View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8985_low_14 (Length: 705)

Name: NF8985_low_14
Description: NF8985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8985_low_14
NF8985_low_14
[»] chr1 (72 HSPs)
chr1 (260-692)||(3924474-3924909)
chr1 (19-174)||(3924993-3925148)
chr1 (431-643)||(10199368-10199579)
chr1 (517-645)||(33527192-33527320)
chr1 (456-597)||(15437908-15438049)
chr1 (469-614)||(35017502-35017649)
chr1 (444-601)||(4699587-4699741)
chr1 (455-589)||(25479534-25479668)
chr1 (453-595)||(37842336-37842478)
chr1 (462-591)||(29007706-29007835)
chr1 (448-540)||(31118045-31118137)
chr1 (461-577)||(45205033-45205149)
chr1 (490-557)||(49888752-49888819)
chr1 (457-595)||(6932946-6933084)
chr1 (445-503)||(29635386-29635444)
chr1 (460-601)||(10854674-10854815)
chr1 (482-587)||(34179882-34179987)
chr1 (453-509)||(4549263-4549319)
chr1 (445-509)||(4576838-4576902)
chr1 (461-612)||(4700055-4700206)
chr1 (488-595)||(7472259-7472365)
chr1 (453-528)||(35925704-35925779)
chr1 (453-595)||(38578474-38578617)
chr1 (482-576)||(6279365-6279459)
chr1 (533-591)||(15360845-15360903)
chr1 (469-592)||(28689449-28689574)
chr1 (470-592)||(14629964-14630088)
chr1 (482-555)||(23902077-23902150)
chr1 (453-594)||(31517721-31517862)
chr1 (455-592)||(43029385-43029521)
chr1 (462-538)||(3223672-3223747)
chr1 (511-595)||(6074421-6074505)
chr1 (469-577)||(12477284-12477392)
chr1 (482-562)||(12564884-12564964)
chr1 (455-591)||(17269201-17269337)
chr1 (481-533)||(33722410-33722462)
chr1 (463-595)||(36151496-36151628)
chr1 (457-509)||(37416838-37416890)
chr1 (488-575)||(4215339-4215426)
chr1 (482-577)||(5592695-5592790)
chr1 (472-535)||(28077069-28077132)
chr1 (456-595)||(33185942-33186080)
chr1 (571-645)||(172676-172750)
chr1 (491-585)||(4363651-4363745)
chr1 (455-577)||(6262704-6262825)
chr1 (482-528)||(11893603-11893649)
chr1 (519-589)||(25006081-25006151)
chr1 (469-535)||(27140485-27140551)
chr1 (482-595)||(30259496-30259610)
chr1 (603-645)||(35058903-35058945)
chr1 (530-630)||(42757223-42757324)
chr1 (496-562)||(44422679-44422745)
chr1 (521-591)||(49517021-49517091)
chr1 (431-604)||(3224361-3224533)
chr1 (455-528)||(14128458-14128530)
chr1 (450-595)||(33723360-33723505)
chr1 (469-550)||(34290228-34290309)
chr1 (568-645)||(34619474-34619551)
chr1 (482-543)||(39347977-39348038)
chr1 (482-531)||(43954055-43954104)
chr1 (477-538)||(44251540-44251601)
chr1 (453-562)||(45394095-45394204)
chr1 (482-535)||(51929785-51929838)
chr1 (469-513)||(4201935-4201979)
chr1 (482-554)||(6659502-6659574)
chr1 (483-591)||(11129196-11129304)
chr1 (487-592)||(15361661-15361768)
chr1 (485-557)||(35590905-35590977)
chr1 (431-503)||(37941945-37942016)
chr1 (445-501)||(42336656-42336712)
chr1 (482-538)||(47598431-47598487)
chr1 (481-591)||(49557092-49557208)
[»] chr3 (52 HSPs)
chr3 (455-595)||(40122736-40122875)
chr3 (469-601)||(24785146-24785278)
chr3 (460-601)||(36101509-36101650)
chr3 (482-595)||(38462228-38462341)
chr3 (488-595)||(24887299-24887406)
chr3 (496-606)||(47904087-47904197)
chr3 (445-574)||(19679301-19679430)
chr3 (460-601)||(36139819-36139960)
chr3 (482-595)||(36646392-36646505)
chr3 (484-589)||(2318596-2318703)
chr3 (469-592)||(45432936-45433059)
chr3 (482-535)||(12985355-12985408)
chr3 (445-574)||(14548694-14548823)
chr3 (457-577)||(1816548-1816668)
chr3 (479-595)||(27792819-27792935)
chr3 (520-596)||(36783382-36783458)
chr3 (482-557)||(22214669-22214744)
chr3 (540-595)||(49586984-49587039)
chr3 (455-581)||(21574452-21574577)
chr3 (482-595)||(21862185-21862299)
chr3 (542-592)||(34954033-34954083)
chr3 (453-557)||(21367652-21367757)
chr3 (496-577)||(23315591-23315672)
chr3 (455-591)||(27290884-27291018)
chr3 (520-585)||(37788817-37788882)
chr3 (522-595)||(43116478-43116551)
chr3 (450-595)||(52618950-52619095)
chr3 (453-489)||(5457073-5457109)
chr3 (462-530)||(36200108-36200176)
chr3 (453-509)||(47249467-47249523)
chr3 (568-615)||(139912-139959)
chr3 (498-561)||(30322046-30322109)
chr3 (552-611)||(34958259-34958318)
chr3 (456-527)||(42745053-42745124)
chr3 (487-561)||(20502083-20502157)
chr3 (482-536)||(31403153-31403207)
chr3 (445-551)||(34382933-34383039)
chr3 (445-503)||(41724251-41724309)
chr3 (462-591)||(3044249-3044378)
chr3 (482-535)||(13709833-13709886)
chr3 (482-591)||(23785206-23785315)
chr3 (456-576)||(25453842-25453963)
chr3 (480-533)||(26478954-26479007)
chr3 (462-539)||(26542540-26542617)
chr3 (522-595)||(42084301-42084374)
chr3 (456-549)||(43115049-43115142)
chr3 (569-630)||(44014192-44014253)
chr3 (445-529)||(23808037-23808121)
chr3 (453-549)||(30573895-30573991)
chr3 (519-595)||(30956673-30956749)
chr3 (519-595)||(30972485-30972561)
chr3 (455-535)||(37273141-37273221)
[»] chr7 (53 HSPs)
chr7 (455-645)||(12110257-12110447)
chr7 (490-595)||(3610758-3610863)
chr7 (455-595)||(33894570-33894714)
chr7 (506-639)||(44917570-44917703)
chr7 (445-557)||(25670559-25670671)
chr7 (499-601)||(46945850-46945952)
chr7 (453-626)||(30535479-30535652)
chr7 (568-645)||(41668206-41668283)
chr7 (568-645)||(41668884-41668961)
chr7 (521-592)||(2727409-2727480)
chr7 (445-595)||(5006484-5006632)
chr7 (456-535)||(9423578-9423657)
chr7 (444-584)||(44151448-44151592)
chr7 (572-645)||(6824816-6824888)
chr7 (462-577)||(12234879-12234992)
chr7 (482-538)||(24363611-24363667)
chr7 (477-589)||(28165044-28165156)
chr7 (522-593)||(9527140-9527211)
chr7 (498-585)||(17989049-17989136)
chr7 (488-595)||(27481310-27481417)
chr7 (476-591)||(38010665-38010780)
chr7 (491-592)||(2999141-2999243)
chr7 (517-595)||(39169460-39169538)
chr7 (485-595)||(44910551-44910661)
chr7 (476-549)||(2825235-2825308)
chr7 (498-595)||(22759133-22759230)
chr7 (530-595)||(45813238-45813303)
chr7 (450-494)||(1645678-1645722)
chr7 (469-533)||(26935554-26935618)
chr7 (488-528)||(40428569-40428609)
chr7 (455-595)||(46081980-46082123)
chr7 (496-592)||(46086397-46086493)
chr7 (525-592)||(30496654-30496721)
chr7 (476-543)||(40530413-40530480)
chr7 (530-585)||(45777229-45777284)
chr7 (469-535)||(4966163-4966229)
chr7 (490-595)||(28440466-28440571)
chr7 (488-582)||(29363478-29363572)
chr7 (545-595)||(35536054-35536104)
chr7 (487-645)||(45530418-45530576)
chr7 (462-535)||(7244687-7244760)
chr7 (459-546)||(20888381-20888465)
chr7 (498-579)||(36370633-36370713)
chr7 (456-549)||(46104551-46104644)
chr7 (482-578)||(3468578-3468674)
chr7 (455-543)||(20553102-20553190)
chr7 (487-591)||(28128410-28128513)
chr7 (498-594)||(30456476-30456572)
chr7 (445-493)||(33294555-33294603)
chr7 (455-535)||(33645944-33646023)
chr7 (482-601)||(36484045-36484165)
chr7 (445-493)||(36537957-36538005)
chr7 (490-538)||(39505960-39506008)
[»] chr2 (82 HSPs)
chr2 (456-641)||(41817069-41817254)
chr2 (506-594)||(41407023-41407111)
chr2 (431-595)||(787278-787442)
chr2 (445-601)||(39621894-39622048)
chr2 (453-562)||(40158698-40158807)
chr2 (445-577)||(35485882-35486014)
chr2 (445-593)||(26857083-26857231)
chr2 (518-601)||(4090290-4090373)
chr2 (482-595)||(43259781-43259894)
chr2 (503-591)||(10143123-10143211)
chr2 (497-593)||(34054926-34055022)
chr2 (476-571)||(42419968-42420063)
chr2 (482-577)||(43141836-43141931)
chr2 (481-595)||(656786-656900)
chr2 (482-579)||(7103492-7103590)
chr2 (517-595)||(17952746-17952824)
chr2 (464-594)||(33942099-33942228)
chr2 (499-645)||(35486390-35486536)
chr2 (521-594)||(43299451-43299525)
chr2 (453-514)||(28677640-28677701)
chr2 (486-595)||(32694159-32694268)
chr2 (455-588)||(33256694-33256827)
chr2 (498-566)||(4085226-4085293)
chr2 (455-595)||(28933771-28933910)
chr2 (456-595)||(5133719-5133858)
chr2 (455-538)||(16785331-16785414)
chr2 (476-591)||(22681189-22681304)
chr2 (524-595)||(23143030-23143101)
chr2 (524-595)||(23554820-23554891)
chr2 (456-591)||(42817360-42817495)
chr2 (443-510)||(45314900-45314967)
chr2 (487-589)||(6988068-6988170)
chr2 (485-591)||(13630294-13630400)
chr2 (469-595)||(29316772-29316898)
chr2 (453-611)||(43530092-43530250)
chr2 (456-557)||(680488-680589)
chr2 (455-592)||(1742015-1742152)
chr2 (490-539)||(1810667-1810716)
chr2 (456-645)||(28039316-28039505)
chr2 (462-535)||(32821816-32821889)
chr2 (505-582)||(37292380-37292457)
chr2 (453-529)||(1647249-1647325)
chr2 (471-535)||(10198479-10198543)
chr2 (532-596)||(31740019-31740083)
chr2 (545-597)||(33192138-33192190)
chr2 (488-562)||(3059290-3059365)
chr2 (516-637)||(6887306-6887426)
chr2 (455-590)||(10285813-10285947)
chr2 (517-592)||(13866839-13866914)
chr2 (528-595)||(25609743-25609810)
chr2 (479-589)||(27288586-27288694)
chr2 (540-591)||(40808268-40808319)
chr2 (455-538)||(43065433-43065516)
chr2 (520-591)||(44439408-44439479)
chr2 (519-577)||(5043607-5043665)
chr2 (455-528)||(11488291-11488362)
chr2 (476-514)||(41032959-41032997)
chr2 (462-532)||(41809235-41809305)
chr2 (504-601)||(626243-626340)
chr2 (487-532)||(1741529-1741574)
chr2 (488-529)||(3973548-3973589)
chr2 (453-554)||(35378513-35378614)
chr2 (519-592)||(37053544-37053617)
chr2 (530-595)||(42907306-42907371)
chr2 (490-555)||(43985021-43985086)
chr2 (468-533)||(44443330-44443395)
chr2 (455-535)||(3067362-3067442)
chr2 (482-594)||(3235394-3235504)
chr2 (539-595)||(14209224-14209280)
chr2 (498-594)||(18962064-18962160)
chr2 (497-593)||(29300594-29300690)
chr2 (477-557)||(29628748-29628828)
chr2 (462-514)||(31228827-31228879)
chr2 (551-595)||(32098387-32098431)
chr2 (520-600)||(33931618-33931698)
chr2 (453-557)||(33941894-33941998)
chr2 (517-576)||(34101983-34102043)
chr2 (455-535)||(35378999-35379079)
chr2 (559-595)||(38239638-38239674)
chr2 (473-509)||(43569773-43569809)
chr2 (459-595)||(44438826-44438962)
chr2 (453-509)||(44606091-44606147)
[»] chr5 (48 HSPs)
chr5 (448-595)||(17368623-17368770)
chr5 (445-597)||(37588333-37588485)
chr5 (462-577)||(10272421-10272536)
chr5 (455-594)||(14295454-14295593)
chr5 (456-595)||(16889682-16889821)
chr5 (445-597)||(37526172-37526324)
chr5 (471-549)||(2880546-2880624)
chr5 (455-597)||(37794681-37794822)
chr5 (483-592)||(28586777-28586886)
chr5 (447-645)||(10125693-10125892)
chr5 (453-595)||(7674595-7674737)
chr5 (457-595)||(12459986-12460123)
chr5 (453-630)||(9106737-9106911)
chr5 (462-591)||(18704026-18704154)
chr5 (445-597)||(37690609-37690762)
chr5 (455-554)||(10907367-10907465)
chr5 (453-584)||(15003495-15003626)
chr5 (453-538)||(2468435-2468521)
chr5 (456-549)||(10391334-10391428)
chr5 (453-514)||(499712-499773)
chr5 (469-594)||(4855646-4855771)
chr5 (444-535)||(11707062-11707153)
chr5 (540-591)||(29116998-29117049)
chr5 (445-536)||(37611188-37611279)
chr5 (445-536)||(37787918-37788009)
chr5 (453-555)||(2568645-2568747)
chr5 (522-617)||(14599353-14599450)
chr5 (453-543)||(17827523-17827613)
chr5 (490-595)||(29588827-29588931)
chr5 (455-592)||(32172603-32172740)
chr5 (498-595)||(36539693-36539790)
chr5 (540-601)||(42569048-42569109)
chr5 (481-589)||(12595749-12595857)
chr5 (480-528)||(38104865-38104913)
chr5 (519-601)||(912695-912778)
chr5 (456-535)||(36638754-36638833)
chr5 (496-595)||(38831481-38831579)
chr5 (497-555)||(5946704-5946762)
chr5 (483-533)||(32408603-32408653)
chr5 (482-535)||(3237100-3237153)
chr5 (485-597)||(18543210-18543322)
chr5 (469-514)||(28413281-28413326)
chr5 (482-547)||(30217077-30217142)
chr5 (497-594)||(36542307-36542404)
chr5 (469-529)||(12521541-12521601)
chr5 (551-595)||(28578839-28578883)
chr5 (535-591)||(35135725-35135781)
chr5 (491-535)||(36774726-36774770)
[»] chr4 (54 HSPs)
chr4 (451-595)||(20936208-20936352)
chr4 (482-591)||(49219090-49219199)
chr4 (461-645)||(6466035-6466219)
chr4 (445-577)||(7693984-7694115)
chr4 (476-592)||(24929443-24929559)
chr4 (469-543)||(6978959-6979033)
chr4 (453-601)||(1137653-1137801)
chr4 (476-595)||(17884015-17884134)
chr4 (445-595)||(24370924-24371077)
chr4 (470-588)||(30207569-30207686)
chr4 (450-592)||(54325015-54325157)
chr4 (444-577)||(35064820-35064950)
chr4 (520-628)||(53422276-53422380)
chr4 (469-591)||(29263321-29263443)
chr4 (445-592)||(4071832-4071975)
chr4 (445-601)||(2996514-2996670)
chr4 (497-577)||(6987766-6987846)
chr4 (453-589)||(22666707-22666843)
chr4 (497-577)||(30581702-30581782)
chr4 (488-592)||(45128326-45128430)
chr4 (455-550)||(1965933-1966028)
chr4 (457-508)||(8469362-8469413)
chr4 (540-595)||(21952522-21952577)
chr4 (445-595)||(50742809-50742957)
chr4 (469-535)||(55547041-55547107)
chr4 (482-555)||(8468935-8469008)
chr4 (451-556)||(30631943-30632047)
chr4 (453-562)||(42866048-42866157)
chr4 (506-601)||(3891518-3891611)
chr4 (488-562)||(18019951-18020026)
chr4 (460-591)||(23819041-23819171)
chr4 (482-592)||(30338601-30338712)
chr4 (469-528)||(35743296-35743355)
chr4 (552-595)||(52645829-52645872)
chr4 (496-595)||(52735069-52735168)
chr4 (455-509)||(3176087-3176141)
chr4 (521-579)||(13949893-13949951)
chr4 (496-562)||(21157748-21157814)
chr4 (469-523)||(29467621-29467675)
chr4 (445-515)||(37575909-37575979)
chr4 (453-591)||(47118946-47119084)
chr4 (525-595)||(50745947-50746017)
chr4 (444-509)||(4691881-4691946)
chr4 (445-514)||(27123325-27123394)
chr4 (556-601)||(38478683-38478728)
chr4 (454-535)||(46110210-46110291)
chr4 (455-560)||(53943588-53943693)
chr4 (521-590)||(55870390-55870459)
chr4 (482-526)||(5131260-5131304)
chr4 (455-535)||(18011878-18011958)
chr4 (444-504)||(19395043-19395103)
chr4 (536-592)||(20936066-20936122)
chr4 (496-600)||(45104431-45104535)
chr4 (551-595)||(47970265-47970309)
[»] chr6 (49 HSPs)
chr6 (469-595)||(281845-281971)
chr6 (445-605)||(33887767-33887927)
chr6 (462-593)||(2117352-2117483)
chr6 (459-643)||(33080565-33080753)
chr6 (445-528)||(30523951-30524034)
chr6 (459-591)||(4006665-4006797)
chr6 (455-543)||(20377903-20377991)
chr6 (453-594)||(31776254-31776396)
chr6 (445-595)||(2735016-2735167)
chr6 (460-555)||(34403842-34403937)
chr6 (455-536)||(7931709-7931790)
chr6 (522-595)||(31624205-31624278)
chr6 (455-536)||(32665665-32665746)
chr6 (514-595)||(33826777-33826858)
chr6 (519-595)||(1402943-1403019)
chr6 (462-554)||(2112188-2112280)
chr6 (462-577)||(4420610-4420723)
chr6 (456-556)||(7945868-7945967)
chr6 (456-595)||(2027390-2027529)
chr6 (488-595)||(9093572-9093679)
chr6 (453-508)||(33832254-33832309)
chr6 (445-528)||(34939527-34939610)
chr6 (483-537)||(7931800-7931854)
chr6 (476-617)||(17241256-17241395)
chr6 (487-591)||(24836217-24836318)
chr6 (445-535)||(31686336-31686426)
chr6 (520-601)||(415245-415326)
chr6 (457-534)||(27909623-27909700)
chr6 (455-595)||(33500463-33500604)
chr6 (444-503)||(2455298-2455358)
chr6 (511-571)||(10272865-10272925)
chr6 (483-595)||(20671877-20671988)
chr6 (445-529)||(32577959-32578043)
chr6 (464-595)||(3155123-3155253)
chr6 (462-577)||(3181059-3181173)
chr6 (488-595)||(27893994-27894100)
chr6 (469-528)||(34939758-34939817)
chr6 (469-515)||(6536974-6537020)
chr6 (545-595)||(24782006-24782056)
chr6 (445-531)||(30604907-30604993)
chr6 (455-509)||(33498652-33498706)
chr6 (445-514)||(2460124-2460193)
chr6 (520-577)||(3785748-3785805)
chr6 (469-514)||(7785741-7785786)
chr6 (552-593)||(34633206-34633247)
chr6 (490-562)||(725673-725745)
chr6 (531-595)||(10452419-10452483)
chr6 (455-515)||(30863273-30863333)
chr6 (444-508)||(33089540-33089604)
[»] chr8 (73 HSPs)
chr8 (489-595)||(29973028-29973134)
chr8 (522-633)||(926396-926508)
chr8 (500-645)||(34522082-34522229)
chr8 (496-593)||(27728045-27728142)
chr8 (482-595)||(28769349-28769462)
chr8 (453-585)||(38537548-38537680)
chr8 (453-592)||(42215287-42215426)
chr8 (445-535)||(8060676-8060766)
chr8 (482-535)||(30277255-30277308)
chr8 (455-595)||(4558745-4558885)
chr8 (455-595)||(11183492-11183632)
chr8 (459-571)||(24258042-24258149)
chr8 (455-575)||(30191124-30191244)
chr8 (453-532)||(3254235-3254314)
chr8 (445-536)||(12851182-12851273)
chr8 (445-592)||(37822632-37822778)
chr8 (453-575)||(10383852-10383974)
chr8 (455-533)||(14949875-14949953)
chr8 (503-597)||(34770837-34770931)
chr8 (453-533)||(11188136-11188216)
chr8 (453-557)||(43504736-43504840)
chr8 (455-522)||(6950342-6950409)
chr8 (456-562)||(4390193-4390299)
chr8 (444-546)||(8255388-8255490)
chr8 (478-560)||(11745658-11745740)
chr8 (453-627)||(13459561-13459734)
chr8 (469-535)||(20672757-20672823)
chr8 (517-595)||(34080311-34080389)
chr8 (490-535)||(29169115-29169160)
chr8 (482-595)||(39866744-39866860)
chr8 (483-595)||(1470867-1470979)
chr8 (530-590)||(3269646-3269706)
chr8 (482-550)||(8062321-8062389)
chr8 (482-554)||(31705073-31705145)
chr8 (477-589)||(33714241-33714352)
chr8 (453-528)||(2458547-2458622)
chr8 (476-555)||(2492923-2493002)
chr8 (544-595)||(26215443-26215494)
chr8 (548-595)||(27465320-27465367)
chr8 (444-543)||(27754403-27754502)
chr8 (520-595)||(33209268-33209343)
chr8 (488-595)||(39561557-39561664)
chr8 (456-583)||(41620275-41620402)
chr8 (462-562)||(43704366-43704468)
chr8 (457-503)||(7424688-7424734)
chr8 (517-591)||(8799356-8799430)
chr8 (492-590)||(10437837-10437934)
chr8 (481-595)||(13652162-13652276)
chr8 (481-595)||(13710805-13710919)
chr8 (453-626)||(34849020-34849193)
chr8 (460-522)||(41606891-41606953)
chr8 (497-555)||(44865589-44865647)
chr8 (489-595)||(3537046-3537154)
chr8 (462-587)||(7714197-7714322)
chr8 (445-494)||(8629504-8629553)
chr8 (453-574)||(11813086-11813207)
chr8 (569-630)||(16163375-16163436)
chr8 (469-514)||(25869263-25869308)
chr8 (490-595)||(30013166-30013270)
chr8 (444-509)||(30259147-30259212)
chr8 (445-514)||(30918141-30918209)
chr8 (480-549)||(37776712-37776781)
chr8 (477-590)||(41336650-41336763)
chr8 (476-573)||(42215086-42215182)
chr8 (455-528)||(43368683-43368756)
chr8 (503-591)||(4763869-4763957)
chr8 (545-593)||(10079136-10079184)
chr8 (453-505)||(27119910-27119962)
chr8 (471-535)||(30389106-30389170)
chr8 (499-595)||(30627929-30628025)
chr8 (453-508)||(32840966-32841022)
chr8 (488-528)||(42370377-42370417)
chr8 (523-595)||(42597348-42597420)
[»] scaffold0020 (1 HSPs)
scaffold0020 (453-592)||(159954-160092)
[»] scaffold0024 (1 HSPs)
scaffold0024 (481-591)||(27527-27637)
[»] scaffold0053 (1 HSPs)
scaffold0053 (524-592)||(20129-20197)
[»] scaffold0022 (1 HSPs)
scaffold0022 (519-594)||(143109-143183)
[»] scaffold0311 (1 HSPs)
scaffold0311 (445-511)||(10590-10656)
[»] scaffold0136 (1 HSPs)
scaffold0136 (471-533)||(32756-32818)
[»] scaffold0110 (1 HSPs)
scaffold0110 (456-592)||(4207-4344)
[»] scaffold0003 (1 HSPs)
scaffold0003 (482-538)||(306330-306386)


Alignment Details
Target: chr1 (Bit Score: 402; Significance: 0; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 260 - 692
Target Start/End: Complemental strand, 3924909 - 3924474
Alignment:
Q  260 aatgaaatttgc---atttattttccttgctggtcatatttttgtgtttctttatactgtttattataaaagcaaatcctatatttataacatgatttct 356  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3924909 aatgaaatttgctagatttattttccttgctggtcatatttttgtgtttctttatactgtttattataaaagcaaatcctatatttataacatgatttct 3924810  T
Q  357 tctcatttctaaatgtctatagtagcaagtgtatgtctcgattaacttatttgaatttatctcgtgacattgatacttgtaacactgatttgagaaaact 456  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3924809 tctcatttctaaatgtctatagtagcaagcatatgtctcgattgacttatttgaatttatctcgtgacatagatacttgtaacactgatttgagaaaact 3924710  T
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaac 556  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3924709 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaac 3924610  T
Q  557 agtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaacccagcactggt 656  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3924609 agtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaacccagcactggt 3924510  T
Q  657 gttacatgtattccttgccatcttaaagtctctctg 692  Q
    ||||||||||||||||||||||||||||||||||||    
T  3924509 gttacatgtattccttgccatcttaaagtctctctg 3924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 3925148 - 3924993
Alignment:
Q  19 ctttattcgaaaggatgtcataggatgataataaatttcatactcataattgattcttgactcatgtacaccattcatgtgttcaattttgggatcaaat 118  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3925148 ctttattcaaaaggatttcataggatgataataaatttcatactcataattgattcttgactcatgtacaccattcatgtgttcaattttgggatcaaat 3925049  T
Q  119 acagtatacattataaaattttgactcatgtacttcttaattatggttcatatgac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3925048 acagtatacattataaaattttgactcatgtacttcttaattatggttcatatgac 3924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 431 - 643
Target Start/End: Original strand, 10199368 - 10199579
Alignment:
Q  431 acttgtaacactgatttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataa 530  Q
    |||||| ||||| ||||| || |||| ||||||| |  |||||| ||||| ||||||||||||| |||||||| ||||| |||| ||  ||||||||| |    
T  10199368 acttgtgacact-atttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatga 10199466  T
Q  531 aaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataa 630  Q
    ||| | || || ||||||||||||| |||||| ||| ||||||||||| |||||||||||| ||| |  || ||||||||||||||| | ||||||||||    
T  10199467 aaaaagcttatcgattatacgaaaatagtttgactttattttatcttgggttatagaaataacttatctataagtgtttatgctataagctgcaaaataa 10199566  T
Q  631 actgtttatccaa 643  Q
      |||||| ||||    
T  10199567 gttgtttacccaa 10199579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 517 - 645
Target Start/End: Original strand, 33527192 - 33527320
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctat 616  Q
    |||||| ||||| |||||| || |||||||||| |||||||||||| ||  |||||||||| |||| |||||||||||| ||||| || | ||||||| |    
T  33527192 aggataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataagcgcttatgctct 33527291  T
Q  617 atgttgcaaaataaactgtttatccaaac 645  Q
    | | |||||||||| ||||||||||||||    
T  33527292 aagctgcaaaataagctgtttatccaaac 33527320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 456 - 597
Target Start/End: Complemental strand, 15438049 - 15437908
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||| |||||| |||||| ||||| |||||||  |||| |||||||||| ||||||||  |||||||| ||| |||||||||  | | | ||  |||||    
T  15438049 ttatggaaacaacttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagcctatgaaaacaacttctggctgatttgaaaa 15437950  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    ||||||| ||| ||||||| || |||||||||||||||||||    
T  15437949 cagtttgacttaattttattttttgttatagaaatagctttt 15437908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 614
Target Start/End: Complemental strand, 35017649 - 35017502
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaaca--gtttgcctt 566  Q
    |||||| ||||  ||||||| |||||  ||||||||||||| ||||  |||| ||||||| |||||| |  ||||||||||||||||||  ||||| |||    
T  35017649 ttatgacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactt 35017550  T
Q  567 gattttatcttgtgttatagaaatagctttttcattagtgtttatgct 614  Q
     |||||||||||| ||||| ||||||||| ||||| |||  |||||||    
T  35017549 tattttatcttgtattataaaaatagcttattcataagttcttatgct 35017502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 444 - 601
Target Start/End: Original strand, 4699587 - 4699741
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||||| || |||||||||||||| |||||| ||||| ||||| ||||||  ||||||||| |||| ||||   |||||| |||| |||| |||   | |    
T  4699587 atttgataatacttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaataac---tgg 4699683  T
Q  544 attatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||||||| |||| |||||| ||| |||| |||||||||| |||||||||||| |||||    
T  4699684 attatacaaaaatagtttgactttatttaatcttgtgttgtagaaatagcttattcat 4699741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 455 - 589
Target Start/End: Complemental strand, 25479668 - 25479534
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||| |  |||||| ||||| || |||||||||| |||||||| ||||| |||| ||||||||||||| ||||||||| ||||  |||| |||     
T  25479668 cttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaag 25479569  T
Q  555 acagtttgccttgattttatcttgtgttatagaaa 589  Q
    ||| |||| | | ||||||||||  ||||||||||    
T  25479568 acaatttgacgttattttatctttggttatagaaa 25479534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 453 - 595
Target Start/End: Original strand, 37842336 - 37842478
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  | |||| ||||| |||||  |||||| ||||||||  ||||  |||| | |||||||||| ||||||||| |||| |||| |||    
T  37842336 aacttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcga 37842435  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    | |||||||  ||| |||| ||||| || ||||||||||||||    
T  37842436 acacagtttaactttatttcatcttttgctatagaaatagctt 37842478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 591
Target Start/End: Original strand, 29007706 - 29007835
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| |||| || || |   ||||  || ||||||||| |||| ||||| ||||| |||||    
T  29007706 aaacaatttatgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtagccgatgaaaacaacttatagcttatatgaaaatagttt 29007805  T
Q  562 gccttgattttatcttgtgttatagaaata 591  Q
    | ||| | ||| |||| |||||||||||||    
T  29007806 gactttaatttttcttttgttatagaaata 29007835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 448 - 540
Target Start/End: Complemental strand, 31118137 - 31118045
Alignment:
Q  448 gagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaa 540  Q
    |||| ||||||||||||||  |||||| ||||| || |||||||||| ||||||||||||||  || | ||| |||||||| |||||||||||    
T  31118137 gagacaacttatgaaaacatcttatgacatgttcatcagttgttttcagcttatttccataagttcatcagggtagcttatgaaaacaactaa 31118045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 577
Target Start/End: Complemental strand, 45205149 - 45205033
Alignment:
Q  461 aaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtt 560  Q
    ||||||| |||||| ||||   |||||||||||| |||||||||||| ||||||  | |||||||||| |||||||||  ||| ||||| | ||| ||||    
T  45205149 aaaacaacttatgatatgtccctaagttgttttcagcttatttccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaatagtt 45205050  T
Q  561 tgccttgattttatctt 577  Q
    || ||| ||||||||||    
T  45205049 tgactttattttatctt 45205033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 49888819 - 49888752
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaaca 557  Q
    |||||||||||||| |||||  ||| || |||||||||| |||||||||||||| |||||||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaaca 49888752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 595
Target Start/End: Original strand, 6932946 - 6933084
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaac 556  Q
    |||| ||||| ||||||| ||||| |||||||  |||| | |||||||||||| ||||| |||| | ||||| |||| ||||||||  || || ||||||    
T  6932946 tatggaaacagtttatgatatgttcataagttagtttcagtttatttccataagctcttcaggacaacttatgaaaagaactaataacttctatgaaaac 6933045  T
Q  557 agtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    | |||| ||| ||||||| || ||||||| |||| ||||    
T  6933046 aatttgactttattttatgttttgttataaaaatggctt 6933084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 445 - 503
Target Start/End: Complemental strand, 29635444 - 29635386
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttattt 503  Q
    ||||||| || |||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  29635444 tttgagagaatttatgaaaacaagttatgacatgtttataagttgttttcagcttattt 29635386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 601
Target Start/End: Complemental strand, 10854815 - 10854674
Alignment:
Q  460 gaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagt 559  Q
    |||||||  |||||| ||||| | ||| ||||||| |||||||| | ||| || || |||||||  ||| ||||||||  ||||||||||| ||| ||||    
T  10854815 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaacaacatatagattatacaaaatcagt 10854716  T
Q  560 ttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||| ||| |||||||||||| ||  ||||||| ||| |||||    
T  10854715 ttgactttattttatcttgtatttcagaaataacttattcat 10854674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 34179882 - 34179987
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||||||||||| || |||||||||||||| || ||||||| |||| ||||||  | |||| ||| |  |||||| |||| ||| |||||||||| |||    
T  34179882 ataagttgttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgt 34179981  T
