View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8983_low_6 (Length: 637)

Name: NF8983_low_6
Description: NF8983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8983_low_6
NF8983_low_6
[»] chr3 (88 HSPs)
chr3 (22-327)||(1509637-1509950)
chr3 (288-553)||(1509378-1509643)
chr3 (283-392)||(34910317-34910431)
chr3 (333-418)||(51206353-51206439)
chr3 (283-392)||(55401075-55401189)
chr3 (283-392)||(3163976-3164084)
chr3 (301-392)||(14747561-14747653)
chr3 (336-394)||(26508108-26508166)
chr3 (283-392)||(4990917-4991026)
chr3 (324-392)||(4987282-4987350)
chr3 (283-392)||(27505246-27505365)
chr3 (332-392)||(28918001-28918061)
chr3 (317-392)||(14209113-14209188)
chr3 (283-394)||(33359759-33359869)
chr3 (334-392)||(10268487-10268545)
chr3 (332-393)||(21256985-21257046)
chr3 (327-392)||(49651780-49651845)
chr3 (333-392)||(8587021-8587080)
chr3 (333-392)||(10954952-10955011)
chr3 (317-392)||(15796278-15796353)
chr3 (333-392)||(21479118-21479177)
chr3 (317-392)||(28812515-28812590)
chr3 (333-403)||(7928439-7928509)
chr3 (283-384)||(25775516-25775621)
chr3 (317-420)||(14832074-14832174)
chr3 (335-392)||(55212963-55213020)
chr3 (324-392)||(14829690-14829757)
chr3 (332-392)||(34185122-34185182)
chr3 (333-392)||(10335286-10335345)
chr3 (283-422)||(20503427-20503579)
chr3 (327-386)||(25948881-25948940)
chr3 (333-393)||(8593135-8593196)
chr3 (283-391)||(11610522-11610623)
chr3 (339-392)||(35994744-35994796)
chr3 (317-390)||(41961634-41961707)
chr3 (332-384)||(39756244-39756296)
chr3 (317-392)||(750602-750677)
chr3 (282-391)||(3610634-3610742)
chr3 (333-392)||(8383257-8383316)
chr3 (349-392)||(14979181-14979224)
chr3 (332-395)||(15314875-15314938)
chr3 (333-392)||(16000016-16000075)
chr3 (333-392)||(26492205-26492264)
chr3 (348-398)||(11313815-11313865)
chr3 (332-386)||(11665950-11666004)
chr3 (318-391)||(8039820-8039893)
chr3 (333-386)||(49505154-49505207)
chr3 (332-392)||(14216892-14216952)
chr3 (332-392)||(14223021-14223081)
chr3 (348-392)||(25064909-25064953)
chr3 (348-392)||(27277853-27277897)
chr3 (283-327)||(34185057-34185101)
chr3 (333-420)||(45451524-45451612)
chr3 (333-392)||(10318035-10318093)
chr3 (348-399)||(11251971-11252022)
chr3 (318-385)||(17005604-17005671)
chr3 (339-394)||(34307786-34307841)
chr3 (283-392)||(40993280-40993395)
chr3 (338-392)||(1514617-1514671)
chr3 (317-391)||(1550141-1550215)
chr3 (316-386)||(28678309-28678379)
chr3 (333-392)||(32400708-32400764)
chr3 (333-386)||(38731224-38731277)
chr3 (359-392)||(40052332-40052365)
chr3 (348-384)||(4201404-4201440)
chr3 (287-327)||(4987229-4987269)
chr3 (333-397)||(8789550-8789614)
chr3 (317-397)||(16192734-16192814)
chr3 (348-420)||(23870574-23870649)
chr3 (348-384)||(32804555-32804591)
chr3 (283-327)||(40052382-40052426)
chr3 (326-385)||(9800047-9800106)
chr3 (341-384)||(17568691-17568734)
chr3 (286-385)||(18426956-18427060)
chr3 (334-376)||(3865690-3865732)
chr3 (285-327)||(15999957-15999999)
chr3 (325-375)||(17276742-17276792)
chr3 (339-385)||(29508451-29508497)
chr3 (273-327)||(41961574-41961628)
chr3 (339-384)||(5339116-5339161)
chr3 (333-398)||(7614415-7614480)
chr3 (348-393)||(9624640-9624685)
chr3 (333-385)||(11143244-11143301)
chr3 (332-397)||(25211534-25211599)
chr3 (348-392)||(10690277-10690321)
chr3 (327-386)||(11155030-11155094)
chr3 (333-420)||(13845525-13845613)
chr3 (283-327)||(24204986-24205030)
[»] chr8 (79 HSPs)
chr8 (283-398)||(8342966-8343081)
chr8 (283-398)||(25566835-25566944)
chr8 (283-392)||(13436915-13437023)
chr8 (317-392)||(2572040-2572115)
chr8 (283-392)||(5813592-5813706)
chr8 (317-392)||(15816113-15816188)
chr8 (317-392)||(22651976-22652051)
chr8 (332-397)||(8343311-8343376)
chr8 (333-384)||(20873077-20873128)
chr8 (317-392)||(29510288-29510363)
chr8 (334-392)||(4298887-4298945)
chr8 (334-391)||(22197743-22197800)
chr8 (333-385)||(4948659-4948711)
chr8 (333-397)||(24613516-24613579)
chr8 (317-403)||(21465401-21465487)
chr8 (283-392)||(36450699-36450813)
chr8 (335-403)||(40332180-40332248)
chr8 (333-392)||(22595994-22596053)
chr8 (317-392)||(29447094-29447169)
chr8 (333-388)||(30077387-30077442)
chr8 (339-392)||(18407719-18407772)
chr8 (339-392)||(41831946-41831999)
chr8 (332-392)||(30271290-30271350)
chr8 (308-391)||(7442846-7442929)
chr8 (333-392)||(13844596-13844655)
chr8 (348-403)||(14731701-14731756)
chr8 (317-392)||(28745498-28745573)
chr8 (334-392)||(31556997-31557054)
chr8 (323-384)||(11927076-11927137)
chr8 (333-394)||(24669431-24669492)
chr8 (335-399)||(31514865-31514930)
chr8 (322-391)||(35519796-35519865)
chr8 (341-398)||(44694785-44694842)
chr8 (333-420)||(3025523-3025610)
chr8 (336-392)||(25192350-25192406)
chr8 (348-392)||(39954294-39954338)
chr8 (327-398)||(16641968-16642039)
chr8 (334-385)||(20679396-20679447)
chr8 (321-392)||(24362190-24362261)
chr8 (333-392)||(27101515-27101573)
chr8 (333-384)||(33405384-33405435)
chr8 (333-392)||(34897085-34897144)
chr8 (341-392)||(41838131-41838182)
chr8 (334-392)||(4673426-4673484)
chr8 (332-394)||(25172697-25172759)
chr8 (332-384)||(16867204-16867259)
chr8 (332-384)||(11944673-11944725)
chr8 (332-392)||(17468507-17468567)
chr8 (283-327)||(22197676-22197720)
chr8 (283-327)||(22652057-22652101)
chr8 (283-327)||(29447525-29447569)
chr8 (336-392)||(31236580-31236636)
chr8 (328-392)||(36934670-36934734)
chr8 (333-384)||(4786338-4786389)
chr8 (283-326)||(11803341-11803384)
chr8 (334-385)||(14134706-14134757)
chr8 (333-380)||(18170482-18170529)
chr8 (333-380)||(18634050-18634097)
chr8 (291-385)||(7472474-7472567)
chr8 (335-397)||(11803254-11803316)
chr8 (334-392)||(12606830-12606888)
chr8 (350-384)||(13018289-13018323)
chr8 (327-392)||(24858009-24858076)
chr8 (348-397)||(4611529-4611578)
chr8 (333-393)||(10002163-10002224)
chr8 (290-327)||(22943301-22943338)
chr8 (317-385)||(27067284-27067350)
chr8 (337-386)||(34222953-34223002)
chr8 (333-385)||(926788-926840)
chr8 (283-327)||(8343397-8343441)
chr8 (317-393)||(12570493-12570568)
chr8 (283-323)||(17751730-17751770)
chr8 (283-323)||(17760717-17760757)
chr8 (353-393)||(18067954-18067994)
chr8 (286-326)||(24205756-24205796)
chr8 (332-372)||(26902174-26902214)
chr8 (332-384)||(28383829-28383881)
chr8 (317-369)||(29447467-29447519)
chr8 (283-327)||(44067597-44067641)
[»] chr4 (83 HSPs)
chr4 (283-387)||(11596302-11596406)
chr4 (283-392)||(23292931-23293045)
chr4 (333-420)||(28964248-28964337)
chr4 (333-397)||(2361975-2362039)
chr4 (283-392)||(3947706-3947825)
chr4 (283-385)||(4383375-4383480)
chr4 (333-392)||(21945503-21945562)
chr4 (283-392)||(28084521-28084638)
chr4 (323-398)||(51701252-51701327)
chr4 (283-392)||(42640526-42640638)
chr4 (333-399)||(54580023-54580089)
chr4 (333-398)||(4157144-4157208)
chr4 (283-384)||(5775309-5775409)
chr4 (335-384)||(6485613-6485662)
chr4 (283-403)||(37203253-37203366)
chr4 (335-391)||(29205445-29205501)
chr4 (283-392)||(12708146-12708256)
chr4 (327-389)||(12895110-12895172)
chr4 (332-392)||(30298946-30299007)
chr4 (332-392)||(30327814-30327875)
chr4 (285-392)||(8423665-8423777)
chr4 (333-392)||(49431025-49431085)
chr4 (283-397)||(715550-715672)
chr4 (283-397)||(752876-752998)
chr4 (333-384)||(12895274-12895325)
chr4 (317-392)||(24613685-24613760)
chr4 (334-385)||(35157986-35158037)
chr4 (333-392)||(38847012-38847071)
chr4 (283-392)||(3712458-3712568)
chr4 (326-392)||(19482668-19482734)
chr4 (317-386)||(30982862-30982931)
chr4 (332-397)||(31800477-31800542)
chr4 (333-385)||(12797338-12797389)
chr4 (332-384)||(16303265-16303317)
chr4 (317-420)||(22234874-22234981)
chr4 (332-384)||(27706176-27706228)
chr4 (333-392)||(34306804-34306862)
chr4 (332-392)||(50280881-50280943)
chr4 (333-378)||(6879465-6879510)
chr4 (333-373)||(4157455-4157495)
chr4 (341-392)||(11651142-11651193)
chr4 (333-392)||(15029765-15029824)
chr4 (333-384)||(16073403-16073453)
chr4 (323-386)||(30838216-30838279)
chr4 (317-384)||(40742599-40742666)
chr4 (334-392)||(47263986-47264044)
chr4 (317-386)||(847957-848026)
chr4 (346-391)||(14465088-14465133)
chr4 (332-392)||(13134450-13134510)
chr4 (283-327)||(18513180-18513224)
chr4 (302-382)||(18576007-18576086)
chr4 (283-327)||(24343583-24343627)
chr4 (334-386)||(33950142-33950194)
chr4 (333-377)||(36409512-36409556)
chr4 (333-377)||(36423678-36423722)
chr4 (341-385)||(40481644-40481687)
chr4 (334-385)||(7214523-7214574)
chr4 (323-403)||(19312320-19312404)
chr4 (348-399)||(21873386-21873437)
chr4 (348-399)||(21929247-21929298)
chr4 (334-384)||(28000743-28000794)
chr4 (333-384)||(40179636-40179687)
chr4 (334-384)||(11931288-11931338)
chr4 (348-394)||(24999042-24999088)
chr4 (284-330)||(30094080-30094126)
chr4 (323-392)||(35723374-35723444)
chr4 (338-392)||(40613450-40613504)
chr4 (332-420)||(46083990-46084080)
chr4 (348-385)||(36635331-36635368)
chr4 (283-324)||(53381535-53381576)
chr4 (348-384)||(903930-903966)
chr4 (283-374)||(2625964-2626056)
chr4 (333-377)||(10499270-10499314)
chr4 (318-374)||(11797613-11797669)
chr4 (340-384)||(14126118-14126162)
chr4 (327-391)||(15659754-15659818)
chr4 (337-385)||(21658818-21658866)
chr4 (283-327)||(22440562-22440606)
chr4 (348-384)||(22440615-22440651)
chr4 (283-327)||(30982812-30982856)
chr4 (332-392)||(38148724-38148784)
chr4 (348-384)||(44081592-44081628)
chr4 (348-392)||(56257933-56257977)
[»] chr1 (117 HSPs)
chr1 (283-392)||(113299-113407)
chr1 (283-394)||(1486649-1486770)
chr1 (283-397)||(1704940-1705056)
chr1 (333-392)||(22515887-22515946)
chr1 (283-394)||(42359394-42359510)
chr1 (283-392)||(22881572-22881675)
chr1 (333-392)||(46348383-46348442)
chr1 (332-394)||(24577185-24577247)
chr1 (333-420)||(18337302-18337388)
chr1 (333-392)||(38078661-38078720)
chr1 (317-384)||(47989505-47989572)
chr1 (334-399)||(40258934-40258999)
chr1 (338-391)||(48450592-48450645)
chr1 (489-537)||(3069516-3069564)
chr1 (317-389)||(6612155-6612227)
chr1 (333-397)||(31672895-31672959)
chr1 (317-417)||(32461448-32461550)
chr1 (323-392)||(17778549-17778615)
chr1 (333-392)||(41877470-41877529)
chr1 (335-397)||(21378573-21378635)
chr1 (317-392)||(31694694-31694771)
chr1 (283-367)||(2218264-2218342)
chr1 (334-395)||(18190109-18190170)
chr1 (323-392)||(18556446-18556515)
chr1 (332-393)||(25272481-25272542)
chr1 (317-394)||(28273072-28273149)
chr1 (338-391)||(31015044-31015097)
chr1 (324-392)||(40917751-40917817)
chr1 (340-392)||(14359529-14359580)
chr1 (317-373)||(15449216-15449272)
chr1 (284-382)||(44482240-44482335)
chr1 (333-392)||(51410024-51410084)
chr1 (333-392)||(9103640-9103698)
chr1 (333-392)||(19058856-19058915)
chr1 (283-392)||(5376452-5376559)
chr1 (333-391)||(5927340-5927398)
chr1 (323-397)||(6332666-6332739)
chr1 (332-390)||(5944283-5944343)
chr1 (283-385)||(7918159-7918263)
chr1 (283-392)||(37598832-37598945)
chr1 (283-392)||(48040419-48040521)
chr1 (341-392)||(13011223-13011275)
chr1 (323-399)||(34371707-34371782)
chr1 (317-392)||(9629884-9629959)
chr1 (349-422)||(12443476-12443546)
chr1 (333-403)||(29229450-29229521)
chr1 (333-392)||(35702588-35702647)
chr1 (333-420)||(40181848-40181930)
chr1 (286-384)||(1815265-1815368)
chr1 (335-397)||(1864882-1864944)
chr1 (283-385)||(10572539-10572641)
chr1 (337-392)||(18471298-18471355)
chr1 (334-392)||(36878461-36878519)
chr1 (283-392)||(5898211-5898325)
chr1 (340-389)||(15323166-15323215)
chr1 (335-392)||(23738678-23738735)
chr1 (317-382)||(25361896-25361961)
chr1 (335-392)||(32434718-32434775)
chr1 (283-374)||(35919231-35919317)
chr1 (348-392)||(398780-398824)
chr1 (324-419)||(8010278-8010374)
chr1 (317-385)||(9828051-9828119)
chr1 (333-385)||(14332642-14332694)
chr1 (283-386)||(34712328-34712436)
chr1 (339-382)||(30359398-30359441)
chr1 (343-386)||(37055866-37055909)
chr1 (333-392)||(39953146-39953205)
chr1 (324-386)||(27471557-27471619)
chr1 (43-124)||(3069362-3069438)
chr1 (324-397)||(17754306-17754379)
chr1 (333-397)||(24334705-24334770)
chr1 (283-327)||(6427545-6427589)
chr1 (283-327)||(9828125-9828169)
chr1 (348-384)||(16164330-16164366)
chr1 (283-327)||(16297226-16297270)
chr1 (332-392)||(20157349-20157409)
chr1 (283-327)||(29144325-29144369)
chr1 (340-392)||(29144365-29144417)
chr1 (283-327)||(40917830-40917874)
chr1 (283-327)||(46940753-46940797)
chr1 (336-399)||(52284695-52284759)
chr1 (332-391)||(6427351-6427410)
chr1 (345-392)||(16297295-16297342)
chr1 (348-387)||(16927200-16927239)
chr1 (333-384)||(21530697-21530748)
chr1 (283-322)||(31694644-31694683)
chr1 (334-397)||(38503315-38503378)
chr1 (332-382)||(2283676-2283726)
chr1 (333-391)||(9709821-9709879)
chr1 (351-397)||(23652994-23653040)
chr1 (332-374)||(28663626-28663668)
chr1 (332-374)||(30173761-30173803)
chr1 (359-392)||(1262884-1262917)
chr1 (339-392)||(3490396-3490449)
chr1 (332-392)||(6427461-6427524)
chr1 (333-386)||(7353493-7353546)
chr1 (341-386)||(11605943-11605988)
chr1 (348-385)||(12713342-12713379)
chr1 (348-385)||(12717433-12717470)
chr1 (335-384)||(13997891-13997940)
chr1 (283-324)||(16812629-16812670)
chr1 (283-324)||(21365997-21366038)
chr1 (333-374)||(21620973-21621014)
chr1 (283-324)||(22515832-22515873)
chr1 (335-397)||(26526758-26526822)
chr1 (282-327)||(26830657-26830702)
chr1 (348-385)||(34298443-34298480)
chr1 (352-392)||(2896140-2896180)
chr1 (334-391)||(8117031-8117092)
chr1 (283-327)||(10233326-10233370)
chr1 (350-394)||(12611964-12612008)
chr1 (348-392)||(19324562-19324606)
chr1 (317-397)||(21032202-21032281)
chr1 (348-392)||(25098570-25098614)
chr1 (348-384)||(26837757-26837793)
chr1 (350-394)||(30847737-30847781)
chr1 (348-384)||(34257925-34257961)
[»] chr7 (83 HSPs)
chr7 (318-412)||(26033446-26033541)
chr7 (283-399)||(9778493-9778619)
chr7 (317-392)||(24339642-24339717)
chr7 (283-394)||(5409776-5409897)
chr7 (317-397)||(9408318-9408398)
chr7 (285-388)||(18215144-18215241)
chr7 (283-392)||(11272535-11272647)
chr7 (334-397)||(11061077-11061140)
chr7 (283-392)||(13770691-13770810)
chr7 (333-420)||(19213774-19213862)
chr7 (333-392)||(25481902-25481961)
chr7 (332-397)||(3991319-3991384)
chr7 (323-392)||(7438706-7438775)
chr7 (283-388)||(43027409-43027524)
chr7 (317-392)||(11831432-11831507)
chr7 (332-420)||(19991971-19992061)
chr7 (332-420)||(7058397-7058486)
chr7 (324-384)||(18039006-18039067)
chr7 (283-392)||(40287307-40287415)
chr7 (332-384)||(2334256-2334310)
chr7 (323-394)||(11665430-11665501)
chr7 (333-392)||(15680809-15680868)
chr7 (323-374)||(21560521-21560572)
chr7 (333-397)||(21864801-21864867)
chr7 (333-386)||(21880158-21880211)
chr7 (332-385)||(27945048-27945101)
chr7 (327-391)||(32094014-32094079)
chr7 (333-397)||(8234141-8234205)
chr7 (323-395)||(13300407-13300479)
chr7 (333-392)||(7197297-7197356)
chr7 (323-398)||(8160410-8160485)
chr7 (317-384)||(15902830-15902897)
chr7 (333-392)||(24105678-24105737)
chr7 (317-392)||(25822655-25822730)
chr7 (335-421)||(27093415-27093502)
chr7 (335-421)||(27184799-27184886)
chr7 (333-392)||(28155570-28155629)
chr7 (332-386)||(7328690-7328744)
chr7 (333-386)||(3721099-3721152)
chr7 (323-384)||(6028633-6028694)
chr7 (283-384)||(1433462-1433573)
chr7 (327-399)||(11890913-11890985)
chr7 (333-397)||(20549786-20549850)
chr7 (324-392)||(32308120-32308188)
chr7 (332-392)||(35861964-35862024)
chr7 (283-330)||(6490783-6490830)
chr7 (327-398)||(16341490-16341561)
chr7 (333-392)||(26733304-26733363)
chr7 (334-393)||(42720891-42720950)
chr7 (316-378)||(1885587-1885649)
chr7 (334-384)||(38143231-38143281)
chr7 (283-392)||(598208-598322)
chr7 (332-385)||(10042944-10042997)
chr7 (283-392)||(32287408-32287522)
chr7 (335-392)||(41020496-41020553)
chr7 (334-386)||(1401031-1401083)
chr7 (345-385)||(5954254-5954294)
chr7 (332-372)||(27229310-27229350)
chr7 (348-392)||(29787384-29787428)
chr7 (283-372)||(35749916-35750001)
chr7 (334-378)||(48438560-48438604)
chr7 (333-372)||(18213033-18213072)
chr7 (332-379)||(22602709-22602756)
chr7 (317-384)||(26329366-26329433)
chr7 (334-381)||(33994223-33994270)
chr7 (348-386)||(2424620-2424658)
chr7 (334-392)||(19206050-19206108)
chr7 (346-392)||(23191896-23191942)
chr7 (281-327)||(43250074-43250120)
chr7 (335-384)||(5233637-5233686)
chr7 (335-413)||(7973125-7973205)
chr7 (333-382)||(9482944-9482993)
chr7 (283-324)||(24339726-24339767)
chr7 (346-391)||(29763187-29763232)
chr7 (341-386)||(30813818-30813863)
chr7 (332-397)||(49107816-49107880)
chr7 (336-392)||(2948683-2948739)
chr7 (317-385)||(6630896-6630964)
chr7 (342-374)||(13557750-13557782)
chr7 (287-327)||(14729773-14729813)
chr7 (283-327)||(29763134-29763178)
chr7 (321-392)||(30731037-30731106)
chr7 (283-327)||(30813867-30813911)
[»] chr5 (80 HSPs)
chr5 (283-397)||(21351855-21351969)
chr5 (317-420)||(39698510-39698616)
chr5 (283-392)||(21191001-21191115)
chr5 (317-392)||(7677705-7677780)
chr5 (317-392)||(19579701-19579776)
chr5 (338-392)||(14674269-14674323)
chr5 (286-420)||(17088253-17088402)
chr5 (283-391)||(21576690-21576803)
chr5 (333-420)||(33177996-33178084)
chr5 (333-392)||(6247622-6247681)
chr5 (317-392)||(21522750-21522825)
chr5 (317-392)||(21533316-21533391)
chr5 (334-397)||(42893355-42893418)
chr5 (283-392)||(41995471-41995578)
chr5 (327-392)||(31084323-31084388)
chr5 (332-392)||(13287398-13287458)
chr5 (317-397)||(37328828-37328908)
chr5 (324-392)||(41633735-41633803)
chr5 (317-392)||(21542030-21542105)
chr5 (327-412)||(5894827-5894912)
chr5 (332-399)||(6471888-6471955)
chr5 (333-392)||(8420027-8420086)
chr5 (317-391)||(36838544-36838619)
chr5 (283-382)||(43564891-43564995)
chr5 (337-391)||(24906305-24906359)
chr5 (327-392)||(10298569-10298634)
chr5 (340-397)||(15405062-15405119)
chr5 (333-392)||(15883987-15884047)
chr5 (335-391)||(17177025-17177081)
chr5 (317-397)||(40131616-40131696)
chr5 (336-392)||(43001800-43001856)
chr5 (317-392)||(3966503-3966578)
chr5 (337-392)||(7218271-7218326)
chr5 (317-392)||(11685939-11686013)
chr5 (333-392)||(16203795-16203854)
chr5 (318-392)||(19552530-19552602)
chr5 (283-382)||(14873527-14873636)
chr5 (333-392)||(15382477-15382538)
chr5 (283-384)||(19429440-19429541)
chr5 (348-392)||(22013414-22013458)
chr5 (332-392)||(30183549-30183609)
chr5 (332-420)||(39205849-39205940)
chr5 (339-391)||(131762-131816)
chr5 (284-392)||(6035483-6035592)
chr5 (337-392)||(12159952-12160007)
chr5 (317-384)||(12641682-12641749)
chr5 (283-326)||(19820333-19820376)
chr5 (333-384)||(28588674-28588725)
chr5 (334-392)||(30135313-30135372)
chr5 (317-392)||(36642746-36642821)
chr5 (337-420)||(39758244-39758327)
chr5 (332-403)||(41091256-41091327)
chr5 (283-392)||(2436922-2437025)
chr5 (348-398)||(24273045-24273095)
chr5 (348-398)||(24389119-24389169)
chr5 (333-391)||(30502388-30502446)
chr5 (333-391)||(30542731-30542789)
chr5 (283-385)||(4105264-4105373)
chr5 (283-394)||(22423769-22423873)
chr5 (335-392)||(23220983-23221040)
chr5 (348-385)||(35017044-35017081)
chr5 (348-392)||(27144463-27144507)
chr5 (283-327)||(39268543-39268587)
chr5 (317-392)||(21814261-21814336)
chr5 (335-386)||(23012410-23012461)
chr5 (345-392)||(27932235-27932282)
chr5 (340-386)||(6326304-6326350)
chr5 (332-374)||(12199948-12199990)
chr5 (348-386)||(12927660-12927698)
chr5 (339-384)||(5467984-5468029)
chr5 (352-397)||(6770538-6770583)
chr5 (333-389)||(14422907-14422961)
chr5 (344-397)||(22299492-22299544)
chr5 (283-383)||(39695956-39696049)
chr5 (352-395)||(2952265-2952309)
chr5 (350-394)||(4344740-4344784)
chr5 (290-326)||(15382556-15382592)
chr5 (332-384)||(16374341-16374393)
chr5 (323-399)||(32766933-32767009)
chr5 (283-327)||(35017113-35017157)
[»] chr6 (107 HSPs)
chr6 (317-392)||(16766697-16766772)
chr6 (287-391)||(21395262-21395365)
chr6 (317-392)||(9107354-9107429)
chr6 (283-390)||(31959161-31959264)
chr6 (283-392)||(17841534-17841648)
chr6 (285-384)||(7930313-7930413)
chr6 (283-392)||(9025450-9025553)
chr6 (333-399)||(28715288-28715354)
chr6 (283-392)||(34595134-34595248)
chr6 (317-392)||(5970092-5970167)
chr6 (333-392)||(7977830-7977889)
chr6 (332-391)||(10770673-10770732)
chr6 (333-399)||(403864-403929)
chr6 (334-392)||(7938116-7938174)
chr6 (327-392)||(12696324-12696389)
chr6 (333-392)||(3209381-3209441)
chr6 (333-392)||(426514-426573)
chr6 (333-392)||(853859-853918)
chr6 (333-392)||(7801156-7801215)
chr6 (317-392)||(8365503-8365578)
chr6 (323-385)||(9522898-9522960)
chr6 (274-397)||(4877937-4878065)
chr6 (335-392)||(16833308-16833365)
chr6 (283-392)||(28152099-28152212)
chr6 (332-385)||(31384927-31384980)
chr6 (317-392)||(8713979-8714055)
chr6 (332-391)||(9911527-9911587)
chr6 (333-392)||(32978899-32978959)
chr6 (333-392)||(8776973-8777032)
chr6 (339-392)||(1191706-1191759)
chr6 (339-392)||(1681758-1681811)
chr6 (333-394)||(6898281-6898342)
chr6 (317-385)||(9195738-9195806)
chr6 (317-393)||(25038055-25038131)
chr6 (283-394)||(32511611-32511727)
chr6 (348-400)||(34225824-34225876)
chr6 (335-386)||(7086801-7086852)
chr6 (334-392)||(24645480-24645539)
chr6 (333-392)||(33001289-33001348)
chr6 (333-391)||(7265593-7265651)
chr6 (350-392)||(10842532-10842574)
chr6 (334-392)||(15489733-15489791)
chr6 (332-385)||(7151419-7151472)
chr6 (343-392)||(25010212-25010261)
chr6 (323-392)||(26562689-26562758)
chr6 (332-392)||(3398619-3398678)
chr6 (333-393)||(6327518-6327578)
chr6 (332-384)||(18252750-18252802)
chr6 (341-384)||(4118341-4118384)
chr6 (333-384)||(5732510-5732561)
chr6 (317-384)||(9617442-9617509)
chr6 (283-326)||(10339059-10339102)
chr6 (340-394)||(17302554-17302609)
chr6 (341-392)||(17435199-17435250)
chr6 (333-392)||(19040352-19040411)
chr6 (323-386)||(34073337-34073400)
chr6 (302-392)||(34290048-34290136)
chr6 (283-329)||(8389413-8389459)
chr6 (348-386)||(8805587-8805625)
chr6 (291-392)||(9027178-9027273)
chr6 (335-385)||(26178683-26178733)
chr6 (283-384)||(28862129-28862231)
chr6 (333-382)||(1700362-1700411)
chr6 (332-381)||(7973665-7973714)
chr6 (323-392)||(8931592-8931661)
chr6 (317-394)||(24115831-24115908)
chr6 (283-392)||(7723204-7723309)
chr6 (348-392)||(10888989-10889033)
chr6 (283-392)||(17327595-17327714)
chr6 (340-384)||(17341671-17341715)
chr6 (345-388)||(2224230-2224273)
chr6 (348-403)||(5462675-5462730)
chr6 (333-392)||(7377979-7378038)
chr6 (283-330)||(7938167-7938214)
chr6 (333-392)||(7996378-7996437)
chr6 (333-392)||(8022364-8022423)
chr6 (333-392)||(9629383-9629442)
chr6 (348-383)||(16388248-16388283)
chr6 (317-392)||(16488574-16488649)
chr6 (317-392)||(18367836-18367911)
chr6 (333-392)||(21924935-21924994)
chr6 (346-385)||(25096430-25096469)
chr6 (334-388)||(31429004-31429059)
chr6 (339-385)||(2117083-2117129)
chr6 (332-386)||(6214566-6214620)
chr6 (333-382)||(7027251-7027301)
chr6 (323-385)||(10827551-10827613)
chr6 (332-382)||(14784931-14784981)
chr6 (327-385)||(16111751-16111809)
chr6 (283-321)||(26178623-26178661)
chr6 (283-384)||(7625130-7625230)
chr6 (335-392)||(9658879-9658936)
chr6 (333-398)||(14155239-14155304)
chr6 (335-392)||(24138426-24138483)
chr6 (333-374)||(26402680-26402721)
chr6 (334-392)||(27904037-27904097)
chr6 (338-391)||(30866149-30866202)
chr6 (283-327)||(7248439-7248483)
chr6 (283-327)||(8776913-8776957)
chr6 (333-385)||(12627577-12627629)
chr6 (283-327)||(16766778-16766822)
chr6 (348-392)||(17302347-17302391)
chr6 (361-397)||(19147431-19147467)
chr6 (283-327)||(31385000-31385044)
chr6 (348-384)||(31579240-31579276)
chr6 (318-382)||(33340370-33340434)
chr6 (318-382)||(35125664-35125728)
[»] chr2 (77 HSPs)
chr2 (283-394)||(2438664-2438780)
chr2 (282-384)||(23058388-23058494)
chr2 (283-392)||(37558977-37559091)
chr2 (332-392)||(20539673-20539733)
chr2 (283-394)||(18840958-18841074)
chr2 (317-392)||(30717514-30717589)
chr2 (317-394)||(11223847-11223924)
chr2 (290-392)||(14996171-14996283)
chr2 (333-397)||(18255980-18256044)
chr2 (333-392)||(30335417-30335476)
chr2 (317-383)||(37419752-37419818)
chr2 (283-392)||(38117104-38117218)
chr2 (332-392)||(974747-974807)
chr2 (333-392)||(19536397-19536457)
chr2 (340-392)||(21374706-21374758)
chr2 (285-392)||(21624266-21624374)
chr2 (326-385)||(12668416-12668475)
chr2 (333-384)||(30404850-30404901)
chr2 (332-399)||(44860313-44860380)
chr2 (317-386)||(4882680-4882749)
chr2 (332-385)||(15657871-15657924)
chr2 (332-392)||(36756343-36756403)
chr2 (333-389)||(5040735-5040793)
chr2 (337-392)||(6940255-6940310)
chr2 (333-384)||(15972881-15972932)
chr2 (333-384)||(18421971-18422022)
chr2 (283-385)||(18622613-18622716)
chr2 (317-392)||(26769511-26769586)
chr2 (339-393)||(12940941-12940995)
chr2 (283-399)||(18631356-18631473)
chr2 (327-392)||(24894389-24894454)
chr2 (332-385)||(33153431-33153484)
chr2 (317-397)||(4207852-4207931)
chr2 (348-392)||(28677909-28677953)
chr2 (317-397)||(34784966-34785046)
chr2 (348-392)||(36409642-36409686)
chr2 (283-327)||(37419824-37419868)
chr2 (340-392)||(39323264-39323316)
chr2 (283-370)||(44635520-44635607)
chr2 (333-392)||(20473322-20473381)
chr2 (317-392)||(34337165-34337235)
chr2 (334-397)||(42832277-42832340)
chr2 (333-391)||(31018591-31018649)
chr2 (336-397)||(23718021-23718082)
chr2 (336-397)||(24105693-24105754)
chr2 (335-392)||(29176495-29176552)
chr2 (326-371)||(29367337-29367382)
chr2 (333-386)||(34691805-34691858)
chr2 (333-386)||(34714217-34714270)
chr2 (333-385)||(5367199-5367251)
chr2 (335-391)||(18420436-18420492)
chr2 (348-392)||(21616762-21616806)
chr2 (348-392)||(21782833-21782877)
chr2 (283-327)||(26769592-26769636)
chr2 (332-384)||(30527594-30527646)
chr2 (348-384)||(40361769-40361805)
chr2 (283-326)||(11223798-11223841)
chr2 (334-397)||(21091718-21091781)
chr2 (333-392)||(37411244-37411303)
chr2 (334-392)||(18276521-18276579)
chr2 (335-397)||(31808072-31808134)
chr2 (338-392)||(34221502-34221556)
chr2 (350-384)||(36281693-36281727)
chr2 (348-385)||(2665903-2665940)
chr2 (357-386)||(3415014-3415043)
chr2 (333-387)||(12224226-12224282)
chr2 (359-420)||(27084231-27084295)
chr2 (333-390)||(38442309-38442366)
chr2 (335-388)||(39026822-39026875)
chr2 (335-384)||(44605141-44605190)
chr2 (334-386)||(18889592-18889644)
chr2 (283-327)||(19942335-19942379)
chr2 (350-394)||(23354669-23354713)
chr2 (348-384)||(28412358-28412394)
chr2 (317-377)||(35056883-35056943)
chr2 (283-327)||(35056949-35056993)
chr2 (283-327)||(42511327-42511371)
[»] scaffold0011 (1 HSPs)
scaffold0011 (334-394)||(17750-17810)
[»] scaffold0223 (1 HSPs)
scaffold0223 (325-392)||(20172-20239)
[»] scaffold0652 (1 HSPs)
scaffold0652 (283-392)||(407-521)
[»] scaffold0053 (1 HSPs)
scaffold0053 (283-392)||(8798-8912)
[»] scaffold0003 (2 HSPs)
scaffold0003 (317-392)||(241594-241669)
scaffold0003 (283-327)||(241675-241719)
[»] scaffold0722 (1 HSPs)
scaffold0722 (333-392)||(7032-7091)
[»] scaffold0103 (1 HSPs)
scaffold0103 (341-392)||(51811-51862)
[»] scaffold0027 (1 HSPs)
scaffold0027 (333-392)||(46682-46741)
[»] scaffold0025 (1 HSPs)
scaffold0025 (332-397)||(23764-23830)
[»] scaffold0227 (1 HSPs)
scaffold0227 (341-420)||(7319-7402)
[»] scaffold0361 (1 HSPs)
scaffold0361 (283-420)||(14498-14641)
[»] scaffold0021 (1 HSPs)
scaffold0021 (336-392)||(130482-130538)
[»] scaffold0793 (1 HSPs)
scaffold0793 (283-397)||(4826-4948)
[»] scaffold0136 (1 HSPs)
scaffold0136 (317-384)||(3833-3900)
[»] scaffold0050 (1 HSPs)
scaffold0050 (333-392)||(70278-70337)
[»] scaffold0020 (1 HSPs)
scaffold0020 (283-397)||(135268-135376)
[»] scaffold0019 (2 HSPs)
scaffold0019 (317-392)||(71723-71800)
scaffold0019 (283-327)||(71806-71850)
[»] scaffold0008 (1 HSPs)
scaffold0008 (317-391)||(263356-263430)
[»] scaffold0236 (1 HSPs)
scaffold0236 (332-393)||(25767-25828)
[»] scaffold0171 (2 HSPs)
