View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8985_low_2 (Length: 954)

Name: NF8985_low_2
Description: NF8985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8985_low_2
NF8985_low_2
[»] chr4 (8 HSPs)
chr4 (20-945)||(2887494-2888418)
chr4 (20-523)||(2896357-2896860)
chr4 (590-873)||(2896021-2896304)
chr4 (591-849)||(2878562-2878820)
chr4 (20-117)||(2877971-2878068)
chr4 (362-526)||(2878314-2878478)
chr4 (218-282)||(2878176-2878240)
chr4 (58-111)||(51049755-51049808)
[»] chr2 (12 HSPs)
chr2 (610-825)||(44232830-44233045)
chr2 (608-825)||(44209809-44210026)
chr2 (608-825)||(44222004-44222221)
chr2 (193-282)||(44233375-44233464)
chr2 (193-303)||(44222534-44222644)
chr2 (190-277)||(44210359-44210446)
chr2 (383-469)||(44222379-44222465)
chr2 (19-111)||(44210552-44210644)
chr2 (19-111)||(44233574-44233666)
chr2 (28-111)||(44222752-44222835)
chr2 (383-486)||(44210161-44210264)
chr2 (383-469)||(44233199-44233285)
[»] chr7 (23 HSPs)
chr7 (19-110)||(1084415-1084506)
chr7 (19-110)||(39537613-39537704)
chr7 (43-109)||(42141748-42141814)
chr7 (43-109)||(42153550-42153616)
chr7 (19-110)||(39547078-39547169)
chr7 (707-753)||(39339867-39339913)
chr7 (707-753)||(39354688-39354734)
chr7 (25-110)||(39366581-39366666)
chr7 (409-465)||(39573967-39574023)
chr7 (19-110)||(39339152-39339243)
chr7 (714-753)||(39563086-39563125)
chr7 (31-109)||(42132579-42132657)
chr7 (705-753)||(39573625-39573673)
chr7 (40-112)||(39588789-39588861)
chr7 (19-110)||(39353995-39354086)
chr7 (19-110)||(39563709-39563800)
chr7 (392-446)||(39339556-39339610)
chr7 (392-446)||(39354397-39354451)
chr7 (719-753)||(39367301-39367335)
chr7 (707-753)||(39546293-39546339)
chr7 (43-109)||(42171388-42171454)
chr7 (409-446)||(39588464-39588501)
chr7 (715-764)||(39620948-39620997)
[»] chr1 (3 HSPs)
chr1 (19-117)||(2160216-2160314)
chr1 (25-112)||(19543295-19543382)
chr1 (31-113)||(25986620-25986702)
[»] chr8 (1 HSPs)
chr8 (31-111)||(4501784-4501864)
[»] chr3 (3 HSPs)
chr3 (19-110)||(49773652-49773743)
chr3 (37-110)||(25522821-25522894)
chr3 (31-109)||(12717006-12717084)
[»] chr6 (1 HSPs)
chr6 (31-109)||(10901718-10901796)
[»] chr5 (1 HSPs)
chr5 (31-107)||(29777510-29777586)
[»] scaffold0210 (1 HSPs)
scaffold0210 (31-109)||(8841-8919)


Alignment Details
Target: chr4 (Bit Score: 878; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 878; E-Value: 0
Query Start/End: Original strand, 20 - 945
Target Start/End: Original strand, 2887494 - 2888418
Alignment:
Q  20 gaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaatga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2887494 gaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaatga 2887593  T
Q  120 tttgttggtaaaaaatgtgttttctttttcttccgcttttggactcgaaataacatacattatttattccagttattcctcatgaaacgcggaggagaag 219  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2887594 tttgttggtaaaaaatgcgttttctttttcttcctcttttggactcgaaataacatacattatatattccagttattcctcatgaaacgcggaggagaag 2887693  T
Q  220 aaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttatatttaatattacttttagacaaaataaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2887694 aaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttatatttaatattacttttagacaaaataaa 2887793  T
Q  320 taaattatagtggatagctataattctacttggaagattatcttctaatattttctgttgtttagagcattgaaggggttagtaaaatcaaagatggcta 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2887794 taaattatagtggatagctataattctacttggaagattatcttctaatattttctgttgtttagagcattgaaggggttagtaaaatcaaagatggcta 2887893  T
Q  420 taatccagcaacttggatgttggaagtttcgagttcagcacaagaacttactttaggaattgattttcatcatgcatacaaaaattctgagttgtacagg 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2887894 taatccagcaacttggatgttggaagtttcgagttcagcacaagaacttactctaggaattgattttcatcatgcatacaaaaattctgagttgtacagg 2887993  T
