tattataccttc-tttattgaatttcatctagcttaactactccactacctacaattaataagggtgttttagtaaat 23142733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 16205273 - 16205207
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||| ||||||| || || ||||||| |||||||||| |||||||||||||||    
T  16205273 ttatttattgagtttcatctaacttaaatattccactaactacaattaataa-gatattttagtaaat 16205207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 21425686 - 21425641
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactact 260  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||    
T  21425686 ccaccattatatccttatttattgaatttcatccaacttaactact 21425641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 22398411 - 22398464
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataag 281  Q
    |||||||||||||||||||| ||||||||||||  | ||||| |||||||||||    
T  22398411 tttatttattgaatttcatctaacttaactacttcaataactacaattaataag 22398464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 28106058 - 28106013
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactact 260  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||    
T  28106058 ccactattatatcattatttattgaatttcattcaacttaactact 28106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 1063727 - 1063651
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| ||| ||||| ||||||||  ||||||||||||| ||||||| |||||| | ||  |||||||||||||    
T  1063727 attatacccttacttattaaatttcatttaacttaactactccactaactacaattactcagagtattttagtaaat 1063651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 31283526 - 31283488
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaact 257  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  31283526 tattatatccttatttattgaatttcatccaacttaact 31283488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 8115242 - 8115177
Alignment:
Q  126 gtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatc 191  Q
    ||||||||||||||| |||||| |||  |||| |||||||| ||||| || ||||||| |||||||    
T  8115242 gtctcaaaataattgtctcttttgcaatttttctttgtctcaaaataattatcactttcgaatatc 8115177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 17835374 - 17835450
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||| || |||| ||||||||||||||||||  || |||| ||||||||||   |||||||||||||    
T  17835374 tattataccattattaat-gaatatcatccaacttaactactaaacaaactacaattaataaatgtattttagtaaat 17835450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 6834485 - 6834417
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||| |||| ||| ||| ||| ||||||||||  ||||||||| | | |||||||||||    
T  6834485 tttatttattgaatctcattcaatttatctattctactaactataattaataaaggtgttttagtaaat 6834417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 36476496 - 36476650
Alignment:
Q  142 ctctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatacctttatttattgaat 241  Q
    ||||||| ||| |||||||| |||| ||||| |||||||||||||||| | || ||| || |||||       | | ||||||||| |||||||||||||    
T  36476496 ctctttaacattttttatttttctcaaaataattgtcactttagaataccaatgcagcatttattacttttttctattattatacccttatttattgaat 36476595  T
Q  242 ttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  36476596 ttcatcaaacttaactactctactaactacaattaataagggtattttagtaaat 36476650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 36460642 - 36460465
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||| | ||| |||| |||||| |||  |||||||| |||| ||||| |||||||||||  ||||| || || ||| |||||       ||||    
T  36460642 tccctccgtcttataattattgtctcttttgcaatttttatttttctcaaaataattgtcactttacgatatcaatgcaatatttattatttgtttccac 36460543  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||| |||||    
T  36460542 tattatacccttatttattgaatttcatccaacttaattactccattaactacaattaataagaatattttaataaat 36460465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 17652642 - 17652816
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||| ||||| |||||||| ||||||| ||| |||| ||| |||| ||||| |||||||||||||||||  || |||||| ||| |       | |     
T  17652642 tccctccctctcataataattgtctctttaccatcttttctttttctcaaaataattgtcactttagaatattaatgcagtatttat-aattttttcaat 17652740  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaa 294  Q
    ||||||||| ||||||||| |||||||||||||||||||||   ||||||| |||||||||||||| |||||||||    
T  17652741 tattatacccttatttattaaatttcatccaacttaactacctcactaactacaattaataaggatgttttagtaa 17652816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 296
Target Start/End: Complemental strand, 43254090 - 43253912
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnn-cca 217  Q
    ||||||||||||| ||| |||| ||||||||||| |||| | | |||| ||||| ||||||||||| |||| | || ||  || |||||        |||    
T  43254090 tccctccgtctcacaattattgtctctttagcattttttctatttctcaaaataattgtcactttacaataccaatgcaacatttattagtttttttcca 43253991  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| ||||||| |||||||||||| |||||||||||| ||||||| |||||||||||| | |||||||||||    
T  43253990 ctattatacccttatttaatgaatttcatcccacttaactactccactaactacaattaataagggtgttttagtaaat 43253912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 119 - 296
Target Start/End: Original strand, 27471224 - 27471401
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccac 218  Q
    ||||||||||||| ||| |||| ||||||||||| |||| ||| |||| ||||| ||||||||||| |||| | || ||| || |||||       ||||    
T  27471224 tccctccgtctcacaattattgtctctttagcattttttctttttctcaaaataattgtcactttataataccaatacagcatttattatttttgtccac 27471323  T
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||  |||||||||||||||||||||||| |||||||||||||| ||||  |  ||||||||||  | |||||||||||    