scaffold0171 (317-374)||(23529-23586)
scaffold0171 (327-392)||(23420-23485)
[»] scaffold0044 (1 HSPs)
scaffold0044 (318-383)||(53189-53254)
[»] scaffold0057 (1 HSPs)
scaffold0057 (317-397)||(24020-24099)
[»] scaffold0450 (2 HSPs)
scaffold0450 (317-392)||(8619-8694)
scaffold0450 (283-327)||(8569-8613)
[»] scaffold0306 (1 HSPs)
scaffold0306 (333-392)||(13400-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (333-392)||(21868-21927)
[»] scaffold0066 (1 HSPs)
scaffold0066 (345-392)||(33375-33422)
[»] scaffold0018 (2 HSPs)
scaffold0018 (334-392)||(178819-178878)
scaffold0018 (340-384)||(192256-192300)
[»] scaffold0123 (1 HSPs)
scaffold0123 (324-394)||(44516-44586)
[»] scaffold0004 (3 HSPs)
scaffold0004 (334-391)||(123626-123686)
scaffold0004 (340-392)||(92807-92859)
scaffold0004 (332-380)||(83172-83220)
[»] scaffold0086 (2 HSPs)
scaffold0086 (317-374)||(2946-3003)
scaffold0086 (284-327)||(3009-3052)
[»] scaffold0049 (1 HSPs)
scaffold0049 (334-391)||(63774-63831)
[»] scaffold0036 (1 HSPs)
scaffold0036 (317-385)||(9731-9799)
[»] scaffold0376 (1 HSPs)
scaffold0376 (324-399)||(6305-6380)
[»] scaffold0122 (2 HSPs)
scaffold0122 (333-392)||(8010-8068)
scaffold0122 (281-374)||(7538-7632)
[»] scaffold1528 (1 HSPs)
scaffold1528 (324-397)||(1030-1103)
[»] scaffold0024 (1 HSPs)
scaffold0024 (323-384)||(68232-68293)
[»] scaffold0246 (1 HSPs)
scaffold0246 (341-385)||(19583-19626)
[»] scaffold0697 (1 HSPs)
scaffold0697 (333-384)||(1652-1703)
[»] scaffold0168 (1 HSPs)
scaffold0168 (317-394)||(21041-21118)
[»] scaffold0083 (1 HSPs)
scaffold0083 (333-366)||(45530-45563)


Alignment Details
Target: chr3 (Bit Score: 285; Significance: 1e-159; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 22 - 327
Target Start/End: Complemental strand, 1509950 - 1509637
Alignment:
Q  22 cactataactatgatccataacacacaccaag--------acaccaactctaattttgtataacaaactagaggtgtgttgtgtgtaactgaggggaatt 113  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1509950 cactataactatgatccataacacacaccaagtcaccaagacaccaactctaattttgtataacaaactagaggtgtgttgtgtgtaactgaggggaatt 1509851  T
Q  114 tagtgtcttactgaattgccgttgcaattacacaattgaagtgcagtaaaatacggataaatgcgaccgcaactgtgttgtgataccactgcataaactt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1509850 tagtgtcttactgaattgccgttgcaattacacaattgaagtgcagtaaaatacggataaatgcgaccgcaactgtgttgtgataccactgcataaactt 1509751  T
Q  214 ctaaaaccttatatttatgattgcaattgcataccgcaatttagaactatttgtttaagtatacctaataagcacggacactcctccgattaggcgtgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1509750 ctaaaaccttatatttatgattgcaattgcataccgcaatttagaactatttgtttaagtatacctaataagcacggacactcctccgattaggcgtgta 1509651  T
Q  314 ccggtgtcggacac 327  Q
    ||||||||||||||    
T  1509650 ccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 288 - 553
Target Start/End: Complemental strand, 1509643 - 1509378
Alignment:
Q  288 cggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagct 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1509643 cggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagct 1509544  T
Q  388 gtgtcagtgtcctgtctgtatccgtgcttcataataccattcaactctcaagggaagtggatgcaattcccccttacgatgaaaaagaaagaacggccaa 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1509543 gtgtcagtgtcctgtctgtatccgtgcttcataataccattcaactctcaagggaagtggatgcaattcccccttacgatgaaaaagaaagaacggccaa 1509444  T
Q  488 acacaaatataaagtgaataataatacataccatcttgaagcaacattaagggtttgtttggttgg 553  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1509443 acacaaatataaagtgaataataatacataccatcttgaagcaacattaagggtttgtttggttgg 1509378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 34910431 - 34910317
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcg-----gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||| ||||| ||||||||      |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  34910431 aagcacggacactcctcggattagacgtgtcccggtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaa 34910332  T
Q  378 attattagctgtgtc 392  Q
    |||||||| ||||||    
T  34910331 attattagttgtgtc 34910317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 333 - 418
Target Start/End: Original strand, 51206353 - 51206439
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttca 418  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgtccgtgtccgtatccgagcttca 51206439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 55401189 - 55401075
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||    ||   | ||||||||||||||||||||||||||||||||||||||||||||    
T  55401189 aagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaa 55401090  T
Q  378 attattagctgtgtc 392  Q
    |||||||| ||||||    
T  55401089 attattagttgtgtc 55401075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 3163976 - 3164084
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||| |||||||||||  |||||||||||  ||||||||||||| || |||||| | ||||||||  ||||||| ||||||||||||||||||||||||    
T  3163976 aagcatggacactcctcgaattaggcgtgtctcggtgtcggacac-gacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattat 3164074  T
Q  383 tagctgtgtc 392  Q
    ||||||||||    
T  3164075 tagctgtgtc 3164084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 392
Target Start/End: Complemental strand, 14747653 - 14747561
Alignment:
Q  301 gattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    ||||||||||||  |||||||||| || || ||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14747653 gattaggcgtgtctcggtgtcggatacagacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtc 14747561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 26508166 - 26508108
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcag 26508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 4990917 - 4991026
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| |||||||||||| |  ||||| || ||| | ||||| |||||||||||||||||||| |||||||| ||||| ||||| |||    
T  4990917 aagcacggacactcctcggattaggcgtgtccacgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactat 4991016  T
Q  383 tagctgtgtc 392  Q
    |||| |||||    
T  4991017 tagcggtgtc 4991026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 324 - 392
Target Start/End: Original strand, 4987282 - 4987350
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4987282 acaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 4987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 27505365 - 27505246
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacacc----------gaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||           || |||||||||||||||||||||||||| ||||||||||||||    
T  27505365 aagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttt 27505266  T
Q  373 ttcaaattattagctgtgtc 392  Q
    |  |||||||||||||||||    
T  27505265 taaaaattattagctgtgtc 27505246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 28918061 - 28918001
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  28918061 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtc 28918001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 14209188 - 14209113
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  14209188 gtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtc 14209113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 283 - 394
Target Start/End: Complemental strand, 33359869 - 33359759
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||||  |   |||||| |||||||||| |||||||||| |||||||  ||||||||||||    
T  33359869 aagcacggacactcctccaattagacgtgtcccgatgtcggacatagtc-cgacactgacacttgtatttacactaaaatatgtgaccttttcaaattat 33359771  T
Q  383 tagctgtgtcag 394  Q
    ||||||||||||    
T  33359770 tagctgtgtcag 33359759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 10268487 - 10268545
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtc 10268545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 21256985 - 21257046
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  21256985 acgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtca 21257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 49651780 - 49651845
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtc 49651845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 8587021 - 8587080
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtc 8587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 10955011 - 10954952
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtc 10954952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 15796278 - 15796353
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | |||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  15796278 gtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtc 15796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 21479177 - 21479118
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtc 21479118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 28812590 - 28812515
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||    
T  28812590 gtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtc 28812515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 333 - 403
Target Start/End: Complemental strand, 7928509 - 7928439
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgtcttgtc 7928439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 25775621 - 25775516
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac--cgaaac-gacaccgacacttgtaattacactaaattatgtgatt-ttttcaaa 378  Q
    ||||||| ||||||||| |||||||||||| | ||||||||||||  ||   | |||||||||||||||||||||||| |||||||||||| ||||||||    
T  25775621 aagcacgaacactcctcggattaggcgtgtcctggtgtcggacacgacgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaa 25775522  T
Q  379 ttatta 384  Q
    ||||||    
T  25775521 ttatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 420
Target Start/End: Complemental strand, 14832174 - 14832074
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtctgtatccgtgctt 416  Q
    ||||| || ||||| ||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||| ||   | | |||| ||||||||||||    
T  14832174 gtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatc---ggcgtgtccgtatccgtgctt 14832078  T
Q  417 cata 420  Q
    ||||    
T  14832077 cata 14832074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 55213020 - 55212963
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtc 55212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 14829757 - 14829690
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||    
T  14829757 acaccgacacgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtc 14829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 34185122 - 34185182
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||    
T  34185122 acgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtc 34185182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 10335286 - 10335345
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtc 10335345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 20503579 - 20503427
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca-----ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||     |     | ||||||||||||||||||||||| |||||||| ||||||||||    
T  20503579 aagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaa 20503480  T
Q  378 attattagct--------gtgtcagtgtcctgtctgtatccgtgcttcataat 422  Q
    |||||| | |        ||||||||||| |||| ||||||||||||||||||    
T  20503479 attatttgttgtgtcggcgtgtcagtgtcgtgtccgtatccgtgcttcataat 20503427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 25948881 - 25948940
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||| |||||||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 8593196 - 8593135
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatttttt-caaattattagctgtgtca 393  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtca 8593135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 11610623 - 11610522
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||      |||   ||||||||||| |||||| |||||||||||||||| |||||||    
T  11610623 aagcacggacactcctcagattaggcgtgtcccgatgtcggacac------gactt-gacacttgtaactacactgaattatgtgatttttttaaattat 11610531  T
Q  383 tagctgtgt 391  Q
    |||| ||||    
T  11610530 tagcggtgt 11610522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 35994744 - 35994796
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtc 35994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 41961634 - 41961707
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtg 390  Q
    ||||| || ||||| |||||||||||||||||||||||||  ||| ||||||| ||||||||||||||| ||||    
T  41961634 gtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtg 41961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 39756296 - 39756244
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||||||    
T  39756296 acgacaccgacacttgtaattatattaaattatgtgatttttttaaattatta 39756244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 750602 - 750677
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| || ||||| ||||||||||||||||||||| ||   ||||||||||| ||||||||||||||| ||||||    
T  750602 gtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtc 750677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 3610742 - 3610634
Alignment:
Q  282 taagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacg-acaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    ||||||| |||||| ||| |||||||||||| |  ||||| |||||||| ||| ||| ||||||| ||||||||||| | |||||| ||||||| |||||    
T  3610742 taagcacagacactactcagattaggcgtgtcc--gtgtccgacaccgatacggacaacgacactggtaattacactgagttatgttatttttttaaatt 3610645  T
Q  381 attagctgtgt 391  Q
    |||| ||||||    
T  3610644 attaactgtgt 3610634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 8383316 - 8383257
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||| |||||||||| |||||| ||||||| ||||||||||||| |||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 392
Target Start/End: Complemental strand, 14979224 - 14979181
Alignment:
Q  349 aattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtc 14979181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 395
Target Start/End: Original strand, 15314875 - 15314938
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagt 395  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||| ||  |||||||||    
T  15314875 acgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcagt 15314938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 16000016 - 16000075
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| |||||||||| ||||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtc 16000075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 26492205 - 26492264
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| ||||||||||||||| |||| | |||||||||||||||||||||| ||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtc 26492264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 11313815 - 11313865
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcggtgtc 11313865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 11666004 - 11665950
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||    
T  11666004 acgacaccgacacatataattacactaaattgtgtgattttatcaaattattagc 11665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 8039820 - 8039893
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||| |||||||| ||||||||||||| | |||||||||| |||||| | ||||| ||||||||||||| ||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 49505154 - 49505207
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||| ||||| | ||||||||||||||||||||||||| |||||||||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 14216952 - 14216892
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||||||||||||| |||||| |||| |||| |||||||||| ||||||    
T  14216952 acgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtc 14216892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 14223081 - 14223021
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||||||||||||| |||||| |||| |||| |||||||||| ||||||    
T  14223081 acgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtc 14223021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 25064953 - 25064909
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtc 25064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 27277853 - 27277897
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 34185057 - 34185101
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  34185057 aagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 45451612 - 45451524
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcata 420  Q
    |||||||||||| | | |||| ||| || ||||||||||| ||||||||||||| ||||  |||||| |||| ||||||||||||||||    
T  45451612 cgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgttcgtgtccgtgtccgtatccgtgcttcata 45451524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 10318035 - 10318093
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtc 10318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 11252022 - 11251971
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||||||||| |||||||||||||| |||||||||||||  |||||||||||    
T  11252022 taattacactgaattatgtgattttctcaaattattagcaatgtcagtgtcc 11251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 17005604 - 17005671
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||| |||||| | || |||||||||||| |||||||||| |||||| ||||||| ||||||||||||    
T  17005604 tgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 34307786 - 34307841
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||| |||||||||| || ||||||||||| ||||||||||||| |||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcag 34307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 40993280 - 40993395
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca-----ccgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttca 376  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||     |     |||||||||||| | |||||||||| |||||||||| |||||| |    
T  40993280 aagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttttttta 40993379  T
Q  377 aattattagctgtgtc 392  Q
    |||||||||| |||||    
T  40993380 aattattagcggtgtc 40993395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 1514671 - 1514617
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| |||||||||||||||||| | || ||||||||||||||| |||||    
T  1514671 ccgacacttataattacactaaattatgcgtttctttcaaattattagcggtgtc 1514617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 1550215 - 1550141
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||| |||| || ||||||| ||||| | |||||||||| |||  ||||||||||||||||||||||| ||||    
T  1550215 gtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgt 1550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 28678379 - 28678309
Alignment:
Q  316 ggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||| |||||| | ||||||||||||| |  ||||| |||||||||||||||||| | |||||||||||    
T  28678379 ggtgtctgacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 32400708 - 32400764
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| ||||||||||||||||   |||||||| || ||||||||||||||||||||||    
T  32400708 cgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtc 32400764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 38731277 - 38731224
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||| | ||| |||||| |||||||||||||||| |||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 392
Target Start/End: Complemental strand, 40052365 - 40052332
Alignment:
Q  359 aattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||||||||||||    
T  40052365 aattatgtgattttttcaaattattagctgtgtc 40052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 384
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| ||||||||||||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 4987229 - 4987269
Alignment:
Q  287 acggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 8789550 - 8789614
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||| | |||||||||  |||||||||||||| ||||||||| ||| ||||| ||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgt 8789614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 16192734 - 16192814
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||| |||||| | |||| | |||||||||| |||||||| ||||| ||||||||||| | ||||| ||||    
T  16192734 gtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgt 16192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 23870574 - 23870649
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc--agtgtcc-tgtctgtatccgtgcttcata 420  Q
    |||| ||||| |||||| ||||||||||||||||||||| |||||   |||||| |||| ||||||||||||||||    
T  23870574 taatcacactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgcttcata 23870649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 32804555 - 32804591
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32804555 taattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 40052426 - 40052382
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||    
T  40052426 aagcacgaacactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 9800106 - 9800047
Alignment:
Q  326 accgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| |||||||||||||||  ||||||||  |||||||| ||||| ||||||||||||    
T  9800106 accgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 17568691 - 17568734
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||    
T  17568691 acacttgtaattacattaaattatgtaattttctcaaattatta 17568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 385
Target Start/End: Complemental strand, 18427060 - 18426956
Alignment:
Q  286 cacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    |||||||||||||| ||||||| |||| |||||| |||||||    || | | ||||||||||  | |||||||||  |||||||||||||||| |||||    
T  18427060 cacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattttttgaaatt 18426961  T
Q  381 attag 385  Q
    |||||    
T  18426960 attag 18426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 3865732 - 3865690
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttca 376  Q
    |||||||||||||||||||| ||| |||||||||| |||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 15999957 - 15999999
Alignment:
Q  285 gcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  15999957 gcacggacactccttggattaggcgtgtcccggtgtcggacac 15999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 17276792 - 17276742
Alignment:
Q  325 caccgaaacgacaccgacacttgtaattacactaaattatgtgattttttc 375  Q
    |||||| ||||||| |||||||||||||| || |||||||||| |||||||    
T  17276792 caccgacacgacactgacacttgtaattataccaaattatgtgtttttttc 17276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 29508497 - 29508451
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||| | |||||||||| |||||| ||||||||||||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 41961574 - 41961628
Alignment:
Q  273 tatacctaataagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||  ||||||||||||| ||| |||||||||||| || |||||||||||    
T  41961574 tatacctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 5339161 - 5339116
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||  ||||| |||||||||||||||| |||||||||||    
T  5339161 cgacacttgtttttacattaaattatgtgattttctcaaattatta 5339116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 398
Target Start/End: Original strand, 7614415 - 7614480
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||||||  | |||||| ||| |||||||||||||| | ||||||||| ||||||| |||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggtgtc 7614480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Complemental strand, 9624685 - 9624640
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    |||||||| | |||||||||||||| ||||||||||||| ||||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 11143301 - 11143244
Alignment:
Q  333 cgacaccgacacttgtaattaca-----ctaaattatgtgattttttcaaattattag 385  Q
    |||||||||||||||||||||||     ||||||||||| ||||| ||||||||||||    
T  11143301 cgacaccgacacttgtaattacactacgctaaattatgtaattttctcaaattattag 11143244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 25211599 - 25211534
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||| | |||||||||| || | |||||| || ||||||||| ||| ||||||||||    
T  25211599 acgacaccgacacatataattacacttaactgtgtgatattctcaaattatcagcagtgtcagtgt 25211534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 10690277 - 10690321
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||| ||| ||||||||| |||||    
T  10690277 taattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 11155094 - 11155030
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacacta-----aattatgtgattttttcaaattattagc 386  Q
    |||| |||||||||| ||||||||||||||||     |||||||| | |||||||||||||||||    
T  11155094 ccgacacgacaccgatacttgtaattacactacactgaattatgtaaatttttcaaattattagc 11155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 420
Target Start/End: Original strand, 13845525 - 13845613
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcata 420  Q
    |||||||||||| | ||||||||||  ||| ||||||||| | |||   ||| ||||||| |||||| |||| ||||||||||||||||    
T  13845525 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttaactgtgtcggtgtccgtgtccgtatccgtgcttcata 13845613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 24204986 - 24205030
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||||  ||||||||||| | ||||||||||||    
T  24204986 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 24205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 8e-35; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 8343081 - 8342966
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||| ||||||| || |||||||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8343081 aagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 8342982  T
Q  383 tagctgtgtcagtgtc 398  Q
    ||||| |||| |||||    
T  8342981 tagctatgtcggtgtc 8342966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 25566944 - 25566835
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||| |||||||||| |||||||||||| ||||      ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25566944 aagcacagacactcctcggattaggcgtgtcccgg------acaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 25566851  T
Q  383 tagctgtgtcagtgtc 398  Q
    ||||||||||||||||    
T  25566850 tagctgtgtcagtgtc 25566835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 13436915 - 13437023
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||| |||||||||  |||||||||||| ||||||||| ||||||| ||||||||||||||||| |||||  | ||||||||||||||||||||||||    
T  13436915 aagcacagacactccttggattaggcgtgtcccggtgtcg-acaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattat 13437013  T
Q  383 tagctgtgtc 392  Q
    ||||||||||    
T  13437014 tagctgtgtc 13437023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 2572040 - 2572115
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2572040 gtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtc 2572115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 5813706 - 5813592
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    ||   | |||||||||||||||| |||||||||| ||||||| ||||||||    
T  5813706 aagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaa 5813607  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  5813606 attattagctgtgtc 5813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 15816113 - 15816188
