View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8984_high_13 (Length: 397)

Name: NF8984_high_13
Description: NF8984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8984_high_13
NF8984_high_13
[»] chr4 (4 HSPs)
chr4 (16-183)||(51703021-51703193)
chr4 (220-288)||(51703342-51703410)
chr4 (184-224)||(51703222-51703262)
chr4 (251-321)||(26341349-26341420)
[»] chr2 (4 HSPs)
chr2 (27-183)||(32394525-32394683)
chr2 (217-301)||(32394298-32394382)
chr2 (184-224)||(32394456-32394496)
chr2 (260-322)||(23244827-23244889)
[»] chr3 (4 HSPs)
chr3 (27-183)||(53466804-53466961)
chr3 (217-321)||(37916240-37916344)
chr3 (218-319)||(53466559-53466660)
chr3 (253-324)||(4775333-4775403)
[»] chr5 (8 HSPs)
chr5 (217-323)||(19119618-19119724)
chr5 (218-324)||(42942618-42942724)
chr5 (260-324)||(6437367-6437431)
chr5 (280-324)||(17277760-17277804)
chr5 (251-321)||(6052576-6052647)
chr5 (222-283)||(43600585-43600646)
chr5 (222-283)||(43606077-43606138)
chr5 (222-283)||(43611569-43611630)
[»] chr7 (4 HSPs)
chr7 (217-324)||(9146921-9147027)
chr7 (217-324)||(32949783-32949890)
chr7 (273-302)||(7831655-7831684)
chr7 (256-301)||(31076936-31076981)
[»] chr6 (3 HSPs)
chr6 (221-324)||(26541555-26541658)
chr6 (220-323)||(2946637-2946740)
chr6 (251-321)||(24063868-24063939)
[»] chr1 (3 HSPs)
chr1 (260-323)||(3929174-3929237)
chr1 (273-302)||(36930173-36930202)
chr1 (273-301)||(43250898-43250926)
[»] chr8 (3 HSPs)
chr8 (121-178)||(5979636-5979693)
chr8 (218-289)||(5981959-5982031)
chr8 (71-116)||(6374145-6374190)


Alignment Details
Target: chr4 (Bit Score: 141; Significance: 8e-74; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 51703021 - 51703193
Alignment:
Q  16 ggcgcttctgctaacagttaaagtaacaattagcaattt-----tattttaatcaaaatcgtttttcatgaaatcagatcaaaaagctcaaataacagtc 110  Q
    ||||||||||||||| |||||||||||||||||||||||     |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  51703021 ggcgcttctgctaacggttaaagtaacaattagcaattttattttattttaatcaaaatcgtttttcatgaaattagaccaaaaagctcaaataacagtc 51703120  T
Q  111 atcaattagcttagctttatgttgatttggagctgacagatatcgattgagatagccatagccattgggacat 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51703121 atcaattagcttagctttatgttgatttggagctgacagatatcgattgagatagccatagccattgggacat 51703193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 51703342 - 51703410
Alignment:
Q  220 ccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51703342 ccatttaaagtgtgccttttaatgtgagccattcattttaatccaaggatcattatttgttcctctcat 51703410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 51703222 - 51703262
Alignment:
Q  184 agagaaggaagattctggagaccttattgccaattgccatt 224  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51703222 agagaaggaagattctggagaccttattgccaattgccatt 51703262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 26341349 - 26341420
Alignment:
Q  251 ttcattttaatccaagggtcattatttgttcctctcatcctctcattataacac-tcatttcatttgataca 321  Q
    |||||||| ||||||||||||| || | ||||||||| |||||||||||||||| || | ||||||||||||    
T  26341349 ttcattttcatccaagggtcataatctattcctctcaccctctcattataacacttcctctcatttgataca 26341420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 32394683 - 32394525
Alignment:
Q  27 taacagttaaagtaacaattagcaattttattttaat--caaaatcgtttttcatgaaatcagatcaaaaagctcaaataacagtcatcaattagcttag 124  Q
    ||||| ||| |||||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  32394683 taacaattatagtaacaattagcaattttattttaatatcaaaatcgtttttcatgaaattagaccaaaaagctcaaataacagtcatcaattagcttag 32394584  T
Q  125 ctttatgttgatttggagctgacagatatcgattgagatagccatagccattgggacat 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32394583 ctttatgttgatttggagctgacagatatcgattgagatagccatagccattgggacat 32394525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 32394382 - 32394298
Alignment:
Q  217 ttgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataa 301  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32394382 ttgccatttaaagtatgccttttaatgtgagccattcattttaatccaagggtcattatatgttcctctcatcctctcattataa 32394298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 32394496 - 32394456
Alignment:
Q  184 agagaaggaagattctggagaccttattgccaattgccatt 224  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  32394496 agagaaggaagattctggagaccttattgccaattaccatt 32394456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 23244889 - 23244827
Alignment:
Q  260 atccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttgatacac 322  Q
    |||||| |||||  ||||| || ||||| |||||||||||||||||| | |||||||||||||    
