View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8985_low_35 (Length: 374)

Name: NF8985_low_35
Description: NF8985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8985_low_35
NF8985_low_35
[»] chr5 (46 HSPs)
chr5 (7-356)||(36796497-36796848)
chr5 (222-345)||(9202754-9202877)
chr5 (136-248)||(14331405-14331517)
chr5 (135-324)||(41534404-41534590)
chr5 (44-106)||(36796934-36796996)
chr5 (136-315)||(34736446-34736626)
chr5 (138-186)||(14706205-14706253)
chr5 (142-189)||(4855793-4855840)
chr5 (179-345)||(7674589-7674756)
chr5 (136-202)||(26004916-26004982)
chr5 (145-194)||(444015-444064)
chr5 (152-189)||(4855869-4855906)
chr5 (226-323)||(12425534-12425631)
chr5 (136-323)||(16937802-16937990)
chr5 (136-189)||(17369301-17369354)
chr5 (136-189)||(32194011-32194064)
chr5 (136-247)||(499650-499762)
chr5 (222-342)||(4014430-4014550)
chr5 (152-208)||(7907961-7908017)
chr5 (136-192)||(11153365-11153421)
chr5 (222-342)||(39105408-39105528)
chr5 (134-189)||(5377114-5377169)
chr5 (226-313)||(7319379-7319466)
chr5 (131-194)||(40335787-40335850)
chr5 (271-342)||(40452235-40452306)
chr5 (206-292)||(6587097-6587183)
chr5 (143-189)||(16016352-16016398)
chr5 (258-342)||(34117578-34117659)
chr5 (132-174)||(39594920-39594962)
chr5 (136-189)||(11297115-11297168)
chr5 (144-189)||(11457196-11457241)
chr5 (223-268)||(12857345-12857390)
chr5 (137-186)||(13508541-13508590)
chr5 (141-182)||(19138634-19138675)
chr5 (133-178)||(28578954-28578999)
chr5 (222-290)||(7984965-7985033)
chr5 (136-188)||(9174915-9174967)
chr5 (138-186)||(10771809-10771857)
chr5 (138-182)||(11615575-11615619)
chr5 (147-187)||(12407660-12407700)
chr5 (138-194)||(19177538-19177594)
chr5 (136-184)||(34198524-34198572)
chr5 (136-172)||(35299880-35299916)
chr5 (145-189)||(37968975-37969019)
chr5 (135-175)||(41419431-41419471)
chr5 (222-286)||(42583348-42583412)
[»] chr1 (45 HSPs)
chr1 (135-324)||(6292455-6292644)
chr1 (136-247)||(33723301-33723413)
chr1 (223-336)||(9656600-9656713)
chr1 (152-335)||(31517675-31517859)
chr1 (144-248)||(37593611-37593716)
chr1 (136-196)||(3597200-3597260)
chr1 (131-247)||(6932876-6932992)
chr1 (132-248)||(21002198-21002310)
chr1 (136-317)||(7217993-7218175)
chr1 (138-188)||(29793619-29793669)
chr1 (138-187)||(4757438-4757487)
chr1 (132-189)||(34536256-34536313)
chr1 (217-342)||(37842356-37842481)
chr1 (136-299)||(4622080-4622244)
chr1 (139-318)||(10199330-10199510)
chr1 (138-194)||(28467230-28467286)
chr1 (136-187)||(33976278-33976329)
chr1 (133-195)||(35017674-35017736)
chr1 (136-186)||(48748514-48748564)
chr1 (136-189)||(24460320-24460373)
chr1 (152-193)||(43420352-43420393)
chr1 (138-194)||(5157165-5157221)
chr1 (132-188)||(25944540-25944596)
chr1 (136-188)||(52013986-52014038)
chr1 (271-342)||(49517014-49517085)
chr1 (138-189)||(51929383-51929434)
chr1 (136-194)||(601133-601191)
chr1 (131-189)||(4868497-4868555)
chr1 (138-180)||(17631025-17631067)
chr1 (143-240)||(38170616-38170714)
chr1 (132-174)||(41505787-41505829)