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  15816113 gtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtc 15816188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 22652051 - 22651976
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  22652051 gtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtc 22651976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 8343376 - 8343311
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgt 8343311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 20873128 - 20873077
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 29510288 - 29510363
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| || ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  29510288 gtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtc 29510363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 4298887 - 4298945
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtc 4298945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 22197743 - 22197800
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgt 22197800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 4948711 - 4948659
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 24613579 - 24613516
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgt 24613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 403
Target Start/End: Complemental strand, 21465487 - 21465401
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    ||||| ||||| || |||||||| |||||||||||||||   |||||| ||||||||||||||||||||||||||| ||||| ||||    
T  21465487 gtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtccgtgtcgtgtc 21465401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 36450699 - 36450813
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||| |||||||||| |||||||||||| | ||||||||||||    ||   | |||||| ||||||||||||||||| |||| ||||||||||||||    
T  36450699 aagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaa 36450798  T
Q  378 attattagctgtgtc 392  Q
    |||||||| ||||||    
T  36450799 attattagttgtgtc 36450813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 40332248 - 40332180
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||| ||||| ||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatttgcagtgtccgtgtcgtgtc 40332180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 22596053 - 22595994
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtc 22595994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 29447094 - 29447169
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||||| ||||||    
T  29447094 gtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtc 29447169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 388
Target Start/End: Original strand, 30077387 - 30077442
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctg 388  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctg 30077442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 18407772 - 18407719
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtc 18407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 41831946 - 41831999
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 41831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 30271290 - 30271350
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  30271290 acgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtc 30271350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 391
Target Start/End: Complemental strand, 7442929 - 7442846
Alignment:
Q  308 cgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||| |||||||| ||||| || || ||||| ||||||||||||||||| |||||||| ||||| | ||||||||||| ||||    
T  7442929 cgtgtcccggtgtccgacactgatacaacaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgt 7442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 13844596 - 13844655
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||||||| |||||||||||||| ||||||||||||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtc 13844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 14731756 - 14731701
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagcagtgtctgtgtcatgtc 14731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 28745573 - 28745498
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||| ||||| ||||| ||||| | |||||||||| ||||||||||||||||| |||||    
T  28745573 gtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtc 28745498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 31557054 - 31556997
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtc 31556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 384
Target Start/End: Original strand, 11927076 - 11927137
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||| | ||||||||||||| | |||||||||| |||||||||||||| |||||||||||    
T  11927076 gacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 24669492 - 24669431
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||||||||||||||||||||||| |||||||| ||||  ||||||||||| | |||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcag 24669431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 31514930 - 31514865
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgatttttt-caaattattagctgtgtcagtgtcc 399  Q
    ||||| ||||||||| |||| || |||||||||||||||| ||||||||||| |||||||||||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtcagtgtcc 31514865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 35519796 - 35519865
Alignment:
Q  322 ggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||||| ||||||| ||||| |  | ||| || ||||||||||||||||||||||||||||||||||    
T  35519796 ggacaccgacacgacactgacacatacatttatacaaaattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 44694842 - 44694785
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||||||||| || |||||||||||||||| |||||||| ||||||||| ||||    
T  44694842 acacttgtaattacgcttaattatgtgattttttaaaattatttgctgtgtcaatgtc 44694785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 3025610 - 3025523
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcata 420  Q
    |||||| ||||| | |||||||||| |||||||||||||| |||||||||||||  || | |||||| ||| |||||||||||||||||    
T  3025610 cgacactgacacctataattacactgaattatgtgattttctcaaattattagcaatgccggtgtccgtgt-tgtatccgtgcttcata 3025523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 25192350 - 25192406
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| |||||| ||| |||||||| | |||||||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtc 25192406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 39954294 - 39954338
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 16641968 - 16642039
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||| ||||||||||||| | |||  |||||||||||||||  ||| |||||||||||| ||||||||||||    
T  16641968 ccgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattattagttgtgtcagtgtc 16642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 20679396 - 20679447
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||| |||||||||| || ||||||||||| ||||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 24362190 - 24362261
Alignment:
Q  321 cggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| ||||||  ||||| | |||||||||| |||||||||||| | ||||||||||||| |||||    
T  24362190 cggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 27101573 - 27101515
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| ||||| | ||||| ||||||||||||||||||||||||||||||||| |||||    
T  27101573 cgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtc 27101515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 33405384 - 33405435
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||| | |||||||||||||||||||| |||| |||||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 34897144 - 34897085
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | |||||||||| |||||||||||||| ||||||||||||| |||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 41838131 - 41838182
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtc 41838182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 4673426 - 4673484
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| || ||||||||||||||| |||| | ||||||||||||||||||| |||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtc 4673484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 25172697 - 25172759
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||||||||||| | |||||||| |||| ||||| ||||| ||||||||||||| |||||||    
T  25172697 acgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcag 25172759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 16867204 - 16867259
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatg---tgattttttcaaattatta 384  Q
    ||||||||||||||| ||||||||||||||||||   | |||||||||||||||||    
T  16867204 acgacaccgacacttataattacactaaattatgttattattttttcaaattatta 16867259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 11944725 - 11944673
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||| | |||||||||| | |||||||||||| |||||||||||    
T  11944725 acgacaccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 17468507 - 17468567
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| ||||||||||||||||   |||||||||||||| ||||||||| | ||||||    
T  17468507 acgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtc 17468567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 22197676 - 22197720
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacac 22197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 22652101 - 22652057
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  22652101 aagcacggacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 29447569 - 29447525
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||    
T  29447569 aagcacggacactcctccgattagacctgtcccggtgtcggacac 29447525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 31236580 - 31236636
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| | |||||||| | |||||||||||||| ||||||||||||| |||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtc 31236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 36934734 - 36934670
Alignment:
Q  328 cgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| || |||| | |||||||| | ||||||||||||||||| |||||||||| |||||    
T  36934734 cgaaacgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 4786338 - 4786389
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||| | |||||||||| |||||||||||||| | |||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 11803384 - 11803341
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca 326  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||    
T  11803384 aagcacggacactcctcggattagacgtgtacctgtgtcggaca 11803341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 14134757 - 14134706
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||  | |||||||||| |||||||||||||| ||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 18170482 - 18170529
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    ||||||||||| ||||||||||| | |||||||| |||||||||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 18634050 - 18634097
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    ||||||||||| ||||||||||| | |||||||| |||||||||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 7472474 - 7472567
Alignment:
Q  291 acactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| ||| ||||||||||||  | | |||||||||  | ||||||| ||||| | |||||||||||| ||||||||||| || ||||||||||    
T  7472474 acacttctcggattaggcgtgtctcagcgtcggacaca-atacgacacagacacatataattacactaatttatgtgatttctttaaattattag 7472567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 11803316 - 11803254
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||| | |||||||||| |||||||||||||| | ||||||||| | ||||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgt 11803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 12606830 - 12606888
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| | |||||||| | |||||| ||||||| ||||||||||||| |||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 384
Target Start/End: Complemental strand, 13018323 - 13018289
Alignment:
Q  350 attacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||| |||||||||||    
T  13018323 attacactaaattatgtgattttgtcaaattatta 13018289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 24858076 - 24858009
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgatt---ttttcaaattattagctgtgtc 392  Q
    |||| |||||| ||||||||||| ||||||| ||||||||||||   |||||||||||||| |||||||    
T  24858076 ccgacacgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaattattaactgtgtc 24858009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 397
Target Start/End: Complemental strand, 4611578 - 4611529
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||| |||||||| ||||| ||||||||||||| ||||| ||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcggtgt 4611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 10002163 - 10002224
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtca 393  Q
    |||||||||||| ||| |||||| |||||||||| | |||||||||||||||| | ||||||    
T  10002163 cgacaccgacacatgtgattacattaaattatgtcatttttttcaaattattatcggtgtca 10002224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 22943301 - 22943338
Alignment:
Q  290 gacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacac 22943338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 27067284 - 27067350
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| |||||||| ||||||| ||||||||||||||||   |||||||| ||||| |||||| |||||    
T  27067284 gtgtccgacaccgacacgacactgacacttgtaattaca--gaattatgtaattttctcaaatcattag 27067350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 34223002 - 34222953
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||| | |||||||||| |||||||||||||| | |||||||||||    
T  34223002 accgacacatataattacacttaattatgtgattttattaaattattagc 34222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 926788 - 926840
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||||||| |||||||||| ||  ||| |||||| ||||||||||||    
T  926788 cgacaccgacacttataattacactgaacaatgagattttctcaaattattag 926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 8343441 - 8343397
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||| ||||||| || |||||||||||| ||||||||||||||    
T  8343441 aagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 12570493 - 12570568
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||| |||||||| || ||| |||||| | |||||||||| ||||||||| |||| | ||||||||||| ||||||    
T  12570493 gtgtctgacaccgatac-acatcgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtca 12570568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 17751770 - 17751730
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgg 323  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  17751770 aagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 17760757 - 17760717
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgg 323  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  17760757 aagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  353 acactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||| |||||||||||||| ||||||||||||| ||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 24205756 - 24205796
Alignment:
Q  286 cacggacactcctccgattaggcgtgtaccggtgtcggaca 326  Q
    |||||||||||||| |||||||||||| |||||||| ||||    
T  24205756 cacggacactcctcggattaggcgtgttccggtgtcagaca 24205796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 26902174 - 26902214
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||| | |||||||||| ||||||||||||||    
T  26902174 acgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 28383829 - 28383881
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||| ||||| |||||| ||| ||||||| |||||||| |||||||||||    
T  28383829 acgacactgacacatgtaataacaataaattacgtgattttatcaaattatta 28383881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 29447519 - 29447467
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgat 369  Q
    ||||| |||||||| |||||||| |||| | |||||||||| |||||||||||    
T  29447519 gtgtctgacaccgacacgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 44067641 - 44067597
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||||  ||||||||||| | ||||||||||||    
T  44067641 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 44067597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 5e-33; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 11596302 - 11596406
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||  || |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  11596302 aagcacggacactcctcagattaggcgtgtcccgatgtcggacaatgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattat 11596401  T
Q  383 tagct 387  Q
    |||||    
T  11596402 tagct 11596406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 23292931 - 23293045
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    ||   | |||||||||||||||||||| ||| |||||||||||||||||||    
T  23292931 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaa 23293030  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  23293031 attattagctgtgtc 23293045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 333 - 420
Target Start/End: Original strand, 28964248 - 28964337
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc--tgtctgtatccgtgcttcata 420  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcaatgtccagtgtccgtatccgtgcttcata 28964337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 2361975 - 2362039
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgt 2362039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 3947706 - 3947825
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||| ||||||| |||| | ||||||||||||          ||| ||||||| |||||||||||||||||| ||||||| ||||||    
T  3947706 aagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgatttt 3947805  T
Q  373 ttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||    
T  3947806 ttcaaattattagctgtgtc 3947825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 4383480 - 4383375
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcg-----gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| |||||||||     |||||||| ||||||| |||| ||||||||||||| ||||||||||| |||||||    
T  4383480 aagcacggacactcctcggattaggcgtgt-ccggtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgat-ttttcaa 4383383  T
Q  378 attattag 385  Q
    ||||||||    
T  4383382 attattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 21945562 - 21945503
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtc 21945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 28084638 - 28084521
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac-------cgaaacgacaccgacacttgtaattacactaaattatgtgatt-tttt 374  Q
    ||||||||||||||||| |||||||||||| || |||||||||||       ||| ||||||| |||||||||||||||| | |||||||||||| ||||    
T  28084638 aagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgtgattttttt 28084539  T
Q  375 caaattattagctgtgtc 392  Q
    |||||| |||||||||||    
T  28084538 caaattcttagctgtgtc 28084521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 51701327 - 51701252
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||| |||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  51701327 gacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtccgtgtc 51701252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 42640638 - 42640526
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatt---ttttcaaat 379  Q
    ||||||||| ||||||| |||||||||||| | |||| |||||||     ||||||||||||||||||||||||| ||||||||||||   |||||||||    
T  42640638 aagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaat 42640539  T
Q  380 tattagctgtgtc 392  Q
    ||| |||||||||    
T  42640538 tatcagctgtgtc 42640526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 333 - 399
Target Start/End: Original strand, 54580023 - 54580089
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgtcc 54580089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 4157208 - 4157144
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattattagttgtgtcagtgtc 4157144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 5775309 - 5775409
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| |||||||||||| |||| |  |||||| || | ||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  5775309 aagcacggacactcctcggattaggcgtgtcccggcggtggacac-gacatgacaccgacacatataattacacttaattatgtgattttctcaaattat 5775407  T
Q  383 ta 384  Q
    ||    
T  5775408 ta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 403
Target Start/End: Complemental strand, 37203366 - 37203253
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||| ||| |||||| ||||| |||||||||||| |      |||||  |||||||||||||||||||||||||| |||||||||||||||    
T  37203366 aagcacggacacttctcggattagacgtgtcccggtgtcggaccc------gacact-acacttgtaattacactaaattatgtcattttttcaaattat 37203274  T
Q  383 tagctgtgtcagtgtcctgtc 403  Q
    |||| ||||| ||||| ||||    
T  37203273 tagccgtgtctgtgtcgtgtc 37203253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 29205501 - 29205445
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 12708256 - 12708146
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt-caaatta 381  Q
    |||||||||| |||||| |||||||||||| ||| |||| ||||  || |||||| ||||||||||||||||||| |||||| | |||||||  ||||||    
T  12708256 aagcacggacgctcctcggattaggcgtgttccgatgtccgacatagacacgacatcgacacttgtaattacactgaattatttcattttttaaaaatta 12708157  T
Q  382 ttagctgtgtc 392  Q
    |||| ||||||    
T  12708156 ttagttgtgtc 12708146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 12895110 - 12895172
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgt 389  Q
    |||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgt 12895172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 30299007 - 30298946
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  30299007 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtc 30298946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 30327875 - 30327814
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  30327875 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtc 30327814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 8423665 - 8423777
Alignment:
Q  285 gcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaa-----cgacaccgacacttgtaattacactaaattatgtgattttttcaaat 379  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |         ||||||||||| || |||||||||| |||||||||||||| ||||||    
T  8423665 gcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaat 8423764  T
Q  380 tattagctgtgtc 392  Q
    ||||||| |||||    
T  8423765 tattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 49431085 - 49431025
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtc 49431025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 715550 - 715672
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cg---aaacgacaccgacacttgtaattacactaaattatgtga-tttttt 374  Q
    ||||||||||||||||| |||||||||||| || ||||||||||     ||   | | |||||| ||||||||||||||||| |||||||||| ||||||    
T  715550 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttt 715649  T
Q  375 caaattattagctgtgtcagtgt 397  Q
     ||||||||||||||||| ||||    
T  715650 taaattattagctgtgtcggtgt 715672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 752876 - 752998
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cg---aaacgacaccgacacttgtaattacactaaattatgtga-tttttt 374  Q
    ||||||||||||||||| |||||||||||| || ||||||||||     ||   | | |||||| ||||||||||||||||| |||||||||| ||||||    
T  752876 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttt 752975  T
Q  375 caaattattagctgtgtcagtgt 397  Q
     ||||||||||||||||| ||||    
T  752976 taaattattagctgtgtcggtgt 752998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 12895274 - 12895325
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 24613685 - 24613760
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||||| ||||||    
T  24613685 gtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtc 24613760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 35157986 - 35158037
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 38847012 - 38847071
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtc 38847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 3712458 - 3712568
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacacc-gacacttgtaattacactaaattatgtgattttttcaaatta 381  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    |||||||| ||||| | |||||||| | |||||  ||||||| ||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgtctacgacaccagacacatataattacattgaattacatgattttctcaaatta 3712557  T
Q  382 ttagctgtgtc 392  Q
    ||||| |||||    
T  3712558 ttagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 19482734 - 19482668
Alignment:
Q  326 accgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  19482734 accgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtc 19482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 30982862 - 30982931
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||| |||||||| ||||||||||||||| |||||||||| || ||||||||||| |||||| ||||||    
T  30982862 gtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 31800477 - 31800542
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||| ||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||| ||||    
T  31800477 acgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgt 31800542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 12797338 - 12797389
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattag 12797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 16303265 - 16303317
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  16303265 acgacaccgacacttgtaattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 420
Target Start/End: Original strand, 22234874 - 22234981
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtc--agtgtcc-tgtctgtatccgt 412  Q
    ||||| |||||||| ||||||||||||| |  ||||||||| |||||||||| |||||||||||| ||||| |||||   |||||| |||| ||||||||    
T  22234874 gtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgtatccgt 22234973  T
Q  413 gcttcata 420  Q
    ||||||||    
T  22234974 gcttcata 22234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 27706176 - 27706228
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  27706176 acgacactcacacttgtaattacactaaattatgtgatttttttaaattatta 27706228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 34306804 - 34306862
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtc 34306862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 50280943 - 50280881
Alignment:
Q  332 acgacaccgacacttgtaattacac--taaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| |||||||||||||||  | |||||||||| |||||||||||||||||||||||    
T  50280943 acgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtc 50280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 6879465 - 6879510
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaa 378  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 4157495 - 4157455
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttt 373  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  4157495 cgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 11651142 - 11651193
