View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8981_low_228 (Length: 285)

Name: NF8981_low_228
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8981_low_228
NF8981_low_228
[»] chr7 (37 HSPs)
chr7 (11-222)||(9625111-9625320)
chr7 (222-285)||(9623298-9623361)
chr7 (223-285)||(2465823-2465886)
chr7 (223-285)||(2941750-2941813)
chr7 (223-285)||(9125049-9125112)
chr7 (223-285)||(28495944-28496007)
chr7 (223-285)||(42515634-42515697)
chr7 (222-285)||(35474113-35474177)
chr7 (223-285)||(2466014-2466077)
chr7 (223-285)||(6719067-6719130)
chr7 (223-285)||(13122498-13122561)
chr7 (223-285)||(13125129-13125192)
chr7 (223-285)||(28495601-28495664)
chr7 (223-285)||(34405584-34405647)
chr7 (223-285)||(36422342-36422405)
chr7 (222-285)||(18833376-18833440)
chr7 (223-285)||(2189234-2189297)
chr7 (223-285)||(2193346-2193409)
chr7 (223-285)||(42515182-42515245)
chr7 (223-285)||(46425831-46425894)
chr7 (223-279)||(7646471-7646528)
chr7 (223-285)||(679906-679969)
chr7 (223-285)||(2611645-2611708)
chr7 (227-285)||(11517386-11517445)
chr7 (223-285)||(31406577-31406640)
chr7 (222-285)||(26421752-26421816)
chr7 (223-285)||(6747591-6747654)
chr7 (215-285)||(26421290-26421361)
chr7 (223-262)||(43776283-43776322)
chr7 (223-276)||(7646514-7646568)
chr7 (222-285)||(25182451-25182515)
chr7 (240-285)||(31743834-31743880)
chr7 (222-285)||(7461343-7461406)
chr7 (223-282)||(16192412-16192472)
chr7 (222-285)||(22529227-22529291)
chr7 (222-285)||(29357448-29357512)
chr7 (226-285)||(35527117-35527177)
[»] chr4 (38 HSPs)
chr4 (11-222)||(13611926-13612135)
chr4 (222-285)||(13613884-13613947)
chr4 (222-285)||(49998726-49998790)
chr4 (223-285)||(12691986-12692049)
chr4 (223-285)||(44471312-44471375)
chr4 (223-285)||(50814812-50814875)
chr4 (222-285)||(50398979-50399043)
chr4 (223-285)||(15306078-15306141)
chr4 (223-285)||(50398525-50398588)
chr4 (223-285)||(35871718-35871780)
chr4 (230-285)||(4127431-4127487)
chr4 (222-285)||(21220317-21220381)
chr4 (223-285)||(1645736-1645799)
chr4 (227-285)||(7678613-7678672)
chr4 (223-285)||(21067372-21067435)
chr4 (223-285)||(23943229-23943292)
chr4 (223-285)||(24628964-24629027)
chr4 (227-285)||(27029367-27029426)
chr4 (223-285)||(51331268-51331331)
chr4 (223-285)||(44470862-44470924)
chr4 (226-285)||(23091501-23091561)
chr4 (223-285)||(23350270-23350333)
chr4 (223-285)||(23942776-23942839)
chr4 (223-285)||(24629420-24629483)
chr4 (222-285)||(14351885-14351949)
chr4 (223-285)||(1464237-1464300)
chr4 (223-285)||(4127876-4127939)
chr4 (227-285)||(4185805-4185864)
chr4 (222-285)||(29628654-29628717)
chr4 (227-285)||(53996106-53996165)
chr4 (223-285)||(27026593-27026655)
chr4 (233-285)||(14572148-14572200)
chr4 (223-285)||(3169296-3169359)
chr4 (223-285)||(14571708-14571771)
chr4 (227-285)||(17029420-17029479)
chr4 (223-285)||(27578444-27578507)
chr4 (223-285)||(33764950-33765013)
chr4 (223-260)||(11828472-11828509)
[»] chr5 (30 HSPs)
chr5 (222-285)||(3886593-3886657)
chr5 (223-285)||(2193906-2193969)
chr5 (223-285)||(2474049-2474112)
chr5 (223-285)||(2474495-2474558)
chr5 (223-285)||(8642027-8642090)
chr5 (218-285)||(22556626-22556694)
chr5 (223-285)||(17445448-17445511)
chr5 (218-284)||(22557060-22557127)
chr5 (223-285)||(34371702-34371765)
chr5 (223-285)||(34372158-34372221)
chr5 (223-285)||(42788639-42788702)
chr5 (226-285)||(189158-189218)
chr5 (223-285)||(3887050-3887113)
chr5 (227-285)||(21886143-21886202)
chr5 (223-285)||(34867880-34867943)
chr5 (223-283)||(8391315-8391376)
chr5 (226-285)||(18304521-18304581)
chr5 (222-285)||(29680099-29680163)
chr5 (223-285)||(1821996-1822059)
chr5 (223-285)||(10927396-10927459)
chr5 (223-285)||(11757274-11757337)
chr5 (223-285)||(39147029-39147092)
chr5 (227-285)||(20039472-20039530)
chr5 (223-285)||(10926939-10927002)
chr5 (227-285)||(20858538-20858597)
chr5 (223-285)||(27646828-27646891)
chr5 (223-284)||(15513005-15513067)
chr5 (223-279)||(30684549-30684606)
chr5 (225-283)||(4673466-4673525)
chr5 (223-279)||(30719798-30719855)
[»] chr1 (36 HSPs)
chr1 (222-285)||(20056808-20056872)
chr1 (223-285)||(20054073-20054136)
chr1 (223-285)||(20054529-20054592)
chr1 (223-285)||(20054985-20055048)
chr1 (223-285)||(20055441-20055504)
chr1 (223-285)||(20055897-20055960)
chr1 (223-285)||(20056353-20056416)
chr1 (223-285)||(20057256-20057319)
chr1 (223-285)||(20057712-20057775)
chr1 (223-285)||(20845654-20845717)
chr1 (223-285)||(52250296-52250359)
chr1 (222-285)||(2635014-2635078)
chr1 (222-285)||(50002699-50002763)
chr1 (223-285)||(16451926-16451989)
chr1 (223-285)||(16461079-16461142)
chr1 (227-285)||(20060337-20060396)
chr1 (227-285)||(20061188-20061247)
chr1 (223-285)||(38340996-38341059)
chr1 (223-285)||(43057058-43057121)
chr1 (226-285)||(12728082-12728142)
chr1 (223-285)||(43057516-43057579)
chr1 (223-285)||(51372867-51372930)
chr1 (223-277)||(52250641-52250696)
chr1 (223-277)||(52250978-52251033)
chr1 (230-283)||(50002285-50002339)
chr1 (223-285)||(35759601-35759664)
chr1 (223-285)||(46693728-46693791)
chr1 (223-285)||(50003068-50003131)
chr1 (224-285)||(31822657-31822719)
chr1 (222-285)||(12883614-12883678)
chr1 (226-285)||(30872946-30873006)
chr1 (223-285)||(35760907-35760970)
chr1 (228-285)||(2328405-2328463)
chr1 (223-285)||(23180820-23180883)
chr1 (224-285)||(7548181-7548243)
chr1 (222-285)||(16907324-16907388)
[»] scaffold0499 (1 HSPs)
scaffold0499 (223-285)||(2044-2107)
[»] scaffold0389 (1 HSPs)
scaffold0389 (223-285)||(13526-13589)
[»] chr8 (29 HSPs)
chr8 (223-285)||(10844973-10845036)
chr8 (223-285)||(12827247-12827310)
chr8 (223-285)||(22026469-22026532)
chr8 (223-285)||(10844608-10844671)
chr8 (223-285)||(22548542-22548605)
chr8 (223-285)||(22548988-22549051)
chr8 (223-285)||(25144862-25144925)
chr8 (223-285)||(25148057-25148120)
chr8 (223-285)||(27925989-27926052)
chr8 (222-285)||(41659097-41659161)
chr8 (223-285)||(17103171-17103234)
chr8 (223-285)||(25147626-25147689)
chr8 (223-285)||(34308928-34308991)
chr8 (223-285)||(6464903-6464966)
chr8 (223-285)||(12100781-12100844)
chr8 (223-285)||(27022331-27022394)
chr8 (227-285)||(31283648-31283707)
chr8 (223-285)||(34308472-34308535)
chr8 (223-285)||(2044148-2044211)
chr8 (223-285)||(8080335-8080398)
chr8 (227-285)||(21316106-21316165)
chr8 (231-285)||(22840530-22840585)
chr8 (226-285)||(25307856-25307914)
chr8 (223-285)||(28453428-28453491)
chr8 (223-285)||(32292487-32292550)
chr8 (223-285)||(41913060-41913123)
chr8 (222-285)||(27819238-27819302)
chr8 (228-285)||(15819014-15819071)
chr8 (214-282)||(28375038-28375107)
[»] chr6 (32 HSPs)
chr6 (223-285)||(13492879-13492942)
chr6 (223-285)||(16520058-16520121)
chr6 (223-283)||(17851010-17851071)
chr6 (222-285)||(15929672-15929736)
chr6 (223-285)||(9352152-9352215)
chr6 (223-285)||(13492422-13492485)
chr6 (223-285)||(20850411-20850474)
chr6 (223-284)||(2681209-2681271)
chr6 (229-285)||(7911968-7912025)
chr6 (223-285)||(6330905-6330968)
chr6 (223-285)||(11062375-11062438)
chr6 (223-285)||(13191506-13191569)
chr6 (223-285)||(17027524-17027587)
chr6 (223-285)||(20896681-20896744)
chr6 (223-283)||(17851466-17851527)
chr6 (223-285)||(7912400-7912463)
chr6 (228-285)||(3652576-3652634)
chr6 (223-276)||(28780209-28780263)
chr6 (223-275)||(17731102-17731155)
chr6 (223-285)||(2890832-2890895)
chr6 (227-285)||(9440306-9440365)
chr6 (223-285)||(20126175-20126238)
chr6 (227-285)||(20735785-20735844)
chr6 (224-285)||(23776531-23776592)
chr6 (236-285)||(27334251-27334301)
chr6 (236-285)||(27394991-27395041)
chr6 (228-279)||(1991649-1991701)
chr6 (227-285)||(23986314-23986373)
chr6 (227-285)||(28583053-28583112)
chr6 (237-285)||(15929289-15929338)
chr6 (223-279)||(21311611-21311668)
chr6 (227-259)||(2720560-2720592)
[»] chr3 (34 HSPs)
chr3 (223-285)||(13150547-13150610)
chr3 (223-285)||(28561836-28561899)
chr3 (223-285)||(31284269-31284332)
chr3 (223-285)||(11180027-11180090)
chr3 (223-285)||(50347836-50347899)
chr3 (223-283)||(13150092-13150153)
chr3 (222-285)||(25239069-25239133)
chr3 (222-285)||(39641027-39641091)
chr3 (223-285)||(2911185-2911248)
chr3 (223-285)||(4067353-4067416)
chr3 (223-285)||(8067370-8067433)
chr3 (223-285)||(14814039-14814102)
chr3 (223-285)||(14820244-14820307)
chr3 (223-281)||(16811475-16811534)
chr3 (223-285)||(32227590-32227653)
chr3 (227-285)||(39653254-39653313)
chr3 (223-283)||(25238677-25238738)
chr3 (222-285)||(25802540-25802604)
chr3 (223-285)||(27187323-27187386)
chr3 (223-285)||(32227214-32227277)
chr3 (223-285)||(32386727-32386790)
chr3 (223-285)||(41472390-41472453)
chr3 (227-285)||(16811015-16811074)
chr3 (223-285)||(20885110-20885173)
chr3 (223-285)||(25230241-25230304)
chr3 (223-285)||(25237828-25237891)
chr3 (223-285)||(30529777-30529840)
chr3 (226-285)||(7493971-7494031)
chr3 (223-285)||(25230698-25230761)
chr3 (223-285)||(25238285-25238348)
chr3 (223-285)||(25248201-25248264)
chr3 (231-285)||(32796936-32796991)
chr3 (223-285)||(37045125-37045188)
chr3 (226-285)||(7477281-7477341)
[»] chr2 (24 HSPs)
chr2 (223-285)||(8256616-8256679)
chr2 (223-285)||(11388277-11388340)
chr2 (223-285)||(29804772-29804835)
chr2 (223-285)||(30966780-30966843)
chr2 (223-285)||(41754379-41754442)
chr2 (223-285)||(1912615-1912677)
chr2 (223-285)||(24818416-24818479)
chr2 (222-285)||(16379483-16379547)
chr2 (222-285)||(33175048-33175112)
chr2 (226-285)||(33771091-33771151)
chr2 (223-285)||(5399810-5399873)
chr2 (223-285)||(16379027-16379090)
chr2 (223-285)||(25337990-25338053)
chr2 (223-285)||(30966324-30966387)
chr2 (223-285)||(33174593-33174656)
chr2 (223-283)||(25434049-25434110)
chr2 (226-285)||(18098874-18098934)
chr2 (223-285)||(11394624-11394686)
chr2 (223-285)||(29259613-29259676)
chr2 (223-285)||(30963713-30963776)