T  27471324 taccatacctttatttattgaatttcattcaacttaactactccactacttataattaataagagtgttttagtaaat 27471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 127 - 296
Target Start/End: Complemental strand, 30190878 - 30190709
Alignment:
Q  127 tctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactattatac 226  Q
    ||||| |||||||| ||||||||||  |||| ||| |||| ||||| ||||||||||||||||   ||  |  || |||||       ||| |||| |||    
T  30190878 tctcataataattgtctctttagcactttttctttttctcaaaataattgtcactttagaataaaaatgtaacatttattattaatttccattattttac 30190779  T
Q  227 ctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    | ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  30190778 ccttattaattgaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaat 30190709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 19611896 - 19611975
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  19611896 actataatacatttatttattgaatttcatcaaacttaactactccactaacaacaattaataaggatattttagtaaat 19611975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 10366876 - 10366714
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatatttta-tttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnncca 217  Q
    ||||| ||||||| |||| ||| ||||||||||| ||||  ||| |||| ||||| |||||||||||||||| | || ||  || |||||       |||    
T  10366876 tccctacgtctcacaatatttgcctctttagcatttttttctttttctcaaaataattgtcactttagaataccaatgcaacatttattattttttccca 10366777  T
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
     ||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  10366776 ttattatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataa 10366714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 37695792 - 37695715
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| | |||||||||||    
T  37695792 tattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaat 37695715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 39043883 - 39043806
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||||||||    
T  39043883 tattatacccttatttattgaatttcattcaacttaactactccactaactacaattaataaaggtattttagtaaat 39043806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 44301547 - 44301628
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| ||||| | ||||| |||||| |||||||||||||    
T  44301547 ccactattatactcttatttattgaatttcatccaacttaactactccactaattacaattgataagggtattttagtaaat 44301628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 19823003 - 19823077
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||| |||||||||||| | |||||||||||    
T  19823003 tatacccttatttattgaatttcatccaacttaactattccactaactacaattaataagggtgttttagtaaat 19823077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 1778632 - 1778708
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||||    
T  1778632 tattatacccttatttattgaatttcatccaacttatctactccactaactacaa-taataaggatgttttagtaaat 1778708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 8679184 - 8679103
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |  |||||||  ||||||||||||| |||||||||||    
T  8679184 ccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataaggatcttttagtaaat 8679103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 12904849 - 12904914
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  12904849 ccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataa 12904914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 28690907 - 28690831
Alignment:
Q  220 attatacctttatttattgaatttcatccaacttaacta-ctctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||    
T  28690907 attatacatttatttattgaatttcatccaacttaactatctc-actaactacaattaataaagatattttagtaaat 28690831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 29024091 - 29024015
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||| ||| |||||||||||    
T  29024091 tattataccattatttattgaatttcatccaacttaattactccactaactacaattaataa-gatgttttagtaaat 29024015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 11632067 - 11632147
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||||||||||||||||||||||||  || ||||||| |||||||||| | | |||||||||||    
T  11632067 cactattatacttttatttattgaatttcatccaacttaacttttccactaactacaattaataaaggtgttttagtaaat 11632147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 34750483 - 34750562
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||| | |||||||||| |||||||||| || |||| |||||||||||||| |||||||||||    
T  34750483 actattataccattatttattaattttcatccaagttaactactccaccaactacaattaataaggatgttttagtaaat 34750562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 296
Target Start/End: Complemental strand, 37773188 - 37773013
Alignment:
Q  123 tccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatatt--annnnnnnccacta 220  Q
    ||||||||| |||||||| ||||||||||  |||| ||| |||| ||||| ||||||||||| |||| | || ||| || ||||  |       ||| ||    
T  37773188 tccgtctcacaataattgtctctttagcaatttttctttttctcaaaataattgtcactttacaataccaatgcagcatttattttatttttttccatta 37773089  T
Q  221 ttatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| ||||||| |||||||||| ||||||||||| || ||| |||  ||||||||||| |||||||||||||    
T  37773088 ttatacccttatttaatgaatttcattcaacttaactattccactgactataattaataagggtattttagtaaat 37773013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 49447919 - 49447840
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||| ||||||||| || ||||||| |||||||||| |||||||||||| |||||| ||||||    