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtc 11651193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 15029824 - 15029765
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||| | |||||||||| ||||||||||| |||||||||||||||| |||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtc 15029765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 16073453 - 16073403
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcga-tttttcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 30838279 - 30838216
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||| || |||||||||| |||| ||||||||||||||||| | ||||| |||||||||||||    
T  30838279 gacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattagc 30838216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 40742666 - 40742599
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||||||| |||||| |||||| | ||||||||||| ||||| ||||||| |||||||||||    
T  40742666 gtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 47264044 - 47263986
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| ||||| ||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtc 47263986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 848026 - 847957
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||| |||||| | | |||||||||||||||||||| | | |||||||| ||||| |||||||||||||    
T  848026 gtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 14465088 - 14465133
Alignment:
Q  346 tgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 13134510 - 13134450
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| |||||| | ||||||||||||||||||||||||| | ||||||| ||| |||||    
T  13134510 acgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtc 13134450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 18513180 - 18513224
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||    
T  18513180 aagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 18576007 - 18576086
Alignment:
Q  302 attaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||| ||||| |||||||| || | |||||| |||| | |||||||||  |||||||||||||| |||||||||    
T  18576007 attaggcgtgtcccggtttcggacac-gacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 24343627 - 24343583
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||    
T  24343627 aagcacggacactcctcagaataggcgtgtcccggtgtcggacac 24343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 33950194 - 33950142
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||| | | |||||| |||||||||||||||| |||||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagc 33950142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 36409512 - 36409556
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||    
T  36409512 cgacaccgacacctataattacactaaattatgtgactttttcaa 36409556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 36423678 - 36423722
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||    
T  36423678 cgacaccgacacctataattacactaaattatgtgactttttcaa 36423722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 40481687 - 40481644
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattattag 40481644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 7214523 - 7214574
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||| | | |||||||| |||||||||||||||| ||||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 19312404 - 19312320
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttc----aaattattagctgtgtcagtgtcctgtc 403  Q
    |||| ||| |||||||||| |||| |||||||||| ||| ||||||||||||     ||||||||||||||||| ||||| ||||    
T  19312404 gacaacgacacgacaccgatacttataattacactgaatcatgtgatttttttttttaaattattagctgtgtcggtgtcgtgtc 19312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 21873386 - 21873437
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    ||||| |||| |||||||||||||| |||||||||| || ||||||||||||    
T  21873386 taatttcactgaattatgtgattttatcaaattatttgcagtgtcagtgtcc 21873437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 21929247 - 21929298
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    ||||| |||| |||||||||||||| |||||||||| || ||||||||||||    
T  21929247 taatttcactgaattatgtgattttatcaaattatttgcagtgtcagtgtcc 21929298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 28000743 - 28000794
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattatta 384  Q
    |||||||||||||||||||||||| |||||| ||||| |||| |||||||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 40179636 - 40179687
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| | | |||||||||| |||||||||||||||||||| |||||    
T  40179636 cgacaccgacgcatataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 11931338 - 11931288
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||| |||||| | || |||||||||||||||||||||||||| |||||||    
T  11931338 gacatcgacacatatatttacactaaattatgtgattttttcatattatta 11931288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 24999088 - 24999042
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||||| |||| ||||||||||||||||||| | |||||||||    
T  24999088 taattacactgaattgtgtgattttttcaaattatcaactgtgtcag 24999042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 30094126 - 30094080
Alignment:
Q  284 agcacggacactcctccgattaggcgtgtaccggtgtcggacaccga 330  Q
    ||||||||||||| || |||||||||||| |||||||| ||||||||    
T  30094126 agcacggacactcttcggattaggcgtgtcccggtgtccgacaccga 30094080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 35723374 - 35723444
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtg-attttttcaaattattagctgtgtc 392  Q
    |||||||| ||||||| ||||| | |||||||| | ||||||||| ||||| ||||||||||||| |||||    
T  35723374 gacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtc 35723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 40613504 - 40613450
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| | |||||||||| |||||||||||||| ||||| ||||||| |||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 420
Target Start/End: Original strand, 46083990 - 46084080
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt-cagtgtcc-tgtctgtatccgtgcttcata 420  Q
    ||||||||||||| | ||||||||||| ||||||||||||  | |||  ||||||||||| | |||||| |||| |||||| |||||||||    
T  46083990 acgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtccggtgtccgtgtccgtatccatgcttcata 46084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 36635368 - 36635331
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Original strand, 53381535 - 53381576
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgga 324  Q
    ||||||||||||||||| ||||||| |||| |||||||||||    
T  53381535 aagcacggacactcctcggattaggtgtgtcccggtgtcgga 53381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Complemental strand, 903966 - 903930
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| |||||||||||||| |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 2625964 - 2626056
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac-cgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    ||||||||| ||||||   ||||||||||| | | |||||||||| ||  | | ||||||||| |||||||||||  ||||||||||||||||    
T  2625964 aagcacggatactccttgaattaggcgtgtcctgatgtcggacacgcggcatggcaccgacacgtgtaattacaccgaattatgtgatttttt 2626056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 10499270 - 10499314
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||| ||||| | ||||||||||||||||||||||||| ||||    
T  10499270 cgacactgacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 11797613 - 11797669
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||| |||| ||| || |||||||||||||| |||||| |||||||||| |||||||    
T  11797613 tgtctgacaacgacacaacaccgacacttgtgattacattaaattatgtcatttttt 11797669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 14126118 - 14126162
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||| |||||||||| |||||||||| ||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattatta 14126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 15659754 - 15659818
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||| |||||||| |||| | |||||||||  ||||||| |||||| ||||||||||||| ||||    
T  15659754 ccgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgt 15659818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 21658818 - 21658866
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||  ||||| | |||||||||||||||| ||||||||||||    
T  21658818 accgacacttaaaattatagtaaattatgtgattttctcaaattattag 21658866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 22440562 - 22440606
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| |  |||||||||||    
T  22440562 aagcacggacactcctcggattaggcgtgtcctagtgtcggacac 22440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 22440615 - 22440651
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| |||||||||||||| |||||||||||    
T  22440615 taattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 30982812 - 30982856
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||| |  |||||||||||| ||||||||||||||    
T  30982812 aagcacggacactctttggattaggcgtgtcccggtgtcggacac 30982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 38148724 - 38148784
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| ||||| ||  ||||||||| |||||||||||||| ||||| ||||||| |||||    
T  38148724 acgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtc 38148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 44081592 - 44081628
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||| |||||||| |||||||||||||||||||    
T  44081592 taattacattaaattatatgattttttcaaattatta 44081628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 56257977 - 56257933
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||| ||||||| ||||||||||||| |||||    
T  56257977 taattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 3e-31; HSPs: 117)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 113407 - 113299
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||| || |||||||| |||||||||||| ||||||| |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  113407 aagcatgggcactcctcggattaggcgtgtcccggtgttggacac-gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattat 113309  T
Q  383 tagctgtgtc 392  Q
    ||||||||||    
T  113308 tagctgtgtc 113299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 1486649 - 1486770
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||          ||| ||||||||||||||| |||||||||| ||||||||||||||    
T  1486649 aagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 1486748  T
Q  373 ttcaaattattagctgtgtcag 394  Q
    ||||||||||||||||||||||    
T  1486749 ttcaaattattagctgtgtcag 1486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 1704940 - 1705056
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacacc--gaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    ||||| ||||||||||  ||||||||||||  |||||||||||||   || ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  1704940 aagcatggacactccttggattaggcgtgtctcggtgtcggacacgttgacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaatt 1705039  T
Q  381 attagctgtgtcagtgt 397  Q
    ||||| |||||| ||||    
T  1705040 attagatgtgtcggtgt 1705056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 22515887 - 22515946
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 42359394 - 42359510
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac-cgaaa----cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||       ||||||||||||||||||||||||| |||| ||||||||||||||    
T  42359394 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaa 42359493  T
Q  378 attattagctgtgtcag 394  Q
    |||||||| ||||||||    
T  42359494 attattagatgtgtcag 42359510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 22881572 - 22881675
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcg-gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 381  Q
    ||||||||||||||||| |||||| ||||| ||||||||| | |       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22881572 aagcacggacactcctcggattagacgtgtcccggtgtcgtgtc-------cgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 22881664  T
Q  382 ttagctgtgtc 392  Q
    |||| ||||||    
T  22881665 ttagttgtgtc 22881675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 46348383 - 46348442
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtc 46348442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 24577185 - 24577247
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  24577185 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcag 24577247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 18337388 - 18337302
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcata 420  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||||||||| |||| ||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattggc-atgtcagtgtccgtgtc-gtatccgtgcttcata 18337302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 38078661 - 38078720
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtc 38078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 47989572 - 47989505
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47989572 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 40258934 - 40258999
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgtcc 40258999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 48450592 - 48450645
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgt 48450645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 3069516 - 3069564
Alignment:
Q  489 cacaaatataaagtgaataataatacataccatcttgaagcaacattaa 537  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3069516 cacaaatataaagtgaataataatacataccatcttgaagcaacattaa 3069564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 389
Target Start/End: Original strand, 6612155 - 6612227
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgt 389  Q
    ||||| |||| ||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  6612155 gtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgt 6612227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 31672895 - 31672959
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgt 31672959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 417
Target Start/End: Original strand, 32461448 - 32461550
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc--agtgtc-ctgtctgtatccgtg 413  Q
    ||||| |||||||| || ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| |   ||||| |||||||||||||||    
T  32461448 gtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgtcactgtctgtatccgtg 32461546  T
Q  414 cttc 417  Q
    ||||    
T  32461547 cttc 32461550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 392
Target Start/End: Complemental strand, 17778615 - 17778549
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| ||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  17778615 gacaccgacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 41877470 - 41877529
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtc 41877529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 21378635 - 21378573
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgt 21378573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 31694694 - 31694771
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtga--ttttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||| ||||    
T  31694694 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtc 31694771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 2218342 - 2218264
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtg 367  Q
    ||||||||||||||||| |||||||||||| |  |||||||||||      ||||||||||||||||||||||||||||||||||    
T  2218342 aagcacggacactcctcagattaggcgtgtcctagtgtcggacac------gacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 18190109 - 18190170
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagt 395  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtcagt 18190170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 18556446 - 18556515
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||  |||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18556446 gacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtc 18556515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 25272542 - 25272481
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  25272542 acgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtca 25272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 28273072 - 28273149
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||| |||| ||| | |||||||||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||    
T  28273072 gtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcag 28273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 338 - 391
Target Start/End: Complemental strand, 31015097 - 31015044
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 40917817 - 40917751
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  40917817 acaccgacacgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtc 40917751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 14359529 - 14359580
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtc 14359580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 15449216 - 15449272
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttt 373  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  15449216 gtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 382
Target Start/End: Complemental strand, 44482335 - 44482240
Alignment:
Q  284 agcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||||||||||||| ||||||  ||||    ||||| |||||||| ||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  44482335 agcacggacactcctcggattagctgtgtc---gtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 51410084 - 51410024
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtc 51410024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 9103698 - 9103640
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtc 9103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 19058856 - 19058915
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||| || |||| |||||||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtc 19058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 5376452 - 5376559
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||| |||||||||| ||||||  |||| |  ||||| |||| ||| ||||||||||||||| |||||||||| |||||||| ||||| | |||||||    
T  5376452 aagcacagacactcctcggattagatgtgtgc--gtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattat 5376549  T
Q  383 tagctgtgtc 392  Q
    |||| |||||    
T  5376550 tagcggtgtc 5376559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 5927340 - 5927398
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgt 5927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 6332739 - 6332666
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||| | |||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  6332739 gacaccaacacgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattattagttgtgtccgtgt 6332666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 390
Target Start/End: Complemental strand, 5944343 - 5944283
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatt--ttttcaaattattagctgtg 390  Q
    ||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||    
T  5944343 acgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtg 5944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 7918159 - 7918263
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacacc--gaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    ||||||||||||||||| ||||||| |||| | |||||| || ||   || ||||||| ||||| | |||||||||| |||||||||||||| |||||||    
T  7918159 aagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgttgacacgacactgacacatataattacactgaattatgtgattttctcaaatt 7918258  T
Q  381 attag 385  Q
    |||||    
T  7918259 attag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 37598945 - 37598832
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| ||  ||||||||||    ||   | ||||||||||||| |||||||||| |||| ||||||||||||||    
T  37598945 aagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaa 37598847  T
Q  378 attattagctgtgtc 392  Q
    |||||||| ||||||    
T  37598846 attattagttgtgtc 37598832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 48040419 - 48040521
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttcaaatta 381  Q
    |||||||||||||||||| ||||||||||| || |||||||||||         ||||||||||||| |||||||||| |||||||  ||||||||||||    
T  48040419 aagcacggacactcctccaattaggcgtgtcccagtgtcggacac--------gaccgacacttgtatttacactaaaatatgtgacctttttcaaatta 48040510  T
Q  382 ttagctgtgtc 392  Q
    ||| |||||||    
T  48040511 ttatctgtgtc 48040521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 13011223 - 13011275
Alignment:
Q  341 acacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtc 13011275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 34371782 - 34371707
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||||| | ||||||||||||| | |||||||||| |||||||||||||| || |||||||||| ||||||||||||    
T  34371782 gacaccaacacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcagtgtcc 34371707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 9629884 - 9629959
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||| ||| ||||||||||||||| |||| ||||| |||||| ||||||| ||||||||||||| |||||    
T  9629884 gtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtc 9629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 12443476 - 12443546
Alignment:
Q  349 aattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtctgtatccgtgcttcataat 422  Q
    ||||||||| |||||||||||||| |||||||||||||||||||   | | |||| ||||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtc---ggcgtgtccgtatccgtgcttcataat 12443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 403
Target Start/End: Complemental strand, 29229521 - 29229450
Alignment:
Q  333 cgacaccgacacttgtaattac-actaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    |||||||||||| | ||||||| ||||||| |||||||||| ||||||||||||| ||||||||||| ||||    
T  29229521 cgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtcagtgtcgtgtc 29229450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 35702588 - 35702647
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| |||||||||||||||||| |||||| |||  ||||||||||||||||||||||    
T  35702588 cgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtc 35702647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 40181930 - 40181848
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtctgtatccgtgcttcata 420  Q
    ||||||||| || | |||||||||| |||||||||||||| ||||||||||||| ||||| ||||||     ||||||||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtctgtgtcc-----gtatccgtgcttcata 40181848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 384
Target Start/End: Complemental strand, 1815368 - 1815265
Alignment:
Q  286 cacggacactcctccgattaggcgtgtaccggtgtcggaca----ccgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    ||||| |||||||| |||||||||||| |||||||||||||     ||   | |||||||||||||||||||||||| |||||||||||||||| ||||     
T  1815368 cacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaata 1815269  T
Q  381 atta 384  Q
    ||||    
T  1815268 atta 1815265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 1864882 - 1864944
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||| | |||||||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 10572539 - 10572641
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||   ||||||||||| |  ||| | |||||| | || |||||||||| | |||||||||  |||||||||||||| |||||||||    
T  10572539 aagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattat 10572638  T
Q  383 tag 385  Q
    |||    
T  10572639 tag 10572641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 392
Target Start/End: Complemental strand, 18471355 - 18471298
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgatt--ttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtc 18471298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 36878519 - 36878461
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| | |||||||||| |||||||||||||| ||||||||||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 5898211 - 5898325
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||    ||   | ||||||||| | | |||||||||| ||||||||||||||||||     
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcag 5898310  T
Q  378 attattagctgtgtc 392  Q
    ||||||||| |||||    
T  5898311 attattagcggtgtc 5898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 15323215 - 15323166
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgt 389  Q
    |||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgt 15323166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 23738735 - 23738678
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||| | ||||| |||| ||||||||||||||||||||||||||||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtc 23738678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 25361961 - 25361896
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||| |||||||| ||||||| ||||| | |||||||||| |||||||||||||| |||||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 32434718 - 32434775
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||||||||||||| | |||||||||| |||||||||||||||| ||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtc 32434775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 35919231 - 35919317
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccg-gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    ||||||||||| |||||||||||||||||| ||| ||||| |||||      ||||| ||||||| |||||||||| ||||||||||||||||    
T  35919231 aagcacggacagtcctccgattaggcgtgtcccgcgtgtccgacac------gacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 398780 - 398824
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 8010278 - 8010374
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc-ctgtctgtatccgtgcttcat 419  Q
    ||||||| || ||| |||||||| |||||| ||| |||||| | |||||||||||||||||||| || | |||||  |||||||||||||| |||||    
T  8010278 acaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattagctctgccggtgtcagtgtctgtatccgtgattcat 8010374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 9828119 - 9828051
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| ||||| || ||||||||||||| |  ||||||||| |||||||||||||| ||||||||||||    
T  9828119 gtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 14332642 - 14332694
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||| || | ||||||||||||||||||||||||| ||||||||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 34712328 - 34712436
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac-----cgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||   ||||| ||||| || |||| ||||||     ||| ||||||| ||||| | ||||||||||||||||||| ||||| ||||    
T  34712328 aagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacactaaattatgttattttctcaa 34712427  T
Q  378 attattagc 386  Q
    |||||||||    
T  34712428 attattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 30359441 - 30359398
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||| | ||||||||||||||||||||||||||||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattat 30359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 343 - 386
Target Start/End: Original strand, 37055866 - 37055909
Alignment:
