View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8984_low_22 (Length: 456)
Name: NF8984_low_22
Description: NF8984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8984_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 20 - 439
Target Start/End: Complemental strand, 37202333 - 37201911
Alignment:
| Q |
20 |
atacgctccaacctctaatagtttgcacaacaatgattgttcttatgatatcccatcttgtcacttatgcaaacacctcgttaaaagtatttgggagtat |
119 |
Q |
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| T |
37202333 |
atacgctccaacctctaatagtttgcacaacaatggttgttcttatgatattccatcttgtcactaatgcaaacacctcgttaaacgtatttgggagtat |
37202234 |
T |
|
| Q |
120 |
tgttttgccagtagccgtgccttgtacttttcaacatctcctttctcattatatttggtattaaatacccatttaaatccatttttt-agctccaccgga |
218 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37202233 |
tgttttgccactagccgtgccttgtacttttcaacatctcctttctcattatatttggtattaaatacccatttaaatccatttttttagctccaccgga |
37202134 |
T |
|
| Q |
219 |
aagtgtagtcatgccaagtttcatttctctctataa--ctttcaactcaacatccatggctctcctccaattgagattcttcaccgcatattcaaagtgc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
37202133 |
aagtgtagtcatgccaagtttcatttctctctataaagctttcatctcaacatccatggctctcctccaattgagattcttcactgcatattcaaagtgc |
37202034 |
T |
|
| Q |
317 |
acatgatcttcaaattgagtaaaagtgactaaggtaggtgtgttattcttcatttgttgtttcaatgtctcttaacatattcttctagccaacctggctt |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37202033 |
acatgatcttcaaattgagtaaaagtgactaaggtaggtgtgttattcttcatttgttgtttcaatgtctcttaacatattcttctagccaacctggctt |
37201934 |
T |
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| Q |
417 |
ttacttgagtctcacactgatgt |
439 |
Q |
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||||||||||||||||||||||| |
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| T |
37201933 |
ttacttgagtctcacactgatgt |
37201911 |
T |
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