chr2 (222-285)||(83107-83171)
chr2 (222-285)||(1707131-1707195)
chr2 (223-285)||(38898905-38898968)
chr2 (226-263)||(32377712-32377749)
[»] scaffold0020 (1 HSPs)
scaffold0020 (223-284)||(107456-107518)
[»] scaffold0333 (2 HSPs)
scaffold0333 (227-285)||(4651-4710)
scaffold0333 (223-285)||(5111-5174)
[»] scaffold0243 (1 HSPs)
scaffold0243 (223-285)||(1310-1373)
[»] scaffold0168 (1 HSPs)
scaffold0168 (223-285)||(2832-2895)
[»] scaffold0024 (1 HSPs)
scaffold0024 (223-285)||(105810-105873)
[»] scaffold0018 (1 HSPs)
scaffold0018 (223-285)||(10390-10453)
[»] scaffold0047 (2 HSPs)
scaffold0047 (223-285)||(18128-18190)
scaffold0047 (223-285)||(17591-17654)
[»] scaffold0002 (1 HSPs)
scaffold0002 (223-283)||(154849-154910)
[»] scaffold0322 (1 HSPs)
scaffold0322 (223-285)||(19056-19119)
[»] scaffold0022 (4 HSPs)
scaffold0022 (223-285)||(162671-162734)
scaffold0022 (223-279)||(163167-163224)
scaffold0022 (223-276)||(163127-163181)
scaffold0022 (229-285)||(69814-69871)
[»] scaffold0040 (1 HSPs)
scaffold0040 (223-285)||(2203-2266)
[»] scaffold0277 (1 HSPs)
scaffold0277 (223-276)||(14695-14749)
[»] scaffold0557 (1 HSPs)
scaffold0557 (226-285)||(2195-2255)
[»] scaffold0005 (2 HSPs)
scaffold0005 (233-285)||(245176-245228)
scaffold0005 (223-285)||(245605-245668)
[»] scaffold0036 (1 HSPs)
scaffold0036 (235-285)||(26160-26211)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 9625320 - 9625111
Alignment:
Q  11 gagcacagaaacactcactctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcgg 110  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9625320 gagcacagaaacactcact--aacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcgg 9625223  T
Q  111 ttctctagctgaactttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9625222 ttctctagctgaagtttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 9625123  T
Q  211 gtagaattcaga 222  Q
    ||||||||||||    
T  9625122 gtagaattcaga 9625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 9623361 - 9623298
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9623361 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatata 9623298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2465886 - 2465823
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2465886 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 2465823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 2941750 - 2941813
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2941750 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 2941813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 9125112 - 9125049
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  9125112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 9125049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 28496007 - 28495944
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  28496007 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 28495944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 42515697 - 42515634
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  42515697 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 42515634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 35474113 - 35474177
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  35474113 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatata 35474177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2466077 - 2466014
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  2466077 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatata 2466014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 6719067 - 6719130
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  6719067 cacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 6719130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 13122498 - 13122561
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13122498 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 13125129 - 13125192
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13125129 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13125192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 28495601 - 28495664
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  28495601 cacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatata 28495664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 34405584 - 34405647
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  34405584 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatata 34405647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 36422405 - 36422342
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  36422405 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 36422342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 18833440 - 18833376
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||    
T  18833440 acacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatata 18833376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2189297 - 2189234
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  2189297 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatata 2189234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2193409 - 2193346
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||    
T  2193409 cacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatata 2193346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 42515245 - 42515182
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  42515245 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatata 42515182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 46425894 - 46425831
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||||    
T  46425894 cacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatata 46425831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 7646471 - 7646528
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 279  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  7646471 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtt 7646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 679969 - 679906
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||||||    
T  679969 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatata 679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 2611645 - 2611708
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||| ||||    
T  2611645 cacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttata 2611708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 11517386 - 11517445
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  11517386 cttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatata 11517445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 31406577 - 31406640
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  || | ||||||| |||||||||||||||||||||||||    
T  31406577 cacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatata 31406640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 26421752 - 26421816
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||| ||||||||| ||||| ||||||| ||||||||| |||||||||| ||||    
T  26421752 acacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtata 26421816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 6747591 - 6747654
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||||||||||    
T  6747591 cacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatata 6747654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 26421290 - 26421361
Alignment:
Q  215 aattcagacacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||| ||||| ||||||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||    
T  26421290 aattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatata 26421361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 43776283 - 43776322
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaa 262  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43776283 cacgcttaactgtggagttcttatggaatgagctaccgaa 43776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 7646568 - 7646514
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 276  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  7646568 cacgcttaactgtggagttcttatggaatgagttaccgaaaacaagatgcatctt 7646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 25182515 - 25182451
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatata 285  Q
    |||| |||||||||| ||||||||| ||||||| ||||||||  |||||| ||||||||||||||    
T  25182515 acacacttaactgtgaagttcttatggaatgagttaccgaaaataagatgtatcttgttgatata 25182451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 31743834 - 31743880
Alignment:
Q  240 ttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  31743834 ttcttatggaatgggctaccgaaaagaagatgcatcttgttgatata 31743880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 7461343 - 7461406
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| |||||||||| |||||| |||||  |||||||||| |||||||| |||||    
T  7461343 acacgcttaactgtagagttcttat-gaatgaactaccaaaaagaagatgtatcttgtttatata 7461406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 16192472 - 16192412
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgat 282  Q
    ||||||| |||||  ||||||||| ||||| |||||| ||| |||||||||||||||||||    
T  16192472 cacgcttcactgtatagttcttatggaatgggctaccaaaacgaagatgcatcttgttgat 16192412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 22529227 - 22529291
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||||||| ||||||| |  |||||| ||| |||| |||||||||||||||| |||||    
T  22529227 acacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgcatcttgtttatata 22529291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 29357448 - 29357512