Q  520 taagaaaatttatttgaaaatatggattaataattatagtaccaactatgatcatattggaaaaagacctcactgttataaactattgttcaggagaaac 619  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2887994 taagcaaatttatttgaaaatatggattcataatt-tagtaccaactatgatcatattggaaaaagacctcactgttataaactattgttcaggagaaac 2888092  T
Q  620 aagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtccaatgtttggctt 719  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2888093 aagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtccaatgtttggctt 2888192  T
Q  720 gcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtttggaacaatatt 819  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2888193 gcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtttggaacaatatt 2888292  T
Q  820 ttgggatcttggaaggaaatagtaagtgaactttcattatctgaaaaataagaactaaactattagagttaagtcagcttttctttccaactcaagttct 919  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2888293 ttgggatcttggaaggaaatagtaagtgaactttcattatctgaaaaataagaactaaactattagagttaagtcagcttttctttccaactcgagttct 2888392  T
Q  920 aacctcttttgttgatgtccatctca 945  Q
    ||||||||||||| || |||| ||||    
T  2888393 aacctcttttgttcatttccagctca 2888418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 20 - 523
Target Start/End: Complemental strand, 2896860 - 2896357
Alignment:
Q  20 gaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaatga 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2896860 gaacagttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaatga 2896761  T
Q  120 tttgttggtaaaaaatg-tgttttctttttcttccgcttttggactcgaaataac-----atacattatttattccagttattcctcatgaaacgcggag 213  Q
    |||  || ||||||||  |||||| |  |||||||  || || ||| ||| | ||     ||| || |||| ||  ||||| |||| ||||| |||||||    
T  2896760 ttt--tgataaaaaatcatgttttatgattcttccttttctgtacttgaactgacctaatataaatgatttcttttagttactcctaatgaagcgcggag 2896663  T
Q  214 gagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttatatttaatattacttttagacaa 313  Q
    || |||||| ||||||||| ||  ||||||||||||| | |||||||||||||||||||||||||||||| ||  |  ||| ||||||  |||||| |      
T  2896662 gacaagaaacatatgttgggccattgggtcgtcattccaatcaattgatcaagtattttgaggttggatgaaaagtgcattcaatattgtttttagtctg 2896563  T
Q  314 aataaataaattatagtggatagctataattctacttggaagattatcttctaatattttctgttgttt-agagcattgaaggggttagtaaaatcaaag 412  Q
    ||     | |||| ||| |||| | ||||||||  |||| || | || | ||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  2896562 aa-----atattaaagttgataaccataattcttgttggtagctaatatgctaatattttctgttgttttagagcatcgaaggggttagtaaaattaaag 2896468  T
Q  413 atggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaacttactttaggaattgattttcatcatgcatacaaaaattctgagtt 512  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||  ||||||||||| ||  ||||||||||||||||||    
T  2896467 atggctataatccagcaacttggatgttggaagttacaagttcagcacaagaacatactttaggtgttgattttcatgatatatacaaaaattctgagtt 2896368  T
Q  513 gtacaggtaag 523  Q
    |||||||||||    
T  2896367 gtacaggtaag 2896357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 590 - 873
Target Start/End: Complemental strand, 2896304 - 2896021
Alignment:
Q  590 cactgttataaactattgttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatact 689  Q
    ||||| ||||||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||| ||||||| ||||||||||    
T  2896304 cactgatataaactattctttaggagaaacaagcaacttatagtagaattaggcaaacctgctcctggttctaaggatcttcatttctccgcccaatact 2896205  T
Q  690 cacaatcatttttagtccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgt 789  Q
    ||||||||||||   ||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||      
T  2896204 cacaatcattttggatccaatgcttggcttgcctatggaaacaacattggtcatactggcgcaatccgccatacactgctgtgaggtttttcttcactac 2896105  T
Q  790 tttcataggcttgatgtttggaacaatattttgggatcttggaaggaaatagtaagtgaactttcattatctgaaaaataagaa 873  Q
    ||||||||  ||||||||||||||||| || ||| | |||||||||||||||||||||||  |||||||| |||||||||||||    
T  2896104 tttcatagcattgatgtttggaacaatgttctggaaccttggaaggaaatagtaagtgaaacttcattatgtgaaaaataagaa 2896021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 591 - 849
