View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8981_low_245 (Length: 265)
Name: NF8981_low_245
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8981_low_245 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 32718629 - 32718879
Alignment:
| Q |
1 |
tgatgactcactcaatggtgtttctcattcaaaaggtacgaggactgctaaatagtacgaaacagcactcgtggctcatgccttggcaagattagcagaa |
100 |
Q |
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| T |
32718629 |
tgatgactcactcaatggtgtttctcattcaaaaggtacgaggactgctaaatagtacgaaacagcactcgtgtctcatgccttggcaagattagcagaa |
32718728 |
T |
|
| Q |
101 |
agaggtatttcattctcttttatcaattcaaaaaattgttaattatgaaaaaagacacaagaaaggaataaaagtgttgataagttatatatttttcatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32718729 |
agaggtatttcattctcttttatcaattcaaaaaattgttaattatgaaaaaagacacaagaaaggaataaaagtgttgataagttatatatttttcatt |
32718828 |
T |
|
| Q |
201 |
tattagatg-tgtcatgtcataacacattcattggattgtatatataaatt |
250 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
32718829 |
tattagatgatgtcatgtcataacacattcattggattgtatatataaatt |
32718879 |
T |
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