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||| ||||||||| |||||||||  || | |||| ||||| ||||||||||||||||||||||    
T  29357448 acacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatata 29357512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 35527117 - 35527177
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||||||||| ||| |||||  |||| |||| ||| ||||||||||||||||||    
T  35527117 gcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatata 35527177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 13611926 - 13612135
Alignment:
Q  11 gagcacagaaacactcactctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcgg 110  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13611926 gagcacagaaacactcact--aacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcgg 13612023  T
Q  111 ttctctagctgaactttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612024 ttctctagctgaagtttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 13612123  T
Q  211 gtagaattcaga 222  Q
    ||||||||||||    
T  13612124 gtagaattcaga 13612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 13613884 - 13613947
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13613884 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatata 13613947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 49998790 - 49998726
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  49998790 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 49998726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 12691986 - 12692049
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  12691986 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 12692049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 44471312 - 44471375
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  44471312 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 44471375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 50814812 - 50814875
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  50814812 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 50814875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 50398979 - 50399043
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  50398979 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatata 50399043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 15306078 - 15306141
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  15306078 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatata 15306141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 50398525 - 50398588
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  50398525 cacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 50398588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 35871780 - 35871718
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||    
T  35871780 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaaatgcatcttgttgatata 35871718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 4127431 - 4127487
Alignment:
Q  230 aactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 4127487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 21220317 - 21220381
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  21220317 acacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatata 21220381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 1645736 - 1645799
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  1645736 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatata 1645799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 7678613 - 7678672
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  7678613 cttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatata 7678672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 21067435 - 21067372
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  21067435 cacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatata 21067372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 23943229 - 23943292
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  23943229 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatata 23943292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 24628964 - 24629027
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||    
T  24628964 cacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatata 24629027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 27029426 - 27029367
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  27029426 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatata 27029367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 51331268 - 51331331
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  51331268 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatata 51331331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 44470862 - 44470924
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||||||||    
T  44470862 cacgcttaactgtggagttcttatggaatgagttacgaacagaagatgcatcttgttgatata 44470924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 23091501 - 23091561
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||    
T  23091501 gcttaactgtggagtttttatagaataagctaccagaaagaagatgcatcttgttaatata 23091561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 23350270 - 23350333
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| || ||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  23350270 cacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatata 23350333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 23942776 - 23942839
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctac-cgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| |||||   |||||||||||||||||||||||||    
T  23942776 cacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatata 23942839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 24629420 - 24629483
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||| ||||||| ||| ||| ||||| |||||||||||||||||||||||||    
T  24629420 cacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatata 24629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 14351949 - 14351885
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||  | ||||  |||||||||||||||||||||||||    
T  14351949 acacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatata 14351885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 1464300 - 1464237
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||| || |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  1464300 cacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 1464237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 4127876 - 4127939
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||| || ||||||||| ||||  |||||||||| ||||||||||||||||||||||    
T  4127876 cacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatata 4127939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 4185864 - 4185805
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||| ||||||||||||||  |||||||||||||||||||| ||||    
T  4185864 cttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtata 4185805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 29628654 - 29628717
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||| |||||| ||  ||||  |||||||||||||||    
T  29628654 acacgcttaactgtggagttcttatggaatgggctaccaaacaaagacacatcttgttgatata 29628717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 53996106 - 53996165
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||| ||||||||||||||    
T  53996106 cttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatata 53996165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 27026655 - 27026593
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||  | ||||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  27026655 cacgcttaactacgtagttcttatggaatgggctaccaaaaaaagatgcatcttgttgatata 27026593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 14572148 - 14572200
Alignment:
Q  233 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||    
T  14572148 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatata 14572200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 3169359 - 3169296
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||||||||| || || | |||| ||| ||||||||||||||||||||||    
T  3169359 cacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatata 3169296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 14571708 - 14571771
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||    
T  14571708 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatata 14571771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 17029479 - 17029420
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| |||| || |||| |||| || ||||||||||||||||||    
T  17029479 cttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatata 17029420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 27578444 - 27578507
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||| |||||||||||| |  || | |||||||| ||||||||||||||||||||||    
T  27578444 cacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatata 27578507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 33765013 - 33764950
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| |||| |||||||||| ||||||||||  ||| ||||||||||||||||| ||||    
T  33765013 cacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtata 33764950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 11828472 - 11828509
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg 260  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  11828472 cacgcttaactgtggagttcttatggaaggagctaccg 11828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 3886593 - 3886657