chr1 (205-299)||(28689441-28689537)
chr1 (136-185)||(32958739-32958788)
chr1 (223-292)||(34290230-34290299)
chr1 (142-247)||(35079996-35080100)
chr1 (223-292)||(45975684-45975753)
chr1 (225-313)||(2294884-2294972)
chr1 (139-187)||(2522696-2522744)
chr1 (282-342)||(4256108-4256168)
chr1 (152-247)||(4768764-4768860)
chr1 (142-186)||(15515657-15515701)
chr1 (136-188)||(15558310-15558362)
chr1 (169-340)||(29007668-29007840)
chr1 (136-184)||(38867752-38867800)
chr1 (271-326)||(46423339-46423392)
[»] chr3 (24 HSPs)
chr3 (136-311)||(45541546-45541722)
chr3 (136-208)||(21872214-21872286)
chr3 (229-292)||(50600191-50600254)
chr3 (136-174)||(16072960-16072998)
chr3 (222-324)||(36783340-36783442)
chr3 (224-342)||(44061032-44061149)
chr3 (136-189)||(20210847-20210900)
chr3 (132-189)||(33965403-33965460)
chr3 (136-185)||(51929843-51929892)
chr3 (136-208)||(44014717-44014789)
chr3 (142-189)||(22667501-22667548)
chr3 (142-189)||(22724140-22724187)
chr3 (133-184)||(31512486-31512537)
chr3 (135-177)||(20874229-20874271)
chr3 (222-316)||(21367637-21367731)
chr3 (136-174)||(53493844-53493882)
chr3 (138-187)||(20173811-20173860)
chr3 (136-173)||(26990144-26990181)
chr3 (223-291)||(28622006-28622074)
chr3 (136-188)||(32663737-32663789)
chr3 (271-335)||(33405222-33405286)
chr3 (136-184)||(34958396-34958444)
chr3 (136-188)||(37138381-37138433)
chr3 (136-243)||(41164909-41165017)
[»] chr4 (36 HSPs)
chr4 (143-314)||(50298499-50298659)
chr4 (226-342)||(6364093-6364209)
chr4 (139-202)||(1017113-1017176)
chr4 (136-188)||(18512434-18512486)
chr4 (142-194)||(18628478-18628530)
chr4 (136-188)||(55870261-55870313)
chr4 (133-239)||(39178182-39178289)
chr4 (271-342)||(49219083-49219154)
chr4 (131-189)||(30338529-30338587)
chr4 (252-326)||(40174523-40174597)
chr4 (136-248)||(21043155-21043267)
chr4 (136-185)||(24193634-24193683)
chr4 (221-326)||(51630071-51630176)
chr4 (154-324)||(52746776-52746948)
chr4 (136-189)||(54277242-54277295)
chr4 (133-188)||(7730699-7730753)
chr4 (136-187)||(32071963-32072014)
chr4 (136-194)||(7367973-7368031)
chr4 (136-194)||(9316618-9316676)
chr4 (136-174)||(27043749-27043787)
chr4 (288-342)||(49803155-49803209)
chr4 (134-188)||(56186815-56186869)
chr4 (172-228)||(17751102-17751159)
chr4 (136-185)||(21953375-21953424)
chr4 (135-184)||(28259376-28259425)
chr4 (223-268)||(38515851-38515896)
chr4 (134-183)||(52169937-52169986)
chr4 (136-237)||(52333648-52333749)
chr4 (206-299)||(52754587-52754679)
chr4 (125-174)||(53034707-53034756)
chr4 (138-186)||(19305027-19305075)
chr4 (138-194)||(19429391-19429447)
chr4 (136-196)||(23582384-23582444)
chr4 (132-184)||(25717696-25717748)
chr4 (232-324)||(47118981-47119073)
chr4 (138-194)||(47146037-47146093)
[»] chr7 (27 HSPs)
chr7 (223-335)||(40688993-40689105)
chr7 (135-188)||(47041957-47042010)
chr7 (222-342)||(39907747-39907867)
chr7 (139-185)||(529464-529510)
chr7 (138-247)||(12234810-12234920)
chr7 (136-189)||(17942169-17942222)