T  49447919 actattatacccttatttattaaatttcatcaaatttaactattctactaactacaattaataagggtattttggtaaat 49447840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 24569219 - 24569149
Alignment:
Q  226 cctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||| ||||| |||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  24569219 ccttcatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaat 24569149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 38137576 - 38137498
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    ||||||||||| ||||||||||||||||||||| || |||||||| | ||||||| || |||||||| |||||||||||    
T  38137576 ccactattatatctttatttattgaatttcatcgaatttaactaccccactaactacagttaataagaatattttagta 38137498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 3901275 - 3901198
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||||||||||| ||| | ||||||| ||| ||||||| || |||||||||||    
T  3901275 tattatacccttatttattgaatttcatccaacttaagtaccccactaactacaactaataagaatgttttagtaaat 3901198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 5323063 - 5322986
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||| |  ||||||||||  |||||||||||||    
T  5323063 tattatacccttatttattgaatttcatcaaacttaactactttactaattataattaataagtgtattttagtaaat 5322986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 11905811 - 11905888
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| |||||||||||||||||||||||||||||| |||| | ||||| |||||||||||| |  ||||||||||    
T  11905811 tattatatctttatttattgaatttcatccaacttaacaactccattaactacaattaataagggtgctttagtaaat 11905888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 23004511 - 23004434
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagta 293  Q
    |||| ||| ||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||||| | ||||||||    
T  23004511 cacttttacacccttatttattgaatttcatacaacttaactactccactaactacaattaataagggtgttttagta 23004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 37497481 - 37497558
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| || |||| || | | |||||||||||    
T  37497481 tattatacgtttatttattgaatttcatccaacttaactactccactaactacagttaacaacggtgttttagtaaat 37497558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 51838089 - 51838008
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| ||||||| |||||||||| |||| ||||||||| |||| || ||| |||||||| |||||||||||||    
T  51838089 ccactattatacccttatttaatgaatttcattcaacgtaactactccactagctacaactaataagggtattttagtaaat 51838008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 12736701 - 12736621
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||  ||||| | |||||||||||| |||| ||||||||    
T  12736701 cactattatacccttatttattgaattttatccaaattaactactacactaagtacaattaataagggtattgtagtaaat 12736621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 24703647 - 24703692
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactact 260  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  24703647 ccactattatatctttatttattgaatttcatccaacttaactact 24703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 37311939 - 37312016
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  ||||||||||||||||||  || |||||||||| ||||||| |||||||||||| | |||||||||||    
T  37311939 tattatactcttatttattgaatttcattaaatttaactactccactaactacaattaataagggttttttagtaaat 37312016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 36463063 - 36462995
Alignment:
Q  228 tttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| ||||||||||||||||| ||||| || |||  |||||||||||| |||||||||||||    
T  36463063 tttatttatttaatttcatccaacttaattactccacaaacaacaattaataaggttattttagtaaat 36462995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 38795235 - 38795396
Alignment:
Q  122 ctccgtctcaaaataattgactctttagcatatttta-tttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccacta 220  Q
    |||| |||||| ||||||| ||||||||||| ||||  |||||||| ||||| |||||||||||||||| | || || ||| |  |        ||||||    
T  38795235 ctccatctcaacataattgtctctttagcatttttttctttgtctcaaaataattgtcactttagaataccaatgcaatattttattttattttccacta 38795334  T
Q  221 ttatacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    |||| || || |||||| |||||||||||||||||| |||| || |||| ||||||||||||    
T  38795335 ttatgcccttttttattaaatttcatccaacttaacaactccaccaactacaattaataagg 38795396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 41351688 - 41351640
Alignment:
Q  221 ttatacctttatttattgaatttcatccaacttaactactctactaact 269  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  41351688 ttatacctttatttattgaatttcattcaacttaactactccactaact 41351640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 3313253 - 3313316
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagt 292  Q
    ||||||||||||||||||||||||||| ||||| | ||||| |||||||||||| | |||||||    
T  3313253 ttatttattgaatttcatccaacttaaatactccattaactacaattaataagggtgttttagt 3313316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 34957502 - 34957569
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||  |||| |||||||| |||||||  ||||||||||||||||| |||||||    
T  34957502 ttatttattgaatttcatttaactgaactactccactaactataattaataaggatatttaagtaaat 34957569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 38705174 - 38705233
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattt 288  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||| ||||||    
T  38705174 ttatttattgaatttcatctaacttaattactcaactaactacaattaataagaatattt 38705233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 40194488 - 40194563