Q  582 tataga 587  Q
    ||||||    
T  34179982 tataga 34179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 509
Target Start/End: Complemental strand, 4549319 - 4549263
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||| || ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  4549319 aacttttggaaacaatttatgacatgtctataagttgttttcagcttatttccataa 4549263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 4576902 - 4576838
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||||| |||||||||||| | ||||||| ||||||||||||||| ||| |||||||| |||||    
T  4576902 tttgagacaacttatgaaaatagtttatgacatgtttataagttgtgttcagcttattttcataa 4576838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 461 - 612
Target Start/End: Original strand, 4700055 - 4700206
Alignment:
Q  461 aaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtt 560  Q
    |||| ||||| ||| |||||||  |||||||||| |||||||| ||||| ||||  ||||||| |||||||||||  | |||| ||||||| |||         
T  4700055 aaaataatttttgacatgtttaggagttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttatacggaaatgaag 4700154  T
Q  561 tgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatg 612  Q
    |  ||| |||||||||| ||||||||||||||||| | ||| |||| |||||    
T  4700155 taactttattttatcttttgttatagaaatagcttgtacataagtgcttatg 4700206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 595
Target Start/End: Complemental strand, 7472365 - 7472259
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    ||||||| |||||||| ||||| ||||  | ||||||||||  ||||| || ||||||||||| |||||| |||  ||| ||| |||||| |||||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaactt-attatatcttttgttataga 7472267  T
Q  588 aatagctt 595  Q
    ||||||||    
T  7472266 aatagctt 7472259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 453 - 528
Target Start/End: Complemental strand, 35925779 - 35925704
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||||||||||  |||||| ||||| ||||| |||||||  ||||||||||||||||||  | ||||||||||    
T  35925779 aacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttat 35925704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 453 - 595
Target Start/End: Complemental strand, 38578617 - 38578474
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttc-cataaactctttaggatagcttataaaaacaactaatagattatacg 551  Q
    ||||||||||||||| |||| | || || ||||||||||||  ||||||||  |||||||||||    |||| ||||  |||||||| |||| ||||||     
T  38578617 aacttatgaaaacaacttataacatattcataagttgttttgagcttatttttcataaactcttctcaatagtttatgtaaacaacttatagcttataca 38578518  T
Q  552 aaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||| | |||  ||| || ||||||| |||||||||||||||||    
T  38578517 aaaataatttaactttatgttatcttttgttatagaaatagctt 38578474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 576
Target Start/End: Complemental strand, 6279459 - 6279365
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatct 576  Q
    ||||||||||||| || ||||||||||| |||| ||||||||||||| |||| |  | | || ||||||||||||| ||||  || |||||||||    
T  6279459 ataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaaagcttatacgaaaacaatttgtttttattttatct 6279365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 15360903 - 15360845
Alignment:
Q  533 acaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    |||||| |||| ||||| |||||||||||| ||| |||||||||| |||||||||||||    
T  15360903 acaacttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 592
Target Start/End: Original strand, 28689449 - 28689574
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttata--aaaacaactaatagattatacgaaaacagtttgcctt 566  Q
    |||||| ||||  ||||||||||||| |||||||| ||||| || |  | |||||||||||  ||||||||| |||| ||||| ||||||   |||| ||    
T  28689449 ttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaaccacttgcatt 28689548  T
Q  567 gattttatcttgtgttatagaaatag 592  Q
     |||||||||| || |||||||||||    
T  28689549 tattttatcttttgatatagaaatag 28689574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 14629964 - 14630088
Alignment:
Q  470 tatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagat--tatacgaaaacagtttgccttg 567  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| |||  | |||||||||| |||| | || |||| |  |||| | ||||||| |  |||     
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagcttatatatgtaaacagtgtaacttt 14630063  T
Q  568 attttatcttgtgttatagaaatag 592  Q
    |||||||||| ||||||||| ||||    
T  14630064 attttatcttttgttatagagatag 14630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 23902077 - 23902150
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||||||||||| ||||| |||||||| |||| || |||||||| | ||||||||| |||| ||||| |||||    
T  23902077 ataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaa 23902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 594
Target Start/End: Original strand, 31517721 - 31517862
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||| ||||||| | |||| ||||| ||||| ||||||| |||||||| ||||| ||||  | || || |||| || ||| || |||| ||||| ||    
T  31517721 aacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatga 31517820  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    || || |||  ||| |||||||||| |||| |||||||||||    
T  31517821 aatcaatttaactttattttatcttttgttgtagaaatagct 31517862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 592
Target Start/End: Original strand, 43029385 - 43029521
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||||| ||||| | |||| |||||| | ||||| |||||||||||||| || |  || ||||||||| |||| | || |||  ||||| | ||    
T  43029385 cttatgaaaacagtttattacatgtctataagctattttcagcttatttccataagctttaaagaatagcttatgaaaatacctcataacttata-ggaa 43029483  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatag 592  Q
    ||||||||  || |||||||||| |||| |||||||||    
T  43029484 acagtttgaatttattttatcttttgttgtagaaatag 43029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 538
Target Start/End: Complemental strand, 3223747 - 3223672
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    |||||| |||||| ||||||||||||||||||| |||||||| ||||| |||  ||||||| ||||  |||||||||    
T  3223747 aaacaacttatgacatgtttataagttgttttcagcttattt-cataagctcgctaggataacttacgaaaacaact 3223672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 6074505 - 6074421
Alignment:
Q  511 ctctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| ||| |||||||  ||||||||| |||| ||||| |||||||||||  ||| || | ||||| |||||||||||||||||    
T  6074505 ctcttcaggctagcttaagaaaacaactcatagcttatatgaaaacagtttaactttatatcatcttttgttatagaaatagctt 6074421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 577
Target Start/End: Original strand, 12477284 - 12477392
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| ||||  ||||||||||||| ||||||||||||| |||||  | |||||||||| |||| | |  |||  ||| | |||||||||||| ||| |    
T  12477284 ttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgacttta 12477383  T
Q  569 ttttatctt 577  Q
    |||||||||    
T  12477384 ttttatctt 12477392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 562
Target Start/End: Original strand, 12564884 - 12564964
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttg 562  Q
    ||||| ||||||| |||||||||| ||| | ||  | |||||||||| ||||||||| |||| ||||| ||||||||||||    
T  12564884 ataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaacaacttatagcttatatgaaaacagtttg 12564964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 17269337 - 17269201
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||| |  |||||| ||||| || |||||||||   |||||| || ||| ||||  |||||||||||| ||||||||| || | ||||| ||||    
T  17269337 cttatgaaaataccttatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaa 17269238  T
Q  555 acagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||| |||| ||| |||||  ||| |||| ||||||||    
T  17269237 acaatttgactttattttcacttttgttctagaaata 17269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 533
Target Start/End: Original strand, 33722410 - 33722462
Alignment:
Q  481 tataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    |||||||||||||| |||||||||||||| |||| ||||||| ||||| ||||    
T  33722410 tataagttgttttcagcttatttccataacctctgtaggataacttatgaaaa 33722462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 595
Target Start/End: Original strand, 36151496 - 36151628
Alignment:
Q  463 aacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttg 562  Q
    |||| ||||||| ||||  ||||  |||||||  ||||||| ||||| |||  |||||| | |||  ||||||| | |||  ||||||||||||| ||||    
T  36151496 aacagtttatgacatgtccataacctgttttcaacttattttcataagctcactaggattgtttacgaaaacaatttataacttatacgaaaacaatttg 36151595  T
Q  563 ccttgattttatcttgtgttatagaaatagctt 595  Q
     ||| |||||||||| |||||| ||||||||||    
T  36151596 actttattttatcttttgttattgaaatagctt 36151628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 509
Target Start/End: Complemental strand, 37416890 - 37416838
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    |||||||||| ||||||||||||| ||||| ||||||| | ||||||||||||    
T  37416890 tatgaaaacactttatgaaatgttcataagctgttttcagtttatttccataa 37416838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 4215426 - 4215339
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc 575  Q
    |||||||  ||||||| ||||||||||  |||||| ||||  ||||| ||| |||| ||||| |||||||||||| ||| ||||||||    
T  4215426 tgttttcaccttatttgcataaactctcaaggataacttacgaaaacgactcatagtttatatgaaaacagtttgactttattttatc 4215339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 577
Target Start/End: Original strand, 5592695 - 5592790
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    ||||||||||| | |||||||| ||||| ||||| ||  |||||||| ||||||||| |||| ||||| || |||| || | ||| ||||||||||    
T  5592695 ataagttgtttccagcttattttcataagctcttaagactagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatctt 5592790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 535
Target Start/End: Original strand, 28077069 - 28077132
Alignment:
Q  472 tgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||| ||||||||||||| ||||||||| |||| |||| ||  ||||||||| ||||||    
T  28077069 tgaaatgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaaca 28077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 595
Target Start/End: Original strand, 33185942 - 33186080
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||| |||||| || |  ||||  |||||||  ||||||| |||| | ||| ||||||||||||||||||||||| |||  || ||  ||||    
T  33185942 ttatgaaaacaaattatgacatttccataacctgttttcaacttatttacatata-tctctaggatagcttataaaaacaacttataacttgtataaaaa 33186040  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    || || | | | |||||||||| ||| |||||||||||||    
T  33186041 caattcgaccttattttatcttctgtaatagaaatagctt 33186080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 645
Target Start/End: Original strand, 172676 - 172750
Alignment:
Q  571 ttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    ||||||| ||||||||||||||||| | ||| || ||||||| |||| |||| ||  ||| ||||||||||||||    
T  172676 ttatcttttgttatagaaatagcttatacataagagtttatgttataagttggaatttaagctgtttatccaaac 172750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 585
Target Start/End: Original strand, 4363651 - 4363745
Alignment:
Q  491 tttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttata 585  Q
    |||||||||| ||| | |||||||| |||||||||||| |||| |  | |||| ||||| |||||||||||| | | |||| ||||| |||||||    
T  4363651 tttcggcttacttcaacaaactcttcaggatagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatcttttgttata 4363745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 577
Target Start/End: Complemental strand, 6262825 - 6262704
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||| || |||||| ||||  ||||||||||||  ||||||||| || |||||| ||  | |||| ||||||| | || |||| |||||  |||    
T  6262825 cttatgaaaataacttatgatatgtccataagttgttttaagcttatttctatgaactctctattacagctgataaaaa-agcttatagcttatataaaa 6262727  T
Q  555 acagtttgccttgattttatctt 577  Q
    | |||||| ||||||||||||||    
T  6262726 atagtttgacttgattttatctt 6262704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 11893603 - 11893649
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||||||||| |||||||||||||||||||| |  |||||||||    
T  11893603 ataagttgttttcagcttatttccataaactcttcaaaatagcttat 11893649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 589
Target Start/End: Original strand, 25006081 - 25006151
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaa 589  Q
    |||||||||| ||||||||| |||| ||||| ||||||| |||| ||| |||||| | | |||||||||||    
T  25006081 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttaccgtctgttatagaaa 25006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 27140551 - 27140485
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| ||||  ||||||||||||| |||||||| ||||| ||||  | |||||||||||||||||    
T  27140551 ttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaaca 27140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 30259496 - 30259610
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagctt-ataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    |||| ||||||||  ||||||||||||| ||||  | |||||||| ||  ||||| || |||| |||||  ||| ||||||| ||| ||||||| || ||    
T  30259496 ataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttg 30259595  T
Q  581 ttatagaaatagctt 595  Q
    |||||||||||||||    
T  30259596 ttatagaaatagctt 30259610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 645
Target Start/End: Original strand, 35058903 - 35058945
Alignment:
Q  603 agtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    |||| |||||||||| |||||||||||| ||||||||||||||    
T  35058903 agtgcttatgctataagttgcaaaataagctgtttatccaaac 35058945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 630
Target Start/End: Original strand, 42757223 - 42757324
Alignment:
Q  530 aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt-tttcattagtg-tttatgctatatgttgcaaaa 627  Q
    |||||| || |||||||||||||||| | || |  |||||||||||||||||||| ||||||| || | | || |||| ||||||||||||| |||||||    
T  42757223 aaaacagcttatagattatacgaaaaaaatt-gatttgattttatcttgtgttatggaaatagattatatgataagtgttttatgctatatgctgcaaaa 42757321  T
Q  628 taa 630  Q
    |||    
T  42757322 taa 42757324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 562
Target Start/End: Complemental strand, 44422745 - 44422679
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttg 562  Q
    |||||||| ||||| ||||  ||||||||||||||||| | || |||| ||||| ||||||||||||    
T  44422745 gcttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttg 44422679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 521 - 591
Target Start/End: Complemental strand, 49517091 - 49517021
Alignment:
Q  521 tagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    |||||||| |||||| || |||| ||| | ||||||| |||| ||| |||||||||| |||||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 604
Target Start/End: Complemental strand, 3224533 - 3224361
Alignment:
Q  431 acttgtaacactgatttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataa 530  Q
    |||||| ||||| |||||||| || ||||  |||| | |||||| ||||  |||||||||| || |||||||| |||||  ||| ||| |||||||||||    
T  3224533 acttgtgacact-atttgagagaatttatacaaactacttatgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataa 3224435  T
Q  531 aaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattag 604  Q
    ||||| |  |||| ||||| |||  || |||| ||| | || ||| | ||||||| ||||||||| | ||||||    
T  3224434 aaacaccctatagcttatatgaattcaatttgactttacttgatcctttgttatataaatagcttatacattag 3224361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 14128458 - 14128530
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    |||||||||||||| |||| | ||  ||||| ||| |||| |||||||||||||| |||||||||||| |||||    
T  14128458 cttatgaaaacaatctatgca-tgaatataaattgctttcagcttatttccataagctctttaggataacttat 14128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 595
Target Start/End: Original strand, 33723360 - 33723505
Alignment:
Q  450 gaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    ||||||||||| |||||  | |||| ||||| || || ||||||| |||||||||||||| || |  ||| |||||||| ||||||  | |||| |||||    
T  33723360 gaaaacttatggaaacagctcatgacatgttcatgagatgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttata 33723459  T
Q  550 cgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
     ||||||| |||| ||| || ||||    | |||||||||||||||    
T  33723460 tgaaaacaatttgactttatgttattgattcttatagaaatagctt 33723505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 34290309 - 34290228
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatac 550  Q
    |||||| || || ||||||||||||| |||||||| |||||  |||| | |||||||||| |||||| || |||| ||||||    
T  34290309 ttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatac 34290228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 645
Target Start/End: Original strand, 34619474 - 34619551
Alignment:
Q  568 attttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    |||||||||| |||||||||||| |||| | ||| ||   |||||||||| | |||||| ||| ||||||||||||||    
T  34619474 attttatcttttgttatagaaatggcttatacataagcaattatgctataagctgcaaattaagctgtttatccaaac 34619551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 543
Target Start/End: Original strand, 39347977 - 39348038
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    ||||||||||||| |||||||||||||| || |  ||||||| |||| ||||||||| ||||    
T  39347977 ataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatag 39348038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 531
Target Start/End: Original strand, 43954055 - 43954104
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaa 531  Q
    ||||||||||||| |||||| ||||||| ||||| |||||| ||||||||    
T  43954055 ataagttgttttcagcttatctccataagctcttcaggataacttataaa 43954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 538
Target Start/End: Complemental strand, 44251601 - 44251540
Alignment:
Q  477 tgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    |||||||||||| ||||| ||||||||| |||| || |||| | |||||||| |||||||||    
T  44251601 tgtttataagtttttttcagcttatttctataatctttttatgctagcttatgaaaacaact 44251540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 562
Target Start/End: Complemental strand, 45394204 - 45394095
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||||| |||||||  |||||| ||||  ||||| |||||||  |||||||| ||||||| |  |||||| ||||| |||| |  ||||||||||||  |    
T  45394204 aacttaagaaaacagcttatgagatgtcgataagctgttttcaacttatttcaataaactttacaggataacttatgaaaagagataatagattatataa 45394105  T
Q  553 aaacagtttg 562  Q
    ||||||||||    
T  45394104 aaacagtttg 45394095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 51929785 - 51929838
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||| || ||||||||||||||||||| |||| ||| ||||||||| ||||||    
T  51929785 ataagctgatttcggcttatttccataagctctctagaatagcttatgaaaaca 51929838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 4201935 - 4201979
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactc 513  Q
    |||||| | ||||||||||||| ||| ||||||||||||||||||    
T  4201935 ttatgacaagtttataagttgtgttcagcttatttccataaactc 4201979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 6659574 - 6659502
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||| ||||||||| |||| |||| | || |||||||| |||||| || |||| ||||| ||||    
T  6659574 ataagttgttttcagcttatttcgataagctctcttggttagcttatgaaaacatcttatagcttatatgaaa 6659502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 483 - 591
Target Start/End: Complemental strand, 11129304 - 11129196
Alignment:
Q  483 taagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgtt 582  Q
    |||| ||||||||| |||||||||||| ||||  |  |||| |||  ||||||||  ||| |||||||||||  |||||| ||| |||||||||| ||||    
T  11129304 taagctgttttcggtttatttccataagctctccaaaatagtttacgaaaacaacctatatattatacgaaagtagtttgacttaattttatcttttgtt 11129205  T
Q  583 atagaaata 591  Q
      |||||||    
T  11129204 caagaaata 11129196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 592
Target Start/End: Complemental strand, 15361768 - 15361661
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatct--tgtgttat 584  Q
    |||||||| ||||| |||||||||||||  || ||| ||||| |||||| || |||| ||||| ||||| | |||| ||| | |||||||  | ||||||    
T  15361768 ttgttttcagcttaattccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttactttatcttctttgttat 15361669  T
Q  585 agaaatag 592  Q
    ||||||||    
T  15361668 agaaatag 15361661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 35590905 - 35590977
Alignment:
Q  485 agttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaaca 557  Q
    |||||||||| |||||||||||||| ||||  | |||||||||| ||| | ||| |||| |||||| ||||||    
T  35590905 agttgttttcagcttatttccataagctctccatgatagcttatgaaatcgacttatagcttatacaaaaaca 35590977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 431 - 503
Target Start/End: Original strand, 37941945 - 37942016
Alignment:
Q  431 acttgtaacactgatttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttattt 503  Q
    ||||||||| ||| ||||||| | |||||  ||||||||||||| ||||  |||||||||| |||||||||||    
T  37941945 acttgtaacgctg-tttgagagagcttatagaaacaatttatgacatgtccataagttgttctcggcttattt 37942016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 42336712 - 42336656
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttat 501  Q
    ||||||| ||||||||||||||| |||||| ||||  | |||||||||||| |||||    
T  42336712 tttgagataacttatgaaaacaacttatgacatgtccaaaagttgttttcgacttat 42336656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 538
Target Start/End: Original strand, 47598431 - 47598487
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    ||||||||||||| |||| || |||||| ||||  |||||||||||| |||||||||    
T  47598431 ataagttgttttcagcttgttgccataagctctccaggatagcttatgaaaacaact 47598487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 591
Target Start/End: Complemental strand, 49557208 - 49557092
Alignment:
Q  481 tataagttgttttcggcttatttccata----aactctttaggatagcttata--aaaacaactaatagattatacgaaaacagtttgccttgattttat 574  Q
    |||||||||||||| ||||||||| |||    | ||||| |||||||||||||  ||||||||| |||| ||| | ||| ||  |||  ||| |||||||    
T  49557208 tataagttgttttcagcttatttctataagctagctcttcaggatagcttatatgaaaacaacttatagcttaaatgaatactatttaactttattttat 49557109  T
Q  575 cttgtgttatagaaata 591  Q
    ||| |||||||||||||    
T  49557108 cttttgttatagaaata 49557092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 595
Target Start/End: Original strand, 40122736 - 40122875
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||| | ||||||| || | |||||||||||||  |||||||||||| |||| ||||||||||||||||||||||||| |||| || || ||||    
T  40122736 cttatgaaaatagtttatgacatctctataagttgtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaa 40122834  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| ||| |||||||||| |||||| ||||||||||    
T  40122835 acagtttgactttattttatcttttgttattgaaatagctt 40122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 469 - 601
Target Start/End: Complemental strand, 24785278 - 24785146
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| ||||| ||||||||||||  |||||||| ||||| ||||  |||||||||||| ||||||  | ||||||||||| ||||||| ||| ||| |    
T  24785278 ttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgacttta 24785179  T
Q  569 ttttatcttgtgttatagaaatagctttttcat 601  Q
    |||||||||||| | ||||||||| || |||||    
T  24785178 ttttatcttgtgatttagaaataggttattcat 24785146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 460 - 601
Target Start/End: Complemental strand, 36101650 - 36101509
Alignment:
Q  460 gaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagt 559  Q
    |||||||  |||||| ||||| | ||| ||||||| |||||||| ||||| ||||| |||||||  ||   |||||||| ||||||||||||||| ||||    
T  36101650 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatagtataatgaaacaacttatagattatacgaaatcagt 36101551  T
Q  560 ttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||| ||| |||||||||| | ||| ||||||||||| |||||    
T  36101550 ttgactttattttatcttatattacagaaatagcttattcat 36101509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 595
Target Start/End: Complemental strand, 38462341 - 38462228
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||||||||||| |||||||||||||| || | | ||||||||||| ||||||  | ||||  |||| |||||||||||| ||| |||||||||| ||     
T  38462341 ataagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttgg 38462242  T
Q  582 tatagaaatagctt 595  Q
    ||||||||||||||    
T  38462241 tatagaaatagctt 38462228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 595
Target Start/End: Original strand, 24887299 - 24887406
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    ||||||| ||||||| |||||| ||||  |||||||||||| |||||| ||  ||| ||||| ||| |||||||| ||| |||||||||  |||||||||    
T  24887299 tgttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttataga 24887398  T
Q  588 aatagctt 595  Q
    ||||||||    
T  24887399 aatagctt 24887406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 606
Target Start/End: Original strand, 47904087 - 47904197
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||| ||| ||||| | |||||||||| ||||| ||| |||||||||| ||||| || |||  || ||||||| ||| ||||||||||||||||    
T  47904087 gcttatttccgtaagctcttcacgatagcttatgaaaaccacttatagattatatgaaaatagcttgatttcattttatgttgcgttatagaaatagctt 47904186  T
Q  596 tttcattagtg 606  Q
     ||||| ||||    
T  47904187 attcataagtg 47904197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 574
Target Start/End: Original strand, 19679301 - 19679430
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| |||||| |||||||| |||||| ||| | | ||| ||||| | |||||||||  | ||||||  | ||||| |||||||||||||| ||||     
T  19679301 tttgagagaacttacgaaaacaacttatgacatgctaaaaagctgtttgcagcttatttcttttaactctccaagatagtttataaaaacaacttatagc 19679400  T
Q  545 ttatacgaaaacagtttgccttgattttat 574  Q
    ||||| |||||||||||| ||| |||||||    
T  19679401 ttataagaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 601
Target Start/End: Complemental strand, 36139960 - 36139819
Alignment:
Q  460 gaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagt 559  Q
    |||||||  |||||| ||||| | ||| ||||||| |||||||| ||||| ||||| | |||||  ||   |||||||| |||| |||||||||| ||||    
T  36139960 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatagtataatgaaacaacttatagcttatacgaaatcagt 36139861  T
Q  560 ttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||| ||| |||||||||| | ||| ||||||||||| |||||    
T  36139860 ttgactttattttatcttatattacagaaatagcttattcat 36139819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 36646392 - 36646505
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||| |||||||  |||||||| ||||||||| ||||||||||||| ||||||| | |||  ||||| ||||||| ||   ||| |||||||||| |||    
T  36646392 ataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataacttatatgaaaacaattatactttattttatcttttgt 36646491  T
Q  582 tatagaaatagctt 595  Q
     |||||||||||||    
T  36646492 catagaaatagctt 36646505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 589
Target Start/End: Complemental strand, 2318703 - 2318596
Alignment:
Q  484 aagttgttttcggcttatttccataaactctttagga-tagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttg-tgt 581  Q
    ||||||||||| ||||||||| |||| ||||  | || || ||||||||||||||| |||| ||||| ||||||| ||||  |||||||||||||| |||    
T  2318703 aagttgttttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttatcttgttgt 2318604  T
Q  582 tatagaaa 589  Q
    ||||||||    
T  2318603 tatagaaa 2318596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 592
Target Start/End: Original strand, 45432936 - 45433059
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| ||||| ||||||||||||| |||||||||||||| ||||  |||||  ||| | ||||||| | |||| | ||| ||||||| |||  ||| |    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaatttatagctcatatgaaaacaatttaacttca 45433035  T
Q  569 ttttatcttgtgttatagaaatag 592  Q
    ||||||||| | ||||||||||||    
T  45433036 ttttatcttttcttatagaaatag 45433059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 12985355 - 12985408