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  3886593 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 3886657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2193969 - 2193906
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2193969 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 2193906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2474112 - 2474049
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2474112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 2474049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2474558 - 2474495
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2474558 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 2474495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 8642027 - 8642090
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8642027 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 8642090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 22556694 - 22556626
Alignment:
Q  218 tcagacacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  22556694 tcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatata 22556626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 17445448 - 17445511
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccga-aagaagatgcatcttgttgatata 285  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17445448 cacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatata 17445511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 22557127 - 22557060
Alignment:
Q  218 tcagacacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatat 284  Q
    |||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22557127 tcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatat 22557060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 34371765 - 34371702
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  34371765 cacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 34371702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 34372221 - 34372158
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  34372221 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 34372158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 42788639 - 42788702
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  42788639 cacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatata 42788702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 189218 - 189158
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  189218 gcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatata 189158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 3887050 - 3887113
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  3887050 cacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatata 3887113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 21886143 - 21886202
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  21886143 cttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 21886202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 34867943 - 34867880
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  34867943 cacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 34867880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 8391315 - 8391376
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgata 283  Q
    ||||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  8391315 cacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgata 8391376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 18304581 - 18304521
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  18304581 gcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatata 18304521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 29680099 - 29680163
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||||  |||| ||||||  |||||||||||||||||||||||||    
T  29680099 acacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatata 29680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 1822059 - 1821996
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||    
T  1822059 cacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatata 1821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 10927396 - 10927459
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||| ||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  10927396 cacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatata 10927459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 11757274 - 11757337
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||||||||| |||||||||||    
T  11757274 cacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatata 11757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 39147092 - 39147029
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||| |||||    
T  39147092 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatata 39147029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 20039472 - 20039530
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||    
T  20039472 cttaactgtagagttcttatggaatgggctaccaaaagaaaatgcatcttgttgatata 20039530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 10926939 - 10927002
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||| ||||||||||||||||||| |||||  ||||| ||| ||||||||||||||||||||||    
T  10926939 cacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatata 10927002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 20858538 - 20858597
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||| |||||||||||| ||||||||||| | |||||||| ||||||||||||||||    
T  20858538 cttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatata 20858597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 27646828 - 27646891
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||| ||||||  |||||||||||||||||||| ||||    
T  27646828 cacgcttaactgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttata 27646891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 15513005 - 15513067
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatat 284  Q
    |||| |||| |||||||||||||| ||||||| |||| ||| |||||||||||||||||||||    
T  15513005 cacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatat 15513067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 30684549 - 30684606
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 279  Q
    |||||||||||||||||||||||| |  ||| |||||| |||||||||||||||||||    
T  30684549 cacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtt 30684606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 4673466 - 4673525
Alignment:
Q  225 cgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgata 283  Q
    |||||||||||||||||||||| ||||||  ||||  |||||| ||||||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgata 4673525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 30719798 - 30719855
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 279  Q
    ||||||||| |||||||||||||| |  ||| |||||| |||||||||||||||||||    
T  30719798 cacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtt 30719855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 20056808 - 20056872
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20056808 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20056872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20054073 - 20054136
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20054073 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20054136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20054529 - 20054592
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20054529 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20054592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20054985 - 20055048
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20054985 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20055048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20055441 - 20055504
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20055441 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20055504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20055897 - 20055960
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20055897 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20055960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20056353 - 20056416
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20056353 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20056416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20057256 - 20057319
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20057256 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20057319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20057712 - 20057775
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20057712 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20057775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20845654 - 20845717
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20845654 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20845717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 52250359 - 52250296
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  52250359 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 52250296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 2635078 - 2635014
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  2635078 acacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtata 2635014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 50002699 - 50002763
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  50002699 acacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatata 50002763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 16451926 - 16451989
