View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8985_low_21 (Length: 470)

Name: NF8985_low_21
Description: NF8985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8985_low_21
NF8985_low_21
[»] chr4 (62 HSPs)
chr4 (129-332)||(19901873-19902076)
chr4 (130-332)||(56558196-56558398)
chr4 (131-332)||(34778338-34778539)
chr4 (130-332)||(23610559-23610761)
chr4 (129-313)||(3952125-3952309)
chr4 (130-332)||(5763118-5763320)
chr4 (130-334)||(33247086-33247288)
chr4 (129-332)||(18206995-18207198)
chr4 (129-333)||(5416421-5416626)
chr4 (130-332)||(39862434-39862636)
chr4 (130-325)||(38079676-38079871)
chr4 (130-321)||(33262508-33262699)
chr4 (130-332)||(12153088-12153273)
chr4 (130-325)||(24073541-24073735)
chr4 (207-332)||(12241441-12241566)
chr4 (142-291)||(30567859-30568008)
chr4 (130-332)||(47922035-47922233)
chr4 (129-332)||(52018700-52018883)
chr4 (130-267)||(12312431-12312569)
chr4 (135-324)||(47922327-47922517)
chr4 (230-332)||(17080696-17080798)
chr4 (242-321)||(12312571-12312650)
chr4 (190-330)||(25442190-25442331)
chr4 (169-324)||(56269071-56269217)
chr4 (170-258)||(56453816-56453904)
chr4 (169-324)||(5524382-5524527)
chr4 (139-246)||(34927488-34927596)
chr4 (130-304)||(23474056-23474229)
chr4 (190-330)||(3326435-3326576)
chr4 (200-324)||(31862246-31862370)
chr4 (169-324)||(37002246-37002391)
chr4 (137-290)||(1871237-1871388)
chr4 (129-198)||(33524313-33524382)
chr4 (169-246)||(36688183-36688260)
chr4 (169-258)||(42010108-42010197)
chr4 (137-304)||(33841768-33841934)
chr4 (169-251)||(1015849-1015931)
chr4 (165-246)||(26428971-26429053)
chr4 (232-317)||(43447638-43447723)
chr4 (242-318)||(26428574-26428650)
chr4 (135-259)||(36532616-36532738)
chr4 (137-259)||(42844151-42844272)
chr4 (182-258)||(48084533-48084609)
chr4 (207-258)||(4404281-4404332)
chr4 (130-252)||(48914475-48914596)
chr4 (137-246)||(50483520-50483628)
chr4 (207-251)||(17080811-17080855)
chr4 (265-324)||(5361378-5361437)
chr4 (270-329)||(16567388-16567447)
chr4 (176-246)||(28701836-28701907)
chr4 (209-304)||(46804585-46804671)
chr4 (169-219)||(5361456-5361506)
chr4 (239-325)||(32366432-32366518)
chr4 (169-241)||(17493010-17493083)
chr4 (276-325)||(23119486-23119535)
chr4 (169-241)||(32146510-32146583)
chr4 (169-241)||(46238974-46239047)
chr4 (169-241)||(53526096-53526169)
chr4 (169-241)||(55160365-55160438)
chr4 (176-241)||(25219003-25219070)
chr4 (182-246)||(38865280-38865344)
chr4 (254-306)||(47750341-47750393)
[»] chr8 (41 HSPs)
chr8 (129-332)||(30426624-30426827)
chr8 (130-332)||(36991273-36991475)
chr8 (130-325)||(28069643-28069838)
chr8 (130-332)||(10652573-10652776)
chr8 (154-332)||(41511179-41511357)
chr8 (130-331)||(40695204-40695404)
chr8 (129-332)||(10672469-10672670)
chr8 (132-333)||(28318854-28319061)
chr8 (133-332)||(44859128-44859324)
chr8 (333-451)||(26066493-26066613)
chr8 (130-324)||(45113195-45113390)
chr8 (166-326)||(24101939-24102099)
chr8 (135-316)||(6014127-6014309)
chr8 (209-324)||(8412179-8412294)
chr8 (231-332)||(12177621-12177722)
chr8 (231-332)||(12422049-12422150)
chr8 (130-315)||(37966400-37966583)
chr8 (169-258)||(26749543-26749632)
chr8 (264-332)||(5033023-5033091)
chr8 (235-330)||(27490067-27490162)
chr8 (179-324)||(34612498-34612634)
chr8 (130-191)||(5033310-5033371)
chr8 (176-298)||(36748494-36748611)
chr8 (169-258)||(1937149-1937239)
chr8 (170-259)||(24557177-24557266)
chr8 (80-129)||(26066372-26066421)
chr8 (171-304)||(42761660-42761791)
chr8 (170-258)||(3763518-3763606)
chr8 (165-205)||(12177572-12177612)
chr8 (165-205)||(12422000-12422040)
chr8 (170-245)||(18689495-18689570)
chr8 (183-225)||(5033108-5033150)
chr8 (216-258)||(24241566-24241608)
chr8 (182-259)||(6399914-6399991)
chr8 (169-241)||(17867654-17867727)
chr8 (182-258)||(30796269-30796344)
chr8 (270-330)||(39143443-39143503)
chr8 (176-262)||(21360263-21360349)
chr8 (272-325)||(44888559-44888612)
chr8 (182-246)||(15901454-15901518)
chr8 (270-302)||(21492730-21492762)
[»] chr5 (40 HSPs)
chr5 (130-333)||(35660565-35660768)
chr5 (130-333)||(37266647-37266850)
chr5 (130-332)||(32129573-32129775)
chr5 (133-332)||(11775709-11775909)
chr5 (130-333)||(13032035-13032237)
chr5 (138-333)||(4895699-4895894)
chr5 (130-333)||(14349720-14349922)
chr5 (130-332)||(40753118-40753320)
chr5 (129-325)||(18625376-18625572)
chr5 (129-325)||(39902339-39902535)
chr5 (129-332)||(34827111-34827312)
chr5 (146-333)||(8440943-8441130)
chr5 (191-331)||(4592719-4592858)
chr5 (222-332)||(1475686-1475796)
chr5 (132-305)||(43309062-43309225)
chr5 (130-330)||(3057335-3057534)
chr5 (168-330)||(3057148-3057310)
chr5 (130-245)||(29340999-29341113)
chr5 (135-299)||(32793324-32793487)
chr5 (169-258)||(36290593-36290682)
chr5 (232-330)||(10173867-10173961)
chr5 (137-258)||(18653352-18653472)
chr5 (127-257)||(10361968-10362097)
chr5 (211-298)||(28142812-28142901)
chr5 (129-245)||(31653039-31653154)
chr5 (169-255)||(41660100-41660186)
chr5 (180-304)||(14688519-14688643)
chr5 (170-242)||(27428877-27428949)
chr5 (182-246)||(43222129-43222193)
chr5 (176-258)||(2984392-2984474)
chr5 (137-194)||(9460599-9460655)
chr5 (179-258)||(17247397-17247476)
chr5 (136-259)||(35650308-35650430)
chr5 (169-257)||(3041302-3041391)
chr5 (183-251)||(19179462-19179531)
chr5 (270-330)||(10242752-10242811)
chr5 (264-325)||(23253717-23253778)
chr5 (274-330)||(4348120-4348176)
chr5 (182-246)||(9465746-9465810)
chr5 (269-325)||(38283831-38283887)
[»] scaffold0012 (1 HSPs)
scaffold0012 (130-332)||(207980-208182)
[»] chr6 (34 HSPs)
chr6 (130-332)||(4804365-4804567)
chr6 (130-332)||(7162001-7162203)
chr6 (131-332)||(1249105-1249304)
chr6 (130-332)||(21159325-21159523)
chr6 (130-309)||(17944102-17944281)
chr6 (130-304)||(12412582-12412756)
chr6 (133-325)||(27826462-27826654)
chr6 (192-332)||(29698080-29698220)
chr6 (129-332)||(32737791-32737977)
chr6 (130-334)||(13089705-13089901)
chr6 (133-324)||(227522-227714)
chr6 (142-306)||(30460763-30460930)
chr6 (129-254)||(13888477-13888603)
chr6 (137-304)||(2800574-2800740)
chr6 (169-258)||(24484870-24484959)
chr6 (138-304)||(7215816-7215981)
chr6 (129-325)||(17828524-17828719)
chr6 (169-258)||(2142288-2142377)
chr6 (130-219)||(1516163-1516251)
chr6 (130-219)||(1518252-1518340)
chr6 (176-258)||(32254033-32254115)
chr6 (231-300)||(1518335-1518404)
chr6 (142-199)||(28696624-28696680)
chr6 (231-299)||(1516246-1516314)
chr6 (254-304)||(17398774-17398824)
chr6 (129-205)||(1515497-1515572)
chr6 (138-194)||(29229149-29229204)
chr6 (204-246)||(27096007-27096049)
chr6 (270-316)||(28696736-28696782)
chr6 (169-241)||(7098190-7098263)
chr6 (169-241)||(7545645-7545718)
chr6 (180-302)||(12734358-12734478)
chr6 (272-324)||(13888611-13888663)
chr6 (239-299)||(17275921-17275981)
[»] chr2 (41 HSPs)
chr2 (130-332)||(35316742-35316944)
chr2 (133-325)||(13238605-13238797)
chr2 (130-325)||(28564815-28565011)
chr2 (130-332)||(23259443-23259645)
chr2 (223-325)||(39465699-39465801)
chr2 (235-332)||(41983401-41983497)
chr2 (130-332)||(45625035-45625216)
chr2 (130-285)||(11864841-11864988)
chr2 (235-321)||(374499-374585)
chr2 (129-259)||(2063343-2063473)
chr2 (169-324)||(8988791-8988935)
chr2 (169-320)||(374932-375073)
chr2 (231-332)||(10877619-10877721)
chr2 (244-330)||(2061296-2061382)
chr2 (130-320)||(38397012-38397199)
chr2 (153-262)||(21454475-21454582)
chr2 (138-258)||(4446860-4446980)
chr2 (130-330)||(19908699-19908897)
chr2 (169-324)||(23459841-23459986)
chr2 (176-259)||(30709100-30709183)
chr2 (236-330)||(12949389-12949482)
chr2 (169-324)||(29188588-29188734)
chr2 (136-212)||(40640706-40640783)
chr2 (137-259)||(30857642-30857763)
chr2 (176-330)||(34512027-34512180)
chr2 (128-258)||(36758816-36758945)
chr2 (141-259)||(36929706-36929823)
chr2 (170-258)||(35315493-35315581)
chr2 (130-213)||(38824061-38824145)
chr2 (269-321)||(42075458-42075510)
chr2 (170-245)||(15709772-15709847)
chr2 (295-332)||(673185-673222)
chr2 (179-252)||(4603114-4603187)
chr2 (169-241)||(13780506-13780579)
chr2 (148-241)||(19905889-19905981)
chr2 (170-258)||(35315284-35315372)
chr2 (176-258)||(31618769-31618851)
chr2 (169-241)||(40254144-40254217)
chr2 (274-330)||(157353-157409)
chr2 (194-258)||(30840872-30840935)
chr2 (186-246)||(41072961-41073021)
[»] chr7 (43 HSPs)
chr7 (129-332)||(21151069-21151272)
chr7 (131-332)||(45260384-45260586)
chr7 (130-332)||(12139245-12139446)
chr7 (129-321)||(9559009-9559201)
chr7 (130-329)||(16366438-16366637)
chr7 (130-320)||(7362497-7362686)
chr7 (130-332)||(44647882-44648083)
chr7 (133-330)||(47226035-47226229)
chr7 (130-325)||(4888391-4888586)
chr7 (130-325)||(18198180-18198375)
chr7 (138-332)||(25084690-25084886)
chr7 (130-324)||(33450431-33450626)
chr7 (130-324)||(47500238-47500433)
chr7 (126-330)||(29630967-29631168)
chr7 (138-324)||(34985909-34986095)
chr7 (148-325)||(32915883-32916056)
chr7 (128-267)||(39855768-39855906)
chr7 (169-258)||(47799895-47799984)
chr7 (169-258)||(30588526-30588615)
chr7 (138-246)||(989132-989239)
chr7 (169-320)||(47080360-47080509)
chr7 (142-330)||(33608845-33609033)
chr7 (179-290)||(46802336-46802445)
chr7 (133-205)||(47271107-47271178)
chr7 (169-324)||(19889029-19889174)
chr7 (231-304)||(40019626-40019699)
chr7 (176-261)||(40023258-40023342)
chr7 (176-241)||(19027685-19027751)
chr7 (176-241)||(20726885-20726951)
chr7 (269-330)||(6882153-6882214)
chr7 (170-259)||(8149599-8149688)
chr7 (169-241)||(14696752-14696825)
chr7 (182-330)||(32916098-32916236)
chr7 (170-245)||(7712363-7712438)
chr7 (210-257)||(11828945-11828992)
chr7 (232-330)||(30153240-30153337)
chr7 (269-327)||(36726332-36726390)
chr7 (272-330)||(47271205-47271263)
chr7 (169-241)||(30102501-30102574)
chr7 (169-234)||(35737128-35737193)
chr7 (182-246)||(676030-676094)
chr7 (270-330)||(8607960-8608020)
chr7 (176-224)||(29844316-29844364)
[»] chr1 (50 HSPs)
chr1 (130-332)||(50484303-50484505)
chr1 (130-332)||(12151684-12151886)
chr1 (130-322)||(50294019-50294211)
chr1 (188-334)||(12380924-12381070)
chr1 (188-334)||(12384991-12385137)
chr1 (130-332)||(48327110-48327312)
chr1 (129-332)||(23861907-23862114)
chr1 (130-332)||(45977939-45978124)
chr1 (134-332)||(40328193-40328390)
chr1 (130-324)||(18976260-18976452)
chr1 (231-332)||(7841767-7841868)
chr1 (129-234)||(7840634-7840739)
chr1 (130-204)||(12380833-12380907)
chr1 (130-204)||(12384900-12384974)
chr1 (226-325)||(2845189-2845289)
chr1 (131-244)||(32361264-32361377)
chr1 (207-325)||(46608410-46608523)
chr1 (170-330)||(5047377-5047536)
chr1 (179-302)||(24977187-24977310)
chr1 (142-258)||(39426201-39426317)
chr1 (169-258)||(52280034-52280123)
chr1 (169-258)||(30077639-30077728)
chr1 (179-304)||(32887785-32887910)
chr1 (241-321)||(40988643-40988723)
chr1 (183-246)||(24413291-24413354)
chr1 (180-258)||(26372243-26372321)
chr1 (194-330)||(44483687-44483822)
chr1 (130-197)||(1228496-1228563)
chr1 (206-324)||(23916013-23916129)
chr1 (180-258)||(26860056-26860134)
chr1 (129-330)||(30210665-30210866)
chr1 (234-290)||(45970805-45970861)
chr1 (207-258)||(26768886-26768937)
chr1 (285-332)||(35977883-35977930)
chr1 (130-259)||(32618791-32618918)
chr1 (169-258)||(46045678-46045767)
chr1 (258-330)||(1609622-1609694)
chr1 (218-330)||(5803804-5803916)
chr1 (194-298)||(7844939-7845043)
chr1 (131-199)||(30860726-30860794)
chr1 (270-333)||(680106-680169)
chr1 (169-241)||(6948825-6948899)
chr1 (211-282)||(7783217-7783288)
chr1 (288-331)||(32361374-32361417)
chr1 (254-324)||(6816294-6816364)
chr1 (169-241)||(18107316-18107389)
chr1 (233-325)||(49384719-49384809)
chr1 (237-324)||(1228593-1228678)
chr1 (197-322)||(19910474-19910603)
chr1 (194-246)||(49943989-49944041)
[»] chr3 (39 HSPs)
chr3 (129-333)||(2229899-2230103)
chr3 (129-333)||(43719902-43720106)
chr3 (128-330)||(34373750-34373952)
chr3 (129-332)||(19830386-19830591)
chr3 (129-309)||(27033591-27033771)
chr3 (132-332)||(40851690-40851891)
chr3 (148-320)||(34373559-34373731)
chr3 (133-320)||(46167322-46167509)
chr3 (130-324)||(48084744-48084939)
chr3 (147-330)||(550790-550972)
chr3 (154-332)||(12402883-12403061)
chr3 (130-229)||(24754677-24754776)
chr3 (130-229)||(24763674-24763773)
chr3 (146-299)||(566746-566898)
chr3 (169-324)||(31523663-31523808)
chr3 (169-324)||(42613015-42613160)
chr3 (130-330)||(29586256-29586454)
chr3 (169-324)||(49679265-49679410)
chr3 (180-258)||(1995435-1995513)
chr3 (176-324)||(40810357-40810505)
chr3 (235-321)||(52859441-52859528)
chr3 (137-330)||(10474402-10474594)
chr3 (136-244)||(28229365-28229472)
chr3 (130-325)||(33632747-33632940)
chr3 (129-182)||(24647905-24647958)
chr3 (180-305)||(25285843-25285966)
chr3 (254-330)||(32577451-32577526)
chr3 (224-325)||(3009173-3009264)
chr3 (291-329)||(25506612-25506650)
chr3 (234-325)||(2310235-2310324)
chr3 (234-325)||(36354323-36354414)
chr3 (180-259)||(54911644-54911723)
chr3 (141-183)||(40809539-40809581)
chr3 (188-246)||(48950613-48950671)
chr3 (130-219)||(3009252-3009339)
chr3 (264-325)||(20485808-20485869)
chr3 (276-320)||(31996801-31996845)
chr3 (182-246)||(33979937-33980001)
chr3 (269-325)||(49289046-49289102)
[»] scaffold0250 (1 HSPs)
scaffold0250 (130-332)||(7064-7270)
[»] scaffold0035 (1 HSPs)
scaffold0035 (130-332)||(16353-16555)
[»] scaffold0008 (1 HSPs)
scaffold0008 (129-325)||(9156-9349)
[»] scaffold0009 (1 HSPs)
scaffold0009 (135-332)||(6396-6585)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-332)||(73817-73998)
[»] scaffold0126 (1 HSPs)
scaffold0126 (129-325)||(22398-22593)
[»] scaffold0456 (1 HSPs)
scaffold0456 (130-304)||(13641-13799)
[»] scaffold0171 (1 HSPs)
scaffold0171 (179-324)||(17311-17446)
[»] scaffold0468 (1 HSPs)
scaffold0468 (234-328)||(5531-5625)
[»] scaffold0121 (1 HSPs)
scaffold0121 (179-259)||(29574-29654)
[»] scaffold0062 (1 HSPs)
scaffold0062 (170-245)||(58684-58759)
[»] scaffold0664 (1 HSPs)
scaffold0664 (169-241)||(4695-4768)
[»] scaffold0252 (1 HSPs)
scaffold0252 (218-330)||(10518-10630)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 3e-92; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 19901873 - 19902076
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19901873 tgggtgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggt 19901972  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  19901973 cccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatagagaaacacataaatggagaggatctta 19902072  T
Q  329 accc 332  Q
    ||||    
T  19902073 accc 19902076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 56558398 - 56558196
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  56558398 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggtc 56558299  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  56558298 ccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatagagaaacatataaatggagaggatcctaa 56558199  T
Q  330 ccc 332  Q
    |||    
T  56558198 ccc 56558196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 131 - 332
Target Start/End: Complemental strand, 34778539 - 34778338
Alignment:
Q  131 ggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtct 230  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||     
T  34778539 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcc 34778440  T
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  34778439 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccacattgaagaaatggagaaacacataaatggagaggattctaac 34778340  T
Q  331 cc 332  Q
    ||    
T  34778339 cc 34778338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 23610761 - 23610559
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  23610761 gggtgaagatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtc 23610662  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  23610661 ccaccatcattaaatatattttacttttttcaagattttatgtatctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcttaa 23610562  T
Q  330 ccc 332  Q
    |||    
T  23610561 ccc 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 129 - 313
Target Start/End: Original strand, 3952125 - 3952309
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  3952125 tgggtgaagatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggt 3952224  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataa 313  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3952225 ctcaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataa 3952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 5763118 - 5763320
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||| |||||| |||||| || ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  5763118 gggtgaagatcctctcaatttggcaaaatatatggagttttacaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtc 5763217  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  5763218 ccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagatgatcctaa 5763317  T
Q  330 ccc 332  Q
    |||    
T  5763318 ccc 5763320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 33247086 - 33247288
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| ||| |||||     
T  33247086 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggtt 33247185  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33247186 ccaccatcattaattatattttatttttttc--gattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 33247283  T
Q  330 cccga 334  Q
    |||||    
T  33247284 cccga 33247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 18206995 - 18207198
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||  |||||||||  ||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  18206995 tgggtgaagatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggt 18207094  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | || |||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  18207095 cccatcatcattaattatattttacctttttcaagattttatgtgtctttatctttccaaattgaagaaattgagaaacacataaatggagaggatccta 18207194  T
Q  329 accc 332  Q
    ||||    
T  18207195 accc 18207198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 129 - 333
Target Start/End: Original strand, 5416421 - 5416626
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||  |||||||||||| |||||||||    
T  5416421 tgggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaa-tagattgtgggtcctaccactaagtgggt 5416519  T
Q  229 ctcaccatcattaattatattttacttttttc--aagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcc 326  Q
    | |||||||||||||||||||||||||||||   ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  5416520 cccaccatcattaattatattttacttttttttaaagattttatgtgtctttatctgtccaaattgaagaaatggagaaacacataaattgagaggattc 5416619  T
Q  327 taacccg 333  Q
    |||||||    
T  5416620 taacccg 5416626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 39862636 - 39862434
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||| || |||||| || ||| || ||     
T  39862636 gggtgaagatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagtt 39862537  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  39862536 ccaccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaaatgagaaacacataaatgaagaggatcctaa 39862437  T
Q  330 ccc 332  Q
    |||    
T  39862436 ccc 39862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 38079676 - 38079871
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||||||||   ||||||||| ||||||||| |||| ||||||||||||||||| ||||||||| |||||||||| | ||||||| |     
T  38079676 gggtgaagatcctctccatttaacaaaataaatggagttttgctagtttgagagagatagacacaagaaatagatggtgggtcctactactaagtggatt 38079775  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  38079776 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaaaaatggagaaacgcataaatggagaggatc 38079871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 33262508 - 33262699
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||| | ||||    
T  33262508 gggtgaagatcctctctatttggcaaaataaattgtgttttgcaagttagagagagatagacacaaaaaatagatggtggatcctaccactaaataggtc 33262607  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
     ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  33262608 ccaccatcattaattatattttactttttttaaaattttatgtgtctttatctctccaaattgaagaaatagaaaaatacataaatggagag 33262699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 12153273 - 12153088
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||                    
T  12153273 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaattagatggtgggtcc---------------- 12153190  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12153189 -caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 12153091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 24073735 - 24073541
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  24073735 gggtgaagatcctccccatttggcaaaataaatggagatttgtaagttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtc 24073636  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
     | |||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  24073635 ccgccatcattaattatatatt-tttttttcaagattttatgtgccttcatctctccaaatggaagaaattgagaaacacataaatggagaggatc 24073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 207 - 332
Target Start/End: Original strand, 12241441 - 12241566
Alignment:
Q  207 tgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaa 306  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaa 12241540  T
Q  307 cacataaatggagaggatcctaaccc 332  Q
    |||||||||| |||||||||||||||    
T  12241541 cacataaatgaagaggatcctaaccc 12241566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 142 - 291
Target Start/End: Complemental strand, 30568008 - 30567859
Alignment:
Q  142 tctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||  || ||||||||    
T  30568008 tctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcatta 30567909  T