Q  343 acttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  37055866 acttgtaattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 39953146 - 39953205
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| |  |||||||||||||||||||||||| | ||||||||||| |||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 27471557 - 27471619
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||| | |||||| |||| |||||||||||| ||||||||| |||| |||||||||||||    
T  27471557 acaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 3069362 - 3069438
Alignment:
Q  43 cacacaccaagacaccaactctaattttgtataacaaactagaggtgtgttgtgtgtaactgaggggaatttagtgtcttac 124  Q
    ||||||| ||| |||| |||||| |||||||||||||||||||||||||     ||||||| ||||||||||  ||||||||    
T  3069362 cacacacaaagtcaccgactctatttttgtataacaaactagaggtgtg-----tgtaactaaggggaatttgatgtcttac 3069438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 17754379 - 17754306
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||| || |||| ||||| | || ||||||| |||||||| ||||||||||||||||||| ||||| ||||    
T  17754379 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 17754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 24334705 - 24334770
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatg-tgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||||||||||||||| |||||||    ||||||||||| |||||||||||| ||||    
T  24334705 cgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgt 24334770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 6427589 - 6427545
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||| || |||||||||||| ||||||||||||||    
T  6427589 aagcacggacactcatcagattaggcgtgtcccggtgtcggacac 6427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 9828169 - 9828125
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  9828169 aagcacggacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 16164330 - 16164366
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||| ||||||||||||||||||||||||||||    
T  16164330 taattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 16297226 - 16297270
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||    
T  16297226 aagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 20157349 - 20157409
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||| | | |||||||| |||||||||||||| ||| ||||||||| |||||    
T  20157349 acgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 29144325 - 29144369
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||| || |||||||||||| ||||||||||||||    
T  29144325 aagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 29144365 - 29144417
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||  ||||| |  ||||||||||||||||||||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtc 29144417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 40917874 - 40917830
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||    
T  40917874 aagcacggacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 46940753 - 46940797
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||    
T  46940753 aagcacgaacactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 52284759 - 52284695
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttc-aaattattagctgtgtcagtgtcc 399  Q
    |||||||||||||||||| ||| |||||| |  ||||||  ||||||||||||||||||||||||    
T  52284759 caccgacacttgtaattatactgaattatatttttttttttaaattattagctgtgtcagtgtcc 52284695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 6427410 - 6427351
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||| |||| | |||||||| | |||||||||||||| ||||||||||||| ||||    
T  6427410 acgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 392
Target Start/End: Original strand, 16297295 - 16297342
Alignment:
Q  345 ttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||| |||| ||||||||||||| |||||| ||||||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtc 16297342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 16927200 - 16927239
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagct 387  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagct 16927239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 21530748 - 21530697
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||||| |||||| || ||||||| ||||||| |||||||||||    
T  21530748 cgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 31694644 - 31694683
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcg 322  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  31694644 aagcacggacactcctcagattaggcgtgttccggtgtcg 31694683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 38503378 - 38503315
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||| | |||||||||| || ||| ||||||| ||||||||||||| ||||| ||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgt 38503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 2283726 - 2283676
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||||| |||||| |||||||| | ||| ||||||||||||||||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 9709879 - 9709821
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| | ||||||||   |||||||||||||| ||||||||||||| ||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 23653040 - 23652994
Alignment:
Q  351 ttacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||| || |||||||||||||||||||||||||| |||| ||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcggtgt 23652994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 374
Target Start/End: Complemental strand, 28663668 - 28663626
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    ||||||||||||||||||||||||   ||||||||||||||||    
T  28663668 acgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 374
Target Start/End: Original strand, 30173761 - 30173803
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||||||||||||||||||||||||| | |||||| |||||||    
T  30173761 acgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 392
Target Start/End: Complemental strand, 1262917 - 1262884
Alignment:
Q  359 aattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||| |||||||||||||||||||    
T  1262917 aattatgtgattttctcaaattattagctgtgtc 1262884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 3490396 - 3490449
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| ||| ||||  |||| ||||||||||||| |||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtc 3490449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 6427524 - 6427461
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatt---ttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||||| ||||| | ||||||||||||   ||||||||||||||| ||||||    
T  6427524 acgacactgacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtc 6427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 7353493 - 7353546
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||  | ||||||||||||||||||| |||||||| ||||| ||||    
T  7353493 cgacaccgacatatataattacactaaattatgtaattttttcgaattaatagc 7353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 11605943 - 11605988
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||| ||||||| |||| |||||| |||||||||||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattagc 11605988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 12713342 - 12713379
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  12713342 taattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 12717433 - 12717470
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  12717433 taattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 13997940 - 13997891
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| | |||||||||| |||||||||||||||| |||| ||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataatta 13997891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 16812670 - 16812629
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgga 324  Q
    ||||||||||||||||| |||||||||||| ||||| |||||    
T  16812670 aagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Original strand, 21365997 - 21366038
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgga 324  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  21365997 aagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 21621014 - 21620973
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Original strand, 22515832 - 22515873
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgga 324  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  22515832 aagcacggacactcctcggattaggcgtgtctcggtgtcgga 22515873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 26526758 - 26526822
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtg--attttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||||||||| | |||||||||||   |||||| ||||||||||||| || |||||    
T  26526758 acaccgacacttgtaattatattaaattatgtgttttttttttaaattattagctgcgttagtgt 26526822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 26830702 - 26830657
Alignment:
Q  282 taagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||||| |||||||||||| ||||| ||| ||||    
T  26830702 taagcacggacactcctctgattaggcgtgtcccggtatcgaacac 26830657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 34298480 - 34298443
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 2896140 - 2896180
Alignment:
Q  352 tacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| |||||||||||||| ||||||||||||| |||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtc 2896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 8117092 - 8117031
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgatttt----ttcaaattattagctgtgt 391  Q
    |||||| | ||||||||||||||| ||||||||| ||||    |||||||||||||||||||    
T  8117092 gacaccaatacttgtaattacactgaattatgtgttttttttcttcaaattattagctgtgt 8117031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 10233370 - 10233326
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| ||||||| |||| | ||||||||||||    
T  10233370 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 394
Target Start/End: Complemental strand, 12612008 - 12611964
Alignment:
Q  350 attacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||| ||||||||||||||||||||||| || | |||||||    
T  12612008 attacactcaattatgtgattttttcaaattactaacagtgtcag 12611964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 19324606 - 19324562
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||| ||||||||| ||| |||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtc 19324562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 21032281 - 21032202
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||| | |||||||||||| ||||||||| | | ||||| || |||||||  |||||||| ||||||||||||    
T  21032281 gtgtccgacacccacacgacaccgacatttgtaattatatttaattaagtaatttttt-taattattaactgtgtcagtgt 21032202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 25098570 - 25098614
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||| ||||||||| ||| |||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 26837757 - 26837793
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||| | |||||||||||||||||    
T  26837757 taattacactaaattatattattttttcaaattatta 26837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 30847737 - 30847781
Alignment:
Q  350 attacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||| | |||||||| ||||||||||||||||||| |||||||    
T  30847737 attacattgaattatgtcattttttcaaattattagcagtgtcag 30847781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 34257925 - 34257961
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||| | |||||||||    
T  34257925 taattacactaaattatgtgattttattaaattatta 34257961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 26033446 - 26033541
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgt 412  Q
    |||| |||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  26033446 tgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgcgtcagtgtccgtgtctgtatccgt 26033541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 283 - 399
Target Start/End: Complemental strand, 9778619 - 9778493
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||          ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  9778619 aagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgatttt 9778520  T
Q  373 ttcaaattattagctgtgtcagtgtcc 399  Q
    |||||||||| ||||||||||||||||    
T  9778519 ttcaaattatcagctgtgtcagtgtcc 9778493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 24339717 - 24339642
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24339717 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 24339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 5409776 - 5409897
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||          ||| ||||||||||||||||||||| |||| ||||||||||||||    
T  5409776 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgatttt 5409875  T
Q  373 ttcaaattattagctgtgtcag 394  Q
    ||||||||||||||||| ||||    
T  5409876 ttcaaattattagctgtatcag 5409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 9408318 - 9408398
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  9408318 gtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgt 9408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 285 - 388
Target Start/End: Original strand, 18215144 - 18215241
Alignment:
Q  285 gcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||| |||||||||||| ||||||||||||||      ||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacac------gacaccgacacttgtaactacactgcattatgtgattttttcaaattatta 18215237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 11272535 - 11272647
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccg-gtgtcggacaccgaaacgacaccgacacttgtaattacactaaat--tatgtgattttttcaaat 379  Q
    |||||| || ||||||| |||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  11272535 aagcacagatactcctcggattaggcgtgtcccgcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaat 11272634  T
Q  380 tattagctgtgtc 392  Q
    ||| || ||||||    
T  11272635 tatcagttgtgtc 11272647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 11061077 - 11061140
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgt 11061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 13770810 - 13770691
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    |||||||||||||| || |||||||||||| ||||||||||||||          ||| |||||| ||||||||||||||||||| |||||||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  373 ttcaaattattagctgtgtc 392  Q
    || |||||||||||||||||    
T  13770710 tttaaattattagctgtgtc 13770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 19213862 - 19213774
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcata 420  Q
    ||||||||||||||||| |||||||  ||||||||||||||| ||||||||||| |||||||||||| |||| | ||||||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtcagtgtccgtgtccgcatccgtgcttcata 19213774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 25481961 - 25481902
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25481902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 3991384 - 3991319
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgt 3991319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 392
Target Start/End: Complemental strand, 7438775 - 7438706
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||    
T  7438775 gacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtc 7438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 388
Target Start/End: Original strand, 43027409 - 43027524
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacacc----------gaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    |||||||||||||| || |||||||||||| ||||||||||||||           || |||||||||||||||||| |||||||  |||||||||||||    
T  43027409 aagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgatttt 43027508  T
Q  373 ttcaaattattagctg 388  Q
    ||||||||||||||||    
T  43027509 ttcaaattattagctg 43027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 11831507 - 11831432
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||  | |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  11831507 gtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtc 11831432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 19992061 - 19991971
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt-cagtgtcc-tgtctgtatccgtgcttcata 420  Q
    ||||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||| ||||| || |||| |||||| |||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtccagtgcccgtgtccgtatccatgcttcata 19991971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 7058486 - 7058397
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtg-tcctgtctgtatccgtgcttcata 420  Q
    |||||||| ||||||||||||||||| |||||  |||||||||||||||||||| ||| |||||| || ||||||||||| | |||||||    
T  7058486 acgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgtatcagtgttcgtgtctgtatccatacttcata 7058397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 324 - 384
Target Start/End: Complemental strand, 18039067 - 18039006
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattatta 384  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 40287307 - 40287415
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||      ||| ||||||||||||||||||||| || ||| |||||||||||||||||    
T  40287307 aagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtccgataccgacacttgtaattacactgaa-tatatgattttttcaaattat 40287405  T
Q  383 tagctgtgtc 392  Q
    | | ||||||    
T  40287406 tcgttgtgtc 40287415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 2334310 - 2334256
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatt--ttttcaaattatta 384  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  2334310 acgacaccgacacttgtaattacactaaattatgtgattttttttcaaattatta 2334256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 394
Target Start/End: Original strand, 11665430 - 11665501
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||| | |||| |||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  11665430 gacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcag 11665501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 15680868 - 15680809
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtc 15680809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 21560572 - 21560521
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  21560572 gacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 21864867 - 21864801
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtga--ttttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||    
T  21864867 cgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgt 21864801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 21880211 - 21880158
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 27945101 - 27945048
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  27945101 acgacaccgacacttgtaattacactgaattatgtaattttctcaaattattag 27945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 32094014 - 32094079
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgt 391  Q
    |||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  32094014 ccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 8234205 - 8234141
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||| ||||||||| |||||| |||||||| |||||||||||||||||| |||||| ||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgt 8234141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 395
Target Start/End: Complemental strand, 13300479 - 13300407
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagt 395  Q
    |||||||| | |||||||| ||| ||||||||||| |||||| |||||||||||||||||||| | |||||||    
T  13300479 gacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtcagt 13300407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 7197297 - 7197356
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||| | |||||  ||||||||| |||||||||||||||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtc 7197356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 8160485 - 8160410
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||| |||| ||| |||| | ||||||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  8160485 gacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtcagtgtc 8160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 15902897 - 15902830
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| || ||||| || |||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  15902897 gtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 24105737 - 24105678
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 25822730 - 25822655
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| || ||||| |||||||||||||||||||||||||| |||| ||   ||||||||||||||||| ||||||    
T  25822730 gtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtc 25822655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 421
Target Start/End: Original strand, 27093415 - 27093502
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcataa 421  Q
    |||||||| | | ||||||||||||||||||||||||| | ||||||||||| ||||| || ||| |||| |||| ||||||||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcggtatccatgtccgtattcgtgcttcataa 27093502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 421
Target Start/End: Complemental strand, 27184886 - 27184799
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc-tgtctgtatccgtgcttcataa 421  Q
    |||||||| | | ||||||||||||||||||||||||| | ||||||||||| ||||| || ||| |||| |||| ||||||||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcggtatccatgtccgtattcgtgcttcataa 27184799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 28155629 - 28155570
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtc 28155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 7328690 - 7328744
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||| | ||||||||||||||||||| ||||| |||||||||||||    
T  7328690 acgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 3721152 - 3721099
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 6028694 - 6028633
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| || |||||||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  6028694 gacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaattatta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 1433573 - 1433462
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||| |||||| ||||| | ||||||||||||          ||| ||||||||||||| | ||||||||| |||| ||||||||||    
T  1433573 aagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgatttt 1433474  T
Q  373 ttcaaattatta 384  Q
     |||||||||||    
T  1433473 ctcaaattatta 1433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 399
Target Start/End: Original strand, 11890913 - 11890985
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||| |||||||| |||||  |||||||||| |||||| ||||||||||||||||||| | || |||||||||    
T  11890913 ccgacacgacacctacactcataattacactgaattatatgattttttcaaattattaaccgtatcagtgtcc 11890985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 20549850 - 20549786
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||| | |||||||||| ||||| |||||||| ||||||||||||| ||||| ||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgt 20549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 32308188 - 32308120
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||||||| ||||| |  ||||||||| |||||||||||||| ||||||||||||| |||||    
T  32308188 acaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 35862024 - 35861964
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||  ||||||| | ||||||||||||||||||||||||||| ||||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtc 35861964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 6490830 - 6490783
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccga 330  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  6490830 aagcacggacactcctcggattaagcgtgtcccggtgtcggacaccga 6490783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 398
Target Start/End: Complemental strand, 16341561 - 16341490
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||| ||||||||| ||| | |||||||||| |||||||||||||| ||||||||||| | ||||| |||||    
T  16341561 ccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtccgtgtc 16341490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 26733363 - 26733304
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||| ||| |||||||||||||| ||||||||||||| |||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtc 26733304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 42720891 - 42720950
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||| ||||| | |||||||| | |||||||||||||||||||||||||||| ||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtca 42720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 1885649 - 1885587
Alignment:
Q  316 ggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaa 378  Q
    |||||| |||||| | ||||||||||||||||| |||||| | |||||||| |||||||||||    
T  1885649 ggtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 38143281 - 38143231
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||| |||| | |||||||| ||||||||||||||||||||||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 598322 - 598208
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||    ||   | |||||||||||||  ||||||| | ||||| |||||||| | ||    
T  598322 aagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaa 598223  T
Q  378 attattagctgtgtc 392  Q
    ||||||||| |||||    
T  598222 attattagcggtgtc 598208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 10042997 - 10042944
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||| ||||||| ||||||| ||||||||||||| ||| ||||||||||||    
T  10042997 acgacactgacacttataattacgctaaattatgtgaatttatcaaattattag 10042944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 32287408 - 32287522
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac-cgaaa----cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||  |  |    |||||||||||| | || || |||| |||||||||||||| |||     
T  32287408 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcag 32287507  T
Q  378 attattagctgtgtc 392  Q
    ||||||||| |||||    
T  32287508 attattagcggtgtc 32287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 41020553 - 41020496
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| | | ||||||||||||||||||||||||||  |||||||||| ||||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtc 41020496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 1401083 - 1401031
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||| |||| |||||||||| |||||||||| ||| |||||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 5954294 - 5954254
Alignment:
Q  345 ttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  5954294 ttgtaattacactagattatgtaattttttcaaattattag 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 27229310 - 27229350
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  27229310 acgacaccgatacttataattacactaaattatgtgatttt 27229350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 29787384 - 29787428
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 372
Target Start/End: Complemental strand, 35750001 - 35749916
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    |||||| ||||||||||||| |||| |||| ||||| ||||||||    |||||||||||||||  ||||||||| ||| |||| |||||    