T  23244889 atccaatggtcaccatttgatcatctcaccctctcattataacactcctctcatttgatacac 23244827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 4e-60; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 53466961 - 53466804
Alignment:
Q  27 taacagttaaagtaacaattagcaattttattttaatcaaaatcgtttttcatgaaatcagatcaaaaagctcaaataacagtcatcaattagcttagc- 125  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||     
T  53466961 taacaattacagtaacaattaacaattttattttaatcaaaatagtttatcatgaaattagaccaaaaagctcaaataacagtcatcaattagcttagct 53466862  T
Q  126 tttatgttgatttggagctgacagatatcgattgagatagccatagccattgggacat 183  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53466861 tttatgttgatttggagctaacagatatcgattgagatagccatagccattgggacat 53466804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 37916240 - 37916344
Alignment:
Q  217 ttgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttg 316  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  37916240 ttgccatttaaagtgcaccttttagtgtgagccattcattttaatccaagggtcattatttgtctctctcatcctctcattataacactcctttcatttg 37916339  T
Q  317 ataca 321  Q
    |||||    
T  37916340 ataca 37916344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 53466660 - 53466559
Alignment:
Q  218 tgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttga 317  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| | | ||||||    
T  53466660 tgccatttaaagtgtgccttttaatgtgcgccattcattttaatctaatggtcattatttgttcctctcatcttctcattataacactcctcttatttga 53466561  T
Q  318 ta 319  Q
    ||    
T  53466560 ta 53466559  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 4775403 - 4775333
Alignment:
Q  253 cattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttgatacaccc 324  Q
    ||||||||||||| ||||  ||||| ||||||||| |||||||| ||||||||| | |||||||||||||||    
T  4775403 cattttaatccaatggtccatatttattcctctca-cctctcataataacactcctctcatttgatacaccc 4775333  T

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Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 217 - 323
Target Start/End: Original strand, 19119618 - 19119724
Alignment:
Q  217 ttgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttg 316  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  19119618 ttgccatttaaagtgcaccttttaatgtgagccattcattttaatctaagggtcattatttattcctctcatcctctcattataacactcctctcatttg 19119717  T
Q  317 atacacc 323  Q
    |||||||    
T  19119718 atacacc 19119724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 42942618 - 42942724
Alignment:
Q  218 tgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattat-aacactcatttcatttg 316  Q
    ||||||||||||||    ||||||||||||||||||||||||||| |||||| | |||||||||||||||| || ||||| | ||||||| | |||||||    
T  42942618 tgccatttaaagtgcagtttttaatgtgagccattcattttaatctaagggttaatatttgttcctctcat-ctgtcattttaaacactcctctcatttg 42942716  T
Q  317 atacaccc 324  Q
    ||||||||    
T  42942717 atacaccc 42942724  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 6437367 - 6437431
Alignment:
Q  260 atccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttgatacaccc 324  Q
    |||||| |||||  ||||| || ||||| |||||||||||||||||| | |||||||||||||||    
T  6437367 atccaatggtcaccatttgatcatctcaccctctcattataacactcctctcatttgatacaccc 6437431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 17277760 - 17277804
Alignment:
Q  280 tcctctcatcctctcattataacactcatttcatttgatacaccc 324  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||    
T  17277760 tcctctcattctctcattataacactcctctcatttgatacaccc 17277804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 6052576 - 6052647
Alignment:
Q  251 ttcattttaatccaagggtcattatttgttcctctcatcctctcattataacac-tcatttcatttgataca 321  Q
    |||||||| ||||||||||||| || | |||||||||  ||||||||||||||| || | ||||||||||||    
T  6052576 ttcattttcatccaagggtcataatctattcctctcactctctcattataacacttcctctcatttgataca 6052647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 43600585 - 43600646
Alignment:
Q  222 atttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcct 283  Q
    ||||||||||   |||||||||||| || ||||||||||||  ||||| |||||||||||||    
T  43600585 atttaaagtgcagcttttaatgtgaaccgttcattttaatctgagggtaattatttgttcct 43600646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 43606077 - 43606138
Alignment:
Q  222 atttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcct 283  Q
    ||||||||||   |||||||||||| || ||||||||||||  ||||| |||||||||||||    
T  43606077 atttaaagtgcagcttttaatgtgaaccgttcattttaatctgagggtaattatttgttcct 43606138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 43611569 - 43611630
Alignment:
Q  222 atttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcct 283  Q