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  12985355 ataagttgttttcggcttatttccataagttcttgaggatagcttatgaaaaca 12985408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 445 - 574
Target Start/End: Original strand, 14548694 - 14548823
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| | |||||||||||||  ||||| || || ||| | ||||||| |||||||||||||| ||||  || ||| ||||| ||||||||| ||||     
T  14548694 tttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagc 14548793  T
Q  545 ttatacgaaaacagtttgccttgattttat 574  Q
    ||||| ||||||  ||||  ||||||||||    
T  14548794 ttatatgaaaactttttgatttgattttat 14548823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 577
Target Start/End: Complemental strand, 1816668 - 1816548
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaac 556  Q
    |||||||| || |||||| || || ||| | ||||||| ||||||||  |||| ||||  || ||||||||| ||||||||| |||  |||||| |||||    
T  1816668 tatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaac 1816569  T
Q  557 agtttgccttgattttatctt 577  Q
    |||||| ||| ||||||||||    
T  1816568 agtttgactttattttatctt 1816548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 595
Target Start/End: Complemental strand, 27792935 - 27792819
Alignment:
Q  479 tttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttg 578  Q
    |||||||||||||||| ||||||||| |||| ||||  | ||||| |||| |||||||||   || ||||| ||||| |||||| | | ||||||||||     
T  27792935 tttataagttgttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttt 27792836  T
Q  579 tgttatagaaatagctt 595  Q
    |||| | ||||||||||    
T  27792835 tgtttttgaaatagctt 27792819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 596
Target Start/End: Original strand, 36783382 - 36783458
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagcttt 596  Q
    ||||||||| |||||| ||||||| ||||| ||||||| |||  ||| |||||||||| || |||||||||||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaatagcttt 36783458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 22214669 - 22214744
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaaca 557  Q
    ||||| ||||||| |||||||||| |||  ||| ||||||||||||| ||||||||| |||| ||||| |||||||    
T  22214669 ataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttataggttatatgaaaaca 22214744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 49586984 - 49587039
Alignment:
Q  540 atagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagctt 49587039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 581
Target Start/End: Complemental strand, 21574577 - 21574452
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||| |||||| ||||| ||||| || |||  |||||||||||||| ||||  | | ||||||||||||| || | |||| ||||| | ||    
T  21574577 cttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa-aagttatagcttatatgtaa 21574479  T
Q  555 acagtttgccttgattttatcttgtgt 581  Q
    ||| |||  ||| ||||||||||||||    
T  21574478 acaatttaactttattttatcttgtgt 21574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 21862185 - 21862299
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttg-attttatcttgtg 580  Q
    ||||||||||||| |||||||||||||| ||||    ||||||| || | ||| ||| |||| ||||| ||||||| |||| |||| |||||||||| ||    
T  21862185 ataagttgttttcagcttatttccataagctctcccagatagctaatgagaactactcatagcttatatgaaaacaatttgacttgtattttatcttttg 21862284  T
Q  581 ttatagaaatagctt 595  Q
    | ||||||| |||||    
T  21862285 taatagaaacagctt 21862299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 592
Target Start/End: Complemental strand, 34954083 - 34954033
Alignment:
Q  542 agattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||||||| |||||||| ||| ||| |||||||||||||||||||||||||    
T  34954083 agattatatgaaaacagcttgactttattttatcttgtgttatagaaatag 34954033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 557
Target Start/End: Complemental strand, 21367757 - 21367652
Alignment:
Q  453 aacttatgaaaacaatttatgaaat-gtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacg 551  Q
    ||||||||||||||  |||||| || ||| | ||| ||||||| |||||||| |||||  |||  | |||||||||| ||||||||| ||| ||||||||    
T  21367757 aacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacg 21367658  T
Q  552 aaaaca 557  Q
    ||||||    
T  21367657 aaaaca 21367652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 577
Target Start/End: Complemental strand, 23315672 - 23315591
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    |||||||||||||| |||||||| |||||||||  ||||| || ||||  |||| ||||||| |||| ||| ||||||||||    
T  23315672 gcttatttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatctt 23315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 27290884 - 27291018
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||  |||||| |||   ||||| ||||||| |||||||||||| ||||||  ||||||||| ||  ||||| ||  ||||||||| ||||    
T  27290884 cttatgaaaacagcttatgacatgcccataagctgttttcagcttatttccatgaactctgcaggatagctaatgcaaacagcttttagattatatgaaa 27290983  T
Q  555 acagtttgccttgattttatcttgtgttatagaaata 591  Q
    | |||| |  || |||||||||  |||||||||||||    
T  27290984 aaagttcgaatttattttatct--tgttatagaaata 27291018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 585
Target Start/End: Complemental strand, 37788882 - 37788817
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttata 585  Q
    ||||||||| ||||||||| |||||||||||||||| | || | ||| |||||||||| |||||||    
T  37788882 atagcttatgaaaacaacttatagattatacgaaaataattggactttattttatcttttgttata 37788817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 595
Target Start/End: Original strand, 43116478 - 43116551
Alignment:
Q  522 agcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||| ||||| ||| |||| ||||| |||||  |||||  ||||||||||||| |||||||||||||||||    
T  43116478 agcttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagctt 43116551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 595
Target Start/End: Complemental strand, 52619095 - 52618950
Alignment:
Q  450 gaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    ||||||| || |||||||||||||| ||||| ||||| | |||||  ||||||| || || ||||| | |||||||| | |||||| || |||  |||||    
T  52619095 gaaaactaataaaaacaatttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttata 52618996  T
Q  550 cgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
     ||||||| |||  ||| |||| ||| | |||| ||||||||||||    
T  52618995 tgaaaacaatttaactttatttaatcatttgttttagaaatagctt 52618950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 5457109 - 5457073
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttg 489  Q
    |||||||||||||||||||||||||||| ||||||||    
T  5457109 aacttatgaaaacaatttatgaaatgttgataagttg 5457073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 36200176 - 36200108
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataa 530  Q
    |||||| |||||| ||||  ||||||||||||| |||||||||||| | ||||  ||||||||||||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttataa 36200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 509
Target Start/End: Original strand, 47249467 - 47249523
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||||||||||| | |||||| ||||| |||||||||||| ||||||||| |||||    
T  47249467 aacttatgaaaaccacttatgacatgttcataagttgtttttggcttattttcataa 47249523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 615
Target Start/End: Complemental strand, 139959 - 139912
Alignment:
Q  568 attttatcttgtgttatagaaatagctttttcattagtgtttatgcta 615  Q
    |||||||||||||| ||||||||||||| ||||| |||| ||||||||    
T  139959 attttatcttgtgtaatagaaatagcttattcataagtgcttatgcta 139912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 30322046 - 30322109
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||||||||| |||||||||||| ||||| ||||||||| | || |||| || |||||||||    
T  30322046 ttatttccataagctctttaggataacttatgaaaacaacttacagcttattcggaaacagttt 30322109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 611
Target Start/End: Complemental strand, 34958318 - 34958259
Alignment:
Q  552 aaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttat 611  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| || ||||| |||| ||||    
T  34958318 aaaacagcttgactttattttatcttgtgttatagaaatagtttattcataagtgcttat 34958259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 42745124 - 42745053
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagctta 527  Q
    ||||| |||||| |||||| ||||| |||||||||||||  ||||||||||||| || || | |||||||||    
T  42745124 ttatgtaaacaacttatgacatgttcataagttgttttcatcttatttccataagcttttgaagatagctta 42745053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 561
Target Start/End: Original strand, 20502083 - 20502157
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||||| |||||||  ||||| ||||| |||||||||||| |||||| || ||||  |||| |||||||||||    
T  20502083 ttgttttcagcttattctcataagctcttcaggatagcttatgaaaacagcttatagcgtatatgaaaacagttt 20502157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 31403207 - 31403153
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaa 536  Q
    ||||| ||||||| ||||||| |||| |||||| ||||||||||||| |||||||    
T  31403207 ataagctgttttcagcttattaccatgaactctctaggatagcttatcaaaacaa 31403153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 551
Target Start/End: Complemental strand, 34383039 - 34382933
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| | |||||| |||||  |||||| |||| ||||||||||||||  ||||||| | ||| || || |||||||||||| |||| |||| |||      
T  34383039 tttgagatagcttatggaaacagattatgatatgtctataagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaagaacttataac 34382940  T
Q  545 ttatacg 551  Q
    |||||||    
T  34382939 ttatacg 34382933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 503
Target Start/End: Complemental strand, 41724309 - 41724251
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttattt 503  Q
    |||| ||||||||||| |||||| |||||| ||||  ||||||||||||| ||||||||    
T  41724309 tttgtgaaaacttatggaaacaacttatgacatgtccataagttgttttcagcttattt 41724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 591
Target Start/End: Original strand, 3044249 - 3044378
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||||| ||||| ||||| |||||||  ||||||| ||||| ||||  ||| |||| ||  ||||||  | |||||||||| |||||||| ||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttatagattatatgaaaacagatt 3044348  T
Q  562 gccttgattttatcttgtgttatagaaata 591  Q
    |  || ||||| ||||  ||||||||||||    
T  3044349 ggttttattttgtctttcgttatagaaata 3044378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 13709833 - 13709886
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||| | ||||||| |||||||||  |||||||||||| ||||||    
T  13709833 ataagttgttttcagtttatttcaataaactctccaggatagcttatgaaaaca 13709886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 591
Target Start/End: Complemental strand, 23785315 - 23785206
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||||||||||| |||| ||||||||| ||||  | || ||||| | ||||||  | |||| ||||| ||| |||||||| ||| |||||||||| ||     
T  23785315 ataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatacagtttgactttattttatcttctgc 23785216  T
Q  582 tatagaaata 591  Q
    | ||||||||    
T  23785215 tgtagaaata 23785206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 576
Target Start/End: Original strand, 25453842 - 25453963
Alignment:
Q  456 ttatgaaaacaatttatgaaa-tgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||||  |||||||| |||| | ||| | ||||| |||||||| ||||| || |  ||||||| |||| |||| |  | |||| ||||||||||    
T  25453842 ttatgaaaacagcttatgaaaatgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaataggttataggttatacgaaa 25453941  T
Q  555 acagtttgccttgattttatct 576  Q
    |||||||| ||| |||||||||    
T  25453942 acagtttgactttattttatct 25453963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 533
Target Start/End: Complemental strand, 26479007 - 26478954
Alignment:
Q  480 ttataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    ||||||||||||||   ||||||| |||| ||||||||||||||||||| ||||    
T  26479007 ttataagttgtttttaacttattttcatatactctttaggatagcttatgaaaa 26478954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 539
Target Start/End: Complemental strand, 26542617 - 26542540
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaacta 539  Q
    |||||| |||||| |||| ||||| ||||||||  ||||||||||||||||||  |  ||||||||| |||| |||||    
T  26542617 aaacaacttatgatatgtctataacttgttttcaacttatttccataaactctccataatagcttatgaaaataacta 26542540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 595
Target Start/End: Original strand, 42084301 - 42084374
Alignment:
Q  522 agcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||| |||||||||||||| |||||  ||||||  ||| | | |||||||| | |||||||||||||||||    
T  42084301 agcttatgaaaacaactaatagcttatatcaaaacaagttgacattattttatcctttgttatagaaatagctt 42084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 549
Target Start/End: Complemental strand, 43115142 - 43115049
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    ||||| |||||| |||||| ||||  |||| |||||||| |||||||||||||| ||||  | ||||| | || ||||||||| |||| |||||    
T  43115142 ttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaaacaacttatagcttata 43115049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 630
Target Start/End: Complemental strand, 44014253 - 44014192
Alignment:
Q  569 ttttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataa 630  Q
    |||||||||  |||||||||||||||| | ||| |||| |||||||||| | ||||||||||    
T  44014253 ttttatctttagttatagaaatagcttatacataagtggttatgctataggctgcaaaataa 44014192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 445 - 529
Target Start/End: Original strand, 23808037 - 23808121
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttata 529  Q
    |||| |||||||||||||| ||  |||||| ||||| | || ||||||||  ||||||| ||||||||||  | |||||||||||    
T  23808037 tttgggaaaacttatgaaagcagcttatgacatgttcacaaattgttttcatcttattttcataaactctccaagatagcttata 23808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 453 - 549
Target Start/End: Original strand, 30573895 - 30573991
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    ||||||||||||||| |||||  ||||| ||||| ||||||| |||||| | ||| | ||||  | |||||||||| |||||| |  ||||||||||    
T  30573895 aacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaacatcatatagattata 30573991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 595
Target Start/End: Original strand, 30956673 - 30956749
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| | ||||||||| ||||  ||||| |||||| |||  ||| |||||||||| || ||||||||||||||    
T  30956673 gatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagctt 30956749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 595
Target Start/End: Original strand, 30972485 - 30972561
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| | ||||||||| ||||  ||||| |||||| |||  ||| |||||||||| || ||||||||||||||    
T  30972485 gatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagctt 30972561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 535
Target Start/End: Complemental strand, 37273221 - 37273141
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| |||||| |||||| ||||  |||||||||||||  |||||||||||||  |||  | |||||||||| ||||||    
T  37273221 cttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 12110447 - 12110257
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||| |||||| ||||| | ||  ||||||  | |||||| |||||  |||| | |||||||||| |||||| || |||| |||||| |||    
T  12110447 cttatgaaaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaa 12110348  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    ||| |||| ||| |||||||||||||| |||||||||| || ||||| |||| |||||||||| |||||||| ||| ||||||||| ||||    
T  12110347 acaatttgactttattttatcttgtgtaatagaaataggttattcataagtgcttatgctataagttgcaaattaagctgtttatcgaaac 12110257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 595
Target Start/End: Original strand, 3610758 - 3610863
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaa 589  Q
    ||||| ||||||||| |||| |||| |||||||| |||  ||||||||| |||| |||||| ||||||||||||||| |||||||||| |||| ||||||    
T  3610758 ttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaa 3610857  T
Q  590 tagctt 595  Q
    ||||||    
T  3610858 tagctt 3610863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 455 - 595
Target Start/End: Complemental strand, 33894714 - 33894570
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagctta-----taaaaacaactaatagattata 549  Q
    ||||||||||||   ||||| ||||  ||||||||||||| ||||||||| ||||||| |  |||||||||||     ||||||||||  | || |||||    
T  33894714 cttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagcttaagttgtaaaaacaacataaagcttata 33894615  T
Q  550 cgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
     |||||||||||| ||| |||||||||| |||||||||||||||||    
T  33894614 tgaaaacagtttgactt-attttatcttttgttatagaaatagctt 33894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 506 - 639
Target Start/End: Original strand, 44917570 - 44917703
Alignment:
Q  506 ataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagt 605  Q
    |||| ||||||||||| | ||||  |||||||| ||||||||||| ||||||||||| |||   |||||| ||||||||||||| | ||| || || ||     
T  44917570 ataatctctttaggatggtttatggaaacaacttatagattatacaaaaacagtttgactttgctttatcctgtgttatagaaacaacttatttataagc 44917669  T
Q  606 gtttatgctatatgttgcaaaataaactgtttat 639  Q
    | ||||||| || | |||||||||||||||||||    
T  44917670 gcttatgctttaagctgcaaaataaactgtttat 44917703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 557
Target Start/End: Original strand, 25670559 - 25670671
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||||||||||||||||||| |||||| ||||| |||| |||||||| |||||||| || || ||||  | ||||  |||||||||||| | ||||     
T  25670559 tttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgttataaaaacaattgatagc 25670658  T
Q  545 ttatacgaaaaca 557  Q
    ||||| |||||||    
T  25670659 ttatatgaaaaca 25670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 601
Target Start/End: Complemental strand, 46945952 - 46945850
Alignment:
Q  499 tatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagcttttt 598  Q
    ||||||||||| |||||  ||||||||||  ||||||| | |||||||||||   |||| ||||  ||||||||||||||||||||| ||||||||| ||    
T  46945952 tatttccataagctcttcgggatagcttaagaaaacaaattatagattatacatgaacaatttgatttgattttatcttgtgttatacaaatagcttatt 46945853  T
Q  599 cat 601  Q
    |||    
T  46945852 cat 46945850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 453 - 626
Target Start/End: Complemental strand, 30535652 - 30535479
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||| |||||| |||||  |||| ||||||| | |||||| ||||   ||| || ||||||||||  ||||| || |||||||||||||    
T  30535652 aacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagcttatagattatacga 30535553  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaa 626  Q
    ||||| ||    || |||||||||| |||||||||| || ||| | | | |||| |||||||||| | ||||||    
T  30535552 aaacacttcaatttaattttatcttttgttatagaagtaacttatacgtaagtgcttatgctataagctgcaaa 30535479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 568 - 645
Target Start/End: Original strand, 41668206 - 41668283
Alignment:
Q  568 attttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    ||||||||||| |||||||||||||||| ||||| || | |||||||||  | |||||||||| ||||||||||||||    
T  41668206 attttatcttgggttatagaaatagcttattcataagcgcttatgctatcggctgcaaaataagctgtttatccaaac 41668283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 568 - 645
Target Start/End: Original strand, 41668884 - 41668961
Alignment:
Q  568 attttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    ||||||||||| |||||||||||||||| ||||| || | |||||||||  | |||||||||| ||||||||||||||    
T  41668884 attttatcttgggttatagaaatagcttattcataagcgcttatgctatcggctgcaaaataagctgtttatccaaac 41668961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 592
Target Start/End: Original strand, 2727409 - 2727480
Alignment:
Q  521 tagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||||||||||||||| | |||| | ||| ||||| |||||||||| |||||||||| ||||||||||||||    
T  2727409 tagcttataaaaacaatttatagttgatatgaaaagagtttgcctttattttatcttttgttatagaaatag 2727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 445 - 595
Target Start/End: Original strand, 5006484 - 5006632
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    |||| |||| |||||| |||||| |||| | |||| |||||||||||||   ||| |  |||| ||||||  ||| |||||||| ||||||| | |||      
T  5006484 tttgtgaaagcttatggaaacaacttataacatgtctataagttgtttttaccttct--ccatgaactctccagggtagcttatgaaaacaatttatacc 5006581  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| |||||||||||| ||| |||||||||| |||||||| ||||||||    
T  5006582 ttatatgaaaacagtttgactttattttatcttttgttataggaatagctt 5006632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 456 - 535
Target Start/End: Original strand, 9423578 - 9423657
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||| ||||||||||||| ||||| ||||||||||||| ||||||||| | || ||||  |||||||||||| ||||||    
T  9423578 ttatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaaca 9423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 444 - 584
Target Start/End: Original strand, 44151448 - 44151592
Alignment:
Q  444 atttgagaaaacttatgaaaacaattt----atgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaacta 539  Q
    |||||||| | ||||||||||||||||    |||| ||||  ||||| ||||||| |||||||||||||| || || | ||||| |||| |||||||||     
T  44151448 atttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaactt 44151547  T
Q  540 atagattatacgaaaacagtttgccttgattttatcttgtgttat 584  Q
    |||| ||||| | |||||||||  ||| ||| |||||| ||||||    
T  44151548 atagcttatatggaaacagttttactttattctatcttttgttat 44151592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 572 - 645
Target Start/End: Complemental strand, 6824888 - 6824816
Alignment:
Q  572 tatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    |||||| ||||||||||||||||| | ||| || |||||||||||| | |||||| ||||||||||||||||||    
T  6824888 tatcttttgttatagaaatagcttatacat-agcgtttatgctataaggtgcaaattaaactgtttatccaaac 6824816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 577
Target Start/End: Original strand, 12234879 - 12234992
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||||| |||| |||||| ||||||| |||||||||||||| |||| ||||| |||| |||||||   || |||  |||||||||||||| ||    
T  12234879 aaacaacttatgacatgtctataagctgttttcagcttatttccataagctctctaggaaagctcataaaaat--cttataacttatacgaaaacagatt 12234976  T
Q  562 gccttgattttatctt 577  Q
    | | | ||||||||||    
T  12234977 gacattattttatctt 12234992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 538
Target Start/End: Original strand, 24363611 - 24363667
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||||| |||||||||    
T  24363611 ataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaact 24363667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 589
Target Start/End: Complemental strand, 28165156 - 28165044
Alignment:
Q  477 tgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatct 576  Q
    |||| ||||| |||||||  ||||||||||||| ||||  | ||||||||||||| |||  | |||| |||||  |||||| |||| ||| |||||||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatct 28165057  T
Q  577 tgtgttatagaaa 589  Q
    | |||||||||||    
T  28165056 tttgttatagaaa 28165044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 593
Target Start/End: Original strand, 9527140 - 9527211
Alignment:
Q  522 agcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    ||||||| ||||||||| |||| ||||| |||||||||||| ||| ||| |||||| ||||||||| |||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatcttttgttatagatatagc 9527211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 498 - 585
Target Start/End: Original strand, 17989049 - 17989136
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttata 585  Q
    |||||| ||||| ||||| |||| ||||||| ||||||| | |||| ||||| |||||||||||| ||| ||||||| || |||||||    
T  17989049 ttattttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttatattttgttata 17989136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 595
Target Start/End: Original strand, 27481310 - 27481417
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    |||||| || |||||||||||| || |  | |||||||||| |||| |||| |||| ||||| | |||||||||| |||  ||||||| | |||||||||    
T  27481310 tgttttgggtttatttccataagctatccatgatagcttatgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttataga 27481409  T
Q  588 aatagctt 595  Q
    ||||||||    
T  27481410 aatagctt 27481417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 591
Target Start/End: Complemental strand, 38010780 - 38010665
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc 575  Q
    ||||| ||||| ||||||  ||||||||||||||  ||| |||||||| |||| |||||| || |||| ||||| ||||||| |||| |||  |||||||    
T  38010780 atgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatc 38010681  T
Q  576 ttgtgttatagaaata 591  Q
    || |||| || |||||    
T  38010680 ttttgttttaaaaata 38010665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 491 - 592
Target Start/End: Complemental strand, 2999243 - 2999141
Alignment:
Q  491 tttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa-cagtttgccttgattttatcttgtgttatagaaa 589  Q
    ||||| |||||||||||||  ||||||| |||||||| | |||||||| | |  ||||| ||||| | ||||| ||| |||||||||| |||||||||||    
T  2999243 tttcgacttatttccataagatctttagaatagcttaaagaaacaacttacatcttatatgaaaaacggtttgactttattttatcttttgttatagaaa 2999144  T
Q  590 tag 592  Q
    |||    
T  2999143 tag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 39169460 - 39169538
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||| ||||||  | ||||||||||| |||||||| || ||| ||||| |||||||| || ||||||||||    
T  39169460 aggatagcttatgaaaacagtttatagattatacaaaaacagtctgacttcattttttcttgtgtaatggaaatagctt 39169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 485 - 595
Target Start/End: Complemental strand, 44910661 - 44910551
Alignment:
Q  485 agttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttat 584  Q
    |||||||||||||||||||||| || ||||  | ||||| |||| |||||||||  ||| || |  ||||| |||||| ||| ||||| |||| || |||    
T  44910661 agttgttttcggcttatttccacaagctctccatgatagtttatgaaaacaacttttagcttgtgtgaaaaaagtttgactttattttctcttttgatat 44910562  T
Q  585 agaaatagctt 595  Q
    |||||||||||    
T  44910561 agaaatagctt 44910551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 2825235 - 2825308
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    ||||| ||||||| ||||| ||||||||||||||  ||| ||||||||||| | ||||||||| |||| |||||    
T  2825235 atgttcataagttattttcagcttatttccataagttctctaggatagcttgtgaaaacaacttatagtttata 2825308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 595
Target Start/End: Complemental strand, 22759230 - 22759133
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||| ||||   ||||||||||| ||| || ||  ||| ||||| ||||||| ||| |||| |||||||||| ||||||| |||||||||    
T  22759230 ttatttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagctt 22759133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 595
Target Start/End: Original strand, 45813238 - 45813303
Alignment:
Q  530 aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||| |||||||||| |||||||  ||| ||| |||||||||| || ||||||||||||||    
T  45813238 aaaacaacttatagattatatgaaaacaagttgactttattttatcttttggtatagaaatagctt 45813303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 494
Target Start/End: Original strand, 1645678 - 1645722
Alignment:
Q  450 gaaaacttatgaaaacaatttatgaaatgtttataagttgttttc 494  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||    
T  1645678 gaaaacttatgtaaacaacttatgacatgtttataagttgttttc 1645722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 533
Target Start/End: Original strand, 26935554 - 26935618
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    ||||||||| || ||||| ||||||| |||||||||||||| |||||||| |||| |||| ||||    