Q  242 attatattttacttttttcaagatttaatgtgtctttatctctccaaatt 291  Q
    ||||||||||||||||||||| |||| |||||||||||||| || |||||    
T  30567908 attatattttacttttttcaaaattttatgtgtctttatctatcaaaatt 30567859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 47922035 - 47922233
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||| ||||| |  |||||| ||||||||| || |||||||||||    | ||||| |||||||||||||||  |||||| ||||| |||||||||     
T  47922035 gggtgaatatcctttttatttggcaaaataaatggaattttgcaagtt----aaagataaacacaaaaaatagatagtgggtcttaccactaagtgggtt 47922130  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||| ||||||||| ||||||||| |||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  47922131 ccaccatcattaaatatattttatttttttcaatattttacgtgtctttatctctctaaattgaagaaatggagaaacacataaattgagaggatcctaa 47922230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 332
Target Start/End: Complemental strand, 52018883 - 52018700
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||| ||                 ||||| |    
T  52018883 tgggtgaagatcctctccatttagcaaaataaatggagttttgcaagttggagagagatagatacaaaaaataaat-----------------agtggat 52018801  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | ||||||   |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52018800 cccaccat---taattatattttacttttttcaagattttatgtgtttttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 52018704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 12312431 - 12312569
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagac-acaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||| |||||||| |||||||||    
T  12312431 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggt 12312530  T
Q  229 ctcaccatcattaattatattttacttttttcaagattt 267  Q
    | || ||||||||||||||||||||||| || |||||||    
T  12312531 cccatcatcattaattatattttactttctttaagattt 12312569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 135 - 324
Target Start/End: Original strand, 47922327 - 47922517
Alignment:
Q  135 aagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcac 233  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| |||||||||| ||     
T  47922327 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcccat 47922426  T
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||  ||||||| ||||||||||||||| | ||  ||||| | |||| || ||||| | ||||||||| ||| | |||||||||||||||    
T  47922427 catctataattattttttacttttttcaaaactttgtgtgtttatatcactacaaatggtagaaatggataaagaaataaatggagaggat 47922517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 230 - 332
Target Start/End: Original strand, 17080696 - 17080798
Alignment:
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
    ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17080696 tcaccatcattcattatattttactttttccaagattttatctgtctttatctctccaaattgaagaaatggagaaacacataaatggaggggatcctaa 17080795  T
Q  330 ccc 332  Q
    |||    
T  17080796 ccc 17080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 12312571 - 12312650
Alignment:
Q  242 attatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12312571 attatattttacttttttcaaaattttatgtgtctttatctctctaaattgaagaaatggagaaacacataaatggagag 12312650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 330
Target Start/End: Original strand, 25442190 - 25442331
Alignment:
Q  190 acacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttta-cttttttcaagatttaatgtgtctttatctctccaa 288  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||  |||||||||| ||||| ||||||| |  |||   |||||||||||||||||||    
T  25442190 acacaaaaaatagattgtgggtcctaccactaagtggatctcaccgacattaattattttttaactttttttataattgtgtgtgtctttatctctccaa 25442289  T
Q  289 attgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    || ||||||||||||||   ||||||||||||||||| ||||    
T  25442290 atggaagaaatggagaaggccataaatggagaggatcttaac 25442331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 56269071 - 56269217
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta-tattttacttttttcaagattt 267  Q
    |||||| ||||||||||||||||||||||||||  || |||||||||||| |||||||||| ||||||||||||||| | |||||||||||             
T  56269071 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttttacttttt--------- 56269161  T
Q  268 aatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
     ||||||||||||||||| |||| ||| |||||||||||   |||||||||||||||    
T  56269162 -atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 56269217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 56453816 - 56453904
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||| ||||| |||||||||||    
T  56453816 tgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattattttttacttttt 56453904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 5524527 - 5524382
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||||||||||||||| ||||||||  || ||||||||| || |||||||||| |||||||||||||||| |||||||||||              
T  5524527 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattattttttacttttt---------- 5524438  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| |||| ||| ||||||| |||   |||||||||||||||    
T  5524437 atgtgtctttatctctctaaatggaacaaatggaaaaatttataaatggagaggat 5524382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 34927596 - 34927488
Alignment:
Q  139 tcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcaccatc 237  Q
    ||||||||||||  |||||||||| | ||||||||| ||  |||||||||||||||||| |||||||| ||||||||||||||||||  |||||| ||||    
T  34927596 tcctctccatttactaaaataaatggggttttgcaatttaaagagagatagacacaaaagaatagatggtgggtcctaccattaagtatgtctcatcatc 34927497  T
Q  238 attaattat 246  Q
    |||||||||    
T  34927496 attaattat 34927488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 23474229 - 23474056
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||||||||| | | ||||||| |||| | |||| |||| |||||||||||||| |||||||||| |||||||||| ||| ||||  ||    
T  23474229 gggtaaagatcctctccatttagcataataaatggagtat-gcaatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatc 23474131  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
     |||||||||||||||  ||||| |||||| ||  |||  ||||| | ||||||||||||| || |||| |||||    
T  23474130 ccaccatcattaattactttttaattttttgaattttttgtgtgtttatatctctccaaatggatgaaagggaga 23474056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 190 - 330
Target Start/End: Complemental strand, 3326576 - 3326435
Alignment:
Q  190 acacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtc-tttatctctccaa 288  Q
    |||||||||||| |  ||||||| ||||||||| |||||  |||||| ||||||||| ||||||||||||||| | ||  | |||| |||||||||| ||    
T  3326576 acacaaaaaataaaatatgggtcataccattaaatgggttccaccattattaattattttttacttttttcaaaactttttttgtcttttatctctcaaa 3326477  T
Q  289 attgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||| ||||||||||| |  |||||||||||||||||| ||||    
T  3326476 attaaagaaatggaggaggacataaatggagaggatcttaac 3326435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 324
Target Start/End: Original strand, 31862246 - 31862370
Alignment:
Q  200 tagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaat 299  Q
    |||||| ||| |||||||| |||||||||| |||||||||||||||| |||||||||||  || ||||  ||||||| ||||||||||||| | ||||||    
T  31862246 tagatggtggatcctaccactaagtgggtcccaccatcattaattattttttactttttctaaaattttgtgtgtctatatctctccaaatggtagaaat 31862345  T
Q  300 ggagaaacacataaatggagaggat 324  Q
     |||||  | |||||| ||||||||    
T  31862346 agagaaggatataaattgagaggat 31862370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 37002246 - 37002391
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||| ||||||||||||||||||||  || ||| |||||  | |||||||||| |||||||||||||||| |||||||||||              
T  37002246 ttgcaatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattattttttacttttt---------- 37002335  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| |||| ||| |||||||||||   |||||||||||||||    
T  37002336 atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 37002391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 1871388 - 1871237
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    ||||||||| |||||  ||||||||| |||| | |||| ||||||||||||||||| |||| ||||||  ||| |||||| | |||||||||| || |||    
T  1871388 gatcctctcaatttgacaaaataaatggagtat-gcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtcccatcat 1871290  T
Q  237 cattaattatattttacttttttcaagatttaatgtgtctttatctctccaaat 290  Q
    |||||||||| || || |||||||||  ||   |||||||||||||||||||||    
T  1871289 cattaattattttata-ttttttcaaatttctttgtgtctttatctctccaaat 1871237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 33524382 - 33524313
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaa 198  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||| |||||||    
T  33524382 tgggtgaagatcctctccatttggcaaaataaatggagatttggaagttggagagagatagatacaaaaa 33524313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 36688183 - 36688260
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||| ||||||||||||||||||||||||||  || || |||||| || |||||||||| ||||||||||||||||    
T  36688183 ttgcaatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattat 36688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 42010197 - 42010108
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||| ||||||||||  ||  |||||||| || ||| |||||| |||||||||||||||| |||||||||||    
T  42010197 ttgcaatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 42010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 33841768 - 33841934
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    ||||||||||||||| |||| ||||| |||| |  ||| |||||||||||||||||||||||||  ||  ||  |  |  |  ||| |||||| ||||||    
T  33841768 gatcctctccatttgttaaagtaaatggagtata-caatttggagagagatagacacaaaaaattaatagtgaatggtttcgataaatgggtcccaccat 33841866  T
Q  237 cattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
    ||||||||||  | |||| ||||||||||||  ||||||||||||| ||||||| || ||||||||||    
T  33841867 cattaattattgtatactcttttcaagattttttgtgtctttatctttccaaatggaggaaatggaga 33841934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 1015849 - 1015931
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttt 251  Q
    |||||| || |||||||||||||||||||||||  || ||||||| | ||||| ||||||| |||||||||||||||| ||||    
T  1015849 ttgcaatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 26429053 - 26428971
Alignment:
Q  165 agttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||||||| ||||||| |||||||||||||| |||||||| || ||||||||| | | ||||||||| |||||||||||||    
T  26429053 agttttgcaatttggagaaagatagacacaaaagaatagatggtgagtcctaccactgaatgggtctcatcatcattaattat 26428971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 43447638 - 43447723
Alignment:
Q  232 accatcattaattatattttacttttttcaaga-tttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgg 317  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||  ||| ||| |||||| ||||||||||    
T  43447638 accatcattaattatattttacttttttcaaaatttttatgtgtctttatctctcgaaataaaag-aatagagaaagacataaatgg 43447723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 26428650 - 26428574
Alignment:
Q  242 attatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgga 318  Q
    ||||| ||||||||||||||| | ||  ||||||| ||||||||||||||| ||||||||||||  |||||||||||    
T  26428650 attattttttacttttttcaaaaatttgtgtgtctatatctctccaaattgtagaaatggagaaggacataaatgga 26428574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 135 - 259
Target Start/End: Complemental strand, 36532738 - 36532616
Alignment:
Q  135 aagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacc 234  Q
    |||||||||||||| || |||||||||| |||||   ||| || |||||||||||||||| |||||| ||  ||| ||||| |||| |||||||  ||||    
T  36532738 aagatcctctccatctgataaaataaatggagttca-caatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttccacc 36532640  T
Q  235 atcattaattatattttactttttt 259  Q
    || ||||||||| ||||||||||||    
T  36532639 at-attaattattttttactttttt 36532616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 42844151 - 42844272
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    |||||||||||| |  |||||||||| |||||   ||| ||||||| ||||||||||| ||||||||   || ||||||| ||||| ||| || | ||||    
T  42844151 gatcctctccatattataaaataaatagagttaa-caatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctccat 42844249  T
Q  237 cattaattatattttactttttt 259  Q
    |||||||||| ||||||||||||    
T  42844250 cattaattattttttactttttt 42844272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 48084533 - 48084609
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||| |||| |||  || ||||| ||| || |||||||||| |||||||||||||||| |||||||||||    
T  48084533 agagatagacataaaacataagtggtgggttctagcactaagtgggtcccaccatcattaattattttttacttttt 48084609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 4404332 - 4404281
Alignment:
Q  207 tgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  4404332 tgggtcctatcattaagtgtgtctcaccatcattaattaatttttacttttt 4404281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 48914475 - 48914596
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||| ||||||||| | ||||||||| |||  | |||| || ||||||||| |||||| |||||||||  ||||||||| ||| ||||||||     
T  48914475 gggtaaagatcttctccatttagcaaaataaatggagaat-gcaatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggtt 48914573  T
Q  230 tcaccatcattaattatatttta 252  Q
     | | |||||||||||| |||||    
T  48914574 ccgctatcattaattatttttta 48914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 50483520 - 50483628
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    |||| ||||||||| | |||||||||||||| | |||| ||||||| ||||||||||  |||||||||  | | ||| ||||||||||| ||| ||  ||    
T  50483520 gatcatctccatttagcaaaataaattgagtat-gcaatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattat 50483618  T
Q  237 cattaattat 246  Q
    ||||||||||    
T  50483619 cattaattat 50483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 17080855 - 17080811
Alignment:
Q  207 tgggtcctaccattaagtgggtctcaccatcattaattatatttt 251  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||    
T  17080855 tgggtcctaccattgagtgagtctcaccatcattaattatttttt 17080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 5361437 - 5361378
Alignment:
Q  265 tttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||||||| |||| ||| ||||| |||||   |||||||||||||||    
T  5361437 tttaatgtgtctttatctctctaaatggaacaaatgaagaaatttataaatggagaggat 5361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 16567388 - 16567447
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
    ||||||||||||| | |||||||||||||| |||| | ||||||||| ||||||| ||||    
T  16567388 tgtgtctttatcttttcaaattgaagaaattgagagaaacataaatgtagaggattctaa 16567447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 28701836 - 28701907
Alignment:
Q  176 ttggagagagatagacacaaaaaa-tagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||||||||||||| |||||| ||  || ||||||  | || |||||||||||||||||||||||||||    
T  28701836 ttggagagagatagacaaaaaaaaataagtggtgggtcaaatcactaagtgggtctcaccatcattaattat 28701907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 46804671 - 46804585
Alignment:
Q  209 ggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
    |||||||||||||||||||||  || |||||||||||  ||||||||||||          ||||||||||||||||||||| | |||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaattactttttactttttt---------gtgtgtctttatctctccaaatggtagaaatggaga 46804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 5361506 - 5361456
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccat 219  Q
    |||||| ||||||||||||||||||||||||||  || ||||||| |||||    
T  5361506 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccaccat 5361456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 32366432 - 32366518
Alignment:
Q  239 ttaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||| |||||||||||| || |||  | | |||||| |||||| |||| ||||||||||||||  ||| ||||| ||||||||    
T  32366432 ttaattattttttactttttttaaaattctacgcgtctttgtctctctaaatagaagaaatggagaacaacacaaatgaagaggatc 32366518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 17493083 - 17493010
Alignment:
Q  169 ttgcaagttggagagagatagacacaa-aaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||||||| ||||||  || ||||||||| || ||||||| |  |||||||||||    
T  17493083 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggattccaccatcatta 17493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 23119486 - 23119535
Alignment:
Q  276 tttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||||| ||||    
T  23119486 tttatctctccaaatggaagaaatggagagactaataaatggagatgatc 23119535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 32146583 - 32146510
Alignment:
Q  169 ttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| ||||||||||||||| || ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  32146583 ttgcaatttggagagagatagatacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 32146510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 46239047 - 46238974
Alignment:
Q  169 ttgcaagttggagagagatagacacaa-aaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| ||| |||||||||||||||| ||||||  || ||||||||| || ||||||| || |||||||||||    
T  46239047 ttgcaatttgaagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 46238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 53526169 - 53526096
Alignment:
Q  169 ttgcaagttggagagagatagac-acaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||| | ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  53526169 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 53526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 55160365 - 55160438
Alignment:
Q  169 ttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| ||||| |||||||||||| ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  55160365 ttgcaatttggaaagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 55160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 25219070 - 25219003
Alignment:
Q  176 ttggagagagatagacacaa--aaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    ||||||||||||||||||||  ||||||  || ||||||||| || ||||||| || |||||||||||    
T  25219070 ttggagagagatagacacaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 25219003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 38865344 - 38865280
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||||||||||||||||  || | |||||||||||||| | |||  || |||||||||||||    
T  38865344 agagatagacacaaaaaatatgtggtaggtcctaccattaaataggttccagcatcattaattat 38865280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 47750393 - 47750341
Alignment:
Q  254 ttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaa 306  Q
    |||||||||  |||| ||||| |||||||||| |||| |||||||||||||||    
T  47750393 ttttttcaaactttattgtgtttttatctctctaaatagaagaaatggagaaa 47750341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 7e-90; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 30426624 - 30426827
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  30426624 tgggtgaagaccctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggt 30426723  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30426724 cccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacacataaatggagaggatccta 30426823  T
Q  329 accc 332  Q
    ||||    
T  30426824 accc 30426827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 36991475 - 36991273
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  36991475 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtc 36991376  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36991375 ccaccatcattaattatatttgacttttttcaagattttacgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaa 36991276  T
Q  330 ccc 332  Q
    |||    
T  36991275 ccc 36991273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 28069838 - 28069643
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  28069838 gggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtc 28069739  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
     |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  28069738 ccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatggaagaaattgaaaaacacataaatggagaggatc 28069643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 10652573 - 10652776
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||| |||||| ||| | ||| ||||||    
T  10652573 gggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattgggtc 10652672  T
Q  230 tcaccatcattaattata-ttttac-ttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcct 327  Q
     ||||||||||||||||| |||||| ||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  10652673 ccaccatcattaattatatttttactttttttcaaaattttatgtgt-tttatctctccaaattgaagaaatgaagaaacacataaatggagaggatctt 10652771  T
Q  328 aaccc 332  Q
    |||||    
T  10652772 aaccc 10652776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 154 - 332
Target Start/End: Complemental strand, 41511357 - 41511179
Alignment:
Q  154 aaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttac 253  Q
    ||||||||| ||||||||||||||||| ||||||||| | |||||||||||  ||||||||| || ||||||| |  |||||||||||||||||||||||    
T  41511357 aaaataaatggagttttgcaagttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattatattttac 41511258  T
Q  254 ttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41511257 ttttttcaagattttatgtgtttttatctctccaaattgaagaaatggaaaaacacataaatggagaggatcctaaccc 41511179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 130 - 331
Target Start/End: Original strand, 40695204 - 40695404
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||| ||||||||| | ||||||||| |||||| | ||||||||||||||||||||||||||||||||| | |||||||||| |||||| ||     