T  35750001 aagcacagacactcctccgactaggtgtgtcccggtttcggacac----acgacaccgacacttacaattacactgaataatgttatttt 35749916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaa 378  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 372
Target Start/End: Original strand, 18213033 - 18213072
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  18213033 cgacaccgacacatataattacactaaattatgtgatttt 18213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 22602709 - 22602756
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaat 379  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||||||    
T  22602709 acgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 26329366 - 26329433
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||||||| ||||| ||||||| | |||||||||| |||| |||| |||| |||||||||||    
T  26329366 gtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 33994270 - 33994223
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaatta 381  Q
    ||||||||||||||||||| |||| ||||||||||  |||||||||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaatta 33994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| | |||||| | | |||||||||||||| ||||||||||||| |||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 23191942 - 23191896
Alignment:
Q  346 tgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| || ||||||||||| ||||||||||||| |||||    
T  23191942 tgtaattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 43250120 - 43250074
Alignment:
Q  281 ataagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||||||  ||||||||||| | ||||||||||||    
T  43250120 ataagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 43250074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 5233686 - 5233637
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||| | ||||||||||| ||||||||||||| |||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 7973125 - 7973205
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtga--ttttttcaaattattagctgtgtcagtgtcctgtctgtatccgtg 413  Q
    ||||| ||| ||||||||||| ||||||||||||  ||||||||||||||||  |||||| | | | |||| |||||||||    
T  7973125 acaccaacatttgtaattacattaaattatgtgattttttttcaaattattaattgtgtcggcggcatgtcagtatccgtg 7973205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||||||||| | |||||||||| |||| ||||||||| |||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 24339767 - 24339726
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcgga 324  Q
    |||||||| |||||||| |||||||||||| |||||||||||    
T  24339767 aagcacgggcactcctcggattaggcgtgtcccggtgtcgga 24339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Original strand, 29763187 - 29763232
Alignment:
Q  346 tgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||| |||||| |||||||||||||||||||||||| || |||||    
T  29763187 tgtaactacacttaattatgtgattttttcaaattataagttgtgt 29763232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 30813863 - 30813818
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||| |||||||||||| |||||||| ||||| |||||||||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 49107880 - 49107816
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||| | |||| ||||| ||||||||| |||| ||||||||||||| ||||| ||||    
T  49107880 acgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgt 49107816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 2948739 - 2948683
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| | |||||||||||||||| |||||||| | ||||||| ||| |||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtc 2948683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 6630896 - 6630964
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| |||||| | |||||| |||||| | |||||||||| ||||| |||| ||| ||||||||||||    
T  6630896 gtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattag 6630964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 13557750 - 13557782
Alignment:
Q  342 cacttgtaattacactaaattatgtgatttttt 374  Q
    |||||||||||||||| ||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgatttttt 13557782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 14729813 - 14729773
Alignment:
Q  287 acggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||| ||||| |||||| ||||||||||||||    
T  14729813 acggacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 29763134 - 29763178
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| | | ||||||||||    
T  29763134 aagcacggacactcctcggattaggcgtgtcctgatgtcggacac 29763178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 30731106 - 30731037
Alignment:
Q  321 cggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| | |||||||||||||    ||||||||| |||||||||||||| |||||||||| || |||||    
T  30731106 cggacaccaacacgacaccgacacac--aattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 30813911 - 30813867
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| | | ||||||||||    
T  30813911 aagcacggacactcctcggattaggcgtgttctgatgtcggacac 30813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 80)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 21351855 - 21351969
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||||||||||| || |||||| ||||| || |||||||||||||| | |||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  21351855 aagcacggacactcttcggattagacgtgttccagtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattat 21351954  T
Q  383 tagctgtgtcagtgt 397  Q
    ||| |||||| ||||    
T  21351955 tagttgtgtcggtgt 21351969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 420
Target Start/End: Complemental strand, 39698616 - 39698510
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca--gtgtc-ctgtctgtatccgtg 413  Q
    ||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||  |||| |||||||||    
T  39698616 gtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtg 39698517  T
Q  414 cttcata 420  Q
    |||||||    
T  39698516 cttcata 39698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 21191001 - 21191115
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaa-----cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||          ||||||||||||||||||||||||| |||||||||||||||||||    
T  21191001 aagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 21191100  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  21191101 attattagctgtgtc 21191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 7677780 - 7677705
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  7677780 gtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtc 7677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 19579776 - 19579701
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19579776 gtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtc 19579701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 14674323 - 14674269
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 14674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 420
Target Start/End: Complemental strand, 17088402 - 17088253
Alignment:
Q  286 cacggacactcctccgattaggcgtgtaccggtgtcggacac-----------cgaaacgacaccgacacttgtaattacactaaattatgtgatt-ttt 373  Q
    |||||||||||||| |||||||||||| ||||||||||||||           ||| ||||||  |||||||||||| |||||||||||||||||| |||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttttt 17088303  T
Q  374 tcaaattattagctgtgtcagtgt---cctgtctgtatccgtgcttcata 420  Q
    |||||||||||| |||||||||||   |||||| ||||| ||||||||||    
T  17088302 tcaaattattagatgtgtcagtgtgtccctgtcagtatcagtgcttcata 17088253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 21576690 - 21576803
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| || ||||| |||||    ||   | |||| ||||||||||||||||||| |||||||||||||||||||    
T  21576690 aagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaa 21576789  T
Q  378 attattagctgtgt 391  Q
    ||||||||||||||    
T  21576790 attattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 33178084 - 33177996
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt-cctgtctgtatccgtgcttcata 420  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| | ||  | ||||| ||||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagtctgcatccgtgcttcata 33177996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 6247681 - 6247622
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtc 6247622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 21522825 - 21522750
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  21522825 gtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtc 21522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 21533391 - 21533316
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  21533391 gtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtc 21533316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 42893418 - 42893355
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgt 42893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 41995578 - 41995471
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||  |||||||||||| |  ||||| |||||||| ||| ||||||||||  |||||||| | ||||||||||||||||| ||||||    
T  41995578 aagcacggacactcctaggattaggcgtgtcctcgtgtccgacaccgatacggcaccgacact--taattacattgaattatgtgattttttcgaattat 41995481  T
Q  383 tagctgtgtc 392  Q
    ||| ||||||    
T  41995480 tagttgtgtc 41995471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 31084388 - 31084323
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtc 31084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 13287398 - 13287458
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  13287398 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtc 13287458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 37328828 - 37328908
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||| ||||||||||||| |||||||||||| |||| |||||||||| ||||||||| |||||||| ||||    
T  37328828 gtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgt 37328908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 41633803 - 41633735
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| |||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||    
T  41633803 acaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtc 41633735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 21542105 - 21542030
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| || |||| |||||||||| ||||||    
T  21542105 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtc 21542030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 5894827 - 5894912
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtctgtatccgt 412  Q
    |||| |||||||||||||||||| ||| | |||||||| |||||||||||||||||||| |||||| ||||| |||| || |||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtccgtgtcgtgtccgtgtccgt 5894912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 6471888 - 6471955
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||||||| |||| | |||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  6471888 acgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtcc 6471955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 8420086 - 8420027
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||| ||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtc 8420027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 36838619 - 36838544
Alignment:
Q  317 gtgtcggacaccgaa-acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| || ||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  36838619 gtgtcggacaccaaacacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 382
Target Start/End: Complemental strand, 43564995 - 43564891
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||| ||| |||||||||||| |||| |||||||||    ||   | ||||||||||||| |||||||||||||||||||||||||| |||    
T  43564995 aagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaa 43564896  T
Q  378 attat 382  Q
    |||||    
T  43564895 attat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 24906305 - 24906359
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgt 24906359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 10298634 - 10298569
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||||||||||||||||||||| |  ||||||||| |||||||||||||||| ||||||    
T  10298634 ccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 10298569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 15405062 - 15405119
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtcagtgt 15405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 15884047 - 15883987
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtc 15883987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 17177025 - 17177081
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||||||||||||||||| | |||| | ||||||||||||||||||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgt 17177081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 40131696 - 40131616
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||| ||| |||||||||| | || |||||| ||| ||||||||||||||||||||||||||| ||| |||||||    
T  40131696 gtgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgtatcagtgt 40131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 43001856 - 43001800
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtc 43001800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 3966578 - 3966503
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| ||||| || ||||||||||||| | |||||||||| |||| ||||||||| ||||||||||||| |||||    
T  3966578 gtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 7218271 - 7218326
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtc 7218326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 11686013 - 11685939
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| ||||||||| |||||||||||| | |||||||||||||||||| || ||| ||||||||||||| |||||    
T  11686013 gtgtccgacaccgaa-cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 16203795 - 16203854
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||||||||||||||| |||||| ||||||||||||| |||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtc 16203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 19552530 - 19552602
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||||| |||||| |||||||| ||  |||||| |||||||||||||||||||||||||| |||||||    
T  19552530 tgtctgacaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtc 19552602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 382
Target Start/End: Complemental strand, 14873636 - 14873527
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||          ||| | ||||||||||| | |||||||||||||||||||| ||||    
T  14873636 aagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgctttt 14873537  T
Q  373 ttcaaattat 382  Q
     |||||||||    
T  14873536 ctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 15382538 - 15382477
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtga--ttttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||| ||| |||||| |||  ||||||||||||||||||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtc 15382477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 19429541 - 19429440
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||| |||||| ||  |||||| ||||  |||||||| |||||||| |||||| ||||||   || ||||||||| |||||||||||| |||||||||    
T  19429541 aagcacagacacttcttggattagacgtgacccggtgtcagacaccgacacgacagcgacacagatatttacactaagttatgtgattttctcaaattat 19429442  T
Q  383 ta 384  Q
    ||    
T  19429441 ta 19429440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 22013458 - 22013414
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtc 22013414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 30183609 - 30183549
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||| ||  ||| ||||||| ||||||||||||||| ||||||    
T  30183609 acgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtc 30183549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 39205940 - 39205849
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc--agtgtcc-tgtctgtatccgtgcttcata 420  Q
    |||||||| |||| | |||||||||  |||||| ||||||| ||||||||||||| |||||   |||||| |||||||||||||||||||||    
T  39205940 acgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccgtgcttcata 39205849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 131816 - 131762
Alignment:
Q  339 cgacacttgtaattacactaaattat--gtgattttttcaaattattagctgtgt 391  Q
    |||| |||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  131816 cgacgcttgtaattacacttaattatatgtgattttttcaaattattagctgtgt 131762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 6035592 - 6035483
Alignment:
Q  284 agcacggacactcctccgattaggcgtgtaccg--gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 381  Q
    ||||| |||||||||| |||||||||||| |||  ||||| | |||||| ||||||||||||  | |||||||||| |||||| | | ||| ||||||||    
T  6035592 agcacagacactcctcagattaggcgtgtcccggcgtgtctgtcaccgacacgacaccgacaaatataattacactgaattatatta-tttctcaaatta 6035494  T
Q  382 ttagctgtgtc 392  Q
    ||||| |||||    
T  6035493 ttagcggtgtc 6035483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 392
Target Start/End: Complemental strand, 12160007 - 12159952
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||||||||||| ||||||||||| |||||| |||||||||| ||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtc 12159952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 12641749 - 12641682
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||||| | ||||||| ||||| || ||||| |||||||||||||||||||| |||||||||    
T  12641749 gtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattatta 12641682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 19820333 - 19820376
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca 326  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  19820333 aagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 28588674 - 28588725
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||| | |||||||||| |||||||||||||| |||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 30135372 - 30135313
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||| | | |||||||||| ||||||||||||||| ||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtc 30135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 36642746 - 36642821
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | | ||||||||||||| || |||||||||| ||||| | ||||||||||||||| |||||||    
T  36642746 gtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtc 36642821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 39758327 - 39758244
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtctgtatccgtgcttcata 420  Q
    |||||||| | |||||||||| |||||||||||||| | |||   ||||||||||| ||||| |||| ||||||||| ||||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaaaaatttagctgtgtccgtgtcgtgtccgtatccgtgtttcata 39758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 41091256 - 41091327
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    |||||| |||||| | |||||||||| |||||||||||||| |||||| |||||| ||||| ||||| ||||    
T  41091256 acgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtccgtgtcatgtc 41091327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 2437025 - 2436922
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||| ||||||||| ||||||||||||   ||||||||||||      ||||||||||| | |||| |||   ||||||||||||||| ||||||||    
T  2437025 aagcacgaacactcctcggattaggcgtgtcttggtgtcggacac------gacaccgacacatataatcacaacgaattatgtgatttttgcaaattat 2436932  T
Q  383 tagctgtgtc 392  Q
    |||| |||||    
T  2436931 tagcggtgtc 2436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 24273045 - 24273095
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  24273045 taattacactgaattatgtgattttctcaaattaataactgtgtcagtgtc 24273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 398
Target Start/End: Complemental strand, 24389169 - 24389119
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    |||||||||| |||||||||||||| |||||||| || |||||||||||||    
T  24389169 taattacactgaattatgtgattttctcaaattaataactgtgtcagtgtc 24389119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| | |||||||||| ||||| |||||||| ||||||||||||| ||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| | |||||||||| ||||| |||||||| ||||||||||||| ||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 4105373 - 4105264
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtga--ttttttc 375  Q
    ||||||||||||||||| |||||||||||| || || || |||||    |||  | || ||| ||||||||||||||||| ||||||||||  |||||||    
T  4105373 aagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatcttttttc 4105274  T
Q  376 aaattattag 385  Q
    ||||||||||    
T  4105273 aaattattag 4105264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 22423769 - 22423873
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| |||||||||||| | |       ||||||| ||||||||||||  | |||||| | | |||||||||||||| |||||||||    
T  22423769 aagcacggacactcctcggattaggcgtgtccag-------acaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattat 22423861  T
Q  383 tagctgtgtcag 394  Q
    |||  |||||||    
T  22423862 tagtagtgtcag 22423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 23221040 - 23220983
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| | | || |||||||||||||||||||| ||||||||||||| |||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtc 23220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 35017081 - 35017044
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  35017081 taattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 27144507 - 27144463
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||    
T  27144507 taattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 39268543 - 39268587
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  39268543 aagcacggacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 21814336 - 21814261
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||||||||| | ||||||||||  ||| ||||||||| | |||  ||||||||||||    
T  21814336 gtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtc 21814261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 23012410 - 23012461
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||| | |||||||| |||||||| ||||||| |||||||||||||    
T  23012410 acaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 27932282 - 27932235
Alignment:
Q  345 ttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  27932282 ttgtaattacactgaattatgtaattttctcaaattattagcggtgtc 27932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 386
Target Start/End: Original strand, 6326304 - 6326350
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||||||||| |||||||| ||||| |||||||| ||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagc 6326350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 374
Target Start/End: Complemental strand, 12199990 - 12199948
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||||||||||||||||||||  ||| ||||||||||||||||    
T  12199990 acgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 12927698 - 12927660
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  12927698 taattacactaaattatatgattttctcaaattattagc 12927660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||| | |||||||||| |||||||||||||| |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 6770583 - 6770538
Alignment:
Q  352 tacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||| |||||||||||||| | |||||||||| |||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgt 6770538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 14422961 - 14422907
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgt 389  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  ||||||||||||||    
T  14422961 cgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgt 14422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 22299492 - 22299544
Alignment:
Q  344 cttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||| ||| ||| |||||||||||| ||||||||||||||||| ||||    
T  22299492 cttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgt 22299544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 39695956 - 39696049
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||| |||||||||  |||||||||||| ||| ||||||||||||| ||||||||      | | ||||||||||||||| | ||||| |||||||||    
T  39695956 aagcaccgacactcctaggattaggcgtgtcccg-tgtcggacaccgacacgacacc------tatgattacactaaattatatcattttctcaaattat 39696048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 395
Target Start/End: Complemental strand, 2952309 - 2952265
Alignment:
Q  352 tacactaaattatgtgattttttc-aaattattagctgtgtcagt 395  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||    
T  2952309 tacactgaattatgtgattttttttaaattattagctgtgtcagt 2952265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 394
Target Start/End: Complemental strand, 4344784 - 4344740
Alignment:
Q  350 attacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||| |||||||| ||||||||||||||||| | |||||||    
T  4344784 attacactgaattatgtcattttttcaaattattatcggtgtcag 4344740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 15382592 - 15382556
Alignment:
Q  290 gacactcctccgattaggcgtgtaccggtgtcggaca 326  Q
    |||||||||| |||||||||||| |||||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggaca 15382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 16374341 - 16374393
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||| |||||||||||| | |||||| |||||||  ||||||||    
T  16374341 acgacaccgacacatgtaattacactgatttatgttatttttttcaattatta 16374393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 32766933 - 32767009
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    |||||||| |||||||  |||| | |||||||| | |||| || |||||| ||||||||||||| ||||| ||||||    
T  32766933 gacaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcggtgtcc 32767009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 35017157 - 35017113
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| ||| ||| ||||||    
T  35017157 aagcacggacactcctcggattaggcgtgtcccgatgttggacac 35017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 107)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 16766772 - 16766697
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16766772 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 16766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 21395262 - 21395365
Alignment:
Q  287 acggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||  |||||||||||| | |||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21395262 acggacactccttggattaggcgtgtcctggtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagc 21395360  T
Q  387 tgtgt 391  Q
     ||||    
T  21395361 ggtgt 21395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 9107354 - 9107429
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtc 9107429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 283 - 390
Target Start/End: Complemental strand, 31959264 - 31959161
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||    | | | ||||||||||||||||||||  |||||||||||||||||||||||    
T  31959264 aagcacggacactcctcggattaggtgtgtcccggtgtcggacac----atgtcgccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T
Q  383 tagctgtg 390  Q
    ||||||||    
T  31959168 tagctgtg 31959161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 17841534 - 17841648
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||    ||   | ||||||| ||||||||||||||||||||||||||||||||||||    