T  26935554 ttatgaaatattcataagctgttttcagcttatttccataagctctttagaatagattatgaaaa 26935618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 528
Target Start/End: Complemental strand, 40428609 - 40428569
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  40428609 tgttttcagcttatttccataagctctttaggatagcttat 40428569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 595
Target Start/End: Complemental strand, 46082123 - 46081980
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagc--ttataaaaacaactaatagattatacga 552  Q
    ||||||||||||| |||||| |||   ||||||||||||| |||||||| ||||| ||||  || |||||   ||| ||||||||| |||  ||||| ||    
T  46082123 cttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataacttatatga 46082024  T
Q  553 aaacag-tttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||| |||| |||  ||||| |||  ||||||||||||||||    
T  46082023 aaacagttttgactttgttttaactttcgttatagaaatagctt 46081980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 592
Target Start/End: Complemental strand, 46086493 - 46086397
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||||||||||||||||||| | |||||| ||| ||||||||  ||||  |||||  ||||| ||||  ||| ||| ||||| ||||||||||||||    
T  46086493 gcttatttccataaactcttcaagatagcctatgaaaacaacctatagtatatactcaaacaatttgatttgttttcatcttttgttatagaaatag 46086397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 592
Target Start/End: Complemental strand, 30496721 - 30496654
Alignment:
Q  525 ttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||| ||||||||  |||| ||||||||||||| |||| ||| ||||||| || ||||||||||||||    
T  30496721 ttatgaaaacaacctataggttatacgaaaacaatttgactttattttatattttgttatagaaatag 30496654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 40530413 - 40530480
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||| ||||| ||||||||  ||||||| |||||  ||||||||||||||||| ||||||||| ||||    
T  40530413 atgtctataaattgttttcaacttattttcataagttctttaggatagcttattaaaacaacttatag 40530480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 585
Target Start/End: Original strand, 45777229 - 45777284
Alignment:
Q  530 aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttata 585  Q
    ||||||||| |||| ||||| |||||||||||| ||| |||||||||| |||||||    
T  45777229 aaaacaacttatagtttatatgaaaacagtttgacttaattttatcttttgttata 45777284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 4966229 - 4966163
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| ||||  ||||||||||||| | |||||||||||| ||||| ||||| |||||| ||||||    
T  4966229 ttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaaaaca 4966163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 595
Target Start/End: Complemental strand, 28440571 - 28440466
Alignment:
Q  490 ttttcggcttatttccataa-actctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaa 588  Q
    ||||| ||||||||| |||| ||| ||||| |||||||||  | ||||||  ||||||||||||||||  |||| ||| |||||||||| |||||  |||    
T  28440571 ttttcagcttatttctataagact-tttagtatagcttatttatacaacttttagattatacgaaaaccatttgactttattttatcttttgttactgaa 28440473  T
Q  589 atagctt 595  Q
    |||||||    
T  28440472 atagctt 28440466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 29363572 - 29363478
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgtt 582  Q
    ||||||||| |||||||||||| ||||  |||||| ||||| | |||| || |||  | ||| |||||||||||| ||| |||||||||| ||||    
T  29363572 tgttttcgggttatttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattttatcttctgtt 29363478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 35536104 - 35536054
Alignment:
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| ||||||| |||| ||| |||||||||| |||||||||||||||||    
T  35536104 ttatatgaaaacaatttgactttattttatcttatgttatagaaatagctt 35536054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 645
Target Start/End: Complemental strand, 45530576 - 45530418
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatag 586  Q
    |||||||| ||| |||||||||| | |||  |||||| |||| |||||||||  || |||||||  ||||||||||  || | |||||||||||||  |     
T  45530576 ttgttttcagctaatttccataatcacttccggatagattatgaaaacaacttttatattatacacaaacagtttgattttaatttatcttgtgtttcat 45530477  T
Q  587 aaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    ||| |||||  |||| |||| ||||||| |  | ||| ||||||  |||||||||||||    
T  45530476 aaaaagcttagtcataagtgcttatgctgttagctgctaaataagttgtttatccaaac 45530418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 7244760 - 7244687
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||| ||| | ||||||||||||| |||||||| ||||| ||||  |  ||||||||| ||||||    
T  7244760 aaacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 546
Target Start/End: Original strand, 20888381 - 20888465
Alignment:
Q  459 tgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagatt 546  Q
    ||||||||| |||||  ||||| ||||||||||||| ||||||||||| |   ||||  |||||||||||| ||||| || |||||||    
T  20888381 tgaaaacaacttatgccatgttcataagttgttttcagcttatttccaca---tcttctggatagcttatagaaacagcttatagatt 20888465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 579
Target Start/End: Complemental strand, 36370713 - 36370633
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgt 579  Q
    |||||||||||| ||||| ||||||| ||||  |||||||| |||| ||||  |||||||||||  ||| ||||||||||||    
T  36370713 ttatttccataagctcttcaggatagtttatggaaacaacttatagcttatgtgaaaacagtttaactt-attttatcttgt 36370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 549
Target Start/End: Original strand, 46104551 - 46104644
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    |||||||||||| | |||| ||||  ||||  ||||| | |||||||| ||||| ||||| || ||||||||| ||||||||| |||| |||||    
T  46104551 ttatgaaaacaactcatgacatgtcaataaaatgtttccagcttattttcataagctcttcagcatagcttatgaaaacaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 578
Target Start/End: Complemental strand, 3468674 - 3468578
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttg 578  Q
    ||||||||||| |  |||||||||| ||  ||| |||||||| |||| |||| | || |||  ||||||||||| |||||| ||| |||||||||||    
T  3468674 ataagttgtttccaacttatttccacaagttctctaggatagattatgaaaaaagcttataacttatacgaaaatagtttgacttcattttatcttg 3468578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 543
Target Start/End: Complemental strand, 20553190 - 20553102
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||||| |||||  ||| || ||||| ||||||||||||| | |||||||||||| |||  ||||||| ||| | ||||||||| ||||    
T  20553190 cttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctcactaggataacttgtgaaaacaacttatag 20553102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 591
Target Start/End: Original strand, 28128410 - 28128513
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatag 586  Q
    |||||||| ||||||||||||||| |||  |  |||||||| | ||||| || |||| || || ||||| | |||| ||| |||||||||||||| ||||    
T  28128410 ttgttttcagcttatttccataaattctccaaaatagctta-ataaacagctgatagcttctatgaaaataatttgacttcattttatcttgtgtaatag 28128508  T
Q  587 aaata 591  Q
    |||||    
T  28128509 aaata 28128513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 30456476 - 30456572
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||| ||||| ||||  | ||||| |||| ||||| ||| |||  ||||| ||||||| |||| ||| |||||||||| |||| |||||||||||    
T  30456476 ttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgttttagaaatagct 30456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 33294555 - 33294603
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgtttt 493  Q
    ||||||| | ||||| |||||||||||||| ||||| ||||||||||||    
T  33294555 tttgagataccttataaaaacaatttatgacatgttaataagttgtttt 33294603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 535
Target Start/End: Original strand, 33645944 - 33646023
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| |||||| |||||| |||| |||||||||||||  | |||||||||||| ||||  | |||||||||| ||||||    
T  33645944 cttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagcttatgaaaaca 33646023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 601
Target Start/End: Original strand, 36484045 - 36484165
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagt-ttgccttgattttatcttgtg 580  Q
    ||||| |||||||  | |||||| |||| ||||| |||||| ||| | ||||||||| ||||||| |||||||| |   ||| ||| ||||| || ||||    
T  36484045 ataaggtgttttcaacatatttctataagctcttcaggataacttgtgaaaacaacttatagattctacgaaaaaaaaattgactttattttttcgtgtg 36484144  T
Q  581 ttatagaaatagctttttcat 601  Q
    ||||||||| ||||| |||||    
T  36484145 ttatagaaagagcttattcat 36484165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 36538005 - 36537957
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgtttt 493  Q
    ||||||| |||||||| |||||| |||||| ||||| ||||||||||||    
T  36538005 tttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 538
Target Start/End: Complemental strand, 39506008 - 39505960
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    ||||| |||||||||||||||||||  || ||||||||| |||||||||    
T  39506008 ttttcagcttatttccataaactctccagaatagcttatgaaaacaact 39505960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 456 - 641
Target Start/End: Complemental strand, 41817254 - 41817069
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||  |||||| ||||| |||| |||||||| |||||||||||||| ||||  ||||||| |||| |||| | || | | ||||||| ||||    
T  41817254 ttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaatagcttacacattatacaaaaa 41817155  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatcc 641  Q
     ||||||| || | ||| |||||||||||||||||||||| ||||| ||  |||||| |||| || |||||||||  |||||||||    
T  41817154 tagtttgcttttaatttctcttgtgttatagaaatagcttattcataagcatttatgttataagtggcaaaataagttgtttatcc 41817069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 506 - 594
Target Start/End: Complemental strand, 41407111 - 41407023
Alignment:
Q  506 ataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||||||| |||||||||||| ||||||||| ||||| ||||| ||| ||||||  ||| |||||||||||||||||||||||||||    
T  41407111 ataaactcttaaggatagcttatgaaaacaacttatagaatatacaaaagcagtttaactttattttatcttgtgttatagaaatagct 41407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 431 - 595
Target Start/End: Complemental strand, 787442 - 787278
Alignment:
Q  431 acttgtaacactgatttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat-a 529  Q
    |||||| |||||| |||| || ||||||||||||||  |||||| ||||  ||||| ||||||| |||||| |||||||||  | || ||||| |||| |    
T  787442 acttgtgacactg-tttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagatagtttatga 787344  T
Q  530 aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||  | ||||||| ||| ||||||  ||| ||| ||||||||||||||||||||||||||||    
T  787343 aaaacagattatagattttacaaaaacaagttgactttattttatcttgtgttatagaaatagctt 787278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 445 - 601
Target Start/End: Complemental strand, 39622048 - 39621894
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| ||||||||||||||| |||||| |  || |||| |||||||| |||||||||| ||| ||  |  ||||| ||||| |||||| || |||||    
T  39622048 tttgagagaacttatgaaaacaacttatgacaaattcataaattgttttcagcttatttccttaagcttgtccggataacttatgaaaacagcttataga 39621949  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||||||  ||| |||||| ||| ||||||| |||||||||||||||| ||| |||||    
T  39621948 ttatac--aaaaagtttgactttattttattttgtgttatagaaatatcttattcat 39621894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 453 - 562
Target Start/End: Complemental strand, 40158807 - 40158698
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  |||||| ||||||||||||||||||| ||||| || ||||| ||||  || ||| ||||| ||||||||| || | ||||||||    
T  40158807 aacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatacga 40158708  T
Q  553 aaacagtttg 562  Q
    ||||||||||    
T  40158707 aaacagtttg 40158698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 445 - 577
Target Start/End: Complemental strand, 35486014 - 35485882
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| ||||||  ||| ||| |||||| ||||| ||||| ||||||| ||| |||||||||  ||||| |||||||||||||||||||||| ||||     
T  35486014 tttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagc 35485915  T
Q  545 ttatacgaaaacagtttgccttgattttatctt 577  Q
    |||||   ||| |||||| ||| ||||||||||    
T  35485914 ttataatgaaatagtttgactttattttatctt 35485882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 593
Target Start/End: Original strand, 26857083 - 26857231
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    |||| |||||||||||||||||| |||||| | ||| | |   | ||||| ||||||||||| |||||||  | ||||||||| |||||   || ||| |    
T  26857083 tttgggaaaacttatgaaaacaacttatgacaggttcagagtctattttcagcttatttccacaaactctccaagatagcttacaaaaatggcttatata 26857182  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    ||||   ||||||||||| ||| ||||||||||||||||||||||||||    
T  26857183 ttatgtaaaaacagtttgacttcattttatcttgtgttatagaaatagc 26857231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 601
Target Start/End: Complemental strand, 4090373 - 4090290
Alignment:
Q  518 ggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    |||||||||||  |||||||| |||||||||||  ||||| |||| ||| ||||||||||||||||| |||||||||| |||||    
T  4090373 ggatagcttatgtaaacaacttatagattataccgaaacaatttgactttattttatcttgtgttatggaaatagcttattcat 4090290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 595
Target Start/End: Complemental strand, 43259894 - 43259781
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||| ||||||  |||||||||||||| ||||| | |||| || || |||||| ||  | |||||||| |||||  |||| ||| ||||||||||||||    
T  43259894 ataagctgtttttagcttatttccataagctcttcaagatacctaatgaaaacagcttgttgattatacaaaaactatttgactttattttatcttgtgt 43259795  T
Q  582 tatagaaatagctt 595  Q
    ||||||||||||||    
T  43259794 tatagaaatagctt 43259781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 503 - 591
Target Start/End: Complemental strand, 10143211 - 10143123
Alignment:
Q  503 tccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||||||||||||  | |||||||||| |||| |||| |||| |||||  ||||||||||| ||| |||||||||| |||||||||||||    
T  10143211 tccataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaata 10143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 593
Target Start/End: Original strand, 34054926 - 34055022
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    ||||||||  ||| |||| ||||||||||||| |||||| || |||   |||| | |||||||||||||| |||||||||| |||||||||||||||    
T  34054926 cttatttcactaagctctataggatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatcttttgttatagaaatagc 34055022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 571
Target Start/End: Complemental strand, 42420063 - 42419968
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattt 571  Q
    ||||| |||| |||||||| ||| |||||||||| || |  |||||||||||| |||| | || ||||||||||| ||||||||| ||||||||||    
T  42420063 atgttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaaatagcttatagattatacaaaaacagttcgccttgattt 42419968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 577
Target Start/End: Complemental strand, 43141931 - 43141836
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    |||||||||||||   |||||||||||||||||| |||||||||||| |||||| || |||| ||||| | ||||| |||| ||| | ||||||||    
T  43141931 ataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttactttatctt 43141836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 595
Target Start/End: Original strand, 656786 - 656900
Alignment:
Q  481 tataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    ||||||| ||||||  ||||||| ||||| ||||  | |||||||||| ||| ||||| | || ||||||||||||| ||||  |  |||||||||| ||    
T  656786 tataagtagttttcatcttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttg 656885  T
Q  581 ttatagaaatagctt 595  Q
    |||||||||||||||    
T  656886 ttatagaaatagctt 656900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 579
Target Start/End: Original strand, 7103492 - 7103590
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttat-aaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgt 579  Q
    ||||||||||||  |||||||| || ||||||| || |||||||||| ||||||| || |||| |||||  ||||||||||| ||| ||||||||||||    
T  7103492 ataagttgtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatcttgt 7103590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 17952746 - 17952824
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||| |||||| ||  ||| ||||| ||||| |||||| ||| |||||||||| |||||||||||||||||    
T  17952746 aggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagctt 17952824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 594
Target Start/End: Complemental strand, 33942228 - 33942099
Alignment:
Q  464 acaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgc 563  Q
    |||| |||||| ||||| ||||| ||||||| ||| |||| ||| | |||| || ||| |||||| ||||||||| |||| ||| | ||||||||||||     
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagtttga 33942129  T
Q  564 cttgattttatcttgtgttatagaaatagct 594  Q
    ||| |||||||||| || | |||||||||||    
T  33942128 ctttattttatcttttgat-tagaaatagct 33942099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 645
Target Start/End: Original strand, 35486390 - 35486536
Alignment:
Q  499 tatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagcttttt 598  Q
    ||||||||||| ||||  ||||||||||   |||||| || ||||||||||| ||||||||||| ||| | |||| ||| || ||||||||||||||  |    
T  35486390 tatttccataacctctccaggatagcttgcgaaaacagcttatagattatacaaaaacagtttgactttactttaccttctgctatagaaatagcttact 35486489  T
Q  599 cattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    ||| |  | || | ||||| | | |||||||| ||||||||||||||    
T  35486490 cataaacgcttctactataagctacaaaataagctgtttatccaaac 35486536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 43299451 - 43299525
Alignment:
Q  521 tagcttataaaaacaactaatagatt-atacgaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||| ||| |||||||||| ||||||| ||||||||    
T  43299451 tagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatcttctgttatataaatagct 43299525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 453 - 514
Target Start/End: Original strand, 28677640 - 28677701
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||||||||||||  |||||| || || |||||||||||||||||||||||||||| ||||    
T  28677640 aacttatgaaaacagcttatgacattttcataagttgttttcggcttatttccataagctct 28677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 595
Target Start/End: Complemental strand, 32694268 - 32694159
Alignment:
Q  486 gttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttata 585  Q
    ||||||||| ||||||||||| || || | |||||||||||||  |||||||| ||| ||||||  |||| ||| ||  || |||||||||| || ||||    
T  32694268 gttgttttcagcttatttccacaatctatctaggatagcttatgcaaacaacttataaattatataaaaatagtctgattttattttatcttttgatata 32694169  T
Q  586 gaaatagctt 595  Q
    ||||||||||    
T  32694168 gaaatagctt 32694159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 588
Target Start/End: Complemental strand, 33256827 - 33256694
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||  |||||| ||||| ||||  |||| || |||||||| ||||   |||| ||||| |||||| |||||  || |||| ||||| ||||    
T  33256827 cttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaactgcttatagtttatatgaaa 33256728  T
Q  555 acagtttgccttgattttatcttgtgttatagaa 588  Q
    |||||||| ||| |||||||||  ||||||||||    
T  33256727 acagtttgactttattttatctattgttatagaa 33256694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 566
Target Start/End: Original strand, 4085226 - 4085293
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgcctt 566  Q
    ||||||||||||||||| | ||||||||||| ||||||||| | ||||| ||| |||||||||||||||    
T  4085226 ttatttccataaactctgtgggatagcttatgaaaacaactta-agattgtacaaaaacagtttgcctt 4085293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 595
Target Start/End: Complemental strand, 28933910 - 28933771
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||| |||||  ||||| ||| | |||||||  |||||||| || | |||| ||||||||||||| ||||||| | |||  ||| | ||||    
T  28933910 cttatgaaaacaacttatggcatgttcata-gctgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttataacttaaatgaaa 28933812  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    | | ||||  ||||||||||||| ||||||| |||||||||    
T  28933811 ataatttgatttgattttatcttttgttatataaatagctt 28933771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 595
Target Start/End: Complemental strand, 5133858 - 5133719
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||| ||||||| |||||| ||| | ||||| |  |||| |||||||||||||| |||| |  |||| ||| | |||||| || |||  |||||  ||||    
T  5133858 ttataaaaacaacttatgacatggtcataagctactttcagcttatttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaa 5133759  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||  ||| |||||||||| |||||||||||||||||    
T  5133758 cagtttatctttattttatcttttgttatagaaatagctt 5133719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 455 - 538
Target Start/End: Original strand, 16785331 - 16785414
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    |||||| ||||| ||||||| | || |||||| ||||||| | |||| ||||||||||||| |||||| ||||| |||||||||    
T  16785331 cttatggaaacagtttatgagaagtctataagctgttttcagattatctccataaactcttcaggatatcttatgaaaacaact 16785414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 591
Target Start/End: Original strand, 22681189 - 22681304
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc 575  Q
    ||||| ||||| ||||||  ||||||||||||||  ||| |||||||| |||| |||||| || |||| ||||| ||||||| |||| |||  |||||||    
T  22681189 atgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatc 22681288  T
Q  576 ttgtgttatagaaata 591  Q
    || |||| || |||||    
T  22681289 ttttgttttaaaaata 22681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 595
Target Start/End: Original strand, 23143030 - 23143101
Alignment:
Q  524 cttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| |||||||||||||| ||||| ||||||| ||||  ||||||||||||| ||||| | |||||||||    
T  23143030 cttatgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagctt 23143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 595
Target Start/End: Original strand, 23554820 - 23554891
Alignment:
Q  524 cttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| |||||||||||||| ||||| ||||||| ||||  ||||||||||||| ||||| | |||||||||    
T  23554820 cttatgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagctt 23554891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 591
Target Start/End: Original strand, 42817360 - 42817495
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||| ||| |  |||||  |||||||||||  ||||| |||||||| ||||| || ||||||||| ||||||  | ||   ||||| |||||    
T  42817360 ttatgaaaacaacttacggcatgttcttaagttgtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaa 42817459  T
Q  556 cagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||| ||| ||| |||||||||| || ||||||||||    
T  42817460 cagcttgacttcattttatcttttggtatagaaata 42817495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 45314967 - 45314900
Alignment:
Q  443 gatttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaa 510  Q
    ||||||||| |||||||| |||||| |||||| || |||||||||||||||| | |||||| ||||||    
T  45314967 gatttgagagaacttatgtaaacaacttatgacatatttataagttgttttcagtttattttcataaa 45314900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 589
Target Start/End: Complemental strand, 6988170 - 6988068
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatag 586  Q
    ||||||||  |||||||| |||||||||| | |||||||||| ||||||||| |||  |  || ||||| | |||| ||| |||||||||| ||||||||    
T  6988170 ttgttttcatcttatttctataaactcttcaagatagcttatgaaaacaacttataactagtaagaaaataatttgactttattttatcttttgttatag 6988071  T
Q  587 aaa 589  Q
    |||    
T  6988070 aaa 6988068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 485 - 591
Target Start/End: Original strand, 13630294 - 13630400
Alignment:
Q  485 agttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttat 584  Q
    ||||||||||  ||||||  ||||||||||  ||||||| |||  ||||||||| || ||||||| |||||||||||| ||| || ||||||| || ||     
T  13630294 agttgttttcaacttattgtcataaactctcaaggatagattaggaaaacaacttattgattatatgaaaacagtttgactttatcttatcttttgatag 13630393  T
Q  585 agaaata 591  Q
    |||||||    
T  13630394 agaaata 13630400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 595
Target Start/End: Original strand, 29316772 - 29316898
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| ||||| ||||||| ||||| ||||||||||||||  |||  | ||||||| || |||||| || |||||||||  ||||||| |||  | | |    
T  29316772 ttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaatttaacctta 29316871  T
Q  569 ttttatcttgtgttatagaaatagctt 595  Q
    ||||||||| ||||| ||| |||||||    
T  29316872 ttttatcttctgttaaagatatagctt 29316898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 611
Target Start/End: Original strand, 43530092 - 43530250
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  |||||| ||||| | ||| | |||||  ||||||||||||  ||  ||||| || ||||| | |||  || || || ||||||     
T  43530092 aacttatgaaaacagattatgacatgttcacaagctattttcaacttatttccataggctgattaggttaacttatgacaactgcttattgagtatacgg 43530191  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttat 611  Q
    || ||||||| ||| ||||||||||||  |||||||||||||| ||||| |||| ||||    
T  43530192 aagcagtttgactttattttatcttgtcctatagaaatagcttattcataagtgcttat 43530250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 680589 - 680488
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||  |||||| ||||||||||  ||||||| |||||||| || ||  |||| | |||||||||| |||| | || |||| |||||||||||    
T  680589 ttatgaaaacagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaa 680490  T
Q  556 ca 557  Q
    ||    
T  680489 ca 680488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 592
Target Start/End: Original strand, 1742015 - 1742152
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||| |||||| |||||| ||||  ||||| | | |||  ||||||||||||||||||| | ||||| |||| |||||| || |||  |||||   ||    
T  1742015 cttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacagcttatatcttatatataa 1742114  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatag 592  Q
    | |||||| ||| ||||||| || ||||||||||||||    
T  1742115 agagtttgacttcattttatattttgttatagaaatag 1742152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 539
Target Start/End: Complemental strand, 1810716 - 1810667
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaacta 539  Q
    ||||| |||||||| ||||||||||| | |||||||||||||||||||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaacaacta 1810667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 645
Target Start/End: Original strand, 28039316 - 28039505
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||| ||||||  |||| ||||| ||||||| ||||||||||||||  | |  | || ||||||| ||||   || |||| ||||| |||||    
T  28039316 ttatgaaaacaagttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaa 28039415  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    || || | ||| |||||||||||||| |   ||||||||| |||||  | | ||||||||||   |||||| |||  |||||||||||||    
T  28039416 caattggactttattttatcttgtgtaaccaaaatagcttattcatatgcgcttatgctataaactgcaaattaagttgtttatccaaac 28039505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 32821889 - 32821816
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| |||||| ||||  ||||| ||||||| | ||||||| |||| |||||||||||||||||| ||||||    
T  32821889 aaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaaca 32821816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 582
Target Start/End: Original strand, 37292380 - 37292457
Alignment:
Q  505 cataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgtt 582  Q
    ||||||||||  |||||||||||  |||||||||||||| ||||| ||||| |||||  ||| |||||||||| ||||    
T  37292380 cataaactctccaggatagcttaagaaaacaactaatagcttatatgaaaatagttttactttattttatcttttgtt 37292457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 1647325 - 1647249
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttata 529  Q