T  40695204 gggtgaagatcttctccatttagcaaaataaatggagtttgg-aagttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagtt 40695302  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| ||| |||||||| | |||||||||||    
T  40695303 ccaccatcattagttatattttacttttttcaagattttatgtttctttatccctccaaattgaagaaatggataaatacataaatagggaggatcctaa 40695402  T
Q  330 cc 331  Q
    ||    
T  40695403 cc 40695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 10672469 - 10672670
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||||| ||    
T  10672469 tgggtgaagattctctccatttggcaaaataaatggagttttgcaagttggaga--gatagacacaaaaaatagatggtggatcctaccactaagtgagt 10672566  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | |||||||||||||||||||||||  |||| || |||| |||| | ||||||||||||||||||| ||||| ||||||||||||||| ||||||| |||    
T  10672567 cccaccatcattaattatattttaccctttttaaaattttatgtatttttatctctccaaattgaataaatgaagaaacacataaatgaagaggatacta 10672666  T
Q  329 accc 332  Q
    ||||    
T  10672667 accc 10672670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 28318854 - 28319061
Alignment:
Q  132 gtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaata------gatgatgggtcctaccattaagtg 225  Q
    ||||||||| |||  |||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||      |||  |||||||||||| ||||||    
T  28318854 gtgaagatcttctttatttggtaaaataaatggagttttgcaagtttgagagagatatacaaaaaaaataaaaaaagatagtgggtcctaccactaagtg 28318953  T
Q  226 ggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    ||||  |||||||||||||||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||  |||    
T  28318954 ggtccaaccatcattaattatattttactttttttaaaattttatgtgtctttgtctctccaaattgaagaaatggagaaacacgtaaatggagaaaatc 28319053  T
Q  326 ctaacccg 333  Q
    ||||||||    
T  28319054 ctaacccg 28319061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 133 - 332
Target Start/End: Original strand, 44859128 - 44859324
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctca 232  Q
    ||||||||||||| |||||  ||||||||| |||||||||||||| |||||||||||||   ||||||||||| ||||| |||||| |||||||||| ||    
T  44859128 tgaagatcctctctatttgacaaaataaatggagttttgcaagttagagagagatagact--aaaaatagatggtgggttctaccactaagtgggtccca 44859225  T
Q  233 ccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    |||||||||||||||||||| |||||  || |||| | ||||||||||||||||||||| |||||| ||| |||||| |||||||||| |||||||||||    
T  44859226 ccatcattaattatattttattttttaaaaaatttcacgtgtctttatctctccaaattaaagaaaaggaaaaacacgtaaatggaga-gatcctaaccc 44859324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 26066493 - 26066613
Alignment:
Q  333 gagccactctttgatcgtgtctcttccacatg--acattcatctccctaaatcaccaccacgaagtgtcatatacatgcacatgttgcaatgatattagt 430  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |    
T  26066493 gagccactctttgatcgtgtctcttccacatgtgacattcatctccctaaatcaccaccacgaagtgtcatatacatgcaaatgttgcaatgattttaat 26066592  T
Q  431 tattcaaaattcttcatgcat 451  Q
    |||||||||||||||||||||    
T  26066593 tattcaaaattcttcatgcat 26066613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 130 - 324
Target Start/End: Complemental strand, 45113390 - 45113195
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggt 228  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||| |||||||| ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | || ||||||||||||| ||||| ||||||||| |||| |||||||| ||||||||||||| | | ||||| ||||  | |||||||||||||||    
T  45113290 cccatcatcattaattattttttatttttttcaaaattttatgtgtctatatctctccaaatggtaaaaatgaagaaggatataaatggagaggat 45113195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 166 - 326
Target Start/End: Complemental strand, 24102099 - 24101939
Alignment:
Q  166 gttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagat 265  Q
    ||||||||||||  ||||||||||||| |||||||||||| ||| |||||||| |||||| ||  |||||||||||||||||||| | ||||||||||||    
T  24102099 gttttgcaagtttaagagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattatatttcatttttttcaagat 24102000  T
Q  266 ttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcc 326  Q
    || | ||||||||||||||||||||| || |||| || |||||||||||||||||||||||    
T  24101999 tttacgtgtctttatctctccaaattaaaaaaatagaaaaacacataaatggagaggatcc 24101939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 135 - 316
Target Start/End: Complemental strand, 6014309 - 6014127
Alignment:
Q  135 aagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcac 233  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||  |     
T  6014309 aagatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctat 6014210  T
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatg 316  Q
     |||||||||||| |||||||||||| || | ||  ||||||| || |||||||||| | ||||||  ||||  |||||||||    
T  6014209 tatcattaattatgttttacttttttgaaaactttgtgtgtctatacctctccaaatggtagaaataaagaaggacataaatg 6014127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 8412294 - 8412179
Alignment:
Q  209 ggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaaca 308  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||| |||| ||| ||||| ||||| |    
T  8412294 ggtcctaccactaagtagatctcaccatcgttaattatattttacttttttcaatattttatgtgtatttatctctctaaatggaaaaaatgaagaaaaa 8412195  T
Q  309 cataaatggagaggat 324  Q
    ||||||||||||||||    
T  8412194 cataaatggagaggat 8412179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 12177621 - 12177722
Alignment:
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||| |||||||||| |||||||||||||| |  |||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  12177621 caccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacacataaatagagaggatcctaac 12177720  T
Q  331 cc 332  Q
    ||    
T  12177721 cc 12177722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 12422049 - 12422150
Alignment:
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||| |||||||||| |||||||||||||| |  |||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  12422049 caccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacacataaatagagaggatcctaac 12422148  T
Q  331 cc 332  Q
    ||    
T  12422149 cc 12422150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 130 - 315
Target Start/End: Original strand, 37966400 - 37966583
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||||||||||| ||||||||| || ||| |||| ||| ||||||||| |||||||||||||||  | |||||||||| ||| ||   |    
T  37966400 gggttaagatcctctccatttggcaaaataaatggaattt-gcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaattgaacc 37966498  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaat 315  Q
     ||  | ||||||||||||||||||||||| ||  ||| |||| |||||||||||||||||  |||||||||||||| ||||||||    
T  37966499 -caataccattaattatattttactttttttaaatttttatgtatctttatctctccaaataaaagaaatggagaaagacataaat 37966583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 26749543 - 26749632
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  26749543 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 26749632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 5033091 - 5033023
Alignment:
Q  264 atttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  5033091 attttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcttaaccc 5033023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 27490067 - 27490162
Alignment:
Q  235 atcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||||||||||||||||||||| |||| | ||| ||||| ||||| |||||||| |||||| ||||||||||||| |||| ||||    
T  27490067 atcattaattatattttacttttttcaagattttatgtatttttgtctcttcaaatggaagaaattgagaaagacataaatggagaagatcttaac 27490162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 324
Target Start/End: Complemental strand, 34612634 - 34612498
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta-tattttacttttttcaagatttaatgtgtctt 277  Q
    |||||||||||||||||||||||  || ||||||||| || |||||||||||||||||||||||||| | |||||||||||          |||||||||    
T  34612634 gagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttttacttttt----------atgtgtctt 34612545  T
Q  278 tatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    |||||||| |||| ||| ||||||| |||   |||||||||||||||    
T  34612544 tatctctctaaatggaacaaatggaaaaatttataaatggagaggat 34612498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 5033371 - 5033310
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagac 191  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5033371 gggtgaagatcctttccatttggcaaaataaatggagttttgcaagttggagagagatagac 5033310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 36748494 - 36748611
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtc 275  Q
    ||||||| ||||||||||||||| ||||    ||||||||||||||||||| || |||||||||||||  |||||||  ||||||||| ||   ||||||    
T  36748494 ttggagatagatagacacaaaaa-tagacagcgggtcctaccattaagtggatcccaccatcattaat--tatttta--tttttcaagcttctctgtgtc 36748588  T
Q  276 tttatctctccaaattgaagaaa 298  Q
    ||||||||||||||| |||||||    
T  36748589 tttatctctccaaatggaagaaa 36748611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 1937149 - 1937239
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaataga-tgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||   | || ||||||||| || |||| ||||| |||||||||||||||| |||||||||||    
T  1937149 ttgcaatttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttacttttt 1937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 24557177 - 24557266
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt 259  Q
    ||||| ||||| ||||||| | ||| ||||||| | |||||||||||||||||||| ||| || ||||||||||||  ||||||||||||    
T  24557177 tgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaattactttttactttttt 24557266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 26066372 - 26066421
Alignment:
Q  80 taaaatttgattactttaagacattctaaaaaacgaagccttttacttct 129  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  26066372 taaaatttgattactttaagtcattctaaaaaacgaagcattttacttct 26066421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 42761791 - 42761660
Alignment:
Q  171 gcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaat 270  Q
    |||| ||| ||||||||||||||| |||||||||  ||| |||||||| | |||||||  || ||||||||||||| ||||| ||||| |||  |||  |    
T  42761791 gcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttccatcatcattaattattttttaatttttccaa-ttttttt 42761693  T
Q  271 gtgtctttatctctccaaattgaagaaatggaga 304  Q
    | |||| ||||||||| |||||||||||||||||    
T  42761692 gagtctatatctctcc-aattgaagaaatggaga 42761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 3763518 - 3763606
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||| |||||||| | |||||| |||||| || || ||||||||||||||||||||||  |||| |||||||||   |||||||||||    
T  3763518 tgcaatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaattgctttttacttttt 3763606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 12177572 - 12177612
Alignment:
Q  165 agttttgcaagttggagagagatagacacaaaaaatagatg 205  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12177572 agttttgcaagttggagagagatagatacaaaaaatagatg 12177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 12422000 - 12422040
Alignment:
Q  165 agttttgcaagttggagagagatagacacaaaaaatagatg 205  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12422000 agttttgcaagttggagagagatagatacaaaaaatagatg 12422040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 18689570 - 18689495
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta 245  Q
    ||||| ||||||||||||| ||| | |||||||||  ||| ||||||||||||||||||  || ||||||||||||    
T  18689570 tgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 5033150 - 5033108
Alignment:
Q  183 gagatagacacaaaaaatagatgatgggtcctaccattaagtg 225  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  5033150 gagatagacacaaaaaatagatggtgggtcctaccactaagtg 5033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 24241608 - 24241566
Alignment:
Q  216 ccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  24241608 ccattaagtgggtttcaccatcattaattattttttacttttt 24241566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 6399991 - 6399914
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt 259  Q
    |||||||||||||||||||||||| |||||| ||  |  |||||| || ||  |||||||||||| ||||||||||||    
T  6399991 agagatagacacaaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattattttttactttttt 6399914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 17867654 - 17867727
Alignment:
Q  169 ttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||||| ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  17867654 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 17867727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 30796344 - 30796269
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||||||| | ||||||| |||  ||||| || || |||||||||| |||||||||||||||| |||||||||||    
T  30796344 agagatagacgctaaaaataaatggcgggtc-tatcactaagtgggtcccaccatcattaattattttttacttttt 30796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 39143503 - 39143443
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||| |||| ||||||||||  |||||||||||||| |||| |||| |||||||||||||    
T  39143503 tgtgtttttacctctccaaataaaagaaatggagaaaaacattaatgaagaggatcctaac 39143443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 21360349 - 21360263
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaa 262  Q
    ||||||||||||| ||||| || |||||| || | || |||||||||||||  | |||||| ||||||||  ||||| |||||||||    
T  21360349 ttggagagagataaacacataatatagataatagatcataccattaagtggaccccaccattattaattactttttatttttttcaa 21360263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 44888612 - 44888559
Alignment:
Q  272 tgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    ||||||||||||||||||| ||| ||||||||| |   ||||||||||||||||    
T  44888612 tgtctttatctctccaaatagaaaaaatggagacaattataaatggagaggatc 44888559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 15901518 - 15901454
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||||| ||||||||||| |  |||||||||  ||||| ||||||| || ||||||||||||    
T  15901518 agagatagatacaaaaaataggtcgtgggtcctattattaaatgggtcttactatcattaattat 15901454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 21492762 - 21492730
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatgga 302  Q
    ||||||||||||||||||||| |||||||||||    
T  21492762 tgtgtctttatctctccaaatggaagaaatgga 21492730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 7e-90; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 130 - 333
Target Start/End: Original strand, 35660565 - 35660768
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35660565 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 35660664  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  35660665 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaacggagaaacacataaatagagaggatcttaa 35660764  T
Q  330 cccg 333  Q
    ||||    
T  35660765 cccg 35660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 130 - 333
Target Start/End: Complemental strand, 37266850 - 37266647
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  37266850 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtc 37266751  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  37266750 ccaccatcattaattatattttagttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacacgtaaatggagaggatcctaa 37266651  T
Q  330 cccg 333  Q
    ||||    
T  37266650 cccg 37266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 32129573 - 32129775
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  32129573 gggtgaagatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtc 32129672  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32129673 ccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcctaa 32129772  T
Q  330 ccc 332  Q
    |||    
T  32129773 ccc 32129775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 133 - 332
Target Start/End: Complemental strand, 11775909 - 11775709
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctca 232  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| ||    
T  11775909 tgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtccca 11775810  T
Q  233 ccatcattaattatattttactt-ttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacc 331  Q
    || |||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11775809 ccgtcattaattatattttactttttttcaagattttatgtgtttttatctctccaaattgaagaaatggagaaacacataaatggagaggatcttaacc 11775710  T
Q  332 c 332  Q
    |    
T  11775709 c 11775709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 130 - 333
Target Start/End: Complemental strand, 13032237 - 13032035
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||| ||||||    
T  13032237 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtc 13032138  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13032137 ccaccatcattaattatatttta-tttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 13032039  T
Q  330 cccg 333  Q
    ||||    
T  13032038 cccg 13032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 138 - 333
Target Start/End: Original strand, 4895699 - 4895894
Alignment:
Q  138 atcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatc 237  Q
    |||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  238 attaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacccg 333  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  4895799 attaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatgaagaggatcctaacccg 4895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 130 - 333
Target Start/End: Complemental strand, 14349922 - 14349720
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  14349922 gggtgaagatcctctctatttggtaaaataaatggagttttgtaagttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtc 14349823  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| |||    
T  14349822 ccaccatcattaattatattttacttttttcaagattt-atgtgtctttatctttccaaattaaagaaatggagaaacacataaatggagaagatcttaa 14349724  T
Q  330 cccg 333  Q
    ||||    
T  14349723 cccg 14349720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 40753118 - 40753320
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||| |||||| |||||||||  |||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||    
T  40753118 gggtgaagatcctctctatttggcaaaataaataaagttttgcaagttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtc 40753217  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  40753218 ccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatggagaagcacataaatggagaggatcctaa 40753317  T
Q  330 ccc 332  Q
    |||    
T  40753318 ccc 40753320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 18625376 - 18625572
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||    
T  18625376 tgggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggt 18625475  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    | |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||    
T  18625476 cccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatgaaagaaattgaaaaacacataaatggagaggatc 18625572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 129 - 325
Target Start/End: Complemental strand, 39902535 - 39902339
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||||||| |||||||||||||  ||||||||| ||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||| ||| ||| |    
T  39902535 tgggtgaagttcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggat 39902436  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
      ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39902435 tccaccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 39902339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 129 - 332
Target Start/End: Complemental strand, 34827312 - 34827111
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||| ||||||||| | ||||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||| |||||||| |||||||||    
T  34827312 tgggtgaagatcatctccatttagcaaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggt 34827213  T
Q  229 ctcaccatcattaattatattttactt-ttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcct 327  Q
    | ||||||| ||||||||||||||||| ||||||| ||||  ||||||||||||||| |||||| |||||||||| ||||| |||||||| |||||||||    
T  34827212 cccaccatctttaattatattttactttttttcaaaattt--tgtgtctttatctcttcaaatttaagaaatgga-aaacatataaatggtgaggatcct 34827116  T
Q  328 aaccc 332  Q
    |||||    
T  34827115 aaccc 34827111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 146 - 333
Target Start/End: Original strand, 8440943 - 8441130
Alignment:
Q  146 catttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta 245  Q
    ||||||| ||||||||| ||||||||||||||||||  |||||||||| ||||||||||| || | | ||||| |||||| ||| |||||||||||||||    
T  8440943 catttggcaaaataaatggagttttgcaagttggaggtagatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaatta 8441042  T
Q  246 tattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacccg 333  Q
    |||||||||||||| ||||||  |||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  8441043 tattttactttttttaagattgtatgtgtatttatctctccaaattgatgaaacggagaaacacataaatggagatgatcctaacccg 8441130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 4592858 - 4592719
Alignment:
Q  191 cacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaat 290  Q
    ||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatattttacttttttcaatattttatgtgt-attatctctccaaat 4592760  T
Q  291 tgaagaaatggagaaacacataaatggagaggatcctaacc 331  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  4592759 tgaagaaatggagaaacacataaatggagaggattctaacc 4592719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 332
Target Start/End: Original strand, 1475686 - 1475796
Alignment:
Q  222 agtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||| ||||    
