View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8981_low_224 (Length: 288)
Name: NF8981_low_224
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8981_low_224 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 40472825 - 40473095
Alignment:
| Q |
1 |
atgttgcactgaatgttcacctgagaaggggggatattcattgctggcttgaacctcactgtctttggcctaatggcggatattgtagtttgagaagatg |
100 |
Q |
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| T |
40472825 |
atgttgcactgaatgttcacctgagaaggggggatattcattgctggcttgaacctcactgtctttggcctaatggcggatattgtagtttgagaagatg |
40472924 |
T |
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| Q |
101 |
caattggaggagtggaatcgattgcacctgctagaagttctgagaaagatttgtaagaagaacaagtaggccttgaagcaactggtttggcaacaactac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40472925 |
caattggaggagtggaatcgattgcacctgctagaagttctgagaaagatttgtaagaagaacaagtaggccttgaagcaactggtttggcaacaactac |
40473024 |
T |
|
| Q |
201 |
tctttctgcttcttcaatatccatcatgaactgctatgtttcgcaatgtatgattctgtttgcaagacttt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40473025 |
tctttctgcttcttcaatatccatcatgaactgctatgtttcgcaatgtatgattctgtttgcaagacttt |
40473095 |
T |
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