View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8981_low_252 (Length: 254)
Name: NF8981_low_252
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8981_low_252 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 25788752 - 25788887
Alignment:
| Q |
1 |
tctttccaataatttcatctcaaatttggaaagaccctttgatgatctcaattccaatctatatagccttgaccttcattccaataaacttgttggaaaa |
100 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25788752 |
tctttccaataatttcatcacagatttggaaagaccctttgatgatctcaattccaatctatatagccttgaccttcattccaataaacttgttggaaaa |
25788851 |
T |
|
| Q |
101 |
attcctactttcacgaaatatgctgtccgtttggac |
136 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
25788852 |
attcctactttcatgaaatatgctgtccatttggac |
25788887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University