T  1475686 agtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatcactccaaattgaagaaatgaaaaaacacataaatgaagag 1475785  T
Q  322 gatcctaaccc 332  Q
    |||||||||||    
T  1475786 gatcctaaccc 1475796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 132 - 305
Target Start/End: Complemental strand, 43309225 - 43309062
Alignment:
Q  132 gtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctc 231  Q
    |||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||| || ||||||||| |||||  |    
T  43309225 gtgaagatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttcc 43309126  T
Q  232 accatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaa 305  Q
    ||||||||||||          |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  43309125 accatcattaat----------ttttttcaagattttatgtgtctttatctcttcaaattgaagaaatggagaa 43309062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 130 - 330
Target Start/End: Complemental strand, 3057534 - 3057335
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||| |||||| ||||||||| ||||||||  ||||| ||     
T  3057534 gggttaagatcctctccattttgtaaaataaatagagtttt-caattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagtt 3057436  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     || ||||||||||||| || ||||||||||||  |||  |||||||||||||||| |||| |||||||  |||| | ||||||||||||| |||| |||    
T  3057435 ccatcatcattaattattttatacttttttcaaacttttttgtgtctttatctctcaaaatggaagaaagtgagagaaacataaatggagatgatcttaa 3057336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 168 - 330
Target Start/End: Original strand, 3057148 - 3057310
Alignment:
Q  168 tttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattt 267  Q
    ||||||| ||||| ||||||| |||||||||||||||| ||| ||||||||||||||| ||| ||  ||||||||||||||||||||||||| || | ||    
T  3057148 tttgcaatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatattttacttttttaaaaaatt 3057247  T
Q  268 aatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
     | |||||||||||||| ||||| ||||||||||||| | |||||| |||||| |||| ||||    
T  3057248 taagtgtctttatctcttcaaatagaagaaatggagagagacataattggagaagatcttaac 3057310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 29341113 - 29340999
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||||||||||||| ||||||| |||| | |||| ||||||||||||||||||| |||||||||  |||||||||| ||||||||||||    
T  29341113 gggtaaagatcctctccatttggtataataaatggagtat-gcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtc 29341015  T
Q  230 tcaccatcattaatta 245  Q
     |||||||||||||||    
T  29341014 ccaccatcattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 135 - 299
Target Start/End: Complemental strand, 32793487 - 32793324
Alignment:
Q  135 aagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacc 234  Q
    |||||||| || |||| | ||||||||| ||||||  ||| || |||||||||| |||||||||||||||||||  || ||| | ||||| |||| |||     
T  32793487 aagatcctatctatttagcaaaataaatggagttta-caatttagagagagatatacacaaaaaatagatgatgattcttactactaagtaggtcccaca 32793389  T
Q  235 atcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaat 299  Q
    ||||| ||||||||||||||||||||||||||| ||  |||||||||||| |||||  |||||||    
T  32793388 atcatcaattatattttacttttttcaagattttattcgtctttatctcttcaaatgaaagaaat 32793324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 36290682 - 36290593
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||||  || ||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  36290682 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttacttttt 36290593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 10173961 - 10173867
Alignment:
Q  232 accatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||| ||||||||||||||| |||    ||||||||||||||||||||  | |||||||||||  |||||||||||||||||| ||||    
T  10173961 accatcattaattattttttacttttttcaaaatt----gtgtctttatctctccaaatgaaggaaatggagaaggacataaatggagaggatcttaac 10173867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 18653472 - 18653352
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    ||||||||| | |||  ||||||||| |||||| |||| ||| |||||||||||||||||||||||||  || || ||||||||||||| ||||||||||    
T  18653472 gatcctctcaaattgtcaaaataaatggagttt-gcaatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtgagtctcaccat 18653374  T
Q  237 cattaattatattttacttttt 258  Q
     | ||||||| || ||||||||    
T  18653373 taataattattttatacttttt 18653352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 10361968 - 10362097
Alignment:
Q  127 tctgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgg 226  Q
    ||||||||||||||||||||||||   ||| ||||| ||   | |||| | ||||||||||||| ||| ||||| | |  ||| ||||||||||||||||    
T  10361968 tctgggtgaagatcctctccatttataaaactaaatggaagat-gcaattaggagagagatagagacataaaattggtagtggatcctaccattaagtgg 10362066  T
Q  227 gtctcaccatcattaattatattttactttt 257  Q
    |||||||| ||||||||||| ||||||||||    
T  10362067 gtctcaccgtcattaattattttttactttt 10362097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 298
Target Start/End: Original strand, 28142812 - 28142901
Alignment:
Q  211 tcctaccattaagtgggtctcaccatcattaattatattttac-ttttttcaaga-tttaatgtgtctttatctctccaaattgaagaaa 298  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||||  || ||||||| |||||||    
T  28142812 tcctaccattaagtgagtcccaccatcattaattatattttactttttttcaagatttttatgtgtctttgcctttccaaatggaagaaa 28142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 31653154 - 31653039
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||| |||||||| ||||||||||| ||||||| | || | |||| ||||||||||||| ||||| |||||||||   | ||||||| |||||||| ||    
T  31653154 tgggtaaagatcctatccatttggtataataaatggcgtat-gcaatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagt 31653056  T
Q  229 ctcaccatcattaatta 245  Q
    ||||| |||||||||||    
T  31653055 ctcacaatcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 41660186 - 41660100
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactt 255  Q
    |||||| ||||||||||||||||||||||||||  || ||||||  | || || ||||||| |||||||||||||||| ||||||||    
T  41660186 ttgcaatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattattttttactt 41660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 14688643 - 14688519
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtcttta 279  Q
    |||||||| |||||| |||||||||  ||| | |||||||||||||| |  |||||||||||  ||| ||| |||||||| ||  |||  | ||||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcattagatatttttgactttttttaaatttttgtatgtcttta 14688544  T
Q  280 tctctccaaattgaagaaatggaga 304  Q
    ||||||||||| |||||||| ||||    
T  14688543 tctctccaaatggaagaaatagaga 14688519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 27428877 - 27428949
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaa 242  Q
    ||||| ||||| |||||||||||||||||||||||| ||  ||||||||||||||| ||  ||||||||||||    
T  27428877 tgcaatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 43222193 - 43222129
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||||||||||||||||||||| |||||| || |||||| ||| || ||||||||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattat 43222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 2984392 - 2984474
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||||||||||| ||||||  |||||  ||||| || ||| |||||| |||||||||||||||| ||||| |||||    
T  2984392 ttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattattttttatttttt 2984474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 9460599 - 9460655
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacaca 194  Q
    |||||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||    
T  9460599 gatcctctccatttggtaaaataaatagag-tatgcaatttggagagagatagacaca 9460655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 17247476 - 17247397
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||||| |||||||||| || ||||| ||| ||||||||| ||  || ||| ||||||||| |||||||||||    
T  17247476 gagagagatagacgcaaaaaataggtggtgggttctatcattaagtgcgttccatcataattaattattttttacttttt 17247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 35650430 - 35650308
Alignment:
Q  136 agatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacca 235  Q
    |||||||||||||||  |||||||||| ||| || |||| | | | | ||||||||||||||||||| || |||||||||  ||||| ||  | ||||||    
T  35650430 agatcctctccatttattaaaataaatggagatt-gcaattagaaaaaagatagacacaaaaaataggtggtgggtcctattattaaatgaatttcacca 35650332  T
Q  236 tcattaattatattttactttttt 259  Q
    ||||||||||| ||| | ||||||    
T  35650331 tcattaattatttttaaatttttt 35650308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 3041302 - 3041391
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaataga-tgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttt 257  Q
    |||||| ||||||||||||||| ||||||||   | || ||||||||| || |||| ||||| |||||||||||||||| ||||| ||||    
T  3041302 ttgcaatttggagagagatagatacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttattttt 3041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 19179531 - 19179462
Alignment:
Q  183 gagatagacacaaaaaataga-tgatgggtcctaccattaagtgggtctcaccatcattaattatatttt 251  Q
    |||||||||| |||||||| | |||| |||| ||  ||||||||||||||||||||||||||||| ||||    
T  19179531 gagatagacaaaaaaaataaaatgataggtcttattattaagtgggtctcaccatcattaattatttttt 19179462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 10242811 - 10242752
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||||||||| | ||||||||||| | ||||||||  |||||||||||||    
T  10242811 tgtgtctttatctctccaaatggtagaaatggagagaaacataaat-aagaggatcctaac 10242752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 23253778 - 23253717
Alignment:
Q  264 atttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||| |||||||| ||||||||||||| | ||||||||||||| |  |||||||| ||||||    
T  23253778 attttatgtgtctctatctctccaaatggtagaaatggagaaaaatttaaatggataggatc 23253717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 4348120 - 4348176
Alignment:
Q  274 tctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||||||||||  || |||| |||||| |||||||| ||||||||| ||||    
T  4348120 tctttatctctccaaatgtaacaaattgagaaagacataaatagagaggatcttaac 4348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 9465810 - 9465746
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||||||||| ||||||| || ||| ||||| |||||| ||  | |||||||||||||||||    
T  9465810 agagatagacacataaaataggtggtggatcctatcattaaatgaatttcaccatcattaattat 9465746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 38283831 - 38283887
Alignment:
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||| ||||||||||||||| | ||||||||||| |  |||||| ||||||||    
T  38283831 atgtgtctatatctctccaaattgtaaaaatggagaaaaatttaaatgaagaggatc 38283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 208182 - 207980
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  208182 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtc 208083  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     || |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  208082 ccatcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 207983  T
Q  330 ccc 332  Q
    |||    
T  207982 ccc 207980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 3e-89; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 4804567 - 4804365
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4804567 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 4804468  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4804467 ccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcctaa 4804368  T
Q  330 ccc 332  Q
    |||    
T  4804367 ccc 4804365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 7162203 - 7162001
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| | ||||||||||    
T  7162203 gggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtc 7162104  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  7162103 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacgtaaatagagaggatcctaa 7162004  T
Q  330 ccc 332  Q
    |||    
T  7162003 ccc 7162001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 131 - 332
Target Start/End: Original strand, 1249105 - 1249304
Alignment:
Q  131 ggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtct 230  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| |||||  ||||||||||| |||||||||||| ||||||||||     
T  1249105 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagacagaca--aaaaatagatggtgggtcctaccactaagtgggtcc 1249202  T
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  1249203 caccatcattaattatattttacttttttcaagattttatgtgtctttatctttccaaattgaagaaatggagaaacacataaatggagaggatcttaac 1249302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 21159325 - 21159523
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  21159325 gggtgaagatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 21159424  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    ||||||||| ||||||||||||||    
T  21159425 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatatctccaaattgaagaaatgg----acacataaacggagaggatcctaa 21159520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 130 - 309
Target Start/End: Complemental strand, 17944281 - 17944102
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||    
T  17944281 gggtgaagatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtc 17944182  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacac 309  Q
     |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  17944181 ccaccatcattaattatattttactttttccaagattttatgtgtttttatctctccaaattgaagaaatggagaaacac 17944102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 12412756 - 12412582
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||     
T  12412756 gggtaaagatcttctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggtt 12412657  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
     |||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||    
T  12412656 ccaccatcattaattatattttacttttttcaaaattttatgtatttttatctctccaaattgaagaaatggaga 12412582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 133 - 325
Target Start/End: Complemental strand, 27826654 - 27826462
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctca 232  Q
    |||||||||||||||||||||||||||| |  || |||||||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||| ||    
T  27826654 tgaagatcctctccatttggtaaaataactgaagatttgcaaggttgagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtccca 27826555  T
Q  233 ccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||||||||||||||| |||||  ||  ||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  27826554 ccatcattaattatattttattttttaaaattttttatgtgtctttatctctcaaaatggaagaaattgagaaacacataaatggagaggatc 27826462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 29698220 - 29698080
Alignment:
Q  192 acaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaatt 291  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  29698220 acaaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatttctccaaatt 29698121  T
Q  292 gaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29698120 gaagaaatggagaaacacataaatggagaggatcctaaccc 29698080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 129 - 332
Target Start/End: Complemental strand, 32737977 - 32737791
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |                   
T  32737977 tgggtgaagatcctctccatttggcaaaataaatagagttttgcaggttggagagagatagacacaaaaaatagatggtgggttc--------------- 32737893  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
      |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32737892 --caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatccta 32737795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 13089705 - 13089901
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |    
T  13089705 gggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggcc 13089804  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatg-gagaaacacataaatggagaggatccta 328  Q
     |||||||||||||||||||||| ||||||||| |||| |||||| ||         ||||||||||||||  ||||||||||||||| |||||||||||    
T  13089805 ccaccatcattaattatattttatttttttcaaaattttatgtgtttt---------aaattgaagaaatgaaagaaacacataaatgaagaggatccta 13089895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 133 - 324
Target Start/End: Original strand, 227522 - 227714
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctc 231  Q
    ||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||| |||||||| |||||||||||| ||||||| || |    
T  227522 tgaagatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatccc 227621  T
Q  232 accatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | ||||||| ||||| |||||| |||||||| | ||  ||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||    
T  227622 atcatcattgattattttttacctttttcaaaactttgtgtgtctatatctctccaaattgtagaaatggagaagcacataaatgaagaggat 227714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 142 - 306
Target Start/End: Complemental strand, 30460930 - 30460763
Alignment:
Q  142 tctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgg----gtcctaccattaagtgggtctcaccatc 237  Q
    ||||||||||  ||||||||| |||||| |||| ||||||| ||||||||||||||| ||| ||||||     |||||||||||| || ||| | || |     
T  30460930 tctccatttgacaaaataaatggagttt-gcaatttggagaaagatagacacaaaaagtagttgatggatccatcctaccattaaatgagtcccgccgtt 30460832  T
Q  238 attaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaa 306  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  30460831 attaattatattttacttttttcaagattttatgtgtctttatctctccaaatagaagaaatgaagaaa 30460763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 13888477 - 13888603
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtggg 227  Q
    ||||| ||||||||||| || || |||||||||| ||||||||||| ||||||||||||| |||||||| |||||||| ||| |||||||||||| ||||    
T  13888477 tgggttaagatcctctcaatatgctaaaataaatagagttttgcaatttggagagagatatacacaaaataatagatggtggttcctaccattaactggg 13888576  T
Q  228 tctcaccatcattaattatattttact 254  Q
    || || ||||||||||||| |||||||    
T  13888577 tcccatcatcattaattattttttact 13888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 2800574 - 2800740
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    ||||||||||||||| |||||| ||| ||  |   ||| ||||||||||||||||||| |||||||||  ||| || |||||||||||||||| ||||||    
T  2800574 gatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggtcccaccat 2800673  T
Q  237 cattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
    |||| ||||| |||||||||||||||  |||  || || | |||||||||||| || |||||||||||    
T  2800674 cattgattattttttacttttttcaattttttttgagtttatatctctccaaa-tggagaaatggaga 2800740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 24484959 - 24484870
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||||  || ||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  24484959 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 24484870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 304
Target Start/End: Original strand, 7215816 - 7215981
Alignment:
Q  138 atcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatc 237  Q
    |||||||||||||| |||||||||| ||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||| |||||| ||| |||    
T  7215816 atcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatc 7215915  T
Q  238 attaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
    ||||||||  |||||||||||  ||||     || |||| |||||||||||| ||||||||||||||    
T  7215916 attaattacgttttactttttctaagaaaatttgagtctatatctctccaaa-tgaagaaatggaga 7215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 17828524 - 17828719
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||| |||||||||| ||||||||| ||||| | |||| | |||| ||||||||||||||||||| |||||||||  ||| | |||| ||||||||| |    
T  17828524 tgggtaaagatcctctacatttggtataataattggagtat-gcaatttggagagagatagacacataaaatagatagtggattctactattaagtggat 17828622  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    | || ||||| ||||||  ||||| |||||| ||  |||  ||||||| |||| ||||||||  | |||||||||| |   ||||||||||||||||    
T  17828623 cccatcatcaataattaatttttagttttttgaaatttttgtgtgtctatatcactccaaatgaatgaaatggagagaataataaatggagaggatc 17828719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 2142288 - 2142377
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||||  || ||||||| | ||||| ||||||  |||||||||||||||| |||||||||||    
T  2142288 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattattttttacttttt 2142377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 1516163 - 1516251
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccat 219  Q
    |||| |||||||| ||||||||| ||||||||| |||||| |||| |||||||||||| || |||||||||||||| ||| ||| |||||    
T  1516163 gggttaagatcctatccatttggcaaaataaatggagttt-gcaatttggagagagatggatacaaaaaatagatggtggatcccaccat 1516251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 1518252 - 1518340
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccat 219  Q
    |||| |||||||| ||||||||| ||||||||| |||||| |||| |||||||||||| || |||||||||||||| ||| ||| |||||    
T  1518252 gggttaagatcctatccatttggcaaaataaatggagttt-gcaatttggagagagatggatacaaaaaatagatggtggatcccaccat 1518340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 32254033 - 32254115
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| |||||||||| |||||| || || ||||||||| ||||||||| ||| ||| |||||||||||| ||||| |||||    
T  32254033 ttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaattattttttatttttt 32254115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 1518335 - 1518404
Alignment:
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatg 300  Q
    ||||||||||||||||||||||||||||| || |||| |||||| ||||||| | |||||  ||||||||    