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  16451926 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatata 16451989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 16461079 - 16461142
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  16461079 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatata 16461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 20060337 - 20060396
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20060337 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20060396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 20061188 - 20061247
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20061188 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20061247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 38341059 - 38340996
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  38341059 cacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatata 38340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 43057058 - 43057121
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  43057058 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatata 43057121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 12728142 - 12728082
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  12728142 gcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatata 12728082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 43057516 - 43057579
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  43057516 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatata 43057579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 51372867 - 51372930
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||    
T  51372867 cacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatata 51372930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 52250696 - 52250641
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 277  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52250696 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 52251033 - 52250978
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 277  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52251033 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 50002285 - 50002339
Alignment:
Q  230 aactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgata 283  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  50002285 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgata 50002339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 35759601 - 35759664
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||| |||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  35759601 cacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 35759664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 46693728 - 46693791
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||||    
T  46693728 cacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatata 46693791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 50003068 - 50003131
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||| | ||||||||||| | |||||||||||||||||||||||||    
T  50003068 cacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatata 50003131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 31822657 - 31822719
Alignment:
Q  224 acgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||| | || |||||||||| ||||||||||||| |||||||||||    
T  31822657 acgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatata 31822719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 12883678 - 12883614
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||| ||||||||||||||| |||| ||||||||||||  |||||| ||||||||||||||||||    
T  12883678 acacacttaactgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatata 12883614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 30872946 - 30873006
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  30872946 gcttaattgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatata 30873006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 35760907 - 35760970
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||||||  |||||||| || |||||||||||| ||| ||||||||||||||||||||||    
T  35760907 cacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatata 35760970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 2328463 - 2328405
Alignment:
Q  228 ttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| ||||| ||||||  ||||||||||||||||||| |||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatata 2328405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 23180883 - 23180820
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatata 285  Q
    ||||||||| |||||| ||||||| ||||| |||| |||| ||||||| |||||||||||||||    
T  23180883 cacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatata 23180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 7548243 - 7548181
Alignment:
Q  224 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||| ||||||||||||||  |||| |||||| ||| ||| ||||||||||||||||||    
T  7548243 acgcttaattgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatata 7548181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 16907388 - 16907324
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||| |||||||||| |||||||  | || | |||||||||| ||||||||||||||    
T  16907388 acacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatata 16907324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 2044 - 2107
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2044 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 2107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 13526 - 13589
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  13526 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 13589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 10845036 - 10844973
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  10845036 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 10844973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 12827247 - 12827310
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  12827247 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 12827310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 22026532 - 22026469
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  22026532 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 22026469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 10844608 - 10844671
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  10844608 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 10844671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 22548542 - 22548605
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  22548542 cacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatata 22548605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 22548988 - 22549051
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  22548988 cacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatata 22549051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 25144925 - 25144862
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  25144925 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatata 25144862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 25148120 - 25148057
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  25148120 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatata 25148057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 27926052 - 27925989
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  27926052 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 27925989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 41659097 - 41659161
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  41659097 acacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatata 41659161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 17103234 - 17103171
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  17103234 cacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatata 17103171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 25147689 - 25147626
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||| |||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  25147689 cacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 25147626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 34308928 - 34308991
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||    
T  34308928 cacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatata 34308991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 6464903 - 6464966
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||| ||||||||||||  |||||| ||||||||||||||||||    
T  6464903 cacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatata 6464966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 12100844 - 12100781
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| |||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  12100844 cacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatata 12100781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 27022331 - 27022394
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| |||||||||||    
T  27022331 cacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatata 27022394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 31283648 - 31283707
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  31283648 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatata 31283707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 34308472 - 34308535