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttta 290  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||| | ||||||| |||||||||||  |||||||    
T  40194488 ccactattatatctttatttattaaatttcttccaactcaactacgccactaactacaattaataagagtatttta 40194563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 45710849 - 45710916
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||   | |||||||||||    
T  45710849 ttatttattgaacttcatccaacttaactactccactaactacaattaataaaagtgttttagtaaat 45710916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 53560216 - 53560283
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||| ||||||||||||||||||||||  | ||||||||| | |||||||||||    
T  53560216 ttatttattgaacttcattcaacttaactactctactaactatatttaataagggtgttttagtaaat 53560283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 40462304 - 40462366
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaa 277  Q
    ||||||||||||   |||||||||||||| |||||||||||||||||| |||||| |||||||    
T  40462304 ccactattatacaactatttattgaattttatccaacttaactactcttctaactacaattaa 40462366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 1018989 - 1018908
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| ||||| ||||||||||| || |||  |||| ||||||||| ||||||| |||||||||| ||||| |||||||||    
T  1018989 ccactaatatacttttatttattgtatctcaagcaacctaactactccactaactgcaattaataatgatatattagtaaat 1018908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 14194545 - 14194594
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaac 268  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  14194545 tattatacctttattaattgaatttcatccaacttaattactccactaac 14194594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 19609288 - 19609365
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||| |||||||||||||||| ||| |||||| |||||| ||||||  ||| ||||||| ||||||| ||||||    
T  19609288 tattatacatttatttattgaattttatcaaacttatctactccactaacaacaagtaataagaatatttttgtaaat 19609365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 33491489 - 33491408
Alignment:
Q  216 cactattatacctttatttattgaa-tttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| ||||||||| || |||||| |||||||||||||| |||||||  ||||||||||  | |||||||||||    
T  33491489 cactattatacccttatttattaaaatttcatacaacttaactactccactaactataattaataagagtgttttagtaaat 33491408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 50036559 - 50036510
Alignment:
Q  218 ctattatacctttatttattgaatttcatccaacttaactactctactaa 267  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||    
T  50036559 ctattatacctttatttattgaatttcatcaaacttaactattcaactaa 50036510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 54726478 - 54726551
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| ||||||||| || |||||| ||||||||||||| | ||||| |||||||||| ||| |||||||||||    
T  54726478 atacccttatttattaaacttcatctaacttaactactccattaactacaattaataaagatgttttagtaaat 54726551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 48541109 - 48541049
Alignment:
Q  236 ttgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| |||||||||||||| ||||| | ||||||||||| |||||||| |||||    
T  48541109 ttgaatttcattcaacttaactactcaactaattacaattaataagaatattttaataaat 48541049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 30682182 - 30682115
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||| |||||||||| || || | ||||| |||||||||||  |||||||||||||    
T  30682182 ttatttattgaatttcgtccaacttaattattccattaactacaattaataagattattttagtaaat 30682115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 31158640 - 31158598
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaacta 258  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  31158640 cactattataccattatttattgaatttcatctaacttaacta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 43715202 - 43715267
Alignment:
Q  126 gtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatc 191  Q
    |||||| |||| ||| ||||||| ||| |||||||| |||| ||||| ||||||||||||||||||    
T  43715202 gtctcacaatatttgtctctttaacattttttatttttctcaaaataattgtcactttagaatatc 43715267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 43719272 - 43719321
Alignment:
Q  235 attgaatttcatccaacttaactactctactaactccaattaataaggat 284  Q
    |||||||| ||||||| |||||||||| ||||||| ||||||||||||||    
T  43719272 attgaattccatccaatttaactactccactaactacaattaataaggat 43719321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 30711059 - 30711139
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||   ||||||||||||||||||| ||||||| | ||| | ||||| |||||||||| | | |||||||||||    
T  30711059 cactattataatcttatttattgaatttcatctaacttaattgctccattaactacaattaataatggtgttttagtaaat 30711139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 54477564 - 54477508
Alignment:
Q  240 atttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||| |||||||||||||| | ||||| ||||||||||  ||||||||||||||    
T  54477564 atttcattcaacttaactactccattaactacaattaataaaaatattttagtaaat 54477508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 23068187 - 23068250
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataagg 282  Q
    |||||||| |||||||||||||||||||| ||||||| || |  || |||| ||||||||||||    
T  23068187 tattatacttttatttattgaatttcatctaacttaaatatttcacaaactacaattaataagg 23068250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 52290892 - 52290959
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||| || || |||||||||||||| |||||||  ||||||||||| | ||||| |||||    
T  52290892 ttatttattgaactttattcaacttaactactccactaactataattaataaggctgttttaataaat 52290959  T