    ||||||||||   |||||||||||| || ||||||||||||  ||||| |||||||||||||    
T  43611569 atttaaagtgcagcttttaatgtgaaccgttcattttaatctgagggtaattatttgttcct 43611630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 9146921 - 9147027
Alignment:
Q  217 ttgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttg 316  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  9146921 ttgccatttaaagtgcaccttttaatgtgagccattcattttaatctaagggtcattatttg-tcctctcatcctctcattataacactcctctcatttg 9147019  T
Q  317 atacaccc 324  Q
    ||||||||    
T  9147020 atacaccc 9147027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 32949783 - 32949890
Alignment:
Q  217 ttgccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttg 316  Q
    |||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  32949783 ttgccatttaaagtgcaccttttaatgtgagccattcattttaatttaagggtcattatttattcctctcatcctctcattataacactcctctcatttg 32949882  T
Q  317 atacaccc 324  Q
    ||||||||    
T  32949883 atacaccc 32949890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 7831684 - 7831655
Alignment:
Q  273 tatttgttcctctcatcctctcattataac 302  Q
    ||||||||||||||||||||||||||||||    
T  7831684 tatttgttcctctcatcctctcattataac 7831655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 31076981 - 31076936
Alignment:
Q  256 tttaatccaagggtcattatttgttcctctcatcctctcattataa 301  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||    
T  31076981 tttaatctaagggtcattattttatcctctcaccctctcattataa 31076936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 26541555 - 26541658
Alignment:
Q  221 catttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttgatac 320  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||| | |||||||||||    
T  26541555 catttaaagtgcaccttttaatgtgagccattcattttaatctaagagtcattatttatttctctcatcctctcattataacactcttctcatttgatac 26541654  T
Q  321 accc 324  Q
    ||||    
T  26541655 accc 26541658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 2946637 - 2946740
Alignment:
Q  220 ccatttaaagtgtgccttttaatgtgagccattcattttaatccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttgata 319  Q
    ||||||||||||  ||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||| | ||||||| |||||| | ||||||||||    
T  2946637 ccatttaaagtgcaccttttagtgtgagccattcattttaatacaagagtcattattttttcctctcatcatgtcattatgacactcctctcatttgata 2946736  T
Q  320 cacc 323  Q
    ||||    
T  2946737 cacc 2946740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 24063939 - 24063868
Alignment:
Q  251 ttcattttaatccaagggtcattatttgttcctctcatcctctcattataacac-tcatttcatttgataca 321  Q
    |||||||| ||||||||||||| || | ||||||||| |||||||||||||||| || | ||||||||||||    
T  24063939 ttcattttcatccaagggtcataatatattcctctcaccctctcattataacacttcctctcatttgataca 24063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 3929174 - 3929237
Alignment:
Q  260 atccaagggtcattatttgttcctctcatcctctcattataacactcatttcatttgatacacc 323  Q
    |||||| |||||  ||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  3929174 atccaatggtcaccatttgatcctctcatcctctcattataacactcctctcatttgatacacc 3929237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 36930173 - 36930202
Alignment:
Q  273 tatttgttcctctcatcctctcattataac 302  Q
    ||||||||||||||||||||||||||||||    
T  36930173 tatttgttcctctcatcctctcattataac 36930202  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 43250926 - 43250898
Alignment:
Q  273 tatttgttcctctcatcctctcattataa 301  Q
    |||||||||||||||||||||||||||||    
T  43250926 tatttgttcctctcatcctctcattataa 43250898  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 5979693 - 5979636
Alignment:
Q  121 ttagctttatgttgatttggagctgacagatatcgattgagatagccatagccattgg 178  Q
    |||||||||||||||||||||| | | ||| ||||||||||||||||| || ||||||    
T  5979693 ttagctttatgttgatttggagttaaaagacatcgattgagatagccaaagacattgg 5979636  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 5981959 - 5982031
Alignment:
Q  218 tgccatttaaagtgtgccttttaatgtgagcc-attcattttaatccaagggtcattatttgttcctctcatc 289  Q
    ||||||||||| ||   ||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  5981959 tgccatttaaaatgcagcttttaatgcgagccgattcattttaaaccaagggtaattatttggtcctctcatc 5982031  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 6374190 - 6374145
Alignment:
Q  71 gtttttcatgaaatcagatcaaaaagctcaaataacagtcatcaat 116  Q
    |||||||||||||| ||| | |||||||| ||||||||||||||||    
T  6374190 gtttttcatgaaattagacccaaaagctctaataacagtcatcaat 6374145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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