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||||||||| ||||  ||||||| |||||||||||||||||||||||||    
T  34308472 cacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatata 34308535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2044211 - 2044148
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||| ||||| ||||||  |||||| ||||||||||||||||||    
T  2044211 cacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatata 2044148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 8080335 - 8080398
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||||| ||||| ||||||  |||||| ||||||||||||||||||    
T  8080335 cacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatata 8080398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 21316106 - 21316165
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||  |||||||||| | ||||| |||||||||||||||||||    
T  21316106 cttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatata 21316165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 22840530 - 22840585
Alignment:
Q  231 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||    
T  22840530 actgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatata 22840585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 25307914 - 25307856
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||| ||||||||||||||    
T  25307914 gcttaactgtggagttcttacagaatgggctacc-aaaaaagatgtatcttgttgatata 25307856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 28453491 - 28453428
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||| |||||||||| ||||| ||||||  ||||||||||||||||||| |||||    
T  28453491 cacgcttaactgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatata 28453428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 32292550 - 32292487
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagcta-ccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| |||| |  |||||||||||| ||||||||||||    
T  32292550 cacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatata 32292487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 41913123 - 41913060
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||| ||||||||||| ||||| ||||||  |||||||| ||||||||||||||||    
T  41913123 cacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatata 41913060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 27819238 - 27819302
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||| ||||||||||||||| |||| ||||||||||  | ||||||||||||| |||||||||||    
T  27819238 acacacttaactgtggagtttttatggaatgagctattgaaaagaagatgcattttgttgatata 27819302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 15819014 - 15819071
Alignment:
Q  228 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| ||||||||| ||||| |||||||||| ||||||||||| ||||||||||    
T  15819014 ttaactgtg-agttcttatggaatgtgctaccgaaaagaagatgcatcatgttgatata 15819071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 28375038 - 28375107
Alignment:
Q  214 gaattcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgat 282  Q
    |||||||  ||||||||||| || || | |||| ||| |||||||||||| |||||||||||||||||||    
T  28375038 gaattcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgat 28375107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 13492942 - 13492879
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  13492942 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 13492879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 16520121 - 16520058
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  16520121 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 16520058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 17851071 - 17851010
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgata 283  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17851071 cacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgata 17851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 15929736 - 15929672
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  15929736 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatata 15929672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 9352215 - 9352152
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  9352215 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatata 9352152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 13492485 - 13492422
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  13492485 cacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatata 13492422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 20850474 - 20850411
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20850474 cacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 20850411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 2681209 - 2681271
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatat 284  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2681209 cacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatat 2681271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 7912025 - 7911968
Alignment:
Q  229 taactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  7912025 taactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 7911968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 6330905 - 6330968
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||    
T  6330905 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatata 6330968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 11062438 - 11062375
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  11062438 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatata 11062375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 13191506 - 13191569
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  13191506 cacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatata 13191569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 17027524 - 17027587
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  17027524 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatata 17027587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20896681 - 20896744
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||||||||    
T  20896681 cacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatata 20896744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 17851527 - 17851466
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgata 283  Q
    ||||||||| |||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  17851527 cacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgata 17851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 7912463 - 7912400
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||| |||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  7912463 cacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatata 7912400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 3652634 - 3652576
Alignment:
Q  228 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatata 3652576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 28780263 - 28780209
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 276  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  28780263 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 28780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 17731102 - 17731155
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatct 275  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  17731102 cacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatct 17731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 2890832 - 2890895
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||| ||||||||    
T  2890832 cacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatata 2890895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 9440306 - 9440365
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||    
T  9440306 cttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatata 9440365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20126175 - 20126238
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| |||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||    
T  20126175 cacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatata 20126238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 20735844 - 20735785
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||||||||||    
T  20735844 cttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatata 20735785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 23776592 - 23776531
Alignment:
Q  224 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  23776592 acgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 23776531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 27334301 - 27334251
Alignment:
Q  236 ggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatata 27334251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 27395041 - 27394991
Alignment:
Q  236 ggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatata 27394991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 1991701 - 1991649
Alignment:
Q  228 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 279  Q
    ||||||||| |||||||||  |||||||||||| |||||||||||||||||||    
T  1991701 ttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtt 1991649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 23986314 - 23986373
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||| ||||||||| |  |||||||||| ||||||||||||||||||| |||||    
T  23986314 cttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatata 23986373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 28583112 - 28583053