Target Start/End: Original strand, 2878562 - 2878820
Alignment:
Q  591 actgttataaactattgttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactc 690  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||| || |||||||| | |||||| || |||||||||||| ||  |||||||||    
T  2878562 actgttatacactattgttcaggagaaataagcaacttatagaagaattgggaaaacctgctcttggttccaaggatctttatttccctagccaatactc 2878661  T
Q  691 acaatcatttttagtccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgtt 790  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||||| |||  ||  |    
T  2878662 acaatcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctact 2878761  T
Q  791 ttcataggcttgatgtttggaacaatattttgggatcttggaaggaaatagtaagtgaa 849  Q
    |||||||  ||||||||||||||||| |||||||| || ||| | ||||||||||||||    
T  2878762 ttcatagcattgatgtttggaacaatgttttgggacctcggacgcaaatagtaagtgaa 2878820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 2877971 - 2878068
Alignment:
Q  20 gaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  2877971 gaaccgttaggaacacggttgacacaggaagaacagttgtttgtaccattcatcaaccaagtatcgacatatttgaatcttttgatgaggtaagaaat 2878068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 362 - 526
Target Start/End: Original strand, 2878314 - 2878478
Alignment:
Q  362 ttctaatattttctgttgtttagagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcaca 461  Q
    |||| ||||||||| |||| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| |||||||| |||||  ||||| |||||||    
T  2878314 ttcttatattttctattgtctagagtattgaaggagtaagtaaaataaacgatggatataacccagcaacatggatgttagaagtgacgagtccagcaca 2878413  T
Q  462 agaacttactttaggaattgattttcatcatgcatacaaaaattctgagttgtacaggtaagaaa 526  Q
    |||| || | |||||   |||||||||| |   |||||||||||||||| | || ||||||||||    
T  2878414 agaagttgcattaggtgctgattttcatgagatatacaaaaattctgagctatataggtaagaaa 2878478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 2878176 - 2878240
Alignment:
Q  218 agaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggat 282  Q
    ||||||||||| ||| ||  | |||||| |||||| ||||||||||||||| |||||||||||||    
T  2878176 agaaatatatgctgggccattaggtcgttattctaatcaattgatcaagtactttgaggttggat 2878240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 51049755 - 51049808
Alignment:
Q  58 gtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggta 111  Q
    ||||||||||| |||||||||||||| || ||||| ||  ||||||||||||||    
T  51049755 gtttgcaccatacatcaaccaagtatcgatatatttgagacttttgatgaggta 51049808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 2e-39; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 610 - 825
Target Start/End: Complemental strand, 44233045 - 44232830
Alignment:
Q  610 caggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtccaa 709  Q
    |||||||||||||||||||||  ||||| |  ||  |||||| ||||||||||| |||||| ||||| || | |||| ||| || || || || ||||||    
T  44233045 caggagaaacaagcaacttattcaagaacttagcgtacctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggtccaa 44232946  T
Q  710 tgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtttg 809  Q
    ||   ||| |||||||||||||||| ||||||||||||||| || || ||||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  44232945 tgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcactacattcataggcttgatgtttg 44232846  T
Q  810 gaacaatattttggga 825  Q
    ||||||| || |||||    
T  44232845 gaacaatgttctggga 44232830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 608 - 825
Target Start/End: Complemental strand, 44210026 - 44209809
Alignment:
Q  608 ttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtcc 707  Q
    |||||||||||||||||||||||  ||||| | |||   ||||| ||||||||||| |||||| ||||| || | |||| ||| || || || || ||||    
T  44210026 ttcaggagaaacaagcaacttattcaagaacttggcgtgcctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggtcc 44209927  T