chr7 (136-189)||(33894725-33894778)
chr7 (144-189)||(34754737-34754782)
chr7 (282-323)||(40428518-40428559)
chr7 (136-180)||(47046027-47046071)
chr7 (134-185)||(1418521-1418572)
chr7 (131-194)||(22387810-22387873)
chr7 (201-287)||(25130074-25130160)
chr7 (143-248)||(25670512-25670618)
chr7 (147-189)||(25907567-25907609)
chr7 (131-208)||(4970706-4970782)
chr7 (134-183)||(5276594-5276643)
chr7 (136-189)||(23214953-23215006)
chr7 (136-189)||(29363606-29363659)
chr7 (136-248)||(30535601-30535714)
chr7 (281-342)||(49060484-49060545)
chr7 (271-342)||(1432019-1432093)
chr7 (136-180)||(7244788-7244832)
chr7 (138-194)||(8427106-8427162)
chr7 (278-326)||(30180011-30180059)
chr7 (136-208)||(34035997-34036068)
chr7 (136-188)||(40598404-40598456)
[»] chr2 (35 HSPs)
chr2 (206-318)||(29316765-29316877)
chr2 (136-318)||(8017402-8017585)
chr2 (224-335)||(18066079-18066190)
chr2 (143-271)||(5902477-5902604)
chr2 (136-200)||(28810371-28810435)
chr2 (136-194)||(22878191-22878249)
chr2 (136-189)||(13866976-13867029)
chr2 (278-342)||(2416257-2416321)
chr2 (136-188)||(40759259-40759311)
chr2 (136-208)||(41170689-41170761)
chr2 (131-194)||(15370237-15370300)
chr2 (229-300)||(18179253-18179324)
chr2 (131-178)||(40837351-40837398)
chr2 (271-342)||(43199358-43199429)
chr2 (136-198)||(40944002-40944064)
chr2 (225-353)||(1939341-1939469)
chr2 (143-196)||(7043496-7043549)
chr2 (136-248)||(43529777-43529890)
chr2 (152-208)||(29430837-29430893)
chr2 (143-254)||(33192234-33192345)
chr2 (275-342)||(3423827-3423894)
chr2 (136-186)||(16551758-16551809)
chr2 (133-196)||(25609887-25609950)
chr2 (136-175)||(26143561-26143600)
chr2 (138-240)||(40158764-40158867)
chr2 (143-181)||(27288703-27288741)
chr2 (132-174)||(30331864-30331906)
chr2 (133-245)||(787373-787486)
chr2 (143-196)||(7035336-7035389)
chr2 (226-323)||(9395093-9395190)
chr2 (136-185)||(18525160-18525209)
chr2 (137-186)||(21280273-21280322)
chr2 (152-188)||(12037910-12037946)
chr2 (152-184)||(18234521-18234553)
chr2 (136-208)||(40400819-40400891)
[»] chr8 (41 HSPs)
chr8 (136-198)||(7714331-7714393)
chr8 (224-342)||(10114434-10114551)
chr8 (136-317)||(9699970-9700152)
chr8 (137-202)||(4560587-4560652)
chr8 (280-324)||(1112815-1112859)
chr8 (222-292)||(2482859-2482927)
chr8 (126-189)||(11059638-11059701)
chr8 (131-186)||(18331815-18331870)
chr8 (132-194)||(2606142-2606204)
chr8 (170-308)||(24558831-24558968)
chr8 (288-345)||(2699247-2699304)
chr8 (137-194)||(6496811-6496868)
chr8 (135-180)||(8060775-8060820)
chr8 (132-189)||(14926897-14926954)
chr8 (206-287)||(41442443-41442524)
chr8 (136-185)||(43043770-43043819)
chr8 (138-186)||(1561378-1561426)
chr8 (136-208)||(2487927-2487999)
chr8 (136-208)||(16162839-16162911)
chr8 (136-187)||(10437983-10438034)
chr8 (217-324)||(21653043-21653150)
chr8 (267-318)||(29262925-29262976)
chr8 (142-240)||(39881646-39881745)
chr8 (223-266)||(41596001-41596044)
chr8 (136-186)||(2091864-2091914)
chr8 (135-189)||(10488561-10488615)