T  17841534 aagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaa 17841633  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  17841634 attattagctgtgtc 17841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 7930413 - 7930313
Alignment:
Q  285 gcacggacactcctccgattaggcgtgtaccggtgtcggacacc-gaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 383  Q
    ||||| |||||||||  ||||||||||| | ||||||||||||  || |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  7930413 gcacgaacactcctcgaattaggcgtgtcctggtgtcggacacgtgacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattatt 7930314  T
Q  384 a 384  Q
    |    
T  7930313 a 7930313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 9025450 - 9025553
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||      ||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  9025450 aagcacggacacttctcggattaggcgtgtcccggtgtcggacac------gacaccgacacatataattacactgaattatgtgattttctcaaattat 9025543  T
Q  383 tagctgtgtc 392  Q
    |||| |||||    
T  9025544 tagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 28715354 - 28715288
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtcc 28715288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 34595248 - 34595134
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||||| |||| |||||||| |||||    ||   | |||||||||||||||||||||||| |||||||||||||||||||    
T  34595248 aagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 34595149  T
Q  378 attattagctgtgtc 392  Q
    |||||||| ||||||    
T  34595148 attattagttgtgtc 34595134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 5970092 - 5970167
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  5970092 gtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 5970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 7977830 - 7977889
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtc 7977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 332 - 391
Target Start/End: Original strand, 10770673 - 10770732
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  10770673 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 10770732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 333 - 399
Target Start/End: Original strand, 403864 - 403929
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta-ctgtgtcaatgtcc 403929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 7938174 - 7938116
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtc 7938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 12696389 - 12696324
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtc 12696324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 3209441 - 3209381
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtc 3209381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 426514 - 426573
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtc 426573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 853859 - 853918
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtc 853918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 7801156 - 7801215
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 7801215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 8365503 - 8365578
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| || ||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  8365503 gtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtc 8365578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 9522960 - 9522898
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  9522960 gacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 397
Target Start/End: Complemental strand, 4878065 - 4877937
Alignment:
Q  274 atacctaataagcacggacactcctccgattaggcgtgtaccggtgtcggaca-----ccgaaacgacaccgacacttgtaattacactaaattatgtga 368  Q
    |||||||  ||||||||||||||||| |||||||||||| || ||||||||||     |     ||||||||||||||||||||| ||| ||||||||||    
T  4878065 atacctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtga 4877967  T
Q  369 -ttttttcaaattattagctgtgtcagtgt 397  Q
     |||||||||||||||||||||||| ||||    
T  4877966 cttttttcaaattattagctgtgtcggtgt 4877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 16833365 - 16833308
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtc 16833308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 28152212 - 28152099
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||| ||||||||| |||||||| ||| ||||||||||||||    ||   | |||||||||||||||||||||||| ||||||||||| |||||||    
T  28152212 aagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaa 28152114  T
Q  378 attattagctgtgtc 392  Q
    |||||||||| ||||    
T  28152113 attattagctttgtc 28152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 31384980 - 31384927
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  31384980 acgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 8714055 - 8713979
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  8714055 gtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtc 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 391
Target Start/End: Original strand, 9911527 - 9911587
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattt-tttcaaattattagctgtgt 391  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  9911527 acgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 32978899 - 32978959
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtg-attttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtc 32978959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 8776973 - 8777032
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtc 8777032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 1191706 - 1191759
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtc 1191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 1681811 - 1681758
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtc 1681758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 6898281 - 6898342
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||||||||||  |||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcag 6898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 9195738 - 9195806
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| |||||| | ||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  9195738 gtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 25038055 - 25038131
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    |||||||||||| | || | ||||||| |||||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  25038055 gtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtca 25038131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 32511611 - 32511727
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca-----ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||     |  |  ||||||| |||||| |||||||||| |||||||||||||| | ||    
T  32511611 aagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaa 32511710  T
Q  378 attattagctgtgtcag 394  Q
    ||||||||| |||||||    
T  32511711 attattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 34225824 - 34225876
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcct 400  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtcagtgtcct 34225876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 7086852 - 7086801
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 24645539 - 24645480
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtc 24645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 33001289 - 33001348
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||||| | |||||||||||||||||||||||||||| |||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtc 33001348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 7265593 - 7265651
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| | |||||||||| |||||||||||||| ||||||||||||| ||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 10842574 - 10842532
Alignment:
Q  350 attacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtc 10842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 15489733 - 15489791
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||| | |||| ||| |||||||||||||||||| ||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtc 15489791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 7151472 - 7151419
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||| |||| | |||||||||| |||||||||||||||||||||||||||    
T  7151472 acgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 25010212 - 25010261
Alignment:
Q  343 acttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| || || ||||||||||||||||||||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtc 25010261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 392
Target Start/End: Complemental strand, 26562758 - 26562689
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| |||||| |||||| | |||||||||| |||||||||||||| ||||||| ||||| |||||    
T  26562758 gacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtc 26562689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 3398678 - 3398619
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||| |||||||||| |||||| |||||||| ||||||||||||||||||    
T  3398678 acgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtc 3398619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 6327518 - 6327578
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| || |||||    
T  6327518 cgacatcgacacttgtaattacacttaattatataattttttcaaattattaactatgtca 6327578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 18252750 - 18252802
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||| |||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  18252750 acgataccgacacctgtaattacactaaattatgtcatttttttaaattatta 18252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 5732510 - 5732561
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||| | ||||||||||||| ||||||||||| |||||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattatta 5732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 9617509 - 9617442
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||||||  ||||||||||||| | |||||||| | |||||||||||||| |||||||||||    
T  9617509 gtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 10339059 - 10339102
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca 326  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  10339059 aagcacggacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 17302609 - 17302554
Alignment:
Q  340 gacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtcag 394  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcag 17302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 17435250 - 17435199
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||| ||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtc 17435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 19040411 - 19040352
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| ||||| | |||||||||| |||||||||||||| ||||||||||||| |||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 34073337 - 34073400
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||| ||||||||||| | | |||||||||| ||||||| |||||| |||||||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagc 34073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 34290048 - 34290136
Alignment:
Q  302 attaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||  ||||||||||||| || ||||||||||||| |  ||||||||| |||||||||||| |  ||||||||||| ||||||    
T  34290048 attagacgtgtctcggtgtcggacactgacacgacaccgacacat--aattacactgaattatgtgattctcgcaaattattagttgtgtc 34290136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 329
Target Start/End: Original strand, 8389413 - 8389459
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccg 329  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  8389413 aagcacggacactcctcggattaggtgtgtcccggtgtcggacaccg 8389459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 8805587 - 8805625
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8805587 taattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 392
Target Start/End: Complemental strand, 9027273 - 9027178
Alignment:
Q  291 acactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtg 390  Q
    ||||||||  |||||| ||||| ||||||||||||||      ||||||||||| | |||||||||  |||||||||||| | ||||||||||||| |||    
T  9027273 acactccttggattagccgtgtcccggtgtcggacac------gacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtg 9027180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 28862231 - 28862129
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaatt-atgtgattttttcaaatta 381  Q
    |||||||||||| ||||  |||||| |||| || ||||| |||||| | ||||||||||||| | | |||||||| |||| |||| ||||| ||||||||    
T  28862231 aagcacggacacgcctcgaattaggtgtgtcccagtgtcagacaccaacacgacaccgacacatatgattacactgaattaatgtcattttatcaaatta 28862132  T
Q  382 tta 384  Q
    |||    
T  28862131 tta 28862129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 1700411 - 1700362
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||||||||||||| |||||||||| || ||||||||||||| |||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 7973714 - 7973665
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 381  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| ||||||    
T  7973714 acgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 8931592 - 8931661
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||| |||||| |||||| | |||||| ||| |||||||| ||||| ||||||| |||||||||||    
T  8931592 gacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtc 8931661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 24115831 - 24115908
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||| || |||||||||||||| |||  | |||||| | | |||||||||||||||| |||||||||| ||||||||    
T  24115831 gtgtcagataccgaaacgacaccaacatatataattatattgaattatgtgattttttgaaattattagttgtgtcag 24115908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 7723204 - 7723309
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||||||||||||| ||||||||||||  | ||     ||||||| |||||||||| || | ||||||  || |||||| ||||||| |||||||||    
T  7723204 aagcacggacactcctcggattaggcgtgtttccgta----acaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattat 7723299  T
Q  383 tagctgtgtc 392  Q
    |||| |||||    
T  7723300 tagcagtgtc 7723309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 10888989 - 10889033
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||    
T  10888989 taatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 17327595 - 17327714
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----------cgaaacgacaccgacacttgtaattacactaaattatgtgatttt 372  Q
    ||||||||||||||||| |||||||||||| || ||||| |||||          ||| ||||||| ||||| | || ||||||||||||||||||||||    
T  17327595 aagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgatttt 17327694  T
Q  373 ttcaaattattagctgtgtc 392  Q
     ||||| | |||| ||||||    
T  17327695 ctcaaaatcttagttgtgtc 17327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 388
Target Start/End: Complemental strand, 2224273 - 2224230
Alignment:
Q  345 ttgtaattacactaaattatgtgattttttcaaattattagctg 388  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattagctg 2224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 5462730 - 5462675
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcctgtc 403  Q
    |||||||| | |||||||||||||| ||||||||||| | ||||||||||| ||||    
T  5462730 taattacaatgaattatgtgattttctcaaattattaacggtgtcagtgtcgtgtc 5462675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 7378038 - 7377979
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||||| | |||||||||||||| ||||||| ||||| |||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 7938214 - 7938167
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccga 330  Q
    ||||||||||||||||| ||| ||||||||  ||||||||||||||||    
T  7938214 aagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccga 7938167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 7996378 - 7996437
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| | | |||||||||| |||||| ||||||| ||||||||||||| |||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtc 7996437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 8022423 - 8022364
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| | | |||||||||| |||||| ||||||| ||||||||||||| |||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtc 8022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 9629442 - 9629383
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||||| | |||||||||||||| |||||||||| || |||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 383
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatt 383  Q
    |||||||||| |||||||||||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 16488574 - 16488649
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||||||||| | ||||||||||  ||| ||||||||| | |||  ||||||||||||    
T  16488574 gtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtc 16488649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 18367911 - 18367836
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||||||||| | ||||||||||  ||| ||||||||| | |||  ||||||||||||    
T  18367911 gtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtc 18367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 21924935 - 21924994
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||| | |||||||||| |||||| |||| || ||||||||||||| |||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtc 21924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 25096469 - 25096430
Alignment:
Q  346 tgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  25096469 tgtaattacactagattatgtgattttctcaaattattag 25096430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 31429004 - 31429059
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctg 388  Q
    |||||| ||| ||||||||||||| |||||||||| |||||| |||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttttttaaattattagctg 31429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 2117129 - 2117083
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||| ||||| || | |||||||||||||||||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 6214620 - 6214566
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||| | |||||||||| ||||||||| |||||| |||||| ||||    
T  6214620 acgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagc 6214566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 7027301 - 7027251
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattat 382  Q
    |||||||||||| | |||||||||| |||||||||||| ||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattat 7027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 10827551 - 10827613
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| || ||||||| || | ||||||||||||||  ||||||||||| |||||||||||||    
T  10827551 gacacagatacgacactgatatttgtaattacactatgttatgtgatttcttcaaattattag 10827613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 14784931 - 14784981
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||    
T  14784931 acgacactgacacgtgtaaatacaccaaattatgtgaatttttcaaattat 14784981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 16111751 - 16111809
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||| ||||||| ||||| | ||||||||||||||||||| |||| |||||| ||||||    
T  16111751 ccgacacgacactgacacctataattacactaaattatgtaatttattcaaactattag 16111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 26178623 - 26178661
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtc 321  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  26178623 aagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 7625230 - 7625130
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||| ||||||||  ||||| |||||| |||||||||||||| |   |||||||||  | | |||||| |||||||||| | ||||| |||||||||    
T  7625230 aagcacgaacactccttggattaagcgtgttccggtgtcggacac-gcgccgacaccgattcctataattatactaaattatatcattttctcaaattat 7625132  T
Q  383 ta 384  Q
    ||    
T  7625131 ta 7625130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 9658936 - 9658879
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||  | |||||||||| |||||||||||||| | ||||||||||| |||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 398
Target Start/End: Original strand, 14155239 - 14155304
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 398  Q
    ||||||| |||| |||||| |||||  ||||||||||||| ||||||||| | | |||||||||||    
T  14155239 cgacaccaacacatgtaatcacactgtattatgtgattttctcaaattatgatcggtgtcagtgtc 14155304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 24138483 - 24138426
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| || | ||| |||||| |||||| ||||||||||||||||||||| |||||    
T  24138483 acaccgatacatataaatacacttaattatatgattttttcaaattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 26402680 - 26402721
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 27904037 - 27904097
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtg--attttttcaaattattagctgtgtc 392  Q
    |||||||||| ||||||||||||| |||||||||   |||||| |||||||||||| ||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtc 27904097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||| | |||||||| | |||||||||||||| ||||||||||||| ||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 7248483 - 7248439
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||| | ||||| ||||||||||||||    
T  7248483 aagcacggacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 8776913 - 8776957
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||||    
T  8776913 aagcacggacactcctcggattaggtgtgtctcggtgtcggacac 8776957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 12627577 - 12627629
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| |||||| | | |||||||| |||||||||||||||||| ||||||||    
T  12627577 cgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 16766822 - 16766778
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||| || || |||||||||||| ||||||||||||||    
T  16766822 aagcacggacattcttcggattaggcgtgtcccggtgtcggacac 16766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 17302391 - 17302347
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||| ||||||||||||||| | |||||||||| ||||||    
T  17302391 taattacacaaaattatgtgattttcttaaattattagttgtgtc 17302347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 397
Target Start/End: Original strand, 19147431 - 19147467
Alignment:
Q  361 ttatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  19147431 ttatgtgattttctcaaattattagctgtgtccgtgt 19147467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 31385044 - 31385000
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||  |||||||||||| ||||||| ||||||    
T  31385044 aagcacggacactccttggattaggcgtgtcccggtgtaggacac 31385000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 31579240 - 31579276
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| |||||||||||||| |||||||||||    
T  31579240 taattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 33340370 - 33340434
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||| |||||||  ||||||  ||||||| |||||||| |||| ||||||||||||| |||||||    
T  33340370 tgtccgacaccggcacgacaatgacacttataattacagtaaaatatgtgatttttttaaattat 33340434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 35125728 - 35125664
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    |||| |||||||  ||||||  ||||||| |||||||| |||| ||||||||||||| |||||||    
T  35125728 tgtccgacaccggcacgacaatgacacttataattacagtaaaatatgtgatttttttaaattat 35125664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 7e-26; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 2438664 - 2438780
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca-----ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| |||||||||||| |||||||||||||     |     ||||||||||||||||||||||||| |||||||||||||||| ||    
T  2438664 aagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaa 2438763  T
Q  378 attattagctgtgtcag 394  Q
    |||||||||||||||||    
T  2438764 attattagctgtgtcag 2438780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 23058388 - 23058494
Alignment:
Q  282 taagcacggacactcctccgattaggcgtgtaccggtgtcggaca---ccgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttcaa 377  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||   |||| ||||||||||||||||||||||||||  ||||||||| |||||||||    
T  23058388 taagcacggacacttctcggattaggcgtgtcccggtgtcggacaacaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaa 23058487  T
Q  378 attatta 384  Q
    |||||||    
T  23058488 attatta 23058494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 37559091 - 37558977
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccga--aa---cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||     ||   ||||||||||||||||||||||| | ||||||||||||||| |||    
T  37559091 aagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaa 37558992  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  37558991 attattagctgtgtc 37558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 20539673 - 20539733
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20539673 acgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtc 20539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 18840958 - 18841074
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||     ||   | |||||||||||||||||||||||| |||||||| ||||||||||    
T  18840958 aagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaa 18841057  T
Q  378 attattagctgtgtcag 394  Q
    |||||||| ||||||||    
T  18841058 attattagttgtgtcag 18841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 30717514 - 30717589
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  30717514 gtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtc 30717589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 11223847 - 11223924
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||| |||||| | | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  11223847 gtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcag 11223924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 290 - 392
Target Start/End: Original strand, 14996171 - 14996283
Alignment:
Q  290 gacactcctccgattaggcgtgtaccggtgtcggacac---------cgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttcaaat 379  Q
    |||||||||| |||||||||||| |||||||| |||||         ||| | ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgtgtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaat 14996270  T
Q  380 tattagctgtgtc 392  Q
    |||||||||||||    
T  14996271 tattagctgtgtc 14996283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 18255980 - 18256044
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtcagtgt 18256044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 30335476 - 30335417
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtc 30335417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 37419818 - 37419752
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 383  Q
    ||||| |||||||| ||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  37419818 gtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 38117104 - 38117218
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaa-----cgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||          ||||||| ||||||||||||||||  || ||||||||||||||||    