    ||||||||||||||  |||||| ||| | ||||| ||||||| |||||||||||||| |||| ||  ||||||||||    
T  1647325 aacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctctataatagcttata 1647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 535
Target Start/End: Original strand, 10198479 - 10198543
Alignment:
Q  471 atgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||| ||||| ||||| |||| || |||||||||||||| |||| |||||||| |||||||||||    
T  10198479 atgacatgttcataagctgttgtcagcttatttccataatctctctaggatagattataaaaaca 10198543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 596
Target Start/End: Original strand, 31740019 - 31740083
Alignment:
Q  532 aacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagcttt 596  Q
    ||||||| |||| ||||| ||||| |||||| ||| ||||||||||  |||||||||||||||||    
T  31740019 aacaacttatagcttatatgaaaatagtttgactttattttatctttagttatagaaatagcttt 31740083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 597
Target Start/End: Complemental strand, 33192190 - 33192138
Alignment:
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    ||||| |||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  33192190 ttatatgaaaacagtttgactttattttatcttatgttatagaaatagttttt 33192138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 562
Target Start/End: Original strand, 3059290 - 3059365
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaact-aatagattatacgaaaacagtttg 562  Q
    ||||||| | ||||||||||||||||| ||| ||||||||| ||||||||| |  || ||||| ||||||||||||    
T  3059290 tgttttcagtttatttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttg 3059365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 637
Target Start/End: Original strand, 6887306 - 6887426
Alignment:
Q  516 taggatagcttataaaaacaactaataga-ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgct 614  Q
    ||||||| ||||| ||||||||| ||||  |||||| ||| | ||||| ||| || |||||||||||||  |||||||||| ||||| || | ||||  |    
T  6887306 taggataacttatgaaaacaacttatagggttatacaaaagccgtttgactttatcttatcttgtgtta--gaaatagcttattcataagcgcttattat 6887403  T
Q  615 atatgttgcaaaataaactgttt 637  Q
    ||| | |||||||||||||||||    
T  6887404 ataagctgcaaaataaactgttt 6887426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 590
Target Start/End: Complemental strand, 10285947 - 10285813
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||||||| || |||||| ||||  ||||| |||||||  |||||||||||||  ||| || | ||||||||  |||| ||| |||| ||||| ||||    
T  10285947 cttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatatgaaa 10285848  T
Q  555 acagtttgccttgattttatcttgtgttatagaaat 590  Q
     ||||||| ||| ||||| |||| || |||||||||    
T  10285847 ccagtttgactt-attttttcttttggtatagaaat 10285813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 592
Target Start/End: Complemental strand, 13866914 - 13866839
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    ||||||||| || |||| | || ||||||||||  ||||||||||| ||| |||||||||| || |||||||||||    
T  13866914 aggatagctaatgaaaagagcttatagattatataaaaacagtttgacttaattttatcttttgctatagaaatag 13866839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 595
Target Start/End: Complemental strand, 25609810 - 25609743
Alignment:
Q  528 taaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||||| |||| ||||||||||| |  ||| ||| |||||||||| | |||||||||||||||    
T  25609810 taaaaacaacttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagctt 25609743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 589
Target Start/End: Complemental strand, 27288694 - 27288586
Alignment:
Q  479 tttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttg 578  Q
    |||||||||||||||| |||||||||| ||||||||  | |||| ||||| ||||||  | |||| |||||   ||||||||||  || ||||||||||     
T  27288694 tttataagttgttttcagcttatttccgtaaactctacatgataacttatgaaaacagatcatagcttata--taaacagtttgattttattttatcttt 27288597  T
Q  579 tgttatagaaa 589  Q
    | |||||||||    
T  27288596 tattatagaaa 27288586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 591
Target Start/End: Original strand, 40808268 - 40808319
Alignment:
Q  540 atagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||||||||||| |||||| |||| ||| |||||||||||||| |||||||||    
T  40808268 atagattatacaaaaacaatttgactttattttatcttgtgtaatagaaata 40808319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 538
Target Start/End: Original strand, 43065433 - 43065516
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    ||||||||||||| |||||| ||||  |||| |||||||| ||||||||| |||| ||||  | |||| ||||| |||||||||    
T  43065433 cttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaact 43065516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 591
Target Start/End: Original strand, 44439408 - 44439479
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||||||||||||||||| | |||| |||||| ||||||||||  ||| ||||||| || |||||| ||||||    
T  44439408 atagcttataaaaacaatttatagcttatacaaaaacagtttaactttattttatattttgttatggaaata 44439479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 5043607 - 5043665
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    |||||||||| |||||||||  ||| ||||| |||||||||||| ||| ||||||||||    
T  5043607 gatagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatctt 5043665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 11488362 - 11488291
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||||||||| ||||||  || | ||||||||||||| |||||||| ||||| ||||  ||||||||||||    
T  11488362 cttatgaaaacaacttatga--tggtcataagttgttttcagcttatttgcataatctctccaggatagcttat 11488291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 41032959 - 41032997
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactct 514  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  41032959 atgtctataagttgttttcagcttatttccataaactct 41032997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 532
Target Start/End: Original strand, 41809235 - 41809305
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaa 532  Q
    |||||| |||||| ||||| ||||||||||||  |||||||||||||| || | || |||||||| |||||    
T  41809235 aaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagcttgtaaaa 41809305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 601
Target Start/End: Original strand, 626243 - 626340
Alignment:
Q  504 ccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    |||||| ||||  ||||| |||||| |||| |||| | ||||| ||| ||| || |||| ||  ||||||||||||||| |||||||||||| |||||    
T  626243 ccataagctctacaggattgcttattaaaataacttagagattgtacaaaaccattttgactatattttatcttgtgttctagaaatagcttattcat 626340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 1741529 - 1741574
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaa 532  Q
    |||||||| |||||||||||||||||||| ||||||  ||||||||    
T  1741529 ttgttttcagcttatttccataaactcttcaggataaattataaaa 1741574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 488 - 529
Target Start/End: Complemental strand, 3973589 - 3973548
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttata 529  Q
    ||||||| ||||||||||||||||||  ||||||||||||||    
T  3973589 tgttttcagcttatttccataaactccctaggatagcttata 3973548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 554
Target Start/End: Original strand, 35378513 - 35378614
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  | ||||  |||| ||||||| ||||| |||||||| ||||| || |  | ||| |||||  |||||| ||||||||||||||||    
T  35378513 aacttatgaaaacagctgatgacttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaacagctaatagattatacga 35378612  T
Q  553 aa 554  Q
    ||    
T  35378613 aa 35378614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 592
Target Start/End: Complemental strand, 37053617 - 37053544
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    ||||||| || |||| |||| |||  ||||| |||||||||||| ||| ||||||| || ||||||||||||||    
T  37053617 gatagctaatgaaaaaaacttataacttatatgaaaacagtttgactttattttattttctgttatagaaatag 37053544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 595
Target Start/End: Complemental strand, 42907371 - 42907306
Alignment:
Q  530 aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||| |||| ||| ||||||||| |||  ||| ||||| |||| |||||||||||||||||    
T  42907371 aaaacaacttatagcttaaacgaaaacaatttaactttattttttcttctgttatagaaatagctt 42907306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 555
Target Start/End: Original strand, 43985021 - 43985086
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||| |||||||| ||||| ||||| | |||||||||| ||||||||| |||  |||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaacaacttataatttatacgaaaa 43985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 533
Target Start/End: Complemental strand, 44443395 - 44443330
Alignment:
Q  468 tttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    ||||||||||||| ||||||||||||| |||||||| ||||  ||||  | |||||||||| ||||    
T  44443395 tttatgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaa 44443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 535
Target Start/End: Original strand, 3067362 - 3067442
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||  |||| | |||| ||||||  |||||  |||||||| ||||||||||| | |||||||||| ||||||    
T  3067362 cttatgaaaacagcttataatatgtatataagccgtttttagcttattttcataaactcttcaagatagcttatgaaaaca 3067442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 594
Target Start/End: Original strand, 3235394 - 3235504
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||| ||||||| ||||||||||||||||| || | |||||  ||| |||||| || |||| ||||| | |||||||||| ||| ||||| || | |||    
T  3235394 ataagctgttttcagcttatttccataaacttttcaagatagtatatgaaaacagcttatagtttatatg-aaacagtttgactttatttt-tcatttgt 3235491  T
Q  582 tatagaaatagct 594  Q
    |||| ||||||||    
T  3235492 tataaaaatagct 3235504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 595
Target Start/End: Complemental strand, 14209280 - 14209224
Alignment:
Q  539 aatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| ||||| ||||||||||||  || |||||||||| |||||| ||||||||||    
T  14209280 aatagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagctt 14209224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 18962064 - 18962160
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||||||||  ||||  | |||||||||| |||| |  | |||| ||||| |||||||||||  ||| |||||||||| ||||||| ||||||||    
T  18962064 ttatttccatagtctctccatgatagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagct 18962160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 497 - 593
Target Start/End: Complemental strand, 29300690 - 29300594
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    ||||||||||||| |  || |||||||||||| ||||||||| |||  ||| | ||||||| ||  |||| |||||||||| | || ||||||||||    
T  29300690 cttatttccataagcatttaaggatagcttatgaaaacaacttataacttacatgaaaacaattcacctttattttatcttttattgtagaaatagc 29300594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 557
Target Start/End: Original strand, 29628748 - 29628828
Alignment:
Q  477 tgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaaca 557  Q
    |||| |||| |||||||| ||||||||||||||| | |  | |||||||||| | ||||||| |||| |||||| ||||||    
T  29628748 tgttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagcttatacaaaaaca 29628828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 514
Target Start/End: Original strand, 31228827 - 31228879
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||||||||||| |||| |||||| ||||||  | |||||||||||||||||    
T  31228827 aaacaatttatgacatgtatataagctgtttttaggttatttccataaactct 31228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 32098387 - 32098431
Alignment:
Q  551 gaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||| |||| ||| |||||||||| |||||||||||||||||    
T  32098387 gaaaacactttgactttattttatcttttgttatagaaatagctt 32098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 520 - 600
Target Start/End: Original strand, 33931618 - 33931698
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttca 600  Q
    ||||||||| |||||| || |||| |||||| |||||| | || | | ||||||||| |||| ||||||||||||| ||||    
T  33931618 atagcttatgaaaacagcttatagcttatacaaaaacaatctgaccttattttatctagtgtaatagaaatagcttattca 33931698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 453 - 557
Target Start/End: Complemental strand, 33941998 - 33941894
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||| |||||| | ||| ||||| || ||||  ||||||  ||||||||||  | |||||||||| ||||||| | |||  |||||| |    
T  33941998 aacttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttatacaa 33941899  T
Q  553 aaaca 557  Q
    |||||    
T  33941898 aaaca 33941894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 34102043 - 34101983
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaaca-gtttgccttgattttatct 576  Q
    ||||||||||||||||||||||||||  |||||| |||| | ||||| ||| |||||||||    
T  34102043 aggatagcttataaaaacaactaataacttatacaaaaaaacgtttgactttattttatct 34101983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 535
Target Start/End: Original strand, 35378999 - 35379079
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||  | ||||  |||| ||||||||||||| |||||||| ||||| ||||  | |||||||||| ||||||    
T  35378999 cttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 595
Target Start/End: Original strand, 38239638 - 38239674
Alignment:
Q  559 tttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||| |||||||||||||| |||||||||||||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagctt 38239674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 509
Target Start/End: Complemental strand, 43569809 - 43569773
Alignment:
Q  473 gaaatgtttataagttgttttcggcttatttccataa 509  Q
    |||||||| |||||||||||| |||||||||||||||    
T  43569809 gaaatgttgataagttgtttttggcttatttccataa 43569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 459 - 595
Target Start/End: Original strand, 44438826 - 44438962
Alignment:
Q  459 tgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacag 558  Q
    ||||||||  |||||| ||||| ||||  ||||||| ||||||||||| ||  |||  |||||| ||||| || ||| || || | || ||| |||||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaagacagcttatggcttgtacaaaaacag 44438925  T
Q  559 tttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||| ||| |||||||||| || ||  ||||||||||    
T  44438926 tttgactttattttatcttttgctacggaaatagctt 44438962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 453 - 509
Target Start/End: Original strand, 44606091 - 44606147
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||||||||||||| |||||| ||||  ||||||||||||| ||| |||| |||||    
T  44606091 aacttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataa 44606147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 448 - 595
Target Start/End: Complemental strand, 17368770 - 17368623
Alignment:
Q  448 gagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagatta 547  Q
    |||| ||||||||||||||| |||||| ||||| ||| |  |||||| |||||||||||||| ||||  | |||||||||| ||||||||| ||||||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagatta 17368671  T
Q  548 tacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
     || ||||||||||| ||| |||| ||  |||||||| ||||||||||    
T  17368670 cacaaaaacagtttgacttcatttaatactgtgttattgaaatagctt 17368623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 597
Target Start/End: Original strand, 37588333 - 37588485
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| | |||||||| ||||  ||||||||||| ||||| ||||||| |||||||||||||| ||||  || ||| ||||| ||||||||| ||||     
T  37588333 tttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagc 37588432  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    ||||| ||||||  ||||  ||||||||||||| | ||||||||||| |||||    
T  37588433 ttatatgaaaactttttgatttgattttatcttttattatagaaataactttt 37588485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 462 - 577
Target Start/End: Original strand, 10272421 - 10272536
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||||| |||| | |||||||||||| |||||||| ||||||||||  | ||| |||||| ||||||||| |||| ||||||||||||| |||    
T  10272421 aaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaattt 10272520  T
Q  562 gccttgattttatctt 577  Q
    | ||| ||||||||||    
T  10272521 gacttaattttatctt 10272536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 14295593 - 14295454
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||  |||||| ||||  ||||| ||||||| ||||| ||| | || ||||  |||||||||||  |||||| || |||| ||||| ||||    
T  14295593 cttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttatatgaaa 14295494  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||||| ||| |||||||||| ||||||||||||||||    
T  14295493 acagtttgactttattttatcttttgttatagaaatagct 14295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 456 - 595
Target Start/End: Complemental strand, 16889821 - 16889682
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||  ||||   |||| |||||||||||||| | ||||||||||||||||| ||| ||||||||| |||||| || |||| || ||  ||||    
T  16889821 ttatgaaaacagcttatactatgtctataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctataaaaa 16889722  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||| ||| | |||||||| |||||| ||||||||||    
T  16889721 cagtttgacttaagtttatcttttgttatggaaatagctt 16889682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 445 - 597
Target Start/End: Original strand, 37526172 - 37526324
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| | |||||||| ||||  ||||| ||||| ||||| ||||||| |||||||||||||| ||||  || | | ||||| ||||||||| ||||     
T  37526172 tttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagc 37526271  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    ||||| ||||||  ||||  ||||||||||||| | ||||||||||| |||||    
T  37526272 ttatatgaaaactttttgatttgattttatcttttattatagaaataactttt 37526324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 471 - 549
Target Start/End: Original strand, 2880546 - 2880624
Alignment:
Q  471 atgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    |||| ||||| ||||| ||||||| ||||||||||||||||||||  | ||||||||||||||||||| ||||||||||    
T  2880546 atgatatgttcataaggtgttttcagcttatttccataaactcttctgaatagcttataaaaacaacttatagattata 2880624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 455 - 597
Target Start/End: Original strand, 37794681 - 37794822
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||| |||||| ||||| ||||| ||||||  ||||||||| |||| |||| |||||||||| || |||| ||   |||| ||||||| ||    
T  37794681 cttatgaaaacaacttatgacatgttcataagctgttttgagcttatttcgataa-ctctataggatagctcatgaaaataatctatagcttatacgtaa 37794779  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    ||||||||  || |||||||||| | | |||||||||||||||    
T  37794780 acagtttgatttcattttatcttttataatagaaatagctttt 37794822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 483 - 592
Target Start/End: Original strand, 28586777 - 28586886
Alignment:
Q  483 taagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgtt 582  Q
    |||| ||||||| ||||||||| |||| |||| ||||||||||  | |||||| || |||  ||||| |||||||||||| ||| |||||||||| ||||    
T  28586777 taagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactttattttatcttttgtt 28586876  T
Q  583 atagaaatag 592  Q
    ||||||||||    
T  28586877 atagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 447 - 645
Target Start/End: Original strand, 10125693 - 10125892
Alignment:
Q  447 tgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact-aatagat 545  Q
    ||||| |||||||| |||||| |||||| ||||| ||||| ||||||| |||||||| ||||| ||||  | | || ||||| |||| |||| ||||| |    
T  10125693 tgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttatgaaaataacttaatagtt 10125792  T
Q  546 tatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    |||| ||||  | ||   ||| || |||||||||| |||||||||||||| ||||| |    ||||||||||  |||||| |||| ||||||||||||||    
T  10125793 tataagaaaggaattcaactttatcttatcttgtgatatagaaatagcttattcataatcagttatgctataacttgcaatataagctgtttatccaaac 10125892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 453 - 595
Target Start/End: Complemental strand, 7674737 - 7674595
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||||||| |||||| |||||| ||||||||||| ||||||| |||||||| || ||| |||  | |||||||||| ||||||  | || | ||||| ||    
T  7674737 aacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataaga 7674638  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| |||   || |||||||||| || ||||||||||||||    
T  7674637 aaacaatttaaatttattttatcttttggtatagaaatagctt 7674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 595
Target Start/End: Original strand, 12459986 - 12460123
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaac 556  Q
    ||||||||||| |||||| ||||| ||| |||||||| ||||||||| ||||| ||||  | |||||||| | || |||||| |||| ||||  ||||||    
T  12459986 tatgaaaacaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaagacaacttatagtttatttgaaaac 12460085  T
Q  557 agtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    | | |  ||| |||||||||| |||||||||||||||||    
T  12460086 aatataactt-attttatcttttgttatagaaatagctt 12460123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 453 - 630
Target Start/End: Complemental strand, 9106911 - 9106737
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgttt-ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacg 551  Q
    ||||||||||||||| |||| |  | ||| ||||| ||||||| |||||||||||||| ||    |||||| ||||| |||| | || |||||||||||     
T  9106911 aacttatgaaaacaacttataatgtatttcataagctgttttcagcttatttccataagcttagcaggataacttatgaaaatagcttatagattataca 9106812  T
Q  552 aaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataa 630  Q
    ||||||||||| |||    |||||||| ||||||||||| |||| ||||| | || ||||||| || | ||||||||||    
T  9106811 aaaacagtttgactt----ttatcttgggttatagaaattgcttattcataaatgcttatgctttaagctgcaaaataa 9106737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 591
Target Start/End: Original strand, 18704026 - 18704154
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||| | |||| |||||||||||||| ||||||||||||||  |||||   ||||||||| ||||||||| |||| |||||  |||| || ||    
T  18704026 aaacaacttataacatgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaatagctt 18704125  T
Q  562 gccttgattttatcttgtgttatagaaata 591  Q
    | ||| | |||||||| |||||||||||||    
T  18704126 gacttta-tttatcttttgttatagaaata 18704154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 597
Target Start/End: Original strand, 37690609 - 37690762
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagc-ttataaaaacaactaatag 543  Q
    ||||||| | |||||||| ||||  ||||| ||||| ||||| ||||||| |||||||||||||| ||||  |  ||| | |||| ||||||||| ||||    
T  37690609 tttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatag 37690708  T
Q  544 attatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
     ||||| ||||||  ||||  ||||||||||||| | ||||||||||| |||||    
T  37690709 cttatatgaaaactttttgatttgattttatcttttattatagaaataactttt 37690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 455 - 554
Target Start/End: Complemental strand, 10907465 - 10907367
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||||| |||||  ||||  ||||| ||||||||||||||||||| ||| || ||| |||| |||||||||||| || |||||||||| ||||    
T  10907465 cttatgaaaacaacttatgtcatgtcaataagctgttttcggcttatttccacaaattcctta-gataacttataaaaacagcttatagattatatgaaa 10907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 584
Target Start/End: Original strand, 15003495 - 15003626
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||||| | |||||| ||| || |||||  |||||||||||||  |||||||||||| |||| | ||||||||||| ||||| ||| |||| ||||| ||    
T  15003495 aacttaaggaaacaacttacgacatgttcgtaagttgttttcgatttatttccataagctctcttggatagcttatgaaaaccacttatagcttatatga 15003594  T
Q  553 aaacagtttgccttgattttatcttgtgttat 584  Q
    | | ||||||  || |||||||||| ||||||    
T  15003595 agagagtttgattttattttatcttttgttat 15003626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 453 - 538
Target Start/End: Complemental strand, 2468521 - 2468435
Alignment:
Q  453 aacttatgaaaacaattt-atgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    |||||||| ||||||||| |||| ||||  ||||| ||||||  ||||| |||||||||||||| ||||||||||||||||| ||||    
T  2468521 aacttatggaaacaattttatgacatgtccataagctgttttgagcttacttccataaactcttcaggatagcttataaaaagaact 2468435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 549
Target Start/End: Complemental strand, 10391428 - 10391334
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaa-ctctttaggatagcttataaaaacaactaatagattata 549  Q
    |||| |||||| ||||||| |||| ||| ||||||||||  ||||||||| |||| |||| ||||||||||||||||||||| | |||| |||||    
T  10391428 ttataaaaacactttatgacatgtctattagttgttttcaacttatttccttaaaactctctaggatagcttataaaaacaaattatagcttata 10391334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 453 - 514
Target Start/End: Original strand, 499712 - 499773
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||||||||||||  |||||| ||||| | ||||||||||| |||||||||||||||||||    
T  499712 aacttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttccataaactct 499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 594
Target Start/End: Complemental strand, 4855771 - 4855646
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| ||||| | ||| |||||||||||||||||  ||| |||||| |||||| |||| ||||||||| |||  ||||| || |||| |||  ||| |    
T  4855771 ttatgacatgttcagaagctgttttcggcttatttctgtaagctctttgggatagtttatgaaaacaacttataacttatatgataacaatttaacttta 4855672  T
Q  569 ttttatcttgtgttatagaaatagct 594  Q
    |||||| || ||||||| ||||||||    
T  4855671 ttttattttttgttataaaaatagct 4855646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 11707153 - 11707062
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||||| ||||||| |||| |  |||||| ||||||||||||||||||| |||||||| || || ||||  | |||||||||| ||||||    
T  11707153 atttgagagaacttatcaaaatagattatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaaca 11707062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 540 - 591
Target Start/End: Original strand, 29116998 - 29117049
Alignment:
Q  540 atagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    |||| |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 536
Target Start/End: Original strand, 37611188 - 37611279
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaa 536  Q
    ||||||| | ||||||||||||| || ||| ||||| ||||| ||||||| | |||||||||||| ||||  | |||||||||| |||||||    
T  37611188 tttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 536
Target Start/End: Original strand, 37787918 - 37788009
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaa 536  Q
    ||||||| | ||||||||||||| || ||| ||||| ||||| ||||||| | |||||||||||| ||||  | |||||||||| |||||||    
T  37787918 tttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 555
Target Start/End: Complemental strand, 2568747 - 2568645
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  |||||| || || ||||||| ||||  |||||||| ||| | ||||  | |||||||||| ||||||||| |||| ||||||||    
T  2568747 aacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacga 2568648  T
Q  553 aaa 555  Q
    |||    
T  2568647 aaa 2568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 617
Target Start/End: Original strand, 14599353 - 14599450
Alignment:
Q  522 agcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc--ttgtgttatagaaatagctttttcattagtgtttatgctata 617  Q
    |||||||  |||||||| |||  ||||| |||||||||||| ||| ||||||||  || |||||||||||||||||   ||| |||||||||||||||    
T  14599353 agcttatcgaaacaacttataacttatatgaaaacagtttgacttaattttatcagttttgttatagaaatagcttaaacataagtgtttatgctata 14599450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 543
Target Start/End: Complemental strand, 17827613 - 17827523
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||||| |||||||| ||||||||||||  ||| || ||||| |||||||| | ||| |||| || ||||||||| |||||||||| ||||    
T  17827613 aacttaggaaaacaacttatgaaatgttcgtaaattattttcagcttattttcgtaacctctctaagatagcttacaaaaacaacttatag 17827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 595
