View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8984_low_56 (Length: 274)
Name: NF8984_low_56
Description: NF8984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8984_low_56 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 31213483 - 31213221
Alignment:
| Q |
14 |
ttggagttacgttgtgtacttat-tataaaagaaaataaagaaggagcattatttaatgactcaagtacacttttgaaagtcttgcacaaaggcaatgca |
112 |
Q |
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| T |
31213483 |
ttggagttacgttatgtgcttttatataaaagaaaataaagaaggagcattatttaatgactcaagtacacttttgaaagtcttgcacaaaggcaataca |
31213384 |
T |
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| Q |
113 |
aatttatcaacttagatttcc-----taaccatactttttccgaagtgtgcattattttggcctccact-----------cctcatatttcacgattcat |
196 |
Q |
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||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
31213383 |
aatttatcaacttagctttcctaacgtaaccatactttttccaaagtgtgcattattttggcctccacttattagctaagcctcatatttcacgattcat |
31213284 |
T |
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| Q |
197 |
tattttcttttgaataaaatttcattatcttggaattatttttactttcctaatcacactttt |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
31213283 |
tattttcttttgaataaaatttcattatcttggaattatttttactttcctaatctcactttt |
31213221 |
T |
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