T  38117104 aagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaa 38117203  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  38117204 attattagctgtgtc 38117218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 974807 - 974747
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||    
T  974807 acgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtc 974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 19536397 - 19536457
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtga-ttttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtc 19536457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 21374706 - 21374758
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtc 21374758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 21624374 - 21624266
Alignment:
Q  285 gcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatg-tgattttttcaaattatt 383  Q
    ||||||||||||||  ||||||| |||| ||| ||||||||||     ||||||||||||||||||||||||| ||||||| |  |||||| ||||||||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggacacgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattatt 21624275  T
Q  384 agctgtgtc 392  Q
    |||||||||    
T  21624274 agctgtgtc 21624266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 12668416 - 12668475
Alignment:
Q  326 accgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  12668416 accgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 30404850 - 30404901
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 399
Target Start/End: Complemental strand, 44860380 - 44860313
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    ||||||||||||| | |||||||||| ||||||| |||||| ||||||||||||| ||||||||||||    
T  44860380 acgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcagtgtcc 44860313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 4882680 - 4882749
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||| |||||||| |||||| ||||||||||||||||||| |||||| | |||||||||||| ||||||    
T  4882680 gtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 15657924 - 15657871
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  15657924 acgacaccgacatttgtaattacactgaattatgtgatttttacaaattattag 15657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 36756343 - 36756403
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||| |||||||||| |||||||| |||| ||||||||||||| ||||||    
T  36756343 acgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtc 36756403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 5040793 - 5040735
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgatt--ttttcaaattattagctgt 389  Q
    ||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgt 5040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 392
Target Start/End: Complemental strand, 6940310 - 6940255
Alignment:
Q  337 accgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtc 6940255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 15972932 - 15972881
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 18422022 - 18421971
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattatta 18421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 18622716 - 18622613
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacacc-gaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 381  Q
    ||||||||||||||||| ||||| | |||| ||||||| |||||   || |||||||| |||| | |||||||||| |||||||||||||| | ||||||    
T  18622716 aagcacggacactcctcggattaagtgtgtcccggtgtaggacatatgacacgacaccaacacgtataattacactgaattatgtgattttattaaatta 18622617  T
Q  382 ttag 385  Q
    ||||    
T  18622616 ttag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 26769586 - 26769511
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| || ||||| | ||||||||||||||||||||||| | || ||||||| ||||||||||||||| ||||||    
T  26769586 gtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtc 26769511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 12940941 - 12940995
Alignment:
Q  339 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtca 12940995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 18631356 - 18631473
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtga-ttttttcaaatta 381  Q
    |||| ||||||||||||  ||||||||||| || ||||| |||||||| |||| || || || | |||||||| | ||| |||||| |||||||||||||    
T  18631356 aagctcggacactcctcgcattaggcgtgtcccagtgtctgacaccgatacgatactgatacatataattacattgaatgatgtgatttttttcaaatta 18631455  T
Q  382 ttagctgtgtcagtgtcc 399  Q
    ||||  |||| |||||||    
T  18631456 ttagaggtgttagtgtcc 18631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 24894454 - 24894389
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| |||| ||| |||||| ||||| |||| |||||||||||||||| |||||||||||||||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtc 24894389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 33153484 - 33153431
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||| |||||    
T  33153484 acgacacggacacttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 4207931 - 4207852
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||| |||| ||||||| |  |||||||||||||||||| | |||||||||||||||||  ||||||||||    
T  4207931 gtgtccgacaccgacacgataccgacaata-taattacactaaattatgcgcttttttcaaattattagtggtgtcagtgt 4207852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 28677953 - 28677909
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 34784966 - 34785046
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| || ||||| ||||||||||||| | ||||||||||||||||||||||||| | |||  ||||| |||||| ||||    
T  34784966 gtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgt 34785046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 36409642 - 36409686
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtc 36409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 37419868 - 37419824
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  37419868 aagcacggacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 39323316 - 39323264
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtc 39323264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 44635607 - 44635520
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaac-gacaccgacacttgtaattacactaaattatgtgatt 370  Q
    ||||||||||||||||| ||||||||||||  ||||||||    |||| || |||||||||||||||||||||||| ||||| ||||||    
T  44635607 aagcacggacactcctcagattaggcgtgtctcggtgtcgtgt-ccgacaccgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 20473381 - 20473322
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| ||||||||||||||||||| |||||| ||| ||||| |||||||||| ||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtc 20473322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 34337165 - 34337235
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| | ||||||||||||||||||||     |||||||||||||||||||||||| | |||||||    
T  34337165 gtgtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtc 34337235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 42832277 - 42832340
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||||||| |||||||||| || ||||| ||||| ||||||||||||| ||||| ||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgt 42832340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 31018649 - 31018591
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| | |||||||||||||| |||||||||| | ||||||||||| ||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 23718082 - 23718021
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||| | |||||||||| |||||||||| ||| ||||||||||||| ||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 23718021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 24105754 - 24105693
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||||| | |||||||||| |||||||||| ||| ||||||||||||| ||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 24105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 29176495 - 29176552
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| |||||||||| ||||||||||  |||||||||||||| |||||||    
T  29176495 acaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtc 29176552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 29367337 - 29367382
Alignment:
Q  326 accgaaacgacaccgacacttgtaattacactaaattatgtgattt 371  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||||    
T  29367337 accgacacgataccgacatttgtaattacactaaattatgtgattt 29367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 34691805 - 34691858
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||| | |||||||||| |||||| ||||||| |||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 34714217 - 34714270
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    |||||||||||| | |||||||||| |||||| ||||||| |||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 5367251 - 5367199
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    |||||||||||| | |||||||||| |||||||||||||  ||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 18420436 - 18420492
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    |||||||||||| ||||| || | |||||||||||||| ||||||||||||| ||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgt 18420492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 21616806 - 21616762
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 21782833 - 21782877
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtc 21782877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 26769636 - 26769592
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  26769636 aagcacggacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 30527594 - 30527646
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||| |||||||| | ||||||||||||||||| ||||||| |||||||||||    
T  30527594 acgataccgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 40361769 - 40361805
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40361769 taattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 11223798 - 11223841
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca 326  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||    
T  11223798 aagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 21091781 - 21091718
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||||||||||||| || ||||| ||||| | ||||||||||| ||||| ||||    
T  21091781 gacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgt 21091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 37411244 - 37411303
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | |||| ||||| |||||||||||||| ||||||||||||| |||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 18276579 - 18276521
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||   |||||||||| ||||| |||||||| ||||||||||||| |||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 31808134 - 31808072
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    |||| ||||| | |||||||||| |||||||||||||| | ||||||||||| ||||| ||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgt 31808072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 34221502 - 34221556
Alignment:
Q  338 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||| ||   ||||||||  ||||||||||||||||||||||||    
T  34221502 ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtc 34221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 384
Target Start/End: Complemental strand, 36281727 - 36281693
Alignment:
Q  350 attacactaaattatgtgattttttcaaattatta 384  Q
    ||||||||||||||||||||||| |||||||||||    
T  36281727 attacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 2665903 - 2665940
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  2665903 taattacactaaattatgtgattttctaaaattattag 2665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 386
Target Start/End: Original strand, 3415014 - 3415043
Alignment:
Q  357 taaattatgtgattttttcaaattattagc 386  Q
    ||||||||||||||||||||||||||||||    
T  3415014 taaattatgtgattttttcaaattattagc 3415043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 12224282 - 12224226
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtga--ttttttcaaattattagct 387  Q
    ||||||||||||||||||||||| |  |||||| ||  |||||||||||||||||||    
T  12224282 cgacaccgacacttgtaattacattggattatgggattttttttcaaattattagct 12224226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 420
Target Start/End: Complemental strand, 27084295 - 27084231
Alignment:
Q  359 aattatgtgattttttcaaattattagctgtgtc--agtgtcc-tgtctgtatccgtgcttcata 420  Q
    |||||| ||||||| ||||||||||||| |||||  ||||||| |||| ||||||||||||||||    
T  27084295 aattatatgattttctcaaattattagcagtgtcggagtgtccgtgtccgtatccgtgcttcata 27084231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 38442366 - 38442309
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtg 390  Q
    |||||||||||||| |||||| | | |||||||||||||||| |||| ||||| ||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg 38442309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 39026875 - 39026822
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctg 388  Q
    ||||||||| || |||||||| |||| ||||||||||| |||| ||||||||||    
T  39026875 acaccgacatttataattacattaaaatatgtgattttctcaagttattagctg 39026822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  335 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| |||||||||| | |||||||| ||||| |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 18889592 - 18889644
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 386  Q
    ||||||||||| | | |||||||| |||||||||||||| |||| ||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagc 18889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 19942379 - 19942335
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||| ||||||||||| |||||||||||| |||||||| |||||    
T  19942379 aagcatggacactcctcggattaggcgtgtcccggtgtcagacac 19942335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 23354669 - 23354713
Alignment:
Q  350 attacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||||||||||||| | ||||| ||||||||||| |||||||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcag 23354713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Complemental strand, 28412394 - 28412358
Alignment:
Q  348 taattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||| |||||||||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 35056943 - 35056883
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||| |||||||| ||||||||||||| | |||||||||| |||||| || |||| ||||    
T  35056943 gtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 35056993 - 35056949
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||    
T  35056993 aagcacggacactcctcagattaggcgtgtttccgtgtcggacac 35056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 42511327 - 42511371
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||||||| |||||| ||||| || |||||||||||    
T  42511327 aagcacggacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 17750 - 17810
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcag 17810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 20239 - 20172
Alignment:
Q  325 caccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 20172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 407 - 521
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||    ||   | |||||||||||||||||||||||| |||| ||||||||||||||    
T  407 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaa 506  T
Q  378 attattagctgtgtc 392  Q
    ||||||||| |||||    
T  507 attattagcagtgtc 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 8912 - 8798
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaa 377  Q
    ||||||||| ||||||| ||||||||||||  |||||||||||||    ||   | |||||||||||||||||||||||||||| || ||||||||||||    
T  8912 aagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaa 8813  T
Q  378 attattagctgtgtc 392  Q
    |||||||||||||||    
T  8812 attattagctgtgtc 8798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 241669 - 241594
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||| | ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  241669 gtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtc 241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 241719 - 241675
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||    
T  241719 aagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 7032 - 7091
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 51862 - 51811
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 51811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 46741 - 46682
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 46682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 23830 - 23764
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgatt-ttttcaaattattagctgtgtcagtgt 397  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||    
T  23830 acgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgt 23764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 341 - 420
Target Start/End: Original strand, 7319 - 7402
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc--agtgtcc--tgtctgtatccgtgcttcata 420  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||||   ||||||  |||||||||||||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcata 7402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 283 - 420
Target Start/End: Complemental strand, 14641 - 14498
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccga---cacttgtaattacactaaattatgtgattttttcaaat 379  Q
    ||||||| |||||||| |||||||||||||  |||||||||||| ||   ||   ||||   |||||||||||||||| |||||||||||||||||||||    
T  14641 aagcacgtacactccttcgattaggcgtgtctcggtgtcggaca-cgtgtcgtgtccgacaccacttgtaattacactgaattatgtgattttttcaaat 14543  T
Q  380 tattagctgtgtc--agtgtcc--tgtctgtatccgtgcttcata 420  Q
    |||||| ||||||   ||||||  |||| ||||||||||||||||    
T  14542 tattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcata 14498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 130538 - 130482
Alignment:
Q  336 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtc 130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 4826 - 4948
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac----cg---aaacgacaccgacacttgtaattacactaaattatgtga-tttttt 374  Q
    ||||||||||||||||| |||||||||||| || ||||||||||     ||   | | |||||| ||||||||||||||||| |||||||||| ||||||    
T  4826 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttt 4925  T
Q  375 caaattattagctgtgtcagtgt 397  Q
     ||||||||||||||||| ||||    
T  4926 taaattattagctgtgtcggtgt 4948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 3833 - 3900
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    ||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  3833 gtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 70337 - 70278
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||| |||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 397
Target Start/End: Original strand, 135268 - 135376
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 382  Q
    ||||||| |||| |||| |||||||||||| | ||||||||||||      ||||||||||| | |||||||||  |||||||||||||| |||||||||    
T  135268 aagcacgaacacgcctcagattaggcgtgtcctggtgtcggacac------gacaccgacacatataattacacagaattatgtgattttctcaaattat 135361  T
Q  383 tagctgtgtcagtgt 397  Q
    |||| ||||| ||||    
T  135362 tagcagtgtcggtgt 135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 71800 - 71723
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatt--ttttcaaattattagctgtgtc 392  Q
    ||||| |||||||| ||||||| |||||| ||||||||||| |||| |||||||  ||||||||||||||||||||||    
T  71800 gtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtc 71723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 71850 - 71806
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||| |||||||||| |||||| ||||| ||||||||||||||    
T  71850 aagcaccgacactcctcggattagtcgtgtcccggtgtcggacac 71806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 263356 - 263430
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||| |||||||| ||||||| ||||||| |||||||||| ||||||||| |||| ||||||||||||| ||||    
T  263356 gtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgt 263430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 25767 - 25828
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtca 393  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||||| | ||||||    
T  25767 acgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtca 25828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 23586 - 23529
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    ||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  23586 gtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 23485 - 23420
Alignment:
Q  327 ccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||  | |||||| |||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtc 23420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 53254 - 53189
Alignment:
Q  318 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 383  Q
    |||| |||||||| ||| ||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  53254 tgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 24099 - 24020
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||| |||||||| ||||||| || ||| ||||||||||||||||||| |||||||  ||||||||||||||||| ||||    
T  24099 gtgtccgacaccgacacgacactgaaact-gtaattacactaaattatgagatttttgaaaattattagctgtgtcggtgt 24020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 8619 - 8694
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||| || ||||| |||||||||||| ||||||||| ||  ||||||||||| ||||||||||||||| ||||||    
T  8619 gtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtc 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 8569 - 8613
Alignment:
Q  283 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||||  |||||||||||||| |||||||||||    
T  8569 aagcacggacactcctcgaattaggcgtgtaccagtgtcggacac 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 13459 - 13400
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| ||||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtc 13400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 21868 - 21927
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||| ||||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtc 21927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 392
Target Start/End: Original strand, 33375 - 33422
Alignment:
Q  345 ttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtc 33422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 178819 - 178878
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatg-tgattttttcaaattattagctgtgtc 392  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtc 178878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 192256 - 192300
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattatta 192300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 394
Target Start/End: Original strand, 44516 - 44586
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||||| |||| |||||||| | |||||||||| |||||||||||||| ||||||| ||||| |||||||    
T  44516 acaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcag 44586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 123686 - 123626
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtga---ttttttcaaattattagctgtgt 391  Q
    |||||||||||||||||||||||| ||||||||||   |||||| ||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgt 123626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 92859 - 92807
Alignment:
Q  340 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtc 92807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 83220 - 83172
Alignment:
Q  332 acgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 380  Q
    |||||||||||| ||||||||||||| |||||||| ||||||| |||||    
T  83220 acgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 3003 - 2946
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    ||||| || ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  3003 gtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 3052 - 3009
Alignment:
Q  284 agcacggacactcctccgattaggcgtgtaccggtgtcggacac 327  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacac 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 63831 - 63774
Alignment:
Q  334 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 391  Q
    ||||||||||||||||||| |||| |||||||| ||||| ||||||||||||| ||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 9731 - 9799
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||| |||||| | ||||||||||||| | |||||||||| ||||| |||||||| ||||||||||||    
T  9731 gtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 324 - 399
Target Start/End: Complemental strand, 6380 - 6305
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtcc 399  Q
    ||||||| ||||||||||||| | |||||||| | |||||||  ||||| ||||||||||||| ||||| ||||||    
T  6380 acaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtccgtgtcc 6305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 8068 - 8010
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 392  Q
    |||||||||||||| ||||||||||  ||||| |||||||||||||||||||| ||||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtc 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 7632 - 7538
Alignment:
Q  281 ataagcacggacactcctccgattaggcgtgtaccggtgtcggacac-cgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 374  Q
    |||| |||| |||||| || ||||||| || | | |||||||||||| ||| || ||| ||||| || |||||| ||||||||||||||||||||    
T  7632 ataaacacgaacactcttcagattaggtgtatcctggtgtcggacacgcgacacaacatcgacatttataattatactaaattatgtgatttttt 7538  T

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Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 1103 - 1030
Alignment:
Q  324 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 397  Q
    ||||||| || |||| ||||| | || ||||||| |||||||| ||||||||||||||||||| ||||| ||||    
T  1103 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 1030  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 384
Target Start/End: Original strand, 68232 - 68293
Alignment:
Q  323 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||| ||||||| ||||| | |||||| |||||||||| ||||||| |||||||||||    
T  68232 gacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattatta 68293  T

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Target: scaffold0246 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 19626 - 19583
Alignment:
Q  341 acacttgtaattacactaaattatgtgattttttcaaattattag 385  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattattag 19583  T

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Target: scaffold0697 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 1703 - 1652
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 384  Q
    |||||||||||||| |||||| || ||||||| ||||||| |||||||||||    
T  1703 cgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 21118 - 21041
Alignment:
Q  317 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 394  Q
    ||||| |||||||| |||| |||||||| | |||||| ||  | |||||||||||| ||||||||||| | |||||||    
T  21118 gtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcag 21041  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 366
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  333 cgacaccgacacttgtaattacactaaattatgt 366  Q
    ||||||||||||||||||||||||| ||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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