Target Start/End: Complemental strand, 29588931 - 29588827
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaa 589  Q
    ||||| |||||||||||||||||||| |  ||||||||  ||||||  | |||| ||||| ||||||| ||| | || ||||||| || |||||||||||    
T  29588931 ttttcagcttatttccataaactcttcaacatagcttacgaaaacactttatagcttatatgaaaacaattttcatt-attttatattttgttatagaaa 29588833  T
Q  590 tagctt 595  Q
    ||||||    
T  29588832 tagctt 29588827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 592
Target Start/End: Complemental strand, 32172740 - 32172603
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||| |||||| |||||| ||||  |||||   ||||| |||||||||||| |  |||| | |||||||||| |||||| || |||| ||||| | ||    
T  32172740 cttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatagcttatatgtaa 32172641  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||  ||| ||| |||||||||| |||| |||||||||    
T  32172640 acaacttgacttcattttatcttttgttgtagaaatag 32172603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 595
Target Start/End: Complemental strand, 36539790 - 36539693
Alignment:
Q  498 ttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| ||| || ||||| || ||| ||||||||||||||| |||| ||||| |||||||| ||| ||| |||||||||| || || | |||||||||    
T  36539790 ttattaccaaaagctcttcagaataacttataaaaacaacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagctt 36539693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 601
Target Start/End: Original strand, 42569048 - 42569109
Alignment:
Q  540 atagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    |||| ||||||||||||| || | ||| |||||||||| || ||||||||||||||||||||    
T  42569048 atagcttatacgaaaacaattagactttattttatcttttgctatagaaatagctttttcat 42569109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 589
Target Start/End: Original strand, 12595749 - 12595857
Alignment:
Q  481 tataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    |||||| |||||||  || ||||| |||| ||||||| | |||||||| ||| || || |||| ||||| ||||||| |||  ||| |||||||||| ||    
T  12595749 tataagctgttttcaactgatttctataagctctttaaggtagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttg 12595848  T
Q  581 ttatagaaa 589  Q
    |||||||||    
T  12595849 ttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 528
Target Start/End: Original strand, 38104865 - 38104913
Alignment:
Q  480 ttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||||||||||| |||||||||||||| |||| || ||||||||||    
T  38104865 ttataagttgttttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 601
Target Start/End: Original strand, 912695 - 912778
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagttt-gccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||||| |||||||||||||| || | ||||| ||||||| ||| | ||| ||||||| |||||||||||||||| ||| |||||    
T  912695 gatagtttataaaaacaacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcat 912778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 535
Target Start/End: Complemental strand, 36638833 - 36638754
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||  | ||||| ||||| ||||| | ||||| |||||||||||||| |||| ||||||| ||||| ||||||    
T  36638833 ttatgaaaactgtgtatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaaca 36638754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 595
Target Start/End: Original strand, 38831481 - 38831579
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||| | || | || ||||||||| |||||||||| ||   |||||||||||||||||| ||| |||||||||| | | | |||||||||||    
T  38831481 gcttatttccatcagctatctatgatagctta-aaaaacaacttatcatttatacgaaaacagtttgactttattttatcttttataacagaaatagctt 38831579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 555
Target Start/End: Original strand, 5946704 - 5946762
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||||||||||| || |   |||||||||||||||||||||||||| |||| ||||||    
T  5946704 cttatttccataagctttcctggatagcttataaaaacaactaatagcttattcgaaaa 5946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 533
Target Start/End: Original strand, 32408603 - 32408653
Alignment:
Q  483 taagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    ||||||| |||| |||||||||||||| ||||| |||||||||||| ||||    
T  32408603 taagttggtttctgcttatttccataagctcttcaggatagcttatgaaaa 32408653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 3237153 - 3237100
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||| ||| || ||||| ||||| |||||||||||||||||| ||||||    
T  3237153 ataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaaca 3237100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 597
Target Start/End: Original strand, 18543210 - 18543322
Alignment:
Q  485 agttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaac-agtttgccttgattttatcttgtgtta 583  Q
    |||||||||| ||||||||| |||| ||||  |||||||||||| ||||||||| |||  |||||  ||||| |||||| ||| |||| || || ||| |    
T  18543210 agttgttttcagcttatttc-ataagctctccaggatagcttatgaaaacaacttatatcttatataaaaacaagtttgactttatttaatattttgtga 18543308  T
Q  584 tagaaatagctttt 597  Q
    || |||||||||||    
T  18543309 tacaaatagctttt 18543322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 28413281 - 28413326
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||||||    
T  28413281 ttatggaatgttcataagctgttttcagcttatttccataaactct 28413326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 547
Target Start/End: Complemental strand, 30217142 - 30217077
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagatta 547  Q
    |||||||||||| || |||||||||||| ||||  |||||||||||| ||| || || ||||||||    
T  30217142 ataagttgttttaggtttatttccataagctctccaggatagcttatgaaagcagcttatagatta 30217077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 594
Target Start/End: Original strand, 36542307 - 36542404
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||||||| || |||| |||||||||||||  || || || |||| ||||| || |||||||||  |||||  |||| | ||||||||||||||||    
T  36542307 cttatttccacaagctctctaggatagcttatggaatcagcttatagcttatatgagaacagtttgatttgataatatcgtttgttatagaaatagct 36542404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 469 - 529
Target Start/End: Complemental strand, 12521601 - 12521541
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttata 529  Q
    |||||| ||||| ||||| ||||||| |||||||||||||| ||||| |  ||||||||||    
T  12521601 ttatgatatgttcataagctgttttcagcttatttccataagctcttcaaaatagcttata 12521541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 28578883 - 28578839
Alignment:
Q  551 gaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| ||| ||| |||||||||| |||||||||||||||||    
T  28578883 gaaaacagcttgactttattttatcttatgttatagaaatagctt 28578839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 535 - 591
Target Start/End: Original strand, 35135725 - 35135781
Alignment:
Q  535 aactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    |||| |||| ||||| ||||| |||||| ||| |||||||||| |||||||||||||    
T  35135725 aacttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaata 35135781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 491 - 535
Target Start/End: Original strand, 36774726 - 36774770
Alignment:
Q  491 tttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||| |||||||||||||| ||||  |||||||||||||||||||    
T  36774726 tttcagcttatttccataagctctccaggatagcttataaaaaca 36774770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 451 - 595
Target Start/End: Original strand, 20936208 - 20936352
Alignment:
Q  451 aaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatac 550  Q
    ||||||||||||||||| |||||| ||||| ||||| |||||||  ||||||||||||| ||||  |||||||  ||| ||||||||  ||||||||||     
T  20936208 aaaacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaacaacctatagattatat 20936307  T
Q  551 gaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
     |||||| |||| ||| |||||| |||| |||||||| |||||||    
T  20936308 aaaaacaatttgacttcattttaccttgcgttatagatatagctt 20936352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 591
Target Start/End: Complemental strand, 49219199 - 49219090
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||||||||||| |||||||||||||| ||||||| ||||| |||| ||||||||| |||| ||||| ||||| | |||| ||| ||||||| || |||    
T  49219199 ataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgt 49219100  T
Q  582 tatagaaata 591  Q
    ||||||||||    
T  49219099 tatagaaata 49219090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 645
Target Start/End: Original strand, 6466035 - 6466219
Alignment:
Q  461 aaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtt 560  Q
    ||||||| |||||| ||||| ||||| | |||||  ||||||||||||| |||| ||| |||||||||  |||||||| ||||||||||| |||| | ||    
T  6466035 aaaacaacttatgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattatacaaaaagaatt 6466134  T
Q  561 tgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    |  ||| |||| ||||||||||||| ||| | ||| ||||| || | ||| |||||| | ||||||| ||  |||||||||||||    
T  6466135 tcactttatttgatcttgtgttatataaacaacttattcataagcgcttacgctataagctgcaaaagaagttgtttatccaaac 6466219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 445 - 577
Target Start/End: Original strand, 7693984 - 7694115
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    |||| ||||||||||||||  | || |||| ||||| ||||||||||||| |||||||||||||||||||  |||||| ||||| |||||| || ||||     
T  7693984 tttgtgaaaacttatgaaat-agttaatgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagc 7694082  T
Q  545 ttatacgaaaacagtttgccttgattttatctt 577  Q
    |||||| ||||||||||| ||| |||| |||||    
T  7694083 ttatacaaaaacagtttgacttcatttcatctt 7694115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 476 - 592
Target Start/End: Complemental strand, 24929559 - 24929443
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc 575  Q
    ||||| |||| |||||||| |||||||||||||| |||| ||| | || |||| ||||||||| |||| || || |||||||||| | ||| ||||||||    
T  24929559 atgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaacagttagactttattttatc 24929460  T
Q  576 ttgtgttatagaaatag 592  Q
    || ||||||||||||||    
T  24929459 ttttgttatagaaatag 24929443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 6978959 - 6979033
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||||| |||| |||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  6978959 ttatgacatgtctataagctgttttcagcttattttcataaactctttaggatggcttataaaaacaacttatag 6979033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 453 - 601
Target Start/End: Complemental strand, 1137801 - 1137653
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  |||||| ||||| ||||||||||||| | |||||||||||| |||| | |||||| |||| ||| || || ||||||||| | |    
T  1137801 aacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaagcagcttatagattattcaa 1137702  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||| | | || ||| ||||||| | || |||||||||||| || |||||    
T  1137701 aaataatatgactttattttatatggtattatagaaatagtttattcat 1137653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 595
Target Start/End: Complemental strand, 17884134 - 17884015
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc 575  Q
    ||||| ||||||||||||| ||| |||| ||||| ||||  |  ||||||||| ||||||||| |||  |||||| |||||| |||  ||| ||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatc 17884035  T
Q  576 ttgtgttatagaaatagctt 595  Q
    || |||||||||||||||||    
T  17884034 ttttgttatagaaatagctt 17884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 595
Target Start/End: Original strand, 24370924 - 24371077
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgttta--taagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaata 542  Q
    ||||| |||||||||| |||||| |||||| |||| ||  ||||  |||||| ||||||||| ||||||| ||||||||||||||| ||||||||| |||    
T  24370924 tttgataaaacttatggaaacaacttatgacatgtatacataagccgttttcagcttatttctataaactatttaggatagcttatgaaaacaacttata 24371023  T
Q  543 gattatacgaaaacagtttgccttgattttatcttgt-gttatagaaatagctt 595  Q
    | || |   ||| || ||||  || |||||||||| | ||||||||||||||||    
T  24371024 gcttttgtaaaagcaatttgaatttattttatcttttggttatagaaatagctt 24371077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 30207569 - 30207686
Alignment:
Q  470 tatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgat 569  Q
    ||||| |||| | |||| ||||||| |||||||||||||| |||| || | |||||||| ||||||||| |||| ||||| ||||||||||||  || ||    
T  30207569 tatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttg-atttat 30207667  T
Q  570 tttatcttgtgttatagaa 588  Q
    ||||| || ||||||||||    
T  30207668 tttattttttgttatagaa 30207686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 450 - 592
Target Start/End: Original strand, 54325015 - 54325157
Alignment:
Q  450 gaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    ||||||||| | ||| | ||||||| ||||  ||||| ||||||| | |||| ||||||||||||  | |||||||| | |||| | || |||| |||||    
T  54325015 gaaaacttacggaaatagtttatgatatgtccataagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttata 54325114  T
Q  550 cgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
     |||||||||||| ||| |||||||||| ||| ||||||||||    
T  54325115 tgaaaacagtttgactttattttatcttttgtaatagaaatag 54325157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 444 - 577
Target Start/End: Complemental strand, 35064950 - 35064820
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||||||| |||||||||||||||  ||    |||||||||| |||||||| |||||||||||||||||||  | |||| ||||| |||||| |  ||||    
T  35064950 atttgagagaacttatgaaaacaacctac---atgtttataaattgttttcagcttatttccataaactctccatgatatcttatgaaaacagcatatag 35064854  T
Q  544 attatacgaaaacagtttgccttgattttatctt 577  Q
      ||||| ||||||||||  ||| ||||||||||    
T  35064853 cctatacaaaaacagtttatctttattttatctt 35064820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 520 - 628
Target Start/End: Complemental strand, 53422380 - 53422276
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatg 619  Q
    ||||||||| |||||||||    |||||||| ||||| |||||  || ||||||||||||||| |||||||||||| ||||| || | |||||||||| |    
T  53422380 atagcttatgaaaacaact----gattatacaaaaactgtttgaatttattttatcttgtgttgtagaaatagcttattcataagagcttatgctataag 53422285  T
Q  620 ttgcaaaat 628  Q
     ||||||||    
T  53422284 ctgcaaaat 53422276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 591
Target Start/End: Complemental strand, 29263443 - 29263321
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| ||||| ||||||||||||| ||||||||||| || ||||  |||||||||||| ||||||||| || | ||||  ||||||| | |  ||| |    
T  29263443 ttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatgtaacttta 29263344  T
Q  569 ttttatcttgtgttatagaaata 591  Q
    ||||||| | ||||| |||||||    
T  29263343 ttttatcatctgttagagaaata 29263321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 445 - 592
Target Start/End: Complemental strand, 4071975 - 4071832
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| | ||||||||||||  ||||||  ||||  |||||||||||| |||| | ||||||| |||| ||   |||||||| | ||||||| ||||     
T  4071975 tttgagagagcttatgaaaacagcttatgatttgttggtaagttgttttcagctt-tgtccataagctctcta---tagcttatcataacaacttatagc 4071880  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    ||||| ||||| | |||| ||| |||||||||| ||||||||||||||    
T  4071879 ttatatgaaaataatttgactttattttatcttttgttatagaaatag 4071832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 601
Target Start/End: Complemental strand, 2996670 - 2996514
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| | ||||||||||||| |||||| ||||  ||||| | |||||  ||||||| ||||  ||||  | |||||||||| ||||||||| |||      
T  2996670 tttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataac 2996571  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    |||||  |||||| |||| ||  |||||||||| |||||| ||| |||||| |||||    
T  2996570 ttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttattcat 2996514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 6987766 - 6987846
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    ||||||||||||| ||||  |||||||| || ||||| ||||||||| | |||||||||||||||| |||  |||||||||    
T  6987766 cttatttccataagctctccaggatagcgtaaaaaaataactaatagttaatacgaaaacagtttgactttgttttatctt 6987846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 589
Target Start/End: Original strand, 22666707 - 22666843
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||||||||||| || |||||| ||||| ||||| | ||||| | ||||||||||| |||||   || | |||||| |||| |  | |||||||||  ||    
T  22666707 aacttatgaaaaaaacttatgatatgttcataagctattttcagtttatttccatacactctactggtttgcttatgaaaatagtttatagattatctga 22666806  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaa 589  Q
    |||||||||| | | |||||||||||||||| |||||    
T  22666807 aaacagtttgaccttattttatcttgtgttacagaaa 22666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 30581702 - 30581782
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    ||||||||||||||||||  | |||| ||||| |||||| || |||| ||||||||||| |||||| ||| ||||||||||    
T  30581702 cttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatctt 30581782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 488 - 592
Target Start/End: Original strand, 45128326 - 45128430
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    ||||||| |||||||||||||| || | ||||| || |||| ||||||| | |||| ||||| || || | ||||  ||||||||||||| |||||||||    
T  45128326 tgttttcagcttatttccataagctttataggacagtttatgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttataga 45128425  T
Q  588 aatag 592  Q
    |||||    
T  45128426 aatag 45128430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 455 - 550
Target Start/End: Complemental strand, 1966028 - 1965933
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatac 550  Q
    ||||||||||||| |||||| ||||| ||||| ||||||   |||||||||| ||  | | |||||||||||||||||| |||| ||| |||||||    
T  1966028 cttatgaaaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaataacttataaattatac 1965933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 8469362 - 8469413
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccata 508  Q
    ||||||| |||||||||| ||||| ||||||||||||| |||||||||||||    
T  8469362 tatgaaagcaatttatgacatgttcataagttgttttcagcttatttccata 8469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 540 - 595
Target Start/End: Complemental strand, 21952577 - 21952522
Alignment:
Q  540 atagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||| |||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  21952577 atagcttatacgataacagtttgacttgattttaccttttgttatagaaatagctt 21952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 595
Target Start/End: Original strand, 50742809 - 50742957
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| |||||||||||||| || |||| ||||| |||   |||||||  || |||| ||||| ||||  |||||||||||| ||||||| | ||  |    
T  50742809 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttcaactcattttcataagctctccaggatagcttatgaaaacaagttattta 50742908  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||| ||||||   || ||| ||||||| |||||||||| |||||||||    
T  50742909 ttatacaaaaaca--atgacttaattttatgttgtgttataaaaatagctt 50742957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 535
Target Start/End: Original strand, 55547041 - 55547107
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| |||| |||||||||||||  ||||||||||||||||| || || ||||||||| ||||||    
T  55547041 ttatgacatgtctataagttgtttttagcttatttccataaacttttcagcatagcttatgaaaaca 55547107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 8469008 - 8468935
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||||||||||| | |||||| ||||| |||| ||| ||| ||||| |||||||||||||| ||||| |||||    
T  8469008 ataagttgttttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttatatgaaaa 8468935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 556
Target Start/End: Complemental strand, 30632047 - 30631943
Alignment:
Q  451 aaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatac 550  Q
    ||||||||| ||||||| |||||  ||||| ||||| ||||||  ||||||||||| || | ||| | ||||||| || ||||||||| |||||||||||    
T  30632047 aaaacttataaaaacaacttatggcatgttcataagctgttttaagcttatttccaaaagcacttcatgatagctcatgaaaacaact-atagattatac 30631949  T
Q  551 gaaaac 556  Q
     |||||    
T  30631948 aaaaac 30631943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 562
Target Start/End: Complemental strand, 42866157 - 42866048
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||||||| ||||| | ||||| ||||  ||||| || |||  ||||| |||||||| ||||  |||||||||||| ||||||||| |||| |||||  |    
T  42866157 aacttatgtaaacattctatgatatgtccataagatgcttttagcttacttccataagctctcaaggatagcttatgaaaacaacttatagcttatataa 42866058  T
Q  553 aaacagtttg 562  Q
    ||||||||||    
T  42866057 aaacagtttg 42866048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 601
Target Start/End: Complemental strand, 3891611 - 3891518
Alignment:
Q  506 ataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    |||| |||| ||||||||||||||||||||||| | | ||||||| ||||| ||| | ||| ||||||||   |||||||||||||| || |||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttattttatc--ctgttatagaaatagtttattcat 3891518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 562
Target Start/End: Complemental strand, 18020026 - 18019951
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaact-aatagattatacgaaaacagtttg 562  Q
    ||||||| | ||||||||||||||||| ||| ||||||||| ||||||||| |  || ||||| ||||||||||||    
T  18020026 tgttttcagtttatttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttg 18019951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 591
Target Start/End: Complemental strand, 23819171 - 23819041
Alignment:
Q  460 gaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagt 559  Q
    |||||||  |||||| ||||  |||||||||||||  |||||||| |||| ||||| | |||||||||| ||||||  | |||  ||||| |||||||||    
T  23819171 gaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagt 23819072  T
Q  560 ttgccttgattttatcttgtgttatagaaata 591  Q
    ||| ||  ||||||| || |||||| ||||||    
T  23819071 ttgactacattttatatt-tgttatggaaata 23819041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 592
Target Start/End: Original strand, 30338601 - 30338712
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttat-aaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    ||||| ||||||  |||||||| ||||||||||  | || ||||||| |||||||  | |||| ||||| |||||||||||  ||| ||| |||||| ||    
T  30338601 ataagctgttttatgcttattttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatcttttg 30338700  T
Q  581 ttatagaaatag 592  Q
    ||||||||||||    
T  30338701 ttatagaaatag 30338712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 528
Target Start/End: Complemental strand, 35743355 - 35743296
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    |||||| ||||||||||||||||| |  ||||||||||||||||||| | ||||| ||||    
T  35743355 ttatgacatgtttataagttgtttccaacttatttccataaactcttcatgatagtttat 35743296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 595
Target Start/End: Original strand, 52645829 - 52645872
Alignment:
Q  552 aaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||  ||||||||||||| |||||||||||||||||    
T  52645829 aaaacagtttgaattgattttatcttttgttatagaaatagctt 52645872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 595
Target Start/End: Complemental strand, 52735168 - 52735069
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||||| ||||| | |||||||||  ||||||||  |||  ||||| ||||  | |||| ||| |||||||||| ||||| |||||||||||    
T  52735168 gcttatttccataagctcttcaagatagcttacgaaaacaacatataacttatatgaaagtaatttgactttattttatcttttgttacagaaatagctt 52735069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 509
Target Start/End: Original strand, 3176087 - 3176141
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||||||||||  |||||  |||| |||||||||||||| ||||||||||||||    
T  3176087 cttatgaaaacatcttatgtcatgtctataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 521 - 579
Target Start/End: Original strand, 13949893 - 13949951
Alignment:
Q  521 tagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgt 579  Q
    ||||||||| |||||||| |||| ||||| ||||||| |||| ||| ||||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatcttgt 13949951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 562
Target Start/End: Complemental strand, 21157814 - 21157748
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttg 562  Q
    |||||||||||||| ||||| |||||||| ||| |||||| || |||| ||| | ||||||||||||    
T  21157814 gcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttg 21157748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 29467621 - 29467675
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatag 523  Q
    |||||| ||||  ||||| ||||||| ||||||||||||||||||| ||||||||    
T  29467621 ttatgacatgtccataagctgttttcagcttatttccataaactctctaggatag 29467675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 37575909 - 37575979
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctt 515  Q
    ||||||| |||||||||||| || |||| | ||  | ||||||||||||| ||| ||||||||||||||||    
T  37575909 tttgagagaacttatgaaaataacttataacatactcataagttgttttcagctcatttccataaactctt 37575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 453 - 591
Target Start/End: Original strand, 47118946 - 47119084
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||| | |||| ||  ||||  ||||||||| |||||| | |||||  |||| | |||||| ||| || |||||| |||| ||||| ||    
T  47118946 aacttatgaaaacaactcatgacattgttattggttgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatga 47119045  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||||| |||  |||  ||||||||| || ||||||||||    
T  47119046 aaacaatttaactttgttttatcttttgatatagaaata 47119084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 525 - 595
Target Start/End: Complemental strand, 50746017 - 50745947
Alignment:
Q  525 ttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||||||||  ||| |||||  |||||||||||  || |||||||||| ||||||| |||||||||    
T  50746017 ttataaaaacaacttgtagtttatataaaaacagtttgattttattttatcttttgttataaaaatagctt 50745947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 509
Target Start/End: Complemental strand, 4691946 - 4691881
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||||||||||||||| |||||| |||||| |||   ||| ||||||||| |||||||| |||||    
T  4691946 atttgagaaaacttatggaaacaacttatgacatgcccatatgttgttttcagcttattttcataa 4691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 27123325 - 27123394
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||||| | |||||| |||||| |||||| |||| | ||||||||||||  ||||||||||||| ||||    
T  27123325 tttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctct 27123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 38478728 - 38478683
Alignment:
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||||||| ||| || ||||||||||||||||||||||||| |||||    
T  38478728 cagtttgactttatcttatcttgtgttatagaaatagcttattcat 38478683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 454 - 535
Target Start/End: Complemental strand, 46110291 - 46110210
Alignment:
Q  454 acttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||||||||||| |||||| ||  | ||||||||||||| ||||||||| |||| ||||  |  ||||||||| ||||||    
T  46110291 acttatgaaaacaacttatgatatactcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaaaca 46110210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 560
Target Start/End: Complemental strand, 53943693 - 53943588
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||||||||  ||||||||| |||| || | ||| |||| |||||||||||||| ||||  | || | |||||  |||||||| |||| ||||| ||||    
T  53943693 cttatgaaaatgatttatgaagtgttcatgacttgatttcagcttatttccataagctctccatgacaacttatgtaaacaacttatagtttatatgaaa 53943594  T
Q  555 acagtt 560  Q
    ||||||    
T  53943593 acagtt 53943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 590
Target Start/End: Original strand, 55870390 - 55870459
Alignment:
Q  521 tagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaat 590  Q
