View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8983_high_19 (Length: 230)
Name: NF8983_high_19
Description: NF8983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8983_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 9691628 - 9691429
Alignment:
| Q |
14 |
tggtgtttgatgaattaaatgtggctcttgacaaaactttcaatatcaaaactcaggcctaactggttgcaaactagtcgtcaatacacatcttgatcct |
113 |
Q |
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| T |
9691628 |
tggtgtttgatgaattaaatgtggctcttgacaaaactttcaatatcaaaactcaggcctaactggttgcaaactagtcgtcaatacacatcttgatcct |
9691529 |
T |
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| Q |
114 |
tctcttcggttgcatcaagatggaggatctgcatacacactaaagctaccatgccttgttcatttatgattgtattctcaagcttgtatacatctactaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9691528 |
tctcttcggttgcatcaagatggaggatctgcatacacactaaagctaccatgccttgttcatttatgattgtattctcaagcttgtatacatctactaa |
9691429 |
T |
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