T  1518335 caccatcattaattatattttactttttttaaaattttatgtgtatttatcttttcaaatgaaagaaatg 1518404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 28696624 - 28696680
Alignment:
Q  142 tctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaa 199  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  28696624 tctccatttggcaaaataaattgag-tttgcaatttggagagagatagacaaaaaaaa 28696680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 1516246 - 1516314
Alignment:
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaat 299  Q
    ||||||||||||||||||||||||||||| || |||| |||||| ||||||| | |||||  |||||||    
T  1516246 caccatcattaattatattttactttttttaaaattttatgtgtatttatcttttcaaatgaaagaaat 1516314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 17398774 - 17398824
Alignment:
Q  254 ttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
    |||||||||||||| |||||||||||||||||||||| || |||| |||||    
T  17398774 ttttttcaagattttatgtgtctttatctctccaaatggaggaaagggaga 17398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 1515497 - 1515572
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatg 205  Q
    ||||| |||||||| || |||||| ||||||||| |||||| |||| |||||||||||| || | ||||||||||||    
T  1515497 tgggttaagatcctatcaatttggcaaaataaatggagttt-gcaatttggagagagatggataaaaaaaatagatg 1515572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  138 atcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacaca 194  Q
    ||||||||||||||||| ||||||| ||| | ||||| |||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatggag-tatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 27096049 - 27096007
Alignment:
Q  204 tgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||||||||| |||||| || ||||||||||||||||||||    
T  27096049 tgatgggtcctatcattaaatgagtctcaccatcattaattat 27096007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 28696736 - 28696782
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatg 316  Q
    |||||||||||||||||||||   ||||||||||| |||||||||||    
T  28696736 tgtgtctttatctctccaaatgatagaaatggagagacacataaatg 28696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 7098190 - 7098263
Alignment:
Q  169 ttgcaagttggagagagatagac-acaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||| | ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  7098190 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 7098263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 7545718 - 7545645
Alignment:
Q  169 ttgcaagttggagagagatagaca-caaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| ||||||||||||||||| |||||||||  || ||||||||| || ||||||| || ||| |||||||    
T  7545718 ttgcaatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 12734478 - 12734358
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattt-tacttttttcaagatttaatgtgtcttt 278  Q
    ||||||||||| ||||||| ||||| ||||  |||| || ||||||  || |||||||||||||||| ||| ||  ||||||||  ||||  || |||||    
T  12734478 agagagatagaaacaaaaactagataatgga-cctatcactaagtgaatcccaccatcattaattatttttatatatttttcaattttta--gtatcttt 12734382  T
Q  279 atctctccaaattgaagaaatgga 302  Q
    |||||||||| | |||||||||||    
T  12734381 atctctccaattagaagaaatgga 12734358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 13888611 - 13888663
Alignment:
Q  272 tgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||| ||||||||||||| | ||||||| ||||  |||||||||||||||||    
T  13888611 tgtctatatctctccaaatggtagaaatgaagaaggacataaatggagaggat 13888663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 17275981 - 17275921
Alignment:
Q  239 ttaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaat 299  Q
    |||||||| ||||| |||||| ||||||| |||  ||||||||||||||||| ||| ||||    
T  17275981 ttaattattttttattttttttaagattttatgcatctttatctctccaaatagaataaat 17275921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 35316944 - 35316742
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  35316944 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtc 35316845  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35316844 ccaccatcattaattatattttacttttttcaagattttatatgtctttatctctccaaattgaagaaatggagaaacacgtaaatggagaggatcctaa 35316745  T
Q  330 ccc 332  Q
    |||    
T  35316744 ccc 35316742  T

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Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 133 - 325
Target Start/End: Complemental strand, 13238797 - 13238605
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctca 232  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||    
T  13238797 tgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtccca 13238698  T
Q  233 ccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  13238697 ccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaattgaagaaattgagaaacgcataaatggagaggatc 13238605  T

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Target: chr2; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 28565011 - 28564815
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||  |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28565011 gggtgaagatcctctccatttggcaaaataaatggagttttttaagttgtagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 28564912  T
Q  230 tcaccatcattaattatattttactttttt-caagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
     |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28564911 ccaccatcattaattatattttacttttttaaaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 28564815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 23259443 - 23259645
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||| ||    
T  23259443 gggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatc 23259542  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||| ||||||| || |||||||||| ||| |||||||||||||| ||||||  ||||||| ||| ||| ||||    
T  23259543 ccaccatcattaattatattttactttttttaagattttatatgtctttatccctcaaaattgaagaaatgaagaaacgtataaatgaagatgattctaa 23259642  T
Q  330 ccc 332  Q
    |||    
T  23259643 ccc 23259645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 39465801 - 39465699
Alignment:
Q  223 gtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagg 322  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  39465801 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaaaaaatggagaaacacataaatggagagg 39465702  T
Q  323 atc 325  Q
    |||    
T  39465701 atc 39465699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 41983401 - 41983497
Alignment:
Q  235 atcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41983401 atcattaattatattttacttttttcaagattta-tgtgtctttatctctccaaattaaagaaatggagaaacacataaatggagaggatcttaaccc 41983497  T

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Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 45625035 - 45625216
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||| ||  |||||||                    
T  45625035 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaagaaataaattgtgggtcc---------------- 45625118  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||| |||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||     |||||||||||||    
T  45625119 -caccatcattaattttattttatatttttcaagattttacgtgtctttatctctctaaattgaagaaatggagaaacacatt----gagaggatcctaa 45625213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 11864988 - 11864841
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||||||||   ||||||||| ||||||| ||||||||||||||||||||||||||||||||||        ||||| ||| || |||    
T  11864988 gggtgaagatcctctccatttatcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatg--------taccactaaatgagtc 11864897  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctc 285  Q
    ||||||||||  ||||||||||||||||| |||||||| || | ||||| ||||||    
T  11864896 tcaccatcatggattatattttactttttccaagattttatttatctttgtctctc 11864841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 374499 - 374585
Alignment:
Q  235 atcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||  |||||| ||||||||||||||||||||||    
T  374499 atcattaattatattttacttttttcaagattttatgtgtttttatctctctaaatgaaagaaagggagaaacacataaatggagag 374585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 2063473 - 2063343
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagat-gatgggtcctaccattaagtggg 227  Q
    ||||| |||||||||| ||||||  ||||||||| |||||| |||| ||||||||||||||||||||||||||||| | | ||||||||||  |||||||    
T  2063473 tgggttaagatcctcttcatttgacaaaataaatagagttt-gcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtggg 2063375  T
Q  228 tctcaccatcattaattatattttactttttt 259  Q
    |  ||||||||||||| ||||| |||||||||    
T  2063374 ttccaccatcattaataatattatactttttt 2063343  T

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Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 8988935 - 8988791
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||||| || |||||||||| |||||||||||||||| ||||| ||||               
T  8988935 ttgcaatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttattttt----------- 8988847  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| |||| ||| |||||||||||   |||||||||||||||    
T  8988846 atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 8988791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 375073 - 374932
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||||||||||||||||||||||||  || |||||||||  | |||||||||| |||||||||||||||| |||||||||||              
T  375073 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttacttttt---------- 374984  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
    ||||||||||||||||| |||| ||| |||||||||||   |||||||||||    
T  374983 atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggaga 374932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 10877721 - 10877619
Alignment:
Q  231 caccatcattaattatattttacttttttca--agatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    |||||||||||||||||||| | ||||||    | |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10877721 caccatcattaattatatttcatttttttttttaaattttatgtgt-tttatctctccaaattgaagaaatggagaaacacataaatgaagaggatccta 10877623  T
Q  329 accc 332  Q
    ||||    
T  10877622 accc 10877619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 2061382 - 2061296
Alignment:
Q  244 tatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||| ||  |||||||||||||||| ||||    
T  2061382 tatattttacttttttcaagattttatgcgtctttatctctccaaatggaagaaattgagatactaataaatggagaggatcttaac 2061296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 320
Target Start/End: Complemental strand, 38397199 - 38397012
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||||||||| ||| ||||||  |||| | |||| ||| ||||||||||||| | |||||||||  ||||| |||| |||||||| |||    
T  38397199 gggtaaagatcctctccattttgtataataaacggagtat-gcaatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtc 38397101  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
     |||||||| ||||||  |||||  |||||||| ||||  | ||||| |||||||||||||||| |||||||||| | | |||||||||||    
T  38397100 ccaccatcaataattacttttta-gtttttcaa-attttttttgtctatatctctccaaattgatgaaatggagagaaaaataaatggaga 38397012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 21454475 - 21454582
Alignment:
Q  153 taaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttta 252  Q
    |||||||||| |||||| | || || |||||||||||||||||||| |||||  |||||| |||||||||||||||  |||||||||||||||| |||||    
T  21454475 taaaataaatggagttt-gtaatttagagagagatagacacaaaaa-tagattgtgggtcataccattaagtgggttccaccatcattaattatttttta 21454572  T
Q  253 cttttttcaa 262  Q
    ||||||||||    
T  21454573 cttttttcaa 21454582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 4446860 - 4446980
Alignment:
Q  138 atcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatc 237  Q
    |||||||||||||| |||||||||| ||  | | ||| ||| ||||||||||||||| |||||||||  ||| |||||||| ||| ||||| |||| |||    
T  4446860 atcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtttcactatc 4446959  T
Q  238 attaattatattttacttttt 258  Q
    ||||||||| |||||||||||    
T  4446960 attaattattttttacttttt 4446980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 330
Target Start/End: Complemental strand, 19908897 - 19908699
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||| |||||| || ||||||| |||| | |||| |||||| |||||||||||| |||||||||  || |||||||  |||||||||||    
T  19908897 gggtaaagatcctcttcatttgatataataaatggagtat-gcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtgggtc 19908800  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||||||||||||||| ||||| | |||| ||  |||  ||| ||| |||||||| |||| || |||||| ||| |   |||||||||||||||| |||    
T  19908799 ccaccatcattaattattttttagtgttttgaaatttttgtgtatctatatctctctaaatggatgaaatgaagagaataataaatggagaggatcttaa 19908700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 23459841 - 23459986
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||||||||||||||||||||||||  ||  |||||||| || ||| |||||| |||||||||||||||| |||||||||||              
T  23459841 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt---------- 23459930  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    |||||||||||||||||  ||| ||| |||||||||||   |||||||||||||||    
T  23459931 atgtgtctttatctctctgaatggaacaaatggagaaatttataaatggagaggat 23459986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 30709183 - 30709100
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt 259  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||||||| || |||||||||||||| | ||||||||||||    
T  30709183 ttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcccaccatcattaattgttttttactttttt 30709100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 12949482 - 12949389
Alignment:
Q  236 tcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| | ||||| ||||||| ||||| ||||||| |||| ||||    
T  12949482 tcattaattat-ttttacttttttcaagattttatgtatctttatctctccaaataggagaaacggagaaagacatagatggagaagatcttaac 12949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 29188734 - 29188588
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaataga-tgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattt 267  Q
    |||||| ||||||||||||||||||||||||   | || || |||||| || |||| ||||| |||||||||||||||| |||||||||||             
T  29188734 ttgcaatttggagagagatagacacaaaaaaacaagtggtgcgtcctatcactaagcgggtcccaccatcattaattattttttacttttt--------- 29188644  T
Q  268 aatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
     ||||||||||||||||| |||| ||| |||||||||||   |||||||||||||||    
T  29188643 -atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 29188588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 40640783 - 40640706
Alignment:
Q  136 agatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtc 212  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||||||||||| | |||||| |||||||| ||||||    
T  40640783 agatcctctccatttgttaaaataaatggagttttgcaatttggagagagatatatacaaaagaatagatggtgggtc 40640706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 30857642 - 30857763
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    ||||||||||||||   ||||||||| |||| | | || ||| |||||| |||||||||||||||||| |||| |||||| ||||| ||| || ||||||    
T  30857642 gatcctctccatttcacaaaataaatggagtat-gtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcacaccat 30857740  T
Q  237 cattaattatattttactttttt 259  Q
    |||||||||| || || ||||||    
T  30857741 cattaattattttatattttttt 30857763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 330
Target Start/End: Original strand, 34512027 - 34512180
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtc 275  Q
    ||||||| ||||||||||| |||||||||  |||||  ||| ||||||| |||||||| |||||||||| | ||||||||||| ||| |||   ||| ||    
T  34512027 ttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaattgttttttactttttccaa-attatttgtatc 34512125  T
Q  276 tttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    | ||||||||||||| || |||| ||| | |   |||||||||||||||| ||||    
T  34512126 tatatctctccaaatggaggaaacggacagaattataaatggagaggatcttaac 34512180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 258
Target Start/End: Original strand, 36758816 - 36758945
Alignment:
Q  128 ctgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtggg 227  Q
    |||||| ||||||||||||||||   ||||||||| ||  || |||| ||||||||||||||||||||||| ||  || ||| ||||| | ||| |||||    
T  36758816 ctgggtaaagatcctctccatttataaaaataaatggaagtt-gcaatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtggg 36758914  T
Q  228 tctcaccatcattaattatattttacttttt 258  Q
    |  ||| |||||||||||| |||||||||||    
T  36758915 ttccacaatcattaattattttttacttttt 36758945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 36929823 - 36929706
Alignment:
Q  141 ctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatt 240  Q
    |||||||||| | ||||||||| |||| | |||| ||||||||||||||||||| ||||||| |  || ||||||||||||| ||| |  | ||||||||    
T  36929823 ctctccatttagcaaaataaatggagtat-gcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcatt 36929725  T
Q  241 aattatattttactttttt 259  Q
    |||||  ||||||||||||    
T  36929724 aattactttttactttttt 36929706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 35315581 - 35315493
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||| ||||||||||||| ||||||| ||||| || ||||||||| ||||||||| |||   ||||| |||| ||| |||||||||||    
T  35315581 tgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtccttccatcgttaactattttttacttttt 35315493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 38824145 - 38824061
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcc 213  Q
    |||| |||||| |||| ||||| |||||||||| |||||||| || ||||||||||||||||| |||| |||| ||| |||||||    
T  38824145 gggttaagatcatctctatttgctaaaataaatggagttttgtaatttggagagagatagacaaaaaagaataaatggtgggtcc 38824061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 42075458 - 42075510
Alignment:
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||||||||||||    
T  42075458 atgtgtctttatctctccaaatggaagaaatggataaactaataaatggagag 42075510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 15709847 - 15709772
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta 245  Q
    ||||| ||||||||||||| ||| | |||||||||  ||| ||||||||||||||||||  || ||||||||||||    
T  15709847 tgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 673222 - 673185
Alignment:
Q  295 gaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  673222 gaaatggagaaacacataaatggagaggatcttaaccc 673185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 4603114 - 4603187
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttta 252  Q
    |||||||||||||| | | |||| || ||| || |||||||||  |||||| ||||||||||||||||||||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaattatatttta 4603187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 13780579 - 13780506
Alignment:
Q  169 ttgcaagttggagagagatagacacaa-aaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||||||| ||||||  || ||||||||| || ||||||| || |||||||||||    
T  13780579 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 13780506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 19905981 - 19905889
Alignment:
Q  148 tttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    ||||||| ||||||| |||| | |||| || |||||||||||||||| |||||||||| |||| | ||  |||||||| ||| |||||||||||    
T  19905981 tttggtataataaatggagtat-gcaattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 35315284 - 35315372
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||| ||| ||||||||||||||| ||||||||| |||| || ||| ||||| || ||| |||||| ||||||||  ||||| |||||    
T  35315284 tgcaatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaattactttttaattttt 35315372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 31618769 - 31618851
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||| ||||||| | | |||||||||  || ||| || ||||||||| ||| ||| |||||||||||| |||||||||||    
T  31618769 ttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagtcccacaatcattaattattttttacttttt 31618851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 40254144 - 40254217
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||| ||||||||||||||||| ||||  || ||||||||| || ||||||| || |||||||||||    
T  40254144 ttgcaatttggggagagatagacacaaaataataagtggtgggtcctatcactaagtggatcccaccatcatta 40254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 157409 - 157353
Alignment:
Q  274 tctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||| ||||||||||| ||| ||||||||||| ||||||| || ||||||| ||||    
T  157409 tctttttctctccaaatagaacaaatggagaaagacataaagggggaggatcttaac 157353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 30840935 - 30840872
Alignment:
Q  194 aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||  || ||||||||| || |||||| |||||||||| ||||||||| |||||||||||    
T  30840935 aaaaaataagtggtgggtcctatcactaagtgagtctcaccat-attaattattttttacttttt 30840872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 41072961 - 41073021
Alignment:
Q  186 atagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||| | ||||||| || ||||||||| |||||| ||| |||||| ||||||||||||    
T  41072961 atagacatataaaatagttggtgggtcctatcattaaatggatctcacaatcattaattat 41073021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 129 - 332
Target Start/End: Complemental strand, 21151272 - 21151069
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||  || |||||||| |||||||||    
T  21151272 tgggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggt 21151173  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21151172 cccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagaatccta 21151073  T
Q  329 accc 332  Q
    ||||    
T  21151072 accc 21151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 131 - 332
Target Start/End: Original strand, 45260384 - 45260586
