View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8981_low_269 (Length: 248)
Name: NF8981_low_269
Description: NF8981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8981_low_269 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 15288608 - 15288793
Alignment:
| Q |
46 |
gaaactctgaaccattttcgccaagcaaacagagcttggttccaactcagcaactccaccagcaccatctttagtggtattgttcttcggaaaaggtttc |
145 |
Q |
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| T |
15288608 |
gaaactttgaaccattttcgccaagcaaacagagcttggttccaactcagcaactccaccagcaccatctttagtggtattgttcttcggaaaaggtttc |
15288707 |
T |
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| Q |
146 |
tcgaaagcgaaaaacctcttcaacctccatttcgaaactggttcatttcgaaccagttccgtagtggctttctctgaatcgatgtc |
231 |
Q |
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| T |
15288708 |
tcgaaagcgaaaaacctcttcaacctccacttcgaaactggttcatttcgaaccagttccgtagtggctttctctgaatctatgtc |
15288793 |
T |
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