    |||||||| ||||||||| |||| ||||  |||||||||||| ||| |||| ||||| ||||||| ||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatcttttgttataaaaat 55870459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 5131260 - 5131304
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagctt 526  Q
    ||||||||||||| |||||||||||||| ||||  ||||||||||    
T  5131260 ataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 535
Target Start/End: Complemental strand, 18011958 - 18011878
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||  |||| | |||| ||||||  |||||  |||||||| ||||||||||| | |||||||||| ||||||    
T  18011958 cttatgaaaacagcttataatatgtatataagccgtttttagcttattttcataaactcttcaagatagcttatgaaaaca 18011878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 19395043 - 19395103
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttc 504  Q
    |||||||| ||||||| ||||||| ||| || ||||||||||| | ||||| |||||||||    
T  19395043 atttgagagaacttataaaaacaacttacgacatgtttataagctattttcagcttatttc 19395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 536 - 592
Target Start/End: Original strand, 20936066 - 20936122
Alignment:
Q  536 actaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||||||| ||| | ||||| |||||| ||| |||||||||| ||||||||||||||    
T  20936066 actaatagcttacatgaaaatagtttgactttattttatcttttgttatagaaatag 20936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 496 - 600
Target Start/End: Original strand, 45104431 - 45104535
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||  ||||||||||  |||||||||||| ||||| || || |||||||  ||||||  ||| ||| |||||||| |||||  | ||||||||||    
T  45104431 gcttatttttataaactcttatggatagcttatacaaacagcttatggattatataaaaacaagttgactttattttatcatgtgtcgtcgaaatagctt 45104530  T
Q  596 tttca 600  Q
     ||||    
T  45104531 attca 45104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 47970309 - 47970265
Alignment:
Q  551 gaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| |||||| ||| |||||||||| |||||||||||||||||    
T  47970309 gaaaatagtttgacttcattttatcttttgttatagaaatagctt 47970265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 469 - 595
Target Start/End: Original strand, 281845 - 281971
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttga 568  Q
    |||||| |||| |||||||||||||| |||||||||||| | |||| ||||||||||||| || ||| || |||| ||||| |||||||  ||| ||| |    
T  281845 ttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgacttta 281944  T
Q  569 ttttatcttgtgttatagaaatagctt 595  Q
    ||||||||| |||||||| ||||||||    
T  281945 ttttatcttttgttataggaatagctt 281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 445 - 605
Target Start/End: Complemental strand, 33887927 - 33887767
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    ||||||| || ||||||||| |  |||||| ||||| | |||||||||||  ||||||||||||| |  || |||||||||||| ||||||  | || ||    
T  33887927 tttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaaacagtttattga 33887828  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagt 605  Q
    |||||| |||||||||||  ||  ||||||||||||||||| ||||| ||| |||||||||    
T  33887827 ttatactaaaacagtttgagtttgttttatcttgtgttataaaaatatcttattcattagt 33887767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 462 - 593
Target Start/End: Complemental strand, 2117483 - 2117352
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    ||||||||||||  |||| |||||| ||||||  ||||||||| |||| |||| ||||||| ||||| ||||||||| |||||||||| ||||| |||||    
T  2117483 aaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaatagttt 2117384  T
Q  562 gccttgattttatcttgtgttatagaaatagc 593  Q
    | |||  ||||||| | ||| |||||||||||    
T  2117383 gactttgttttatcctttgtcatagaaatagc 2117352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 643
Target Start/End: Original strand, 33080565 - 33080753
Alignment:
Q  459 tgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaat----agattatacgaaa 554  Q
    ||||| ||| |||||| ||||||||||||| ||||| | ||||||| |||| ||||  ||||||| ||||  ||| | || ||    |||  |||| |||    
T  33080565 tgaaaccaacttatgacatgtttataagttattttcagtttatttctataagctctccaggatagtttatgtaaatagcttatttatagaccatacaaaa 33080664  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataaactgtttatccaa 643  Q
    ||| |||| ||||| |||||| ||||||||||||| ||||| ||||| |||| |||||||||| | ||||||||||||| |||||||||    
T  33080665 acaatttgacttgaatttatcctgtgttatagaaaaagcttattcataagtgcttatgctataagctgcaaaataaactatttatccaa 33080753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 445 - 528
Target Start/End: Complemental strand, 30524034 - 30523951
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||||||||||||||||||| |||||| ||||  || ||||| |||  |||||||||||||| ||||||||||||||||||    
T  30524034 tttgagaaaacttatgaaaacaaattatgacatgtccattagttgcttttagcttatttccataagctctttaggatagcttat 30523951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 459 - 591
Target Start/End: Complemental strand, 4006797 - 4006665
Alignment:
Q  459 tgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacag 558  Q
    ||||||||| ||| || ||||  ||||||| ||||| |||||||| ||||| ||||   ||||||||||| ||||||||| |||| |||||  ||||||     
T  4006797 tgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaa 4006698  T
Q  559 tttgccttgattttatcttgtgttatagaaata 591  Q
    |||| ||| |||||||| | |||||||||||||    
T  4006697 tttgactttattttatcatttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 455 - 543
Target Start/End: Original strand, 20377903 - 20377991
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    ||||||||||||| |||||| |||| |||||||||||||||||||||||||  || |||| |||||| | |||| ||||||||| ||||    
T  20377903 cttatgaaaacaacttatgacatgtctataagttgttttcggcttatttcccaaagctctataggatggattatgaaaacaacttatag 20377991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 453 - 594
Target Start/End: Original strand, 31776254 - 31776396
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtt--tataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatac 550  Q
    ||||||| ||||||| |||||| ||| |  |||||| |||||||||| ||||||||| | ||||  |  ||||||||| ||||||||| ||  |||||||    
T  31776254 aacttattaaaacaacttatgacatgctcatataagctgttttcggcgtatttccattagctctccattatagcttatgaaaacaacttattaattatac 31776353  T
Q  551 gaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
     |||||| |||| ||| ||||||| |||||||||||||||||||    
T  31776354 aaaaacaatttgactttattttat-ttgtgttatagaaatagct 31776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 445 - 595
Target Start/End: Complemental strand, 2735167 - 2735016
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgttt-ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    ||||||| |||||||||||||   |||||| || ||| ||||| |||||||||||||||| |||||  | || | ||| |||||| |||||| || ||||    
T  2735167 tttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatag 2735068  T
Q  544 attatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||| |||| | |||  ||| |||||||||| ||||||||| |||||||    
T  2735067 attatacaaaaataatttaactttattttatcttttgttatagacatagctt 2735016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 555
Target Start/End: Complemental strand, 34403937 - 34403842
Alignment:
Q  460 gaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||| |||||| ||||| ||||| |||||||  ||||||||||||| |||||||| | ||||||| |||||| || || |||||||||||||    
T  34403937 gaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaacatcttatcgattatacgaaaa 34403842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 536
Target Start/End: Original strand, 7931709 - 7931790
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaa 536  Q
    ||||||||||||| |||||| |||||  |||||||||||| |||||||||| ||| |||| ||||||||||| | |||||||    
T  7931709 cttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaacaa 7931790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 595
Target Start/End: Complemental strand, 31624278 - 31624205
Alignment:
Q  522 agcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||| |||||| ||||||||||||||||||||| |||    | |||||||||| |||||||||||||||||    
T  31624278 agcttattaaaacagctaatagattatacgaaaacaatttaaacttattttatcttttgttatagaaatagctt 31624205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 536
Target Start/End: Complemental strand, 32665746 - 32665665
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaa 536  Q
    |||||| ||||| ||||||| |||  ||||   ||||||| || |||||||| |||||||||||||||||||||||||||||    
T  32665746 cttatggaaacattttatgacatgcctatagcctgttttcagcatatttccacaaactctttaggatagcttataaaaacaa 32665665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 595
Target Start/End: Original strand, 33826777 - 33826858
Alignment:
Q  514 tttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||| |||||||||||  || ||| ||||||| ||||||||||| ||| |||| ||||| ||||||| |||||||||    
T  33826777 tttaggataacttataaaaactgcttatatattatacaaaaacagtttgactttatttaatcttctgttatataaatagctt 33826858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 595
Target Start/End: Complemental strand, 1403019 - 1402943
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||| ||||||| | |||| ||||| ||||| |||||  ||| |||||||||| |||||||||||||||||    
T  1403019 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaatagctt 1402943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 2112280 - 2112188
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||| |||||| ||||| ||||||||||||||| ||||||| |||| | || || ||||| |||| ||||||||| |||| ||||| ||||    
T  2112280 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 2112188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 577
Target Start/End: Complemental strand, 4420723 - 4420610
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||||| ||||| ||||| ||||||| |||||||||||||| ||||  | |||||||||  |||| ||||  ||| |||||| |||| |||||    
T  4420723 aaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataact--tagcttatacaaaaatagttt 4420626  T
Q  562 gccttgattttatctt 577  Q
    | ||| ||||||||||    
T  4420625 gactttattttatctt 4420610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 556
Target Start/End: Original strand, 7945868 - 7945967
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||| |||||  |||||||| |||||||||  |||||||||||||| ||||  |||||||| ||| ||||||  | ||||||||||| ||||    
T  7945868 ttatgaaaacaacttatggcatgtttattagttgttttaagcttatttccataagctctccaggatagc-tatgaaaacaggttatagattatacaaaaa 7945966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 595
Target Start/End: Original strand, 2027390 - 2027529
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||  |||||| || |  ||||| ||||||| ||||||||   ||||||||  | | |||||||| | |||| || |||| ||||| |||||    
T  2027390 ttatgaaaacagcttatgacatttccataagctgttttcagcttatttatttaaactctacatgctagcttatgagaacagcttataggttatatgaaaa 2027489  T
Q  556 cagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
     |||||| ||| |||||||||| ||||||| |||||||||    
T  2027490 tagtttgactttattttatcttttgttataaaaatagctt 2027529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 595
Target Start/End: Original strand, 9093572 - 9093679
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    ||||||| |||||||| | |||  ||| || || ||||||| |||||| || |||| ||||||||||||| |||  ||| |||||||||| || ||||||    
T  9093572 tgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatataga 9093671  T
Q  588 aatagctt 595  Q
    ||||||||    
T  9093672 aatagctt 9093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 33832254 - 33832309
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccata 508  Q
    ||||||||||||||| |||||| ||||||||||||||||||  |||||||| ||||    
T  33832254 aacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 528
Target Start/End: Complemental strand, 34939610 - 34939527
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||| | |||||| |||||| |||||| | ||   |||||||||||| |||||||||||||| ||||| ||||||||||||    
T  34939610 tttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttat 34939527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 537
Target Start/End: Original strand, 7931800 - 7931854
Alignment:
Q  483 taagttgttttcggcttatttccataaactctttaggatagcttataaaaacaac 537  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| | ||||||||    
T  7931800 taagttgttttcagcttatttccataagctctataggatagcttgtgaaaacaac 7931854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 617
Target Start/End: Original strand, 17241256 - 17241395
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatc 575  Q
    ||||| |||||||||||||  ||||||||||||||||||  | ||||||| || ||||  ||| |||||||||||   | ||||||| ||   |||||||    
T  17241256 atgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaatgacttatagattatac--tatcagtttgactatgttttatc 17241353  T
Q  576 ttgtgttatagaaatagctttttcattagtgtttatgctata 617  Q
     ||| ||||||||||||||| | ||| || | ||||||||||    
T  17241354 gtgttttatagaaatagcttatgcataagcgcttatgctata 17241395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 591
Target Start/End: Original strand, 24836217 - 24836318
Alignment:
Q  487 ttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatag 586  Q
    |||||| | |||||||||||||| ||||  | |||||||||  |||||   | |||| ||||||||||||| |||| ||| |||||||||| ||||||||    
T  24836217 ttgtttccagcttatttccataagctctccatgatagcttacgaaaac---ttatagtttatacgaaaacaatttgactttattttatcttttgttatag 24836313  T
Q  587 aaata 591  Q
    |||||    
T  24836314 aaata 24836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 31686336 - 31686426
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||| ||||||| ||||||| |||||| | ||||||||  ||||||| |||||| ||| ||| ||||  |||||||||||| ||||||    
T  31686336 tttgagagaacttatcaaaacaacttatgacaagtttataatctgttttcagcttatgtccgtaagctctccaggatagcttatgaaaaca 31686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 601
Target Start/End: Complemental strand, 415326 - 415245
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 601  Q
    ||||||||||||||||||| |||| ||||||||||||| |||  |||  |||||||| | || ||||||||| ||| |||||    
T  415326 atagcttataaaaacaacttatagcttatacgaaaacaatttaactttgttttatctcgcgtaatagaaataacttattcat 415245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 534
Target Start/End: Original strand, 27909623 - 27909700
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaac 534  Q
    |||| ||||||| ||||| ||||  ||||||||||||| |||||||||||||| ||||  || | |||||||||||||    
T  27909623 tatggaaacaatatatgacatgtccataagttgttttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 595
Target Start/End: Original strand, 33500463 - 33500604
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttg-ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaa 553  Q
    |||||||||||||||||||| ||||  |||||||| |||||| |||||||||||||  |||  | ||||||||    ||||| || |||  |||||   |    
T  33500463 cttatgaaaacaatttatgacatgtgcataagttgtttttcgacttatttccataagttctacatgatagcttgcggaaacagcttataacttatattga 33500562  T
Q  554 aacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||  || | |||||||| |||||||||||||||||    
T  33500563 aacagtttgattttactttatcttttgttatagaaatagctt 33500604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 503
Target Start/End: Complemental strand, 2455358 - 2455298
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaat-gtttataagttgttttcggcttattt 503  Q
    |||||||| ||||||||||||||| |||| | || ||||||||||||||||| ||||||||    
T  2455358 atttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattt 2455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 571
Target Start/End: Original strand, 10272865 - 10272925
Alignment:
Q  511 ctctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattt 571  Q
    |||||| || || |||||| ||||||||||||||| |||||||||||||||| ||| ||||    
T  10272865 ctctttgggctaacttatagaaacaactaatagataatacgaaaacagtttgactttattt 10272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 595
Target Start/End: Original strand, 20671877 - 20671988
Alignment:
Q  483 taagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgtt 582  Q
    |||| ||||||| ||||| ||||| || |||| || ||||| |||| ||||||| | | || ||||||||||||| |||| ||| |||||||||| || |    
T  20671877 taagctgttttcagcttacttcca-aagctctctatgatagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgat 20671975  T
Q  583 atagaaatagctt 595  Q
     ||||||||||||    
T  20671976 ctagaaatagctt 20671988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 529
Target Start/End: Original strand, 32577959 - 32578043
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttata 529  Q
    ||||||| | ||||||||||||| |||||| ||||   | || ||||||| |||||||||||||  ||||| |||||||||||||    
T  32577959 tttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagcttata 32578043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 595
Target Start/End: Complemental strand, 3155253 - 3155123
Alignment:
Q  464 acaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgc 563  Q
    |||| |||||| |||| |||||| ||||||| |||||||||||| | ||||  |||||| ||||| |||| | || |||| ||||| | ||||||||||     
T  3155253 acaacttatgacatgtctataagctgttttcagcttatttccat-agctctccaggatatcttatgaaaatagcttataggttatatggaaacagtttga 3155155  T
Q  564 cttgattttatcttgtgttatagaaatagctt 595  Q
    |||  ||||||||| ||| | ||| |||||||    
T  3155154 ctttgttttatcttttgtaaaagagatagctt 3155123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 577
Target Start/End: Original strand, 3181059 - 3181173
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||||||||||||||||||| ||| ||||||||||| || | ||||  | |||| ||||| ||||||  | || | ||||| |||||| ||||    
T  3181059 aaacaacttatgaaatgtttataagttatttccggcttatttcaat-agctctccaagataacttatgaaaacagtttatggtttatatgaaaacggttt 3181157  T
Q  562 gccttgattttatctt 577  Q
    | ||| ||||||||||    
T  3181158 gactttattttatctt 3181173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 595
Target Start/End: Complemental strand, 27894100 - 27893994
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    ||||||| |||||||| ||||| || || | |||| ||||| |||||| ||||||| |||||  |||||| |||| ||| ||||||| || |||| ||||    
T  27894100 tgttttcagcttattttcataagcttttcaagatatcttatgaaaaca-ctaatagtttatattaaaacaatttgactttattttatattctgttgtaga 27894002  T
Q  588 aatagctt 595  Q
    ||||||||    
T  27894001 aatagctt 27893994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 528
Target Start/End: Complemental strand, 34939817 - 34939758
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    |||||| ||||  |||| |||||||| |||||||||||||||||||  ||||||||||||    
T  34939817 ttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttat 34939758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 515
Target Start/End: Complemental strand, 6537020 - 6536974
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctt 515  Q
    |||||| ||||| ||||||||||||| |||||||||||||| |||||    
T  6537020 ttatgacatgttcataagttgttttcagcttatttccataagctctt 6536974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 24782056 - 24782006
Alignment:
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||| ||||||| ||||  ||||||||||||| |||||||||||||||||    
T  24782056 ttatatgaaaacaatttgatttgattttatcttttgttatagaaatagctt 24782006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 531
Target Start/End: Complemental strand, 30604993 - 30604907
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaa 531  Q
    ||||||| | ||||| |||||||  ||||||||||| ||||||| |||||  ||||||||||||  ||||| |||||| || |||||    
T  30604993 tttgagagagcttattaaaacaacctatgaaatgttcataagttcttttcaacttatttccatactctcttcaggataactaataaa 30604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 509
Target Start/End: Complemental strand, 33498706 - 33498652
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    ||||||||||||| |||||| |||| |||| ||| ||||| ||||||||||||||    
T  33498706 cttatgaaaacaacttatgacatgtctataggttattttcagcttatttccataa 33498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 2460124 - 2460193
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||||| | |||||| |||||| |||||| |||| | ||||||||||||  ||||||||||||| ||||    
T  2460124 tttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctct 2460193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 3785748 - 3785805
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatctt 577  Q
    |||||||| ||||||| || |||| |||||||||||||||||  ||| ||||||||||    
T  3785748 atagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatctt 3785805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 7785741 - 7785786
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    |||||| |||| |||||||||||||| |||||||||||||| ||||    
T  7785741 ttatgacatgtctataagttgttttcagcttatttccataagctct 7785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 593
Target Start/End: Original strand, 34633206 - 34633247
Alignment:
Q  552 aaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    ||||||||||| ||| |||||||||||| |||||||||||||    
T  34633206 aaaacagtttgacttcattttatcttgttttatagaaatagc 34633247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 562
Target Start/End: Original strand, 725673 - 725745
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttg 562  Q
    ||||| |||||||||||||| |||||| | |||| ||| |||||||||  |||| |||||  |||||||||||    
T  725673 ttttcagcttatttccataagctctttcgaataggttacaaaaacaacatatagtttatataaaaacagtttg 725745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 595
Target Start/End: Original strand, 10452419 - 10452483
Alignment:
Q  531 aaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| |||| ||||| ||||| ||||||  || ||||||| || |||||||||||||||||    
T  10452419 aaacaacttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagctt 10452483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 515
Target Start/End: Complemental strand, 30863333 - 30863273
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctt 515  Q
    ||||||||||||| |||||| ||||  ||||||||||||| ||||| ||| |||| |||||    
T  30863333 cttatgaaaacaacttatgacatgtacataagttgttttcagcttacttctataagctctt 30863273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 33089604 - 33089540
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccata 508  Q
    |||| ||| ||||||||||||||  ||| || ||||||||||||||||||  |||||||| ||||    
T  33089604 atttcagagaacttatgaaaacagcttaggacatgtttataagttgttttacgcttattttcata 33089540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 595
Target Start/End: Complemental strand, 29973134 - 29973028
Alignment:
Q  489 gttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaa 588  Q
    |||||| | |||||||||||||||||  |||||||||||| ||||||||| |||| ||||  ||||| |||||| ||| |||||| ||||||||| ||||    
T  29973134 gttttcagtttatttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaa 29973035  T
Q  589 atagctt 595  Q
    |||||||    
T  29973034 atagctt 29973028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 633
Target Start/End: Complemental strand, 926508 - 926396
Alignment:
Q  522 agcttataaaaacaactaatagattatacgaaaacagttt-gccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgt 620  Q
    ||||||| ||||||||| |||||| |||| |||||||||| | ||| |||||||||||||||||||||||||||| |||||  | | |||||||||  |     
T  926508 agcttatgaaaacaacttatagataatacaaaaacagttttgactttattttatcttgtgttatagaaatagcttattcatatgcgcttatgctattagc 926409  T
Q  621 tgcaaaataaact 633  Q
    |||||||||||||    
T  926408 tgcaaaataaact 926396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 500 - 645
Target Start/End: Original strand, 34522082 - 34522229
Alignment:
Q  500 atttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaac--agtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    |||| ||||| |||||||||||||||| | |||| | ||  |||||||||| ||||   |||||| ||| |||||||||||||| ||||||||||||| |    
T  34522082 attttcataagctctttaggatagcttttgaaaataccttttagattatactaaaaagtagtttgactttattttatcttgtgtcatagaaatagcttat 34522181  T
Q  598 tcattagtgtttatgctatatgttgcaaaataaactgtttatccaaac 645  Q
    |||| || | ||||||| || ||||||||||||  | |||||||||||    
T  34522182 tcataagcgcttatgctgtaagttgcaaaataagttttttatccaaac 34522229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 496 - 593
Target Start/End: Original strand, 27728045 - 27728142
Alignment:
Q  496 gcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    |||||||||||| | | || ||||||||||||| |||||||||||||  ||||| ||||| |||||| ||| |||||||||| | |||||||||||||    
T  27728045 gcttatttccatcatccctctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattttatctttttttatagaaatagc 27728142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 28769349 - 28769462
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgt 581  Q
    ||||||||||||| |||||||||||||||||||  |  ||||||||| |||||| || |||| ||||| ||||| |||||| ||| |||||||  | |||    
T  28769349 ataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgt 28769448  T
Q  582 tatagaaatagctt 595  Q
    ||||| ||||||||    
T  28769449 tataggaatagctt 28769462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 453 - 585
Target Start/End: Complemental strand, 38537680 - 38537548
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||| ||| || ||| | ||||| | |||||||||||||||||| |  | || ||||||| |||| ||| || || ||||||||||| |    
T  38537680 aacttatgaaaacaacttacgacatgctcataagctattttcggcttatttccatgagtttttcaggatagtttatgaaagcagcttatagattatacaa 38537581  T
Q  553 aaacagtttgccttgattttatcttgtgttata 585  Q
    |||||  ||| ||| ||||||||||||||||||    
T  38537580 aaacaaattgacttcattttatcttgtgttata 38537548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 42215287 - 42215426
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||| |||||||||  ||||||  |||| ||||| ||||||| |||||||| ||||| ||||  |||||||| ||| |||| |  | ||||||||||| |    
T  42215287 aactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaa 42215386  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |||||||||| ||| |||||||||  |||| |||||||||    
T  42215387 aaacagtttgactttattttatctcatgttgtagaaatag 42215426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 535
Target Start/End: Complemental strand, 8060766 - 8060676
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||| | ||||||||||||| ||||| || ||| ||||||| ||||| |||||||||||||| |||| |||||| |||||| ||||||    
T  8060766 tttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaaca 8060676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Original strand, 30277255 - 30277308
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  30277255 ataagttgttttcagcttatttccataaactctctaggatagcttatgaaaaca 30277308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 595
Target Start/End: Complemental strand, 4558885 - 4558745
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||| ||| || ||||||  ||| |||||||||||||  | |||||||||||| |||| |||||||||||||  ||||| || ||||  |||| ||||    
T  4558885 cttatggaaataacttatgatgtgtctataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaa 4558786  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    | | |||  ||| |||||||||| | |||||||||||||||    
T  4558785 ataatttaactttattttatcttttattatagaaatagctt 4558745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 595
Target Start/End: Complemental strand, 11183632 - 11183492
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||| ||||||| |||||| |||| |||||| ||||||| |||||||||||||| ||||  ||| |||||| | |||||| || |||| | ||| ||      
T  11183632 cttataaaaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagctaatatgagg 11183533  T
Q  555 acagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| |||  ||||||||  |||| ||||||||||||    
T  11183532 acagtttgactttgttttatctgttgttttagaaatagctt 11183492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 459 - 571
Target Start/End: Complemental strand, 24258149 - 24258042
Alignment:
Q  459 tgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacag 558  Q
    |||||||||||||||| ||||  ||| ||| ||||  |||||||| |||||||||||||||||||||     |||||| | |||| ||||||||||||||    
T  24258149 tgaaaacaatttatgacatgtacataggttattttaagcttatttacataaactctttaggatagct-----aaacaatttatagcttatacgaaaacag 24258055  T
Q  559 tttgccttgattt 571  Q
    ||||  |||||||    