Alignment:
Q  131 ggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtct 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||| ||     
T  45260384 ggtgaagatcctctccatttggcaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcc 45260483  T
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagg-atcctaa 329  Q
    || |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  45260484 catcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatagagaggaatcctaa 45260583  T
Q  330 ccc 332  Q
    |||    
T  45260584 ccc 45260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 12139446 - 12139245
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagt-gggt 228  Q
    |||||||||| |||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  12139446 gggtgaagattctcttcatttggcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggt 12139347  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | ||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12139346 cccaccatcattaattatattttactttttttaagattttatgtg--tttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 12139249  T
Q  329 accc 332  Q
    ||||    
T  12139248 accc 12139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 129 - 321
Target Start/End: Original strand, 9559009 - 9559201
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  9559009 tgggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggt 9559108  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  9559109 cccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatggaagaaatcgagaaacatataaatggagag 9559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 130 - 329
Target Start/End: Complemental strand, 16366637 - 16366438
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| |||||||| |||||| |||    
T  16366637 gggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtc 16366538  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16366537 ccaccatcattaattatattttacttttttcaagattttacgtgtttttatctctccaaattgaagaaatggagaaacacataaatggagatgatcctaa 16366438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 130 - 320
Target Start/End: Complemental strand, 7362686 - 7362497
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||| ||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| ||| |||||     
T  7362686 gggtgaagatc-tctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggtt 7362588  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7362587 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 7362497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 44648083 - 44647882
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||||||    
T  44648083 gggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtc 44647984  T
Q  230 t--caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcct 327  Q
    |  | ||||||||||||||||||||| ||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |    
T  44647983 tccctccatcattaattatattttacatttttcaagattttatgtgtctttatct---caaattgaagaaatggagaaacacataaatggagaggatcat 44647887  T
Q  328 aaccc 332  Q
    |||||    
T  44647886 aaccc 44647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 133 - 330
Target Start/End: Original strand, 47226035 - 47226229
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctca 232  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||  ||| ||||||| |||| ||| |||||| ||    
T  47226035 tgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaat--atggtgggtcccaccactaaatgggtccca 47226132  T
Q  233 ccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47226133 ccatcattaattatattttactttttccaagattttatgtgt-tttatctctccaaattgaagaaatagagaaacacataaatggagaggatcctaac 47226229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 4888586 - 4888391
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| ||||    
T  4888586 gggtgaagatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtc 4888487  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
     ||||||||||||||||||||||  ||||| ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  4888486 ccaccatcattaattatattttatgttttttaagattttatgtgtctttatctctccaaatggaagaaattgagaaacacataaatgaagaggatc 4888391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 18198375 - 18198180
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| | |||||||||||||||||||| ||||| || ||| |||||| |||    
T  18198375 gggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgagtc 18198276  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
     |||||||||||||||||||||| |||||||||||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18198275 ccaccatcattaattatattttatttttttcaagattttatgtgattttatctctacaaattgaagaaatggagaaacacataaatggagaggatc 18198180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 138 - 332
Target Start/End: Original strand, 25084690 - 25084886
Alignment:
Q  138 atcctctccatttggtaaaataaa--ttgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacca 235  Q
    ||||||||||||||| |||| |||  |  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||    
T  25084690 atcctctccatttggaaaaaaaaaaataaagttttgtaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccacca 25084789  T
Q  236 tcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||| || |||||||||||||||||||||||||||||| ||||||    
T  25084790 tcattaattatattttatttttttcaaaattttatgtgtctttatctcttcaaattaaaaaaatggagaaacacataaatggagaggatcataaccc 25084886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 130 - 324
Target Start/End: Complemental strand, 33450626 - 33450431
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggt 228  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| |||| |||||||||    
T  33450626 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 33450527  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | || ||||||||||||| ||||| ||||||||| ||||  ||||| | ||||||||||||| | ||||||||||||  ||||||||| |||||||    
T  33450526 cccatcatcattaattattttttatttttttcaaaattttgtgtgtttatatctctccaaatggtagaaatggagaaggacataaatgaagaggat 33450431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 130 - 324
Target Start/End: Original strand, 47500238 - 47500433
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggt 228  Q
    |||| ||||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||||| |||||||| ||||||| |||| |||||||||    
T  47500238 gggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 47500337  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | || ||||||||||||| ||||| ||||||||| ||||  ||||||| |||||||| |||| | ||||||||||||  |||||||||||||||||    
T  47500338 cccatcatcattaattattttttatttttttcaaaattttgtgtgtctatatctctctaaatggtagaaatggagaaggacataaatggagaggat 47500433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 126 - 330
Target Start/End: Complemental strand, 29631168 - 29630967
Alignment:
Q  126 ttctgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtg 225  Q
    |||||||| || ||||||||||||||||||||||||| |||||| |||| ||| |||||  ||||||||||| ||||||  ||||||| |||| || ||     
T  29631168 ttctgggttaatatcctctccatttggtaaaataaatggagttt-gcaatttgaagaga--tagacacaaaacatagatagtgggtccaaccactatgta 29631072  T
Q  226 ggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||| ||| ||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||  |||||||||||||| |||| |||||||||||||    
T  29631071 ggtcccactatcattaattattctttacttttttcaaaattttatgtgtctttatatctccaaatgaaagaaatggagaaagacatgaatggagaggatc 29630972  T
Q  326 ctaac 330  Q
     ||||    
T  29630971 ttaac 29630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 34985909 - 34986095
Alignment:
Q  138 atcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||  |||| ||| || ||| || |||    
T  34985909 atcctctcaatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcat 34986008  T
Q  237 cattaattatatttta-cttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    |||||||||| |||||  ||||||||| ||||  | ||||| ||||||||||||| | ||||||||||||| |||||||||||||||||    
T  34986009 cattaattattttttattttttttcaaaattt--tatgtctatatctctccaaatggtagaaatggagaaagacataaatggagaggat 34986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 148 - 325
Target Start/End: Complemental strand, 32916056 - 32915883
Alignment:
Q  148 tttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattata 247  Q
    ||||||||||||||| |||  | |||| ||| |||||||||||||||||||||| ||  ||||||||||||||||||| ||| ||||||||| |||||||    
T  32916056 tttggtaaaataaatggaggat-gcaatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattata 32915958  T
Q  248 ttttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    ||||   ||||| ||  |||  ||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||    
T  32915957 tttt---tttttaaaacttttttgtgtctttatctctccaaatggaagaaatggagaagaacataaatggggaggatc 32915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 39855768 - 39855906
Alignment:
Q  128 ctgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtggg 227  Q
    |||||| ||||| |||| ||||||  ||| ||||| |||||| | || ||||||||||||||||||| |||| ||||| | |||||||||| ||||||||    
T  39855768 ctgggttaagattctcttcatttgacaaattaaatggagttt-gtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtggg 39855866  T
Q  228 tctcaccatcattaattatattttacttttttcaagattt 267  Q
    || || |||||||||||| |||||||||||||||||||||    
T  39855867 tcccatcatcattaattaaattttacttttttcaagattt 39855906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 47799895 - 47799984
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  47799895 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 47799984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 30588615 - 30588526
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||  ||||||||||||||||||||  ||| |||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  30588615 ttgcaatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 30588526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 989239 - 989132
Alignment:
Q  138 atcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatc 237  Q
    ||||||||||||||  ||| ||||| |||||| |||| |||||||||||||||||||||||||| ||  |||||||||||| ||||| ||||  |||||     
T  989239 atcctctccatttgacaaattaaatggagttt-gcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  238 attaattat 246  Q
    |||||||||    
T  989140 attaattat 989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 47080509 - 47080360
Alignment:
Q  169 ttgcaagttggagagagatagacacaa-aaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattt 267  Q
    |||||| |||||||||||||||||||| |||| |  |||||||||||| || |||| ||||| ||||||||||||||   ||||| ||||||  |  |||    
T  47080509 ttgcaatttggagagagatagacacaaaaaaacaagtgatgggtcctatcactaagcgggtcccaccatcattaatt---ttttatttttttttactttt 47080413  T
Q  268 aatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
     |||||||| |||||||| |||| ||| |||||||||||   |||||||||||    
T  47080412 tatgtgtctctatctctctaaatagaacaaatggagaaatttataaatggaga 47080360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 330
Target Start/End: Original strand, 33608845 - 33609033
Alignment:
Q  142 tctccatttggtaaaataaattgagttttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatt 240  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||| |||| ||||||||||||   | | |||| |  | ||| ||  ||||||||||    
T  33608845 tctccatttggtaaaataaatggag-tttgcaatttggagagagataaacacaaaaaaatagatggaagatactactaccaggtgagttccaccatcatt 33608943  T
Q  241 aattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||| || ||||||||| || |     ||| ||||||||| ||||||| ||||||||||||| | ||||||||| | |||||| ||||    
T  33608944 aattattttatacttttttaaaaaaaatttgtatctttatctttccaaatggaagaaatggagagaaacataaatgtaaaggatcttaac 33609033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 46802336 - 46802445
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtcttt 278  Q
    |||||||||||||| |||||||||| | |||||||||||| |||||||||| ||||| | |||||||| || | |||| |||||  |||  ||||| |||    
T  46802336 gagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattattttatgctttcttcaaacttt--tgtgttttt 46802433  T
Q  279 atctctccaaat 290  Q
    ||||||||||||    
T  46802434 atctctccaaat 46802445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 47271107 - 47271178
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatg 205  Q
    |||||||||||||||||| | ||||||||| |||||| |||| ||||||||||||||||||||||||| ||||    
T  47271107 tgaagatcctctccatttagcaaaataaatggagttt-gcaatttggagagagatagacacaaaaaattgatg 47271178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 19889029 - 19889174
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| || || ||||||||| ||||||||||  |  ||||||||| || |||||||||  |||||||||||||||| |||||||||||              
T  19889029 ttgcaatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattattttttacttttt---------- 19889118  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| |||| ||| |||||||||||   ||| |||||||||||    
T  19889119 atgtgtctttatctctctaaatggaataaatggagaaatttatagatggagaggat 19889174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 40019699 - 40019626
Alignment:
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
    |||||||||||||||  || |||||||||||||||||  ||||| ||||||||||||||| || ||||| ||||    
T  40019699 caccatcattaattactttatacttttttcaagattttttgtgtttttatctctccaaatggaggaaattgaga 40019626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 40023258 - 40023342
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttca 261  Q
    ||||||| ||||||||| | ||||||| | |||| || |||||||||||||||| ||||| |||||||||| |||| |||||||||    
T  40023258 ttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtcccaccaccattaattat-tttttcttttttca 40023342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 19027685 - 19027751
Alignment:
Q  176 ttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||||||||||||||| |||||||| ||| ||||||||| || ||||||| || |||||||||||    
T  19027685 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 20726951 - 20726885
Alignment:
Q  176 ttggagagagatagacacaaaaaa-tagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||||||||||||||||||||| || ||| ||||||||| || ||||||| || |||||||||||    
T  20726951 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 6882153 - 6882214
Alignment:
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||||||||| ||||| ||| |||||||||||   |||||| ||||||||||||||    
T  6882153 atgtgtctttatctcttcaaatggaacaaatggagaaagttataaattgagaggatcctaac 6882214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 8149688 - 8149599
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt 259  Q
    ||||| ||| ||||||||||| ||  ||||||  |  |||||| || ||||||||||||| |||||||||||||||| |||||| |||||    
T  8149688 tgcaatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaattattttttaccttttt 8149599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 14696752 - 14696825
Alignment:
Q  169 ttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||||| ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  14696752 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 14696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 330
Target Start/End: Complemental strand, 32916236 - 32916098
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatc 281  Q
    ||||||| |||| |||||||| |  |||||| ||||| ||||||| |  |||||||||||||||| ||||| |||||           ||||| ||||||    
T  32916236 agagatacacacgaaaaataggttgtgggtcataccactaagtggattccaccatcattaattattttttattttttg----------tgtgtatttatc 32916147  T
Q  282 tctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||| |||| |||||||||||||||   ||||||||||||||| |||||    
T  32916146 tctcaaaatggaagaaatggagaaagttataaatggagaggattctaac 32916098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 7712363 - 7712438
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta 245  Q
    ||||| || |||||||||||| ||| || ||||||  || |||||||||||||||||||  ||||||| |||||||    
T  7712363 tgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccatctttaatta 7712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 11828945 - 11828992
Alignment:
Q  210 gtcctaccattaagtgggtctcaccatcattaattatattttactttt 257  Q
    |||||||||||||||||||  |||||||||||||||| ||||| ||||    
T  11828945 gtcctaccattaagtgggttccaccatcattaattattttttattttt 11828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 30153240 - 30153337
Alignment:
Q  232 accatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||| || || |||||||||  |||  | ||||||||||||||||||| |||||| || |||    ||||||||||||||||| ||||    
T  30153240 accatcattaattattttatatttttttcaattttttttttgtctttatctctccaaatggaagaa-tgaagatgatcataaatggagaggatcttaac 30153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 36726332 - 36726390
Alignment:
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcct 327  Q
    |||| |||||||||||||||||  |||||||||||| ||  |||||||||||| |||||    
T  36726332 atgtatctttatctctccaaataaaagaaatggagagactgataaatggagagaatcct 36726390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 47271205 - 47271263
Alignment:
Q  272 tgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||||||||||||||||||| | |||||| | | ||||| |||||||| ||||    
T  47271205 tgtctttatctctccaaattgaagaattagagaaagagacaaatgaagaggatcttaac 47271263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 30102574 - 30102501
Alignment:
Q  169 ttgcaagttggagagagatagac-acaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||| | ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  30102574 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 30102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 35737193 - 35737128
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacc 234  Q
    |||||| ||||||||||||||||||||||||||  || ||||||| | || || ||||||| ||||    
T  35737193 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcactaggtgggtcccacc 35737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 676030 - 676094
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||| ||||||||||||  || ||  ||||| |||||| || ||||||||||||||||||||    
T  676030 agagataaacacaaaaaatatgtggtgattcctatcattaaatgagtctcaccatcattaattat 676094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 8608020 - 8607960
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||| ||||| ||||||| ||| |||||||||||   |||||||||||||||| ||||    
T  8608020 tgtgtctctatctttccaaatggaacaaatggagaaagttataaatggagaggatcttaac 8607960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 29844364 - 29844316
Alignment:
Q  176 ttggagagagatagacacaaaaaatagatgatgggtcctaccattaagt 224  Q
    ||||||||||||||||||| |||||||||  ||||| |||||| |||||    
T  29844364 ttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 50484505 - 50484303
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||    
T  50484505 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtc 50484406  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  50484405 ccaccgtcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattaaagaaatggagaaacacataaatggagaggatcttaa 50484306  T
Q  330 ccc 332  Q
    |||    
T  50484305 ccc 50484303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 12151886 - 12151684
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||    
T  12151886 gggtgaagatcttctccatttggcaaaataaatggagttttgccagttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtc 12151787  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||    
T  12151786 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaataaatggagaaacacataaatggggaggatcttaa 12151687  T
Q  330 ccc 332  Q
    |||    
T  12151686 ccc 12151684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 130 - 322
Target Start/End: Original strand, 50294019 - 50294211
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||    
T  50294019 gggtgaagatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatc 50294118  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagg 322  Q
      ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  50294119 ctaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatggaagaaattgagaaacacgtaaatggagagg 50294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 188 - 334
Target Start/End: Original strand, 12380924 - 12381070
Alignment:
Q  188 agacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctcca 287  Q
    |||||||||||||||||| ||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12381023  T
Q  288 aattgaagaaatggagaaacacataaatggagaggatcctaacccga 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12381024 aattgaagaaatggagaaacacataaatggagaggatcctaacccga 12381070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 188 - 334
Target Start/End: Original strand, 12384991 - 12385137
Alignment:
Q  188 agacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctcca 287  Q
    |||||||||||||||||| ||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12385090  T
Q  288 aattgaagaaatggagaaacacataaatggagaggatcctaacccga 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  12385091 aattgaagaaatggagaaacacataaatggagaggatcctaacccga 12385137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 48327110 - 48327312
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||| || ||||||||| ||||||||||    
T  48327110 gggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggtc 48327209  T
Q  230 tcaccatcattaattatatttta-cttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
     ||||||||||||||||||||||  |||||||||||||| ||||  |||||| ||||||||| |||||||| || |||||||||||||||||||||| ||    
T  48327210 -caccatcattaattatattttattttttttcaagattttatgtacctttatatctccaaatggaagaaattgataaacacataaatggagaggatctta 48327308  T
Q  329 accc 332  Q
    ||||    
T  48327309 accc 48327312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 23861907 - 23862114
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatggg---tcctaccattaagtg 225  Q