Q  708 aatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtt 807  Q
    ||||   ||| |||||||||||||||| ||||||||||||||| || || ||||||||| |||||||||||||||||||    ||||||| |||||||||    
T  44209926 aatgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcacgacattcatagccttgatgtt 44209827  T
Q  808 tggaacaatattttggga 825  Q
    ||||||||| || |||||    
T  44209826 tggaacaatgttctggga 44209809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 608 - 825
Target Start/End: Complemental strand, 44222221 - 44222004
Alignment:
Q  608 ttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtcc 707  Q
    |||||||||||||||||||||||  ||||| |  ||   ||||| ||||||||||| |||||| ||||| || | |||| ||| || || || || || |    
T  44222221 ttcaggagaaacaagcaacttattcaagaacttagcgtgcctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggttc 44222122  T
Q  708 aatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtt 807  Q
    ||||   ||| |||||||||||||||| ||||||||||||||| || || ||||||||| ||||||||||||||||||||   |||||||||||||||||    
T  44222121 aatgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcactaccttcataggcttgatgtt 44222022  T
Q  808 tggaacaatattttggga 825  Q
    ||||||||| || |||||    
T  44222021 tggaacaatgttctggga 44222004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 44233464 - 44233375
Alignment:
Q  193 tattcctcatgaaacgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggat 282  Q
    ||||||| |||||||| |||||| |||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||| ||||    
T  44233464 tattccttatgaaacgtggaggacaagaaatatatgttggaccattgggtcgtcattctactcatttgatcaagtattttgaggtaggat 44233375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 44222644 - 44222534
Alignment:
Q  193 tattcctcatgaaacgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttata 292  Q
    ||||||| ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||| |||| | ||||       
T  44222644 tattccttatgaagcgtggaggacaagaaatatatgttggaccactgggtcgtcattctactcatttgatcaagtatttcgaggtaggatcctactttag 44222545  T
Q  293 tttaatattac 303  Q
    |||||||||||    
T  44222544 tttaatattac 44222534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 44210446 - 44210359
Alignment:
Q  190 agttattcctcatgaaacgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggt 277  Q
    |||||||||| |||||||| |||||| | |||||||||||||||||  ||||||||||||||| ||| |||||||||||||| |||||    
T  44210446 agttattccttatgaaacgtggaggacaggaaatatatgttggaccattgggtcgtcattctactcatttgatcaagtatttcgaggt 44210359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 383 - 469
Target Start/End: Complemental strand, 44222465 - 44222379
Alignment:
Q  383 agagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaactta 469  Q
    |||||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||||||||| | | | |||||||||||||||    
T  44222465 agagcattgacggagttagtaaaatcaaagatggatataacccagcaacatggatgttggaagttacaactacagcacaagaactta 44222379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 44210644 - 44210552
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggta 111  Q
    ||||| || |||||||| || |||||||||||||||||||| || ||||| |||||||| || ||||||||||| ||||| ||||||||||||    
T  44210644 agaactgtaaggaacacagtggacacaggaagaacagttgtgtgtaccatccatcaacctagcattgacatatttgaagcatttgatgaggta 44210552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 44233666 - 44233574
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggta 111  Q
    ||||| || |||||||| || |||||||||||||||||||| || ||||| ||||| || || ||||||||||| ||||| ||||||||||||    
T  44233666 agaactgtaaggaacacagtggacacaggaagaacagttgtgtgtaccatccatcagcctagcattgacatatttgaagcatttgatgaggta 44233574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 44222835 - 44222752
Alignment:
Q  28 aggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggta 111  Q
    |||||||| || ||||| |||||||||||||| || ||||| |||||||| || ||||||||||| ||||| ||||||||||||    