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Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 30861393 - 30861455
Alignment:
Q  229 ttatttattgaattt-catccaacttaactactctactaactccaattaataaggatatttta 290  Q
    ||||||||||||||| |||  || |||| |||||||||||||  |||||||||||||||||||    
T  30861393 ttatttattgaattttcattaaatttaattactctactaactataattaataaggatatttta 30861455  T

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Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 27549415 - 27549334
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||||||||||| ||  || |||||||| | |||||||  || |||||| | | |||||||||||    
T  27549415 ccactattataactttatttattgaatttaatttaatttaactacgccactaactataactaataatgttgttttagtaaat 27549334  T

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Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 41038509 - 41038448
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatatttta 290  Q
    |||||||||||| |||| ||||||||||||||  | ||||| |||||||||||  |||||||    
T  41038509 ttatttattgaacttcaaccaacttaactacttcattaactacaattaataagagtatttta 41038448  T

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Target: scaffold0330 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 5382 - 5456
Alignment:
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  5382 tatacctttatttattgaatttcatccaacttaactactccactaactaaaattaataaggatattttagtaaat 5456  T

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Target: scaffold0095 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 296
Target Start/End: Original strand, 50096 - 50270
Alignment:
Q  122 ctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaatatccattcagtatatattannnnnnnccactat 221  Q
    |||||||||| |||||||| ||||||||||| |||| | | | || ||||| |||||||||||||||||| || ||| || |||||        ||||||    
T  50096 ctccgtctcataataattgtctctttagcattttttttctttgtcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactat 50195  T
Q  222 tatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||| ||||||||| |||||||| |||||||| ||||| |||||||  ||||||||| |||||| ||||||||    
T  50196 tatacccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaat 50270  T