T  24258054 tttgatttgattt 24258042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 575
Target Start/End: Original strand, 30191124 - 30191244
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    |||||| |||||| |||||| ||||| | || |||||||| ||||||||||||||||  || |||||||||||| |||| | || |||||||||| |  |    
T  30191124 cttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttatagattatatgtga 30191223  T
Q  555 acagtttgccttgattttatc 575  Q
     ||||||| ||| ||||||||    
T  30191224 gcagtttgactttattttatc 30191244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 532
Target Start/End: Complemental strand, 3254314 - 3254235
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaa 532  Q
    |||||| |||||||  |||||| ||||| ||||| ||||||| ||||||||| ||| ||||| |||||||||||||||||    
T  3254314 aacttaagaaaacagcttatgacatgttcataagctgttttcagcttatttctatacactctataggatagcttataaaa 3254235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 445 - 536
Target Start/End: Complemental strand, 12851273 - 12851182
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaa 536  Q
    |||| |||||||||||||||||  |||| | ||||| ||||| |||||||||||||||| ||||| ||||  |||| ||||||| |||||||    
T  12851273 tttgggaaaacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaa 12851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 445 - 592
Target Start/End: Original strand, 37822632 - 37822778
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaataga 544  Q
    |||||||||| |||| |||||||||||||| |||||| ||||||||||||  ||||||| ||||| ||||| | |||| ||| || ||||| || |||      
T  37822632 tttgagaaaatttattaaaacaatttatgatatgtttgtaagttgttttc-acttattttcataagctcttcaagataacttctataaacagcttatatc 37822730  T
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    ||||| | ||||||||||  || | ||||| || ||||||| ||||||    
T  37822731 ttatatgtaaacagtttgaatttaatttattttttgttatataaatag 37822778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 453 - 575
Target Start/End: Complemental strand, 10383974 - 10383852
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  |||||| || || ||||| ||||| | |||||||||||||| |||| || ||||| |||  |||||| |  |||||||||||||    
T  10383974 aacttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataagctctatatgatagtttacgaaaacagcatatagattatacga 10383875  T
Q  553 aaacagtttgccttgattttatc 575  Q
    |||||| |||  || ||||||||    
T  10383874 aaacagcttgattttattttatc 10383852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 533
Target Start/End: Complemental strand, 14949953 - 14949875
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    |||||||||| || |||||| ||||  ||||| ||||||| ||||||||| |||| |||||||||||||||||| ||||    
T  14949953 cttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 597
Target Start/End: Complemental strand, 34770931 - 34770837
Alignment:
Q  503 tccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttt 597  Q
    ||||| |||||| ||||||||||||| ||||||||| |||| ||| | ||||||| |||| ||| |||||||||| ||| || ||||||| ||||    
T  34770931 tccatgaactctctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagttttt 34770837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 533
Target Start/End: Original strand, 11188136 - 11188216
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    |||| |||||||||  |||||| |||| ||||| |||||||| | ||||| ||||||||||| ||||||||||||| ||||    
T  11188136 aactaatgaaaacagcttatgacatgtctataacttgttttcagtttattaccataaactctctaggatagcttatcaaaa 11188216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 557
Target Start/End: Complemental strand, 43504840 - 43504736
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||| |||||||||| ||| ||  |||||||||| ||||||| ||||||||||||||  |||  | ||||||||||||||||| || |||| || ||| |    
T  43504840 aactgatgaaaacaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagcttctacta 43504741  T
Q  553 aaaca 557  Q
    |||||    
T  43504740 aaaca 43504736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 455 - 522
Target Start/End: Complemental strand, 6950409 - 6950342
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggata 522  Q
    |||||| ||||||  ||||| ||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  6950409 cttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagctctttaggata 6950342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 562
Target Start/End: Complemental strand, 4390299 - 4390193
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||| |||||  ||||| |||||||||||||  ||||||||  ||| |||||  ||| ||||||| |||| | || ||||||||| | ||||    
T  4390299 ttatgaaaacaacttatggcatgttcataagttgttttccccttatttcattaagctcttctggagagcttatgaaaatagcttatagattatgcaaaaa 4390200  T
Q  556 cagtttg 562  Q
    |||||||    
T  4390199 cagtttg 4390193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 444 - 546
Target Start/End: Complemental strand, 8255490 - 8255388
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    |||||||| |||||||| |||||| | |||| ||||  |||||||||||||  ||||||||| ||||||   ||||||| ||||| |||||| || ||||    
T  8255490 atttgagagaacttatggaaacaactaatgacatgtgcataagttgttttcaccttatttccttaaactacctaggataacttatgaaaacatcttatag 8255391  T
Q  544 att 546  Q
    |||    
T  8255390 att 8255388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 11745658 - 11745740
Alignment:
Q  478 gtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtt 560  Q
    ||||||||||||||||| ||||| || ||||| |||  |||||||||||||||||||| || |||| | ||  ||||||||||    
T  11745658 gtttataagttgttttcagcttagtttcataagctcactaggatagcttataaaaacagcttatagctaatgggaaaacagtt 11745740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 627
Target Start/End: Complemental strand, 13459734 - 13459561
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    ||||||||||||||  |||||| || || ||||  ||||||| || ||||| ||||| |||| ||||||   |||| ||||||||| |||| ||||||      
T  13459734 aacttatgaaaacagcttatgacattttcataaactgttttcagcctattttcataagctctgtaggatgatttatgaaaacaacttatagcttatacac 13459635  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaa 627  Q
    ||| || ||| ||| |||||||||| | | ||||||||||||| | ||| | || |||||||||| | |||||||    
T  13459634 aaaaag-ttgacttcattttatcttttatcatagaaatagcttatacataattgcttatgctatacgctgcaaaa 13459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 20672823 - 20672757
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||| ||||| ||||| ||||||| |||||||| ||||| ||||  |||||||||||||||||||    
T  20672823 ttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 595
Target Start/End: Original strand, 34080311 - 34080389
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||| ||| |||||| || |||| |||||||  ||||||||| ||| |||||||||| ||||| |||||||||||    
T  34080311 aggatagcgtatgaaaacagcttatagcttatacggtaacagtttgacttcattttatcttttgttaaagaaatagctt 34080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 535
Target Start/End: Original strand, 29169115 - 29169160
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||    
T  29169115 ttttcggcttatttccataaactcttcaggataacttacaaaaaca 29169160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 595
Target Start/End: Original strand, 39866744 - 39866860
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttata--aaaacaactaatagattatacgaaaacag-tttgccttgattttatcttg 578  Q
    ||||| ||||||| | |||||| ||||| ||||| | |||||||||||  ||||||| | |||| || || |||||||| |||| ||| ||||||||||     
T  39866744 ataagctgttttcagtttattttcataagctcttcaagatagcttatatgaaaacaatttatagtttttatgaaaacagttttgactttattttatcttt 39866843  T
Q  579 tgttatagaaatagctt 595  Q
    ||||||||| |||||||    
T  39866844 tgttatagagatagctt 39866860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 595
Target Start/End: Original strand, 1470867 - 1470979
Alignment:
Q  483 taagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgtt 582  Q
    ||||||||||||  ||||||| | |||||| || | ||||| |||| |||||| || |||| ||||| ||||  | |||| ||| |||||||||| | ||    
T  1470867 taagttgttttcatcttattttcctaaacttttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttatt 1470966  T
Q  583 atagaaatagctt 595  Q
    |||||||||||||    
T  1470967 atagaaatagctt 1470979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 590
Target Start/End: Complemental strand, 3269706 - 3269646
Alignment:
Q  530 aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaat 590  Q
    ||||||||| ||||||||||| ||| || || | ||| |||||||||||||||||||||||    
T  3269706 aaaacaacttatagattatacaaaatcaattcgactttattttatcttgtgttatagaaat 3269646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 550
Target Start/End: Complemental strand, 8062389 - 8062321
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatac 550  Q
    ||||| ||||||| |||||||||||||| |||| || |||||||||| |||||| || |||| ||||||    
T  8062389 ataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttatac 8062321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 31705145 - 31705073
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaa 554  Q
    ||||| ||||||| |||||||||||||||||||  |||| ||||||| |||||| || |||| ||||| ||||    
T  31705145 ataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 589
Target Start/End: Original strand, 33714241 - 33714352
Alignment:
Q  477 tgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatct 576  Q
    |||| ||||| ||||||| ||||||||  |||| ||||    |||||||||| |||| | || ||||||| ||| |||| |||||| ||| |||||||||    
T  33714241 tgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaatagcttatagattgtac-aaaatagtttgactttattttatct 33714339  T
Q  577 tgtgttatagaaa 589  Q
    |||||||||||||    
T  33714340 tgtgttatagaaa 33714352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 528
Target Start/End: Original strand, 2458547 - 2458622
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    |||||||||| |||  |||||  ||||| ||||| ||||||| | |||||||||||| |||| |||||||||||||    
T  2458547 aacttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagcttat 2458622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 2493002 - 2492923
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||| ||||||||||||  |||||||||||||||| ||  |||| | ||||||||| ||||| | |||||| |||||||    
T  2493002 atgttcataagttgttttttgcttatttccataaaccctccaggacaacttataaaagcaacttacagattaaacgaaaa 2492923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 595
Target Start/End: Complemental strand, 26215494 - 26215443
Alignment:
Q  544 attatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||| |||||  ||| |||||||||| |||||||||||||||||    
T  26215494 attatacgaaaatagtttaactttattttatcttttgttatagaaatagctt 26215443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 595
Target Start/End: Complemental strand, 27465367 - 27465320
Alignment:
Q  548 tacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||    
T  27465367 tacgaaaacagtttgatttgattttatcttttgctatagaaatagctt 27465320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 543
Target Start/End: Complemental strand, 27754502 - 27754403
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatag 543  Q
    ||||| || |||||||||||||| ||||||| ||| ||||||||||  ||| |||||||| ||||| ||||  |  ||||||||| ||||| ||| ||||    
T  27754502 atttgggagaacttatgaaaacagtttatgacatgattataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaaccacttatag 27754403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 595
Target Start/End: Original strand, 33209268 - 33209343
Alignment:
Q  520 atagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||||||||||| | || |||| ||||| |||||||||| | ||| ||||||||||   |||||||||||||||    
T  33209268 atagcttataaaaatagcttatagtttatatgaaaacagttcgactttattttatctttcattatagaaatagctt 33209343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 595
Target Start/End: Original strand, 39561557 - 39561664
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttataga 587  Q
    ||||||| |||||||||||||| || || | |||||||||  ||||||||| |||| ||| | |||||||  | | ||| |||||||  | |||||||||    
T  39561557 tgttttcagcttatttccataagcttttcatgatagcttacgaaaacaacttatagtttagatgaaaacaaatcgactttattttatactttgttataga 39561656  T
Q  588 aatagctt 595  Q
    ||||||||    
T  39561657 aatagctt 39561664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 583
Target Start/End: Original strand, 41620275 - 41620402
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||| |||||| |||||| ||||  ||||||||||||| |||||||| || || |||   | ||||||||||||||||| ||  |||| |||| ||| |    
T  41620275 ttatggaaacaaattatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaacagcttttagaatatatgaaca 41620374  T
Q  556 cagtttgccttgattttatcttgtgtta 583  Q
     | |||| ||| |||||||||| |||||    
T  41620375 taatttgactttattttatcttttgtta 41620402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 562
Target Start/End: Original strand, 43704366 - 43704468
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagct--tataaaaacaactaatagattatacgaaaacagt 559  Q
    |||||| |||||| ||||| ||||  ||||||  |||||||||||||| || || |||||| ||  ||| ||||||||| |||| ||||| |||||||||    
T  43704366 aaacaacttatgacatgttcataaactgttttaagcttatttccataagcttttgaggataactcttatgaaaacaacttatagtttatatgaaaacagt 43704465  T
Q  560 ttg 562  Q
    |||    
T  43704466 ttg 43704468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 7424734 - 7424688
Alignment:
Q  457 tatgaaaacaatttatgaaatgtttataagttgttttcggcttattt 503  Q
    ||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  7424734 tatgagaacaaattatgacatgtttataagttgttttgggcttattt 7424688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 591
Target Start/End: Complemental strand, 8799430 - 8799356
Alignment:
Q  517 aggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||||||||||||||||||| || |||  ||||  | ||| |||||| ||| |||||||||| |||||||||||||    
T  8799430 aggatagcttataaaaacaccttataatttatctggaaatagtttgactttattttatcttttgttatagaaata 8799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 590
Target Start/End: Complemental strand, 10437934 - 10437837
Alignment:
Q  492 ttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaat 590  Q
    ||||||||||||| |||| ||||  | |||||||||| ||| | ||| | || |||||  ||||||||||| ||| |||||||||| ||||||||||||    
T  10437934 ttcggcttatttctataagctctcgaagatagcttatgaaacctacttaaagcttatat-aaaacagtttgactttattttatcttttgttatagaaat 10437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 595
Target Start/End: Complemental strand, 13652276 - 13652162
Alignment:
Q  481 tataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    |||||| |||||||  ||||||||| ||| ||||  || ||||||||||||||||| | |||  ||||| ||||||| |||  ||| |||  ||||| ||    
T  13652276 tataagctgttttctacttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttg 13652177  T
Q  581 ttatagaaatagctt 595  Q
     ||||||||||||||    
T  13652176 ctatagaaatagctt 13652162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 595
Target Start/End: Complemental strand, 13710919 - 13710805
Alignment:
Q  481 tataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    |||||| |||||||  ||||||||| ||| ||||  || ||||||||||||||||| | |||  ||||| ||||||| |||  ||| |||  ||||| ||    
T  13710919 tataagctgttttctacttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttg 13710820  T
Q  581 ttatagaaatagctt 595  Q
     ||||||||||||||    
T  13710819 ctatagaaatagctt 13710805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 453 - 626
Target Start/End: Complemental strand, 34849193 - 34849020
Alignment:
Q  453 aacttatgaaaacaa-tttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacg 551  Q
    |||| |||||||||| ||||||| ||||| |||||  |||||| ||| ||||||||||  |||  | || ||||||| | |||| || |||  ||||||     
T  34849193 aactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttccataagttctacaagaaagcttatgataacagcttatatcttataca 34849094  T
Q  552 aaaacagtttgccttgattttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaa 626  Q
    |||| | | || ||| |||||||||||||  | ||||||| ||| ||||| ||||||||||||||| | ||||||    
T  34849093 aaaataatgtgactttattttatcttgtgcaaaagaaatatcttattcat-agtgtttatgctataagctgcaaa 34849020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 522
Target Start/End: Original strand, 41606891 - 41606953
Alignment:
Q  460 gaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggata 522  Q
    |||||||  |||||| ||||| | ||||||||||| |||||||||||||| |||| |||||||    
T  41606891 gaaaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 555
Target Start/End: Original strand, 44865589 - 44865647
Alignment:
Q  497 cttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    |||||||||||||||||| ||| ||||||||||||| || || |||| ||||| |||||    
T  44865589 cttatttccataaactctctagtatagcttataaaaccagcttatagcttatatgaaaa 44865647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 489 - 595
Target Start/End: Original strand, 3537046 - 3537154
Alignment:
Q  489 gttttcggcttatttccataaactctttaggatagcttata--aaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatag 586  Q
    |||||| ||||||||||||||  |||  | |||| ||||||  | ||||||  |||| ||||||||||||| |||| ||| |||||||||| || |||||    
T  3537046 gttttcagcttatttccataagttctccaagatatcttatatgataacaacctatagcttatacgaaaacaatttgactttattttatcttttgctatag 3537145  T
Q  587 aaatagctt 595  Q
    |||| ||||    
T  3537146 aaattgctt 3537154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 587
Target Start/End: Complemental strand, 7714322 - 7714197
Alignment:
Q  462 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagttt 561  Q
    |||||| |||||||||||  || || |||||||  ||||||| ||| | ||||  | ||||||| || ||||||||| |||| | ||| |||||||| |     
T  7714322 aaacaacttatgaaatgtcgatgagctgttttcaacttattttcatgagctctccaagatagctcatgaaaacaacttatagttgatatgaaaacagctc 7714223  T
Q  562 gccttgattttatcttgtgttataga 587  Q
     |||| |||||||||| |||||||||    
T  7714222 acctttattttatcttttgttataga 7714197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 8629553 - 8629504
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttc 494  Q
    ||||||| ||||||||||||||| |||||| ||| | |||||||||||||    
T  8629553 tttgagagaacttatgaaaacaacttatgacatgatcataagttgttttc 8629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 574
Target Start/End: Original strand, 11813086 - 11813207
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||||||| ||||||||||||| || |  ||| | ||||||| |||||||||  ||| ||||| | |||||||||| ||||||  | ||| |||||| |     
T  11813086 aacttatggaaacaatttatgacatatccataggctgttttcagcttatttctgtaagctcttgaagatagcttatgaaaacagattataaattatatgg 11813185  T
Q  553 aaacagtttgccttgattttat 574  Q
    ||||||||| | || |||||||    
T  11813186 aaacagttttcttttattttat 11813207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 630
Target Start/End: Original strand, 16163375 - 16163436
Alignment:
Q  569 ttttatcttgtgttatagaaatagctttttcattagtgtttatgctatatgttgcaaaataa 630  Q
    |||||||||  |||||||||||||||| | ||| |||| |||||||||| | ||||||||||    
T  16163375 ttttatctttagttatagaaatagcttatacataagtggttatgctataggctgcaaaataa 16163436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Original strand, 25869263 - 25869308
Alignment:
Q  469 ttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    |||||| ||||  ||||||||||||| |||||||||||||||||||    
T  25869263 ttatgacatgtccataagttgttttcagcttatttccataaactct 25869308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 595
Target Start/End: Complemental strand, 30013270 - 30013166
Alignment:
Q  490 ttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaa 589  Q
    ||||| |||||||||||| |  |||  |||||||||||| |||||| || |||| ||||| | |||||||||| ||| |||| | ||| ||||||| |||    
T  30013270 ttttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgacttaatttgaccttttgttata-aaa 30013172  T
Q  590 tagctt 595  Q
    ||||||    
T  30013171 tagctt 30013166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 509
Target Start/End: Complemental strand, 30259212 - 30259147
Alignment:
Q  444 atttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataa 509  Q
    |||||||| | |||||| |||||  |||||| |||| |||||||||||||| | ||||||||||||    
T  30259212 atttgagagagcttatggaaacagcttatgatatgtctataagttgttttcagtttatttccataa 30259147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 30918209 - 30918141
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 514  Q
    ||||||| | ||||||||||||| || ||| || || ||||||||||||| |||||||||||||| ||||    
T  30918209 tttgagagagcttatgaaaacaacttgtgacat-ttcataagttgttttcagcttatttccataagctct 30918141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 549
Target Start/End: Original strand, 37776712 - 37776781
Alignment:
Q  480 ttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattata 549  Q
    |||||||||||| || |||||||||||||||||||| | ||| ||| ||  |||||||| |||| |||||    
T  37776712 ttataagttgttatcagcttatttccataaactcttcaagattgctgatgtaaacaacttatagtttata 37776781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 41336650 - 41336763
Alignment:
Q  477 tgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatct 576  Q
    |||||||||||||||||| ||||||||||  || ||||    |||||||||| ||||||| |  ||| ||||| ||||||| |||| ||  |||||||||    
T  41336650 tgtttataagttgttttcagcttatttccgcaagctctcctagatagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatct 41336749  T
Q  577 tgtgttatagaaat 590  Q
    | ||| ||| ||||    
T  41336750 tttgtcataaaaat 41336763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 573
Target Start/End: Original strand, 42215086 - 42215182
Alignment:
Q  476 atgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgatttta 573  Q
    ||||| ||||||||||||| |||||||| ||||| ||||  | |||||||||| ||||  | | |||||| ||||||||||| |||| ||| ||||||    
T  42215086 atgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa-tatttatagatgatacgaaaacaatttgactttatttta 42215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 43368683 - 43368756
Alignment:
Q  455 cttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||||||||| |||||| ||||| || || | |||||  ||||||| ||| |||||||||||| |||||||    
T  43368683 cttatgaaaacaacttatgacatgttcattagctattttcaacttattttcatgaactctttaggacagcttat 43368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 503 - 591
Target Start/End: Complemental strand, 4763957 - 4763869
Alignment:
Q  503 tccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaata 591  Q
    ||||||| ||||| ||||||||||| ||||||| || |||| ||||  |||||| |||||  || |||||||||| |||| | ||||||    
T  4763957 tccataagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatcttttgttgtcgaaata 4763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 545 - 593
Target Start/End: Original strand, 10079136 - 10079184
Alignment:
Q  545 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagc 593  Q
    |||||||||||||||||| ||| |||||||||| | | |||||||||||    
T  10079136 ttatacgaaaacagtttgacttcattttatcttttatcatagaaatagc 10079184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 453 - 505
Target Start/End: Original strand, 27119910 - 27119962
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttcc 505  Q
    ||||||||||||| | | |||| |||| |||||||||||||| ||||||||||    
T  27119910 aacttatgaaaaccactaatgacatgtctataagttgttttcagcttatttcc 27119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 30389170 - 30389106
Alignment:
Q  471 atgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaaca 535  Q
    |||| ||||| ||||||||||||| |||||||| |||||  ||| ||||| ||||||| ||||||    
T  30389170 atgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaaca 30389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 499 - 595
Target Start/End: Original strand, 30627929 - 30628025
Alignment:
Q  499 tatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    ||||||||||| |||| || |||| ||||| ||||||||| |||| ||| ||  ||||| |||   || |||||||||| ||||| |||||||||||    
T  30627929 tatttccataagctctctaagataacttatgaaaacaacttatagcttacacataaacaattttattttattttatcttttgttacagaaatagctt 30628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 32840966 - 32841022
Alignment:
Q  453 aacttatgaaaacaatttatgaaat-gtttataagttgttttcggcttatttccata 508  Q
    ||||||||||||||| |||||| || ||| ||||||||||||| |||||||| ||||    
T  32840966 aacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 488 - 528
Target Start/End: Original strand, 42370377 - 42370417
Alignment:
Q  488 tgttttcggcttatttccataaactctttaggatagcttat 528  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  42370377 tgttttcagcttatttccataaactcttcatgatagcttat 42370417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 523 - 595
Target Start/End: Complemental strand, 42597420 - 42597348
Alignment:
Q  523 gcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 595  Q
    |||||| ||||||||| |||| ||  | ||||||| |||  ||| |||||||||| |||||||||||||||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagctt 42597348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 159954 - 160092
Alignment:
Q  453 aacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacga 552  Q
    |||| ||| ||||| ||||||| |||| ||||||  |||||| ||||||||||| || |||||||||||||||||| |||||| || |||  ||||| |     
T  159954 aactaatggaaacagtttatgacatgtctataagcagttttcagcttatttccacaagctctttaggatagcttatgaaaacatcttataacttatatg- 160052  T
Q  553 aaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    |  ||||||| ||| |||||||||| || ||||| |||||    
T  160053 attcagtttgactttattttatcttttgctataggaatag 160092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 591
Target Start/End: Complemental strand, 27637 - 27527
Alignment:
Q  481 tataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtg 580  Q
    |||||||||||||| ||||||||||| |  ||    | ||||| |||| ||||||||| |||| ||||| ||||||| |||| ||| |||||||||| ||    
T  27637 tataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctg 27538  T
Q  581 ttatagaaata 591  Q
    |||||||||||    
T  27537 ttatagaaata 27527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 592
Target Start/End: Complemental strand, 20197 - 20129
Alignment:
Q  524 cttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatag 592  Q
    ||||| |||||||||||||| ||||| || ||| ||||| ||| ||||||||||  |||||||||||||    
T  20197 cttatgaaaacaactaatagcttatatgataactgtttgactttattttatctttggttatagaaatag 20129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 143109 - 143183
Alignment:
Q  519 gatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagct 594  Q
    |||||||||| ||| || || |||| |||||| ||| ||||||| | | |||||||||||||||||||||||||||    
T  143109 gatagcttatgaaatcagcttataggttatac-aaagcagtttgacattattttatcttgtgttatagaaatagct 143183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 10590 - 10656
Alignment:
Q  445 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaac 511  Q
    ||||| ||| |||||| |||||| | |||| ||||  ||||||||||||| ||||||||||||||||    
T  10590 tttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataaac 10656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 533
Target Start/End: Complemental strand, 32818 - 32756
Alignment:
Q  471 atgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaa 533  Q
    |||| ||||| |||| | ||||||  |||||||| ||||||||| ||||||||||||||||||    
T  32818 atgacatgttaataattggttttcaacttatttctataaactctgtaggatagcttataaaaa 32756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 592
Target Start/End: Original strand, 4207 - 4344
Alignment:
Q  456 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaactaatagattatacgaaaa 555  Q
    ||||| |||||| ||||| | |||  ||||||||||||   ||| ||||| ||| || | ||| ||||||||| |||||| || |||| ||||| |||||    
T  4207 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccgtaagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 4306  T
Q  556 cagtttgccttgattttatct-tgtgttatagaaatag 592  Q
    | ||||| ||| ||||||||| | | ||||||||||||    
T  4307 cggtttgactttattttatctcttttttatagaaatag 4344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 538
Target Start/End: Complemental strand, 306386 - 306330
Alignment:
Q  482 ataagttgttttcggcttatttccataaactctttaggatagcttataaaaacaact 538  Q
    ||||| ||||||| ||||| || ||||| |||| ||||||||||||| |||||||||    
T  306386 ataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaact 306330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University