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||| ||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||||    
T  28583112 cttagctgtggatttcttatggaatgaactaccggaaagatgatgcatcttgttgatata 28583053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 15929338 - 15929289
Alignment:
Q  237 gagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||| ||||||||||||| |||||| ||||||||| ||||||||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatata 15929289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 21311668 - 21311611
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgtt 279  Q
    |||||||||||| ||||||||||| ||||||||| ||  |||||||||| ||||||||    
T  21311668 cacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtt 21311611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 2720560 - 2720592
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctacc 259  Q
    |||||||||||||||||||| ||||||||||||    
T  2720560 cttaactgtggagttcttatggaatgagctacc 2720592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 13150547 - 13150610
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  13150547 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 13150610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 28561899 - 28561836
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  28561899 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 28561836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 31284269 - 31284332
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  31284269 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 31284332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 11180027 - 11180090
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  11180027 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 11180090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 50347899 - 50347836
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  50347899 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatata 50347836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 13150092 - 13150153
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgata 283  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  13150092 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgata 13150153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 25239069 - 25239133
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  25239069 acacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatata 25239133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 39641091 - 39641027
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||    
T  39641091 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatata 39641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2911248 - 2911185
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  2911248 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatata 2911185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 4067353 - 4067416
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||    
T  4067353 cacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatata 4067416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 8067433 - 8067370
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  8067433 cacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatata 8067370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 14814102 - 14814039
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||    
T  14814102 cacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatata 14814039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 14820307 - 14820244
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||    
T  14820307 cacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatata 14820244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 16811534 - 16811475
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttga 281  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  16811534 cacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttga 16811475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 32227653 - 32227590
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  32227653 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatata 32227590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 39653313 - 39653254
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  39653313 cttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatata 39653254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 25238677 - 25238738
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgata 283  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  25238677 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgata 25238738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 25802540 - 25802604
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||| ||||||| ||||| |||| || |||||||||||||||||||||||||    
T  25802540 acacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatata 25802604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 27187323 - 27187386
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||  |||||||    
T  27187323 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatata 27187386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 32227214 - 32227277
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||||    
T  32227214 cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatata 32227277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 32386727 - 32386790
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |||| |||||| | ||||||||||||||||||| |||||    
T  32386727 cacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatata 32386790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 41472453 - 41472390
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  41472453 cacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatata 41472390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 16811074 - 16811015
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||| |||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  16811074 cttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatata 16811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20885110 - 20885173
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| |||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||    
T  20885110 cacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatata 20885173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 25230241 - 25230304
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||| |||||||||||||||||| ||||| ||||||  |||||||||| ||||||||||||||    
T  25230241 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatata 25230304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 25237828 - 25237891
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||| |||||||||||||||||| ||||| ||||||  |||||||||| ||||||||||||||    
T  25237828 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatata 25237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 30529840 - 30529777
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||| || ||||||||| ||||| |||||| ||| ||||||||||||||||||||||    
T  30529840 cacgcttaactatgaagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatata 30529777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 7494031 - 7493971
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||| |||||||||||||| |  || |||||||||| ||||||||||||||||||||||    
T  7494031 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatata 7493971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 25230698 - 25230761
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||    
T  25230698 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatata 25230761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 25238285 - 25238348
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||    
T  25238285 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatata 25238348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 25248264 - 25248201
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||| ||| |||||||| |||| ||||| |||||| ||| ||||||||||||||||||||||    
T  25248264 cacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatata 25248201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 32796936 - 32796991
Alignment:
Q  231 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatata 32796991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 37045188 - 37045125
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||  | ||||  |||||||||||| ||||||||||||    
T  37045188 cacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatata 37045125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 7477341 - 7477281
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||| |||||||||||||| |  || |||||||||| ||||||| ||||||||||||||    
T  7477341 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatata 7477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 8256679 - 8256616
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8256679 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 8256616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 11388340 - 11388277
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  11388340 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 11388277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 29804835 - 29804772
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  29804835 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 29804772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 30966843 - 30966780