    |||||||| |||||||| |||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||    |||||||| ||||||    
T  23861907 tgggtgaatatcctctctatttagcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtggtgaatcctaccactaagtg 23862006  T
Q  226 ggtctcaccatcattaattatattttactttt-ttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | || |||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||    
T  23862007 gatcccaccatcattaattatattttattttttttcaagattttatgtgtctttatctttccaaattgaagaaatagagaaacacatgaatgaagaggat 23862106  T
Q  325 cctaaccc 332  Q
     |||||||    
T  23862107 tctaaccc 23862114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 45978124 - 45977939
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||                    
T  45978124 gggtgaagatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc---------------- 45978041  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     || |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45978040 -cagcatcgttaattatattttatttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 45977942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 134 - 332
Target Start/End: Complemental strand, 40328390 - 40328193
Alignment:
Q  134 gaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcac 233  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||||||||  |||||||||||| |||||| ||||||| |||| |||||||||  |||    
T  40328390 gaagatcctctccatttggcaaaataaatggagttttgcaaattggagaga--tagacacaaaaa-tagatggtgggtcccaccactaagtgggttccac 40328294  T
Q  234 catcattaattatattttactttttt-caagatttaatgtgtcttt-atctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacc 331  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||| |||||    
T  40328293 catcattagttatattttactttttttcaagattttatgtgtcttttatctctccaaattaaagaaatgaagaaacacataaatgaagaggatcttaacc 40328194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 130 - 324
Target Start/End: Original strand, 18976260 - 18976452
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggt 228  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | || ||||||||||||| ||||| ||||||||| ||||  ||||| | ||||||||||||| | ||||||| ||||  |||||||||||||||||    
T  18976360 cccatcatcattaattat-ttttatttttttcaaaattt--tgtgtttatatctctccaaatggtagaaatgaagaaggacataaatggagaggat 18976452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 7841767 - 7841868
Alignment:
Q  231 caccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  7841767 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacatataaatggagagaatcctaac 7841866  T
Q  331 cc 332  Q
    ||    
T  7841867 cc 7841868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 7840634 - 7840739
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||| | ||||||| | ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  7840634 tgggtgaagatcctattcatttggcagaataaatggagttttgtaagttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggt 7840733  T
Q  229 ctcacc 234  Q
    | ||||    
T  7840734 cccacc 7840739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 12380833 - 12380907
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagat 204  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12380833 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 12384900 - 12384974
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagat 204  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12384900 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 2845289 - 2845189
Alignment:
Q  226 ggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattga-agaaatggagaaacacataaatggagaggat 324  Q
    |||| |||||||||||||||||||||||| ||||||| ||||  ||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  2845289 ggtcccaccatcattaattatattttactattttcaaaattttgtgtgtatttatctctccaaattgatagaaatagagaaaaacataaatggagaggat 2845190  T
Q  325 c 325  Q
    |    
T  2845189 c 2845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 32361264 - 32361377
Alignment:
Q  131 ggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtct 230  Q
    |||||| |||||||||||||||| |||||| | |||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||| | ||||| ||||     
T  32361264 ggtgaaaatcctctccatttggtgaaataattagagttttgtaagttggagagagatggacacaaaagatagatggtggatcctactactaagtaggtcc 32361363  T
Q  231 caccatcattaatt 244  Q
    || |||||||||||    
T  32361364 catcatcattaatt 32361377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 46608410 - 46608523
Alignment:
Q  207 tgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaa 306  Q
    |||||||||||| |||||||| | |||||||||||||||| ||||||||||||||| | ||  ||||||||||| ||||||||| ||||||||||||       
T  46608410 tgggtcctaccactaagtgggacccaccatcattaattattttttacttttttcaaaactt--tgtgtctttatttctccaaatggaagaaatggag--- 46608504  T
Q  307 cacataaatggagaggatc 325  Q
     ||||||||||||||||||    
T  46608505 gacataaatggagaggatc 46608523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 5047377 - 5047536
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaa 269  Q
    ||||| |||||||||||| ||  || ||||||||| |||| |||||||| || ||||||| |||||||||||||||| || || |||||||||  |||      
T  5047377 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattattttata-ttttttcaaacttttt 5047475  T
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  5047476 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 5047536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 24977310 - 24977187
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttta-cttttttcaagatttaatgtgtctt 277  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||  ||| ||||||| ||||||||||  |||||||||||||| || ||| ||    
T  24977310 gagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttatattttattttttttcaagattttat-tgtatt 24977212  T
Q  278 tatctctccaaattgaagaaatgga 302  Q
    |||||||| ||||  ||||||||||    
T  24977211 tatctctctaaatgtaagaaatgga 24977187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 39426317 - 39426201
Alignment:
Q  142 tctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||||||| |||||||||| ||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||| |||||| ||| |||||||    
T  39426317 tctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcatta 39426218  T
Q  242 attatattttacttttt 258  Q
    ||||| |||||||||||    
T  39426217 attattttttacttttt 39426201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 52280034 - 52280123
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||| ||||||||  || ||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  52280034 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttacttttt 52280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 30077639 - 30077728
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||||||||||||||||  || ||||| ||| || |||||| ||| ||| |||||||||||| |||||||||||    
T  30077639 ttgcaatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattattttttacttttt 30077728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 32887785 - 32887910
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtcttt 278  Q
    |||| ||||||||||| |||||| ||  ||| |||||||||||| |||||| |||||||||||||||| ||  | |||||||||  |||  || |||| |    
T  32887785 gagaaagatagacacataaaataaatagtggatcctaccattaaatgggtcccaccatcattaattattttcaatttttttcaaacttttttgagtctat 32887884  T
Q  279 atctctccaaattgaagaaatggaga 304  Q
    ||||||||||||  ||||||||||||    
T  32887885 atctctccaaatgaaagaaatggaga 32887910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 40988723 - 40988643
Alignment:
Q  241 aattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    |||||| ||||||||||||||| ||||  ||||||||||||||||||||| ||| |||||||||||   ||||||||||||    
T  40988723 aattattttttacttttttcaaaattttgtgtgtctttatctctccaaatagaaaaaatggagaaagttataaatggagag 40988643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 24413291 - 24413354
Alignment:
Q  183 gagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||||||||||||||| |||| ||||||||| |||||| |||||| ||||||||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattat 24413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 26372321 - 26372243
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||||||  ||||||||  || | ||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  26372321 agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccaccattaattattttttacttttt 26372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 330
Target Start/End: Complemental strand, 44483822 - 44483687
Alignment:
Q  194 aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt-caagatttaatgtgtctttatctctccaaattg 292  Q
    |||||| ||||  |||||||||||||||| ||| |  |||||||||||||||| ||||| |||||| ||| |||   ||||||||||||||| |||||      
T  44483822 aaaaaaaagattgtgggtcctaccattaaatggattccaccatcattaattattttttattttttttcaaaattg--tgtgtctttatctcttcaaatgc 44483725  T
Q  293 aagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||||||   ||||||||| || |||||||||    
T  44483724 aagaaatggagaaggtcataaatggggaagatcctaac 44483687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 1228496 - 1228563
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa 197  Q
    |||| |||||||||| |||||  |||||||||| ||||||||||| ||||||||||| ||||||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacacaaaa 1228563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 324
Target Start/End: Complemental strand, 23916129 - 23916013
Alignment:
Q  206 atgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaa 305  Q
    |||| |||||||| || ||||||| |||||||||||||||| ||  |||||||||||  |||  ||||| ||||| |||||||||  || ||||||||||    
T  23916129 atggctcctaccactacgtgggtcccaccatcattaattattttaaacttttttcaaatttt--tgtgtttttatatctccaaatgaaataaatggagaa 23916032  T
Q  306 acacataaatggagaggat 324  Q
    | | | |||||||||||||    
T  23916031 aaatacaaatggagaggat 23916013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 26860056 - 26860134
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||||||| |||||||||  | ||||||| || ||||||| || ||| |||||||||||| |||||||||||    
T  26860056 agagagatagacacataaaatagatagtaggtcctatcactaagtggatcccacaatcattaattattttttacttttt 26860134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 30210665 - 30210866
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||| |||||| ||| |||||||||||| |||| ||||||  ||  || |||||||||||||| ||||||| |||| || ||| ||  |||  ||||||    
T  30210665 tgggttaagatcttcttcatttggtaaaacaaatggagttta-cagtttagagagagatagacaaaaaaaattgatggtgagtcatattattttgtgggt 30210763  T
Q  229 ctcaccatcattaattatattttacttttt-tcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcct 327  Q
    | || |||||||||  || || ||  |||| |  || |||  |||||||||||||||| |||| ||| |||||||| |  ||||||||||||||||||||    
T  30210764 cccatcatcattaacgattttatatattttcttcagtttttttgtgtctttatctctctaaatagaataaatggaggacaacataaatggagaggatcct 30210863  T
Q  328 aac 330  Q
    |||    
T  30210864 aac 30210866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 45970861 - 45970805
Alignment:
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaat 290  Q
    ||||||||||||| ||||||||||||||| ||||  ||||||||||||||| |||||    
T  45970861 catcattaattattttttacttttttcaaaattttgtgtgtctttatctcttcaaat 45970805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 26768937 - 26768886
Alignment:
Q  207 tgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||| ||| ||||||||| |||||||||||||||||||| |||||||||||    
T  26768937 tgggttctatcattaagtgagtctcaccatcattaattattttttacttttt 26768886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 35977930 - 35977883
Alignment:
Q  285 ccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||||    
T  35977930 ccaaattaaagaaatgaataaacacataaatggagaggatcctaaccc 35977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 130 - 259
Target Start/End: Complemental strand, 32618918 - 32618791
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||| ||||||| | ||||||| |||| |  ||| |||||||||||| |||| | ||| |||||  ||| |||||| ||||||| ||||    
T  32618918 gggtaaagatcctcttcatttggcataataaatggagtatc-caatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtc 32618821  T
Q  230 tcaccatcattaattatattttactttttt 259  Q
     |||||||||||||||  ||||| ||||||    
T  32618820 ccaccatcattaattactttttagtttttt 32618791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 46045767 - 46045678
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    |||||| ||||||||||||  ||| ||||||||  ||||| |||||| || ||||||  || |||||||||||||||| ||| |||||||    
T  46045767 ttgcaacttggagagagatgaacaaaaaaaataagtgatgagtcctatcactaagtgtatcccaccatcattaattatttttcacttttt 46045678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 1609622 - 1609694
Alignment:
Q  258 ttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||| ||||||||||| ||||| ||||  |||||||||  ||| ||||||||| |||||||| ||||    
T  1609622 ttcaagattttatgtgtctttacctctctaaatgaaagaaatgggaaaagacataaatgaagaggatcttaac 1609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 330
Target Start/End: Original strand, 5803804 - 5803916
Alignment:
Q  218 attaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgg 317  Q
    ||||| ||||||||||| ||||||||||| || || |||||| ||||| |  |||||||||||||| | |||| ||  ||||||||| |   |||||| |    
T  5803804 attaaatgggtctcaccttcattaattattttatatttttttaaagatattttgtgtctttatctcactaaatagagaaaatggagagaattataaattg 5803903  T
Q  318 agaggatcctaac 330  Q
    |||| ||||||||    
T  5803904 agagaatcctaac 5803916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 7845043 - 7844939
Alignment:
Q  194 aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattga 293  Q
    |||||||||||  ||| |||||||| |||||| ||| |||||| ||||||||  || ||||||||||||  ||   ||| ||||||||||| ||||| ||    
T  7845043 aaaaaatagatattggatcctaccactaagtgtgtcccaccattattaattagtttatacttttttcaaacttctttgtatctttatctcttcaaatgga 7844944  T
Q  294 agaaa 298  Q
    |||||    
T  7844943 agaaa 7844939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 30860726 - 30860794
Alignment:
Q  131 ggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaa 199  Q
    |||||||||| ||  ||||| | ||||| ||| ||||||||||||||||||||| ||||||| ||||||    
T  30860726 ggtgaagatcttcatcatttagcaaaatgaatggagttttgcaagttggagagatatagacataaaaaa 30860794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 680106 - 680169
Alignment:
Q  270 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacccg 333  Q
    ||||||||||||||||||||| ||  |||| || |||   ||||||||||||||||||||||||    
T  680106 tgtgtctttatctctccaaatagagtaaattgataaagttataaatggagaggatcctaacccg 680169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 6948825 - 6948899
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaataga--tgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| ||||||||||||||||| |||||||| |  || ||||||||| || ||||||| || |||||||||||    
T  6948825 ttgcaatttggagagagatagacaaaaaaaatataagtggtgggtcctatcactaagtggatcccaccatcatta 6948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 7783217 - 7783288
Alignment:
Q  211 tcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatct 282  Q
    ||||| |||||||||| |  |||||||||||||||||||||| ||||||  | |||| | ||||||||||||    
T  7783217 tcctatcattaagtggattgcaccatcattaattatattttaattttttttaaattttacgtgtctttatct 7783288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 32361374 - 32361417
Alignment:
Q  288 aattgaagaaatggagaaacacataaatggagaggatcctaacc 331  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  32361374 aattgaagaaatggagaaatgtataaatggagaggatcctaacc 32361417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 6816364 - 6816294
Alignment:
Q  254 ttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    |||||||||||||| |||||| ||||| ||  |||||  ||||||| |||||| ||||||||| |||||||    
T  6816364 ttttttcaagatttcatgtgtttttatatcctcaaataaaagaaattgagaaagacataaatgaagaggat 6816294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 18107316 - 18107389
Alignment:
Q  169 ttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||||| ||||||||  || ||||||||| || ||| ||| || |||||||||||    
T  18107316 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaaatggatcccaccatcatta 18107389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 49384719 - 49384809
Alignment:
Q  233 ccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||||||||  || |||||||||||||||||  |||||| ||||||||  |||| || |||||||||| |   |||||| |||||||||    
T  49384719 ccatcattaattactttatacttttttcaagattt--tgtgtccttatctctttaaatggaggaaatggagagaattataaatagagaggatc 49384809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 1228593 - 1228678
Alignment:
Q  237 cattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    |||||||||| ||||||||||||||| | ||  ||||||| ||||| | ||||  | ||||||||||||  || ||||||||||||||    
T  1228593 cattaattattttttacttttttcaaaactt--tgtgtctatatctattcaaagggtagaaatggagaagaacgtaaatggagaggat 1228678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 19910603 - 19910474
Alignment:
Q  197 aaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttta-cttttttcaagatttaatgtgtctttatctctcca-----aat 290  Q
    |||||||| ||| || ||| || || |||||||  ||||| |||||||||||||||  ||||||||| |||| |||||  ||||||||||||     |||    
T  19910603 aaatagattatgagttctatcactaggtgggtcataccattattaattatattttattttttttcaaaattttatgtg--tttatctctccaaatggaat 19910506  T
Q  291 tgaagaaatggagaaacacataaatggagagg 322  Q
     |||||||| |||||| ||||||||| |||||    
T  19910505 ggaagaaatagagaaagacataaatgaagagg 19910474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 49943989 - 49944041
Alignment:
Q  194 aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||||||||||||||||||  ||||| || |||  |||||||||||||||    
T  49943989 aaaaaatagatgatgggtcctattattaaatgagtcctaccatcattaattat 49944041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 7e-81; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 129 - 333
Target Start/End: Complemental strand, 2230103 - 2229899
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  2230103 tgggtgaacatcctctccatttggcaaaataattggagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtt 2230004  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
      |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  2230003 tccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattaaagaaatagagaaacacataaatgaagaggatccta 2229904  T
Q  329 acccg 333  Q
    |||||    
T  2229903 acccg 2229899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 129 - 333
Target Start/End: Original strand, 43719902 - 43720106
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||    
T  43719902 tgggtgaagatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggt 43720001  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    | |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43720002 cccaccatcattaattatattttattttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaagatccta 43720101  T
Q  329 acccg 333  Q
    |||||    
T  43720102 acccg 43720106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 128 - 330
Target Start/End: Complemental strand, 34373952 - 34373750
Alignment:
Q  128 ctgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtggg 227  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | ||    
T  34373952 ctgggtgaagattctctccatttggcaaaataaattgtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaattagg 34373853  T
Q  228 tctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcct 327  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||    
T  34373852 tcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaaaaatgaagaaacacattgatggagaggatcct 34373753  T
Q  328 aac 330  Q
    |||    
T  34373752 aac 34373750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 19830386 - 19830591
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||    
T  19830386 tgggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggt 19830485  T
Q  229 ctcaccatcattaattatatttta-cttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacat-aaatggagaggatcc 326  Q
    | |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||     
T  19830486 cccaccatcattaattatattttaccttttttaaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacacataaaatggagaggatct 19830585  T
Q  327 taaccc 332  Q
    ||||||    
T  19830586 taaccc 19830591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 129 - 309
Target Start/End: Complemental strand, 27033771 - 27033591
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |    
T  27033771 tgggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggat 27033672  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacac 309  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27033671 cccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 27033591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 40851891 - 40851690
Alignment:
Q  132 gtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctc 231  Q
    |||||||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||| | |||| ||||||||||      
T  40851891 gtgaagatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcct 40851792  T
Q  232 accatcattaatt-atattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40851791 accatcattaaatcatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaatacataaatggagaggatcctaac 40851692  T
Q  331 cc 332  Q
    ||    
T  40851691 cc 40851690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 148 - 320
Target Start/End: Original strand, 34373559 - 34373731
Alignment:
Q  148 tttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattata 247  Q
    ||||| ||||||||| ||||||||||||||  | |||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  34373559 tttggcaaaataaatagagttttgcaagttccatagagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 34373658  T