T  44222835 aggaacacagtggacacgggaagaacagttgtgtgtaccatccatcaacctagcattgacatatttgaagcatttgatgaggta 44222752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 383 - 486
Target Start/End: Complemental strand, 44210264 - 44210161
Alignment:
Q  383 agagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaacttactttaggaattga 482  Q
    |||||||||| || || |||||||||||||| || ||||| |||||||| ||||||||||||||| | | | | ||||||||||||| ||| ||  ||||    
T  44210264 agagcattgacggagtgagtaaaatcaaagacggatataacccagcaacatggatgttggaagttacaactaccgcacaagaacttaatttgggtgttga 44210165  T
Q  483 tttt 486  Q
    ||||    
T  44210164 tttt 44210161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 469
Target Start/End: Complemental strand, 44233285 - 44233199
Alignment:
Q  383 agagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaactta 469  Q
    |||||||||| || || |||||||||||||| || ||||| |||||||| ||||||||||||||| | | | | |||||||||||||    
T  44233285 agagcattgacggagtgagtaaaatcaaagacggatataacccagcaacatggatgttggaagttacaactaccgcacaagaactta 44233199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 3e-20; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 1084506 - 1084415
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| ||||||| ||| || ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||    
T  1084506 agaacagttaggagcacagtagacactggaagaactgttgtttgcaccatccatcaaccaagtattgatatatttgaatcttttgatgaggt 1084415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 39537704 - 39537613
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| ||||||||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||||| ||||| ||| |||||||||||||    
T  39537704 agaacagttaggaacacagtagacactggaagaacagttgtttgtaccattcaccaacctagcattgatatatttgaatcttttgatgaggt 39537613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 42141814 - 42141748
Alignment:
Q  43 acaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||    
T  42141814 acagggagaactgttgtttgcacaattcatcaaccaagtatagacatttttgaagcttttgatgagg 42141748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 42153616 - 42153550
Alignment:
Q  43 acaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||    
T  42153616 acagggagaactgttgtttgcacaattcatcaaccaagtatagacatttttgaagcttttgatgagg 42153550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 39547169 - 39547078
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| ||||||||||| || ||||| ||||||||||||||||| ||||| || || || || ||||| ||||| ||| |||||||||||||    
T  39547169 agaacagttaggaacacagtagacaccggaagaacagttgtttgtaccatccaccagcctagcattgatatatttgaatcttttgatgaggt 39547078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 753
Target Start/End: Original strand, 39339867 - 39339913
Alignment:
Q  707 caatgtttggcttgcttatggaaacaacattggtcatattggcgcaa 753  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  39339867 caatgtatggcttgcttatggaaacaacattggtcttattggcgcaa 39339913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 753
Target Start/End: Original strand, 39354688 - 39354734
Alignment:
Q  707 caatgtttggcttgcttatggaaacaacattggtcatattggcgcaa 753  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  39354688 caatgtatggcttgcttatggaaacaacattggtcttattggcgcaa 39354734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 39366581 - 39366666
Alignment:
Q  25 gttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||| || || || || ||||| ||||| ||| |||||||||||||    
T  39366581 gttaggaacacagttgacaccggaagaactgttgtttgtaccatccaccagcctagcattgatatatttgaatcttttgatgaggt 39366666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 39574023 - 39573967
Alignment:
Q  409 aaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaa 465  Q
    ||||||||||| ||||||||||||||||||||||||||| | || |||||| |||||    
T  39574023 aaagatggctacaatccagcaacttggatgttggaagttactagctcagcaaaagaa 39573967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 39339152 - 39339243