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Target: scaffold0095; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 22333 - 22414
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaa-cttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    |||||||||| | ||||||||||||||| ||||||  |||||||||  ||||||  | |||||||| |||||||||||||||    
T  22333 cactattatatccttatttattgaattttatccaattttaactactgcactaaccacgattaataaagatattttagtaaat 22414  T

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Target: scaffold0159 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 34149 - 34068
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| |||||||||||| | |||||||||||    
T  34149 ccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaat 34068  T

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Target: scaffold0182 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 20479 - 20402
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| | ||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||| |||||    
T  20479 tattataccctcatttattgaatttcatccaacttaactacttcactaactgcaattaataagggtattttactaaat 20402  T

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Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 105673 - 105749
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaa 295  Q
    ||||||||| |||||||| ||||||||| |||||||||||||  ||||||| |||||||||||| | ||||||||||    
T  105673 tattatacccttatttatcgaatttcattcaacttaactacttcactaactacaattaataagggtgttttagtaaa 105749  T

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Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 136165 - 136086
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||  |||||||  ||||||||||| | |||||||||||    
T  136165 actattataccattatttatttaatttcatcaaacttaactacttcactaactataattaataagggtgttttagtaaat 136086  T

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Target: scaffold1809 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 814 - 733
Alignment:
Q  215 ccactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||| |||||||||||||||||||||| ||||  |||| ||||||| |||| ||||| | | |||||||||||    
T  814 ccactattatacccttatttattgaatttcatccaatttaaacactccactaactacaatcaataaaggtgttttagtaaat 733  T

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Target: scaffold0583 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 2014 - 2091
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||||||| ||  ||| || || ||||||| |||||||||||||| |||||||||||    
T  2014 tattatacccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataaggatgttttagtaaat 2091  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 8103 - 8030
Alignment:
Q  223 atacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||| |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||| | |||| ||||||    
T  8103 atacccttatttattgaacttcatccaacttaattactccactaactacaattaataagggtgttttggtaaat 8030  T

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Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 1693 - 1770
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||| ||||||||| || | ||| |||||||    
T  1693 tattatacccttatttattgaatttaatccaacttaactactccactgactacaattaatacgggtgtttaagtaaat 1770  T

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Target: scaffold0110; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 1445 - 1515
Alignment:
Q  119 tccctccgtctcaaaataattgactctttagcatattttatttgtctctaaatatttgtcactttagaata 189  Q
    ||||||||||||| |||||||| ||||||| ||| |||| ||| |||  ||||| ||||||||||||||||    
T  1445 tccctccgtctcacaataattgtctctttaccattttttctttttcttaaaataattgtcactttagaata 1515  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 252930 - 252854
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||  |||||||||||||||||| |||||||||||||| | | ||| |||||||||| |||||||||||||||    
T  252930 tattatactcttatttattgaatttcattcaacttaactactccaat-actacaattaataacgatattttagtaaat 252854  T

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Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 14297 - 14233
Alignment:
Q  216 cactattatacctttatttattgaatttcatccaacttaactactctactaactccaattaataa 280  Q
    |||||||||||||||||||||||||||||||| || |||||||||| | |||||  |||||||||    
T  14297 cactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaataa 14233  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 76279 - 76328
Alignment:
Q  217 actattatacctttatttattgaatttcatccaacttaactactctacta 266  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  76279 actattatacccttatttattgaatttcatctaacttaactactccacta 76328  T

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Target: scaffold0302 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 16097 - 16164
Alignment:
Q  229 ttatttattgaatttcatccaacttaactactctactaactccaattaataaggatattttagtaaat 296  Q
    ||||||||||||||||||||| ||||||| ||  | ||||| |||||||||||  | |||||||||||    
T  16097 ttatttattgaatttcatccatcttaactgcttcattaactacaattaataagtgtgttttagtaaat 16164  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 143839 - 143880
Alignment:
Q  219 tattatacctttatttattgaatttcatccaacttaactact 260  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||    
T  143839 tattatacccttatttatttaatttcatccaacataactact 143880  T

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