Q  248 ttttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34373659 ttttacttttttcaagattttttgtctctttatctctccaaattgaagaaatggagaaacacataaatggaga 34373731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 133 - 320
Target Start/End: Complemental strand, 46167509 - 46167322
Alignment:
Q  133 tgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctca 232  Q
    |||| ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||  |    
T  46167509 tgaacatcctctccatttagcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatccta 46167410  T
Q  233 ccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
    |||| |||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  46167409 ccattattaattatattttacttttttcaagattatatttgtctttatctctctaaattgaagaaatggaaaaacacataaatggaga 46167322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 130 - 324
Target Start/End: Complemental strand, 48084939 - 48084744
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggt 228  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | || ||||||||||||| ||||| ||||||||| ||||  ||||||| ||||||||||||| | ||||||||||||  |||||||||||||||||    
T  48084839 cccatcatcattaattattttttatttttttcaaaattttgtgtgtctatatctctccaaatggtagaaatggagaaggacataaatggagaggat 48084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 147 - 330
Target Start/End: Original strand, 550790 - 550972
Alignment:
Q  147 atttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||| ||||||||| |||||| |||| ||||||| ||||| | |||||||||||||| ||| ||||| ||||||||||||| |||||| |||| ||||    
T  550790 atttggcaaaataaatggagttt-gcaatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttat 550888  T
Q  247 attttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||| || |||| |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  550889 attttacttttttaaaaattttatgtatctttatctctccaaatggaagaaatggagaaagacataaatggagaggatcttaac 550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 154 - 332
Target Start/End: Complemental strand, 12403061 - 12402883
Alignment:
Q  154 aaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttac 253  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||| |||||| ||| | |||||| |||||| ||| |||||| ||||||||||||||||    
T  12403061 aaaataaatagagttttgcaagttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccaccattattaattatattttac 12402962  T
Q  254 tt-ttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    || |||| ||||||| ||||||||||||||||||||||| |  ||||| ||||||||||||||||||| |||||||||||    
T  12402961 ttttttttaagattttatgtgtctttatctctccaaattaagaaaatgaagaaacacataaatggaga-gatcctaaccc 12402883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 24754776 - 24754677
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |  ||||||||| ||||||||||    
T  24754776 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtc 24754677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 24763773 - 24763674
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |  ||||||||| ||||||||||    
T  24763773 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtc 24763674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 566746 - 566898
Alignment:
Q  146 catttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaa-tagatgatgggtcctaccattaagtgggtctcaccatcattaatt 244  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||| |||||||| || |||  || ||||| ||||||||||||| |||| | |||| ||    
T  566746 catttggcaaaataaatggagttt-gcaatttggagagagatagatacaaaaaaatatatggcggatcctatcattaagtgggtcccacctttattattt 566844  T
Q  245 atattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaat 299  Q
    ||||||||| ||||||||||||| |||| | ||||||||||||||| ||||||||    
T  566845 atattttac-tttttcaagattttatgtatttttatctctccaaatggaagaaat 566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 31523663 - 31523808
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||||||||||||||||||||||||  || |||||||||  | |||||||||| |||||||||||||||| |||||||||||              
T  31523663 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttacttttt---------- 31523752  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| |||| ||| |||||||||||   |||||||||||||||    
T  31523753 atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 31523808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 42613160 - 42613015
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||| ||||||||||||| ||||||||  || ||||||||| || |||||||||| |||||||||||||||| |||||||||||              
T  42613160 ttgcaatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt---------- 42613071  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| |||| ||| |||||||||||   |||||||||||||||    
T  42613070 atgtgtctttatctctctaaatagaacaaatggagaaatttataaatggagaggat 42613015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 330
Target Start/End: Complemental strand, 29586454 - 29586256
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||||||| ||||| | | ||||||| |||| | |||  ||||||||||||||||||| |||||||||  |  ||| ||| ||||||||||||    
T  29586454 gggtaaagatcctcttcatttagcataataaatggagtat-gcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtc 29586356  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
    ||||||||||||||||  |||||  |||||| |  |||  |||||||||||||||| |||| || |||||||||| |   ||||||||||| |||| |||    
T  29586355 tcaccatcattaattacttttta-gtttttcgaatttttttgtgtctttatctctctaaatggatgaaatggagagaataataaatggagatgatcttaa 29586257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 49679265 - 49679410
Alignment:
Q  169 ttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagattta 268  Q
    |||||| ||||||||||||||||||||||||||  ||  |||||||| || ||| |||||| |||||||||||||||| |||||||||||              
T  49679265 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt---------- 49679354  T
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||||||||||||| ||||  || |||||||||||   |||||||||||||||    
T  49679355 atgtgtctttatctctctaaatgaaacaaatggagaaatttataaatggagaggat 49679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 1995513 - 1995435
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttt 258  Q
    ||||||||||||| | ||||||||| ||| ||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  1995513 agagagatagacatagaaaatagataatgagtcctaccaataagtgagtctcaccatcattaattattttttacttttt 1995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 40810357 - 40810505
Alignment:
Q  176 ttggagagagatagacacaaaa-aatagatgatgggtcctaccattaagtgggtctcaccatcattaattatatttta-cttttttcaagatttaatgtg 273  Q
    ||||||||||||| ||| |||| |||||||| ||||||  |||| |||||||||| || ||||||||||||| |||||  ||||||||| ||||  ||||    
T  40810357 ttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatcattaattattttttattttttttcaaaattt--tgtg 40810454  T
Q  274 tctttatctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    | | ||||||||| |||   ||||||||| ||| |||||||||||||||||    
T  40810455 tttatatctctcctaatgatagaaatggaaaaagacataaatggagaggat 40810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 52859441 - 52859528
Alignment:
Q  235 atcattaattatattttact-tttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagag 321  Q
    |||||||||||||||||||| ||||| ||||||| |||||| ||||| ||||||||| | ||||||||||||| ||||||||| ||||    
T  52859441 atcattaattatattttactcttttttaagattttatgtgtatttatttctccaaatggtagaaatggagaaagacataaatgaagag 52859528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 137 - 330
Target Start/End: Original strand, 10474402 - 10474594
Alignment:
Q  137 gatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccat 236  Q
    ||||||||| |||||  | ||||||| |||| | |||| || |||||| ||||||||| ||||||||| |||| |||||| |||||||| ||  |||||     
T  10474402 gatcctctctatttgacataataaatggagtat-gcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccaccaa 10474500  T
Q  237 cattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    |||||||||  ||||| |||||| ||  |||  ||||||| |||||||||||||  | |||||||||| |   |||||||||||| ||| ||||    
T  10474501 cattaattactttttagttttttgaaatttttgtgtgtctatatctctccaaatatatgaaatggagagaataataaatggagagaatcttaac 10474594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 28229365 - 28229472
Alignment:
Q  136 agatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacca 235  Q
    |||||||||||||||  |||||||||| |||| | |||| | ||| ||| ||||||||||||||||| || || |||||| |||||| || |||||||||    
T  28229365 agatcctctccatttattaaaataaatggagtgt-gcaattaggaaagatatagacacaaaaaataggtggtgagtcctatcattaaatgagtctcacca 28229463  T
Q  236 tcattaatt 244  Q
    |||||||||    
T  28229464 tcattaatt 28229472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 33632940 - 33632747
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    |||| |||||| ||||||||||||| ||||||| |||  | |||| ||||||||||||||||||| |||||||||  ||| |||||| ||||| ||| |     
T  33632940 gggtaaagatcttctccatttggtataataaatggagcat-gcaatttggagagagatagacacataaaatagatagtggatcctactattaaatggat- 33632843  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    ||  ||||||||||||  ||||| |||||  |   |||  ||||| | ||||||||||||| || |||||||||| |   ||||||||||||||||    
T  33632842 tccacatcattaattactttttagtttttcgatttttttttgtgtttatatctctccaaatggatgaaatggagagaataataaatggagaggatc 33632747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 24647958 - 24647905
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggaga 182  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  24647958 tgggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggaga 24647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 25285843 - 25285966
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtcttta 279  Q
    ||||||||||||||| |||||||||  ||| ||||| |||||| || | | ||||||||| |||| | ||| ||||||||  ||||||  ||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaattttttttgactttttt-tagattt-ttgtgttttta 25285940  T
Q  280 tctctccaaattgaagaaatggagaa 305  Q
    ||||| ||||| ||||||||||||||    
T  25285941 tctctacaaatggaagaaatggagaa 25285966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 32577526 - 32577451
Alignment:
Q  254 ttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 330  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||||||     |||||||| |||||||||||    
T  32577526 ttttttcaagatttt-tgtgtctttatctctccaaatagaagaaatggagaagagtttaaatggaaaggatcctaac 32577451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 3009264 - 3009173
Alignment:
Q  224 tgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagga 323  Q
    |||||| |||||||||||||||| |||||||||||          ||||||||||||||||| |||| ||| |||||||||||   ||||||||||||||    
T  3009264 tgggtcccaccatcattaattattttttacttttt----------atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagagga 3009175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 25506612 - 25506650
Alignment:
Q  291 tgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25506612 tgaagaaatggagaaacatataaatggagaggatcctaa 25506650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 2310324 - 2310235
Alignment:
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    ||||||||||||| ||||||||| || || ||||  |||||||||||||||| |||| ||||||||  | || ||| |||||||||| ||||    
T  2310324 catcattaattattttttactttctttaaaattt--tgtgtctttatctctctaaatggaagaaataaataagcacgtaaatggagatgatc 2310235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 36354323 - 36354414
Alignment:
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||||||||  | |||| ||||||||||||  ||||||||||||| || ||||||| ||||| |||| |    |||||||||||||||    
T  36354323 catcattaattattgtatactattttcaagattttttgtgtctttatctttctaaattgaggaaattgagagaattgtaaatggagaggatc 36354414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 54911723 - 54911644
Alignment:
Q  180 agagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt 259  Q
    ||||||||||| ||| ||||||| |  |||||||||||||||| || ||  |||||||||||||||  ||||||| ||||    
T  54911723 agagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaattaatttttactgtttt 54911644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 40809539 - 40809581
Alignment:
Q  141 ctctccatttggtaaaataaattgagttttgcaagttggagag 183  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||    
T  40809539 ctctccatttgctaaaataaattgagttttacaatttggagag 40809581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 48950671 - 48950613
Alignment:
Q  188 agacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    ||||||| ||||||| || ||| ||||| |||||| || ||||||||||||||||||||    
T  48950671 agacacataaaataggtggtggatcctatcattaaatgagtctcaccatcattaattat 48950613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 3009339 - 3009252
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccat 219  Q
    |||| ||||||||||||||||   ||||||||| ||  || |||| ||||||||||||||||| ||||||||  |||||||||| |||||    
T  3009339 gggtaaagatcctctccatttataaaaataaatggaagtt-gcaatttggagagagatagaca-aaaaaataagtgatgggtcccaccat 3009252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 20485808 - 20485869
Alignment:
Q  264 atttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||| |||||| | ||||||||||||| | ||||||||||||| |  |||||||||||||||    
T  20485808 attttatgtgtttatatctctccaaatggtagaaatggagaaaaatttaaatggagaggatc 20485869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 31996845 - 31996801
Alignment:
Q  276 tttatctctccaaattgaagaaatggagaaacacataaatggaga 320  Q
    ||||||||||||||| ||||||||||||| ||  |||||||||||    
T  31996845 tttatctctccaaatagaagaaatggagacactaataaatggaga 31996801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 33980001 - 33979937
Alignment:
Q  182 agagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattat 246  Q
    |||||||||||||||||||| ||| ||  ||||| |||||| |  ||||||| ||||||||||||    
T  33980001 agagatagacacaaaaaataaatggtgaatcctatcattaaataagtctcactatcattaattat 33979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 49289046 - 49289102
Alignment:
Q  269 atgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||||||||||| |||||||||  || ||||||||||| ||||||||| ||| ||||    
T  49289046 atgtgtctttatttctccaaatgaaacaaatggagaaaaacataaatgaagatgatc 49289102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 7270 - 7064
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaatt----gagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtg 225  Q
    ||||||||||||||||||||||| |||||||||     |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  7270 gggtgaagatcctctccatttggcaaaataaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctactattaagtg 7171  T
Q  226 ggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
    |||  |||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  7170 ggttccaccatcattaattatattttatttttttcaagattttatatgtctttatctctgcaaattgaagaaatgaagaaacacataaatggagaggatc 7071  T
Q  326 ctaaccc 332  Q
    |||||||    
T  7070 ctaaccc 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 16353 - 16555
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtc 229  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  16353 gggtgaagatcctctccgttaggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtc 16452  T
Q  230 tcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaa 329  Q
     || ||||||||||||||||||| |||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16453 ccatcatcattaattatattttatttttttcaagattttatgtaattttatctctccaaattgaagaaatggagaaacacataaattgagaggatcctaa 16552  T
Q  330 ccc 332  Q
    |||    
T  16553 ccc 16555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 9156 - 9349
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    |||||||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||| ||||||| |    
T  9156 tgggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggat 9255  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
      |||||||||||||||||||    |||||| ||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  9256 tccaccatcattaattatatt---atttttttaagatttcatgtgcctttatctctccaaatggaagaaattgagaaacacataaatggagaggatc 9349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 135 - 332
Target Start/End: Original strand, 6396 - 6585
Alignment:
Q  135 aagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcacc 234  Q
    ||||||||||| |||| ||||||||||| |  |||||||||||||| ||||| |||||||||||||||||| |||||||||| | ||| |||||   |||    
T  6396 aagatcctctctatttcgtaaaataaatgggattttgcaagttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggtacaacc 6495  T
Q  235 atcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||    
T  6496 atcattaattatattttactttttccaagattttatgtgtctttatctctcaaaattga--------agaaacacataaatggagaggatcctaaccc 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 134 - 332
Target Start/End: Original strand, 73817 - 73998
Alignment:
Q  134 gaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcac 233  Q
    |||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||| ||||| ||||||| |||||||                 ||     
T  73817 gaagatcctctctatttggcaaaataaatggtgttttgcaagttggagagagatagacgcaaaatatagatggtgggtcc-----------------cat 73899  T
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 332  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  73900 catcattaattatattttatttttttcaagattttatgtgtttttatctctctaaattgaagaaatggagaaacacataaatggagagcatcctgaccc 73998  T

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Target: scaffold0126 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 22398 - 22593
Alignment:
Q  129 tgggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggt 228  Q
    ||||| |||||||||| ||||| | ||||||||| |||||| |||| ||  | |||||||||||||||||||||||  ||| |||||||| |||||| ||    
T  22398 tgggttaagatcctctgcatttagcaaaataaatggagttt-gcaatttacaaagagatagacacaaaaaatagatagtggatcctaccactaagtgagt 22496  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatc 325  Q
      ||| || |||||||||||||||||||||||||||||| |||||| |||||||||| ||||  |||||||||||| | ||||||||||||| ||||    
T  22497 tccacaataattaattatattttacttttttcaagattttatgtgtatttatctctctaaatgtaagaaatggagatagacataaatggagaagatc 22593  T

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Target: scaffold0456 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 13799 - 13641
Alignment:
Q  130 gggtgaagatcctctccatttggtaaaataaattgagttttgcaagttggagagagatagacacaaaaaa-tagatgatgggtcctaccattaagtgggt 228  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||| |||||| |||||||                   
T  13799 gggtgaagatcttctccatttggcaaaataaatagagttttgctagttggagagagatagacaaaaaaaaatagatggtgggtcc--------------- 13715  T
Q  229 ctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggaga 304  Q
      ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13714 --caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaga 13641  T

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Target: scaffold0171 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 179 - 324
Target Start/End: Original strand, 17311 - 17446
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtcttt 278  Q
    |||||||||||||||||||||||  || ||||||||| || |||||||||| |||||||||||||||| |||||||||||          ||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt----------atgtgtcttt 17400  T
Q  279 atctctccaaattgaagaaatggagaaacacataaatggagaggat 324  Q
    ||||||| |||| ||| ||||| |||||   |||||||||||||||    
T  17401 atctctctaaatggaacaaatgaagaaatttataaatggagaggat 17446  T

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Target: scaffold0468 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 328
Target Start/End: Complemental strand, 5625 - 5531
Alignment:
Q  234 catcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatccta 328  Q
    ||||||||||||| || ||||||||||||  ||   | ||||||||||||||||||| ||||||||| |||    ||||||||||||||||||||    
T  5625 catcattaattattttatacttttttcaaacttctttatgtctttatctctccaaatggaagaaatgaagaggatcataaatggagaggatccta 5531  T

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Target: scaffold0121 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 29574 - 29654
Alignment:
Q  179 gagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaattatattttactttttt 259  Q
    |||||||||||| ||| ||||||| | || ||||||| ||||| ||| ||| ||| ||||||||||| |||||||||||||    
T  29574 gagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaattacattttactttttt 29654  T

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Target: scaffold0062 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 58759 - 58684
Alignment:
Q  170 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccattaagtgggtctcaccatcattaatta 245  Q
    ||||| ||||||||||||| ||| | |||||||||  ||| ||||||||||||||||||  || ||||||||||||    
T  58759 tgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

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Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 4695 - 4768
Alignment:
Q  169 ttgcaagttggagagagatagacac-aaaaaatagatgatgggtcctaccattaagtgggtctcaccatcatta 241  Q
    |||||| |||||||||||||||||| ||||||||  || ||||||||| || ||||||| || |||||||||||    
T  4695 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 4768  T

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Target: scaffold0252 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 330
Target Start/End: Original strand, 10518 - 10630
Alignment:
Q  218 attaagtgggtctcaccatcattaattatattttacttttttcaagatttaatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgg 317  Q
    ||||| ||| |||||||||||||||| |  || ||||||||| |||||||  ||| | ||||||||| |||||  |||||||||||| |  | |||||||    
T  10518 attaaatggatctcaccatcattaataactttatactttttttaagattttttgtatttttatctctacaaatgaaagaaatggagacaatcgtaaatgg 10617  T
Q  318 agaggatcctaac 330  Q
    || ||||| ||||    
T  10618 agtggatcttaac 10630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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