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| ||||||||||| || ||||| ||||||||||||||||| || || || || || || ||||| ||||| ||| |||||||||||||    
T  39339152 agaacagttaggaacacagtagacactggaagaacagttgtttgtacaatccaccagcctagcattgatatatttgaatcttttgatgaggt 39339243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 714 - 753
Target Start/End: Complemental strand, 39563125 - 39563086
Alignment:
Q  714 tggcttgcttatggaaacaacattggtcatattggcgcaa 753  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  39563125 tggcttgcttatggaaacaacattggtcttattggcgcaa 39563086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 42132657 - 42132579
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || || ||||||||||||||||    
T  42132657 aacacagtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatatttttgaagcttttgatgagg 42132579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 705 - 753
Target Start/End: Complemental strand, 39573673 - 39573625
Alignment:
Q  705 tccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaa 753  Q
    |||||||| ||||||| |||||||||||||||||||| || ||||||||    
T  39573673 tccaatgtatggcttgtttatggaaacaacattggtcttactggcgcaa 39573625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 39588861 - 39588789
Alignment:
Q  40 gacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaa 112  Q
    ||||||||||||||| ||||||| ||||||||||| || || ||| | ||||| ||| ||||||| |||||||    
T  39588861 gacacaggaagaacaattgtttgtaccattcatcagcccagcattcatatatttgaatcttttgacgaggtaa 39588789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 39353995 - 39354086
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| ||||| ||||| || || |||||||||||||||||||| || || || || || || ||||| ||||| ||| |||||||||||||    
T  39353995 agaacagttagaaacacagtagatacaggaagaacagttgtttgtacaatccaccagcctagcattgatatatttgaatcttttgatgaggt 39354086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 39563800 - 39563709
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| ||||||||||| ||  |||| ||||||||||||||||| || || || || || || ||||| ||||| ||| |||||||||||||    
T  39563800 agaacagttaggaacacagtaaacactggaagaacagttgtttgtactatccaccagcctagcattgatatatttgaatcttttgatgaggt 39563709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 39339556 - 39339610
Alignment:
Q  392 aaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagt 446  Q
    |||| ||||| || |||||||| || |||||||||||||| ||||||||||||||    
T  39339556 aaggtgttagcaagatcaaagacggttataatccagcaacatggatgttggaagt 39339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 39354397 - 39354451
Alignment:
Q  392 aaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagt 446  Q
    |||| ||||| || |||||||| || |||||||||||||| ||||||||||||||    
T  39354397 aaggtgttagaaagatcaaagacggttataatccagcaacatggatgttggaagt 39354451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 719 - 753
Target Start/End: Original strand, 39367301 - 39367335
Alignment:
Q  719 tgcttatggaaacaacattggtcatattggcgcaa 753  Q
    ||||||||||||||||||||||| |||||||||||    
T  39367301 tgcttatggaaacaacattggtcttattggcgcaa 39367335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 707 - 753
Target Start/End: Complemental strand, 39546339 - 39546293
Alignment:
Q  707 caatgtttggcttgcttatggaaacaacattggtcatattggcgcaa 753  Q
    |||||| ||||||| |||||||||||||||||||| || ||||||||    
T  39546339 caatgtatggcttgtttatggaaacaacattggtcttactggcgcaa 39546293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 42171454 - 42171388
Alignment:
Q  43 acaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| ||||| ||||||||||| |||||||||||||| |  || || || ||||||||||||||||    
T  42171454 acagggagaactgttgtttgcacaattcatcaaccaagcacggatatttttgaagcttttgatgagg 42171388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 409 - 446
Target Start/End: Complemental strand, 39588501 - 39588464
Alignment:
Q  409 aaagatggctataatccagcaacttggatgttggaagt 446  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  39588501 aaagatggatataatccagcaacttggattttggaagt 39588464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 764