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  30966843 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 30966780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 41754442 - 41754379
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  41754442 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 41754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 1912677 - 1912615
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  1912677 cacgcttaactgtggagttcttatggaatgggctaccaaaagaagatgcatcttgttgatata 1912615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 24818479 - 24818416
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  24818479 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatata 24818416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 16379547 - 16379483
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  16379547 acacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatata 16379483  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 33175112 - 33175048
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||    
T  33175112 acacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatata 33175048  T

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Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 33771151 - 33771091
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  33771151 gcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 33771091  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 5399810 - 5399873
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  5399810 cacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatata 5399873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 16379090 - 16379027
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||    
T  16379090 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatata 16379027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 25337990 - 25338053
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  25337990 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatata 25338053  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 30966387 - 30966324
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  30966387 cacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatata 30966324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 33174656 - 33174593
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  33174656 cacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatata 33174593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 25434049 - 25434110
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgata 283  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  25434049 cacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgata 25434110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 18098874 - 18098934
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  18098874 gcttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatata 18098934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 11394686 - 11394624
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  11394686 cacgcttaactgtgaagttcttatggaat-agctaccgaaaagaagatgcatcttgttgatata 11394624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 29259613 - 29259676
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| || |||||||||  |||||||||||| |||||||||||||||||||||||||    
T  29259613 cacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatata 29259676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 30963713 - 30963776
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||| |||| |  || |||||| ||||||||||||||||||||||||||    
T  30963713 cacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatata 30963776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 83171 - 83107
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| |||||||||| ||||||||||||  ||| ||||| |||||||||| ||||    
T  83171 acacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtata 83107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 1707195 - 1707131
Alignment:
Q  222 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    |||| ||||||||||||||||||||   ||| |||||| ||| ||||||||||||||||||||||    
T  1707195 acactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatata 1707131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 38898905 - 38898968
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||| | ||||  |||||| ||||||||||||||||||    
T  38898905 cacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatata 38898968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 32377712 - 32377749
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctaccgaaa 263  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  32377712 gcttaactgtggagttcttttggaatgagctaccgaaa 32377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 107456 - 107518
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatat 284  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  107456 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatat 107518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 4710 - 4651
Alignment:
Q  227 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  4710 cttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatata 4651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 5174 - 5111
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  5174 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatata 5111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 1373 - 1310
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  1373 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatata 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 2895 - 2832
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  2895 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatata 2832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 105873 - 105810
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  105873 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatata 105810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 10453 - 10390
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  10453 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatata 10390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 18128 - 18190
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||    
T  18128 cacgcttaactgtggagttcttatggaattagctaccaaaaaaagatgcatcttgttgatata 18190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 17591 - 17654
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  | |||||||||  ||||||||| |||| ||||||||||    
T  17591 cacgcttaactgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatata 17654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 154910 - 154849
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgata 283  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  154910 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgata 154849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 19119 - 19056
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  19119 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatata 19056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 162671 - 162734
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  162671 cacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 163224 - 163167
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 279  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  163224 cacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatcttgtt 163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 163127 - 163181
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 276  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  163127 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 69814 - 69871
Alignment:
Q  229 taactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||| ||||||||||  | ||| |||||||||| ||||||||||    
T  69814 taactgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatata 69871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 2203 - 2266
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    ||||||||||| | |||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  2203 cacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatata 2266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 14695 - 14749
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 276  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  14695 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 14749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 2255 - 2195
Alignment:
Q  226 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatata 285  Q
    ||||||||||||||||||||  ||||| ||||||  ||||||||||||||||||| |||||    
T  2255 gcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatata 2195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 245228 - 245176
Alignment:
Q  233 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatata 285  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||    
T  245228 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatata 245176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 245668 - 245605
Alignment:
Q  223 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 285  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||    
T  245668 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatata 245605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 26211 - 26160
Alignment:
Q  235 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata 285  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||    
T  26211 tggagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatata 26160  T

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