Target Start/End: Complemental strand, 39620997 - 39620948
Alignment:
Q  715 ggcttgcttatggaaacaacattggtcatattggcgcaacccgccataca 764  Q
    ||||||||||||||||||||||||||| || ||||| || |||| |||||    
T  39620997 ggcttgcttatggaaacaacattggtcttactggcggaatccgcgataca 39620948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 1e-19; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 2160314 - 2160216
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaat 117  Q
    ||||| || |||||||| |||||||||||| | || ||||||||||| || ||||| |||||||||||||||||||| || ||||||||||||| ||||    
T  2160314 agaacagtgaggaacacagttgacacaggacgtactgttgtttgcacaatccatcagccaagtattgacatattcgacgcctttgatgaggtaacaaat 2160216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 19543295 - 19543382
Alignment:
Q  25 gttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaa 112  Q
    ||||| ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||||| || || |||  ||||||||||||||    
T  19543295 gttagaaacacagttgatacagggagaactgttgtgtgcacaattcatcaaccaagtattgatatttttgaaaattttgatgaggtaa 19543382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 25986702 - 25986620
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaag 113  Q
    |||||||| |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || ||  |||||||||||||| ||||    
T  25986702 aacacggtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatattttttaagcttttgatgagataag 25986620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 4501784 - 4501864
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggta 111  Q
    ||||| ||||| || |||||||||||||| ||||| ||||||||||| || ||||| || || ||||| ||||||||||||    
T  4501784 aacactgttgatactggaagaacagttgtgtgcacaattcatcaacctagcattgatatctttgaagcctttgatgaggta 4501864  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000009; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 49773652 - 49773743
Alignment:
Q  19 agaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| || ||||| || || |||||||| ||||| ||||| ||||| |||||||| || |||||||| ||||| || ||||||||||||||    
T  49773652 agaacagtgaggaatacagtggacacagggagaactgttgtctgcacaattcatcagcctagtattgatatatttgatgcttttgatgaggt 49773743  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 25522894 - 25522821
Alignment:
Q  37 gttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt 110  Q
    ||||| || |||||||| || ||||| ||||| ||||| ||||||||||| ||||| ||||| |||||||||||    
T  25522894 gttgatactggaagaactgtggtttgtaccatacatcagccaagtattgatatatttgaagcatttgatgaggt 25522821  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 12717084 - 12717006
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || ||  |||||||||||||||    
T  12717084 aacacagtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatattttttaagcttttgatgagg 12717006  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 10901796 - 10901718
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| || |||||||||||||| ||||| ||||| ||||| |||||||| ||||| || ||  |||||||||||||||    
T  10901796 aacacagtagacacaggaagaactgttgtgtgcacaattcaccaaccaagcattgatattttttaagcttttgatgagg 10901718  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 29777510 - 29777586
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga 107  Q
    ||||| ||||| || |||||||| ||||| || ||||| ||||||||||||||||| || || ||||| ||||||||    
T  29777510 aacactgttgatactggaagaactgttgtctgtaccatacatcaaccaagtattgatatttttgaagcatttgatga 29777586  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 8841 - 8919
Alignment:
Q  31 aacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgagg 109  Q
    ||||| || |||||||| ||||  ||||| ||||| ||||| |||||||||||||| || ||  |||||||||||||||    
T  8841 aacacagtagacacagggagaaatgttgtgtgcacaattcaccaaccaagtattgatattttttaagcttttgatgagg 8919  T

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