chr8 (140-186)||(10560148-10560194)
chr8 (136-174)||(38602440-38602478)
chr8 (132-185)||(3112225-3112278)
chr8 (278-323)||(4558761-4558806)
chr8 (222-263)||(6525626-6525667)
chr8 (136-189)||(43368619-43368672)
chr8 (132-188)||(1117406-1117462)
chr8 (271-323)||(1470911-1470963)
chr8 (136-184)||(3092543-3092591)
chr8 (224-292)||(10120750-10120818)
chr8 (136-248)||(12851214-12851329)
chr8 (135-175)||(22505654-22505694)
chr8 (142-182)||(34290974-34291014)
chr8 (271-335)||(35374428-35374492)
chr8 (136-196)||(37353091-37353151)
[»] chr6 (20 HSPs)
chr6 (132-324)||(2735031-2735225)
chr6 (136-189)||(8420115-8420169)
chr6 (136-189)||(2727802-2727855)
chr6 (226-341)||(9093566-9093681)
chr6 (135-184)||(13908343-13908392)
chr6 (206-291)||(31624085-31624170)
chr6 (136-184)||(31776191-31776239)
chr6 (153-239)||(769185-769272)
chr6 (136-187)||(8010457-8010508)
chr6 (267-318)||(27693490-27693541)
chr6 (271-342)||(29274284-29274355)
chr6 (139-201)||(17241082-17241144)
chr6 (137-186)||(738461-738510)
chr6 (141-198)||(2732169-2732228)
chr6 (136-188)||(4325224-4325276)
chr6 (136-188)||(10016722-10016774)
chr6 (217-249)||(10616714-10616746)
chr6 (294-342)||(10728576-10728624)
chr6 (271-315)||(31324427-31324471)
chr6 (134-194)||(35070384-35070444)
[»] scaffold0044 (1 HSPs)
scaffold0044 (250-305)||(51984-52039)
[»] scaffold0459 (1 HSPs)
scaffold0459 (135-187)||(6646-6698)
[»] scaffold0366 (1 HSPs)
scaffold0366 (135-187)||(6644-6696)
[»] scaffold0020 (1 HSPs)
scaffold0020 (136-184)||(159892-159940)


Alignment Details
Target: chr5 (Bit Score: 317; Significance: 1e-179; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 7 - 356
Target Start/End: Original strand, 36796497 - 36796848
Alignment:
Q  7 ttcgtgttcatgtgttcttcgctatggatttagtaactgctagtgtttaattgataatttgcgttttgaattgtgatgtttcggttttggaattgcgttt 106  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36796497 ttcgtgttcatgtgttcttcgctatgaatttagtaactgctagtgtttaattgataatttgcgttttgaattgtgatgtttcggttttggaattgcgttt 36796596  T
Q  107 agattaagatttagaaactacttgaggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttga 206  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36796597 agattaagatttagaaactacttgaggcttgtttggattgacttatttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttga 36796696  T
Q  207 aacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataattta 306  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36796697 aacagtttactacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaaacagcttatagcttatgtgaaaataattta 36796796  T
Q  307 accttattttattttttgctgcagaaataacttat--atatgcgcttattat 356  Q
    |||||||||||||||||| ||||||||||||||||  |||||| ||||||||    
T  36796797 accttattttattttttgttgcagaaataacttatacatatgcacttattat 36796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 9202754 - 9202877
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttt 321  Q
    ||||||||||||||| ||| |||||||  |||||| | ||| ||| |  |||||| |||||||| |||||| |||||| |||||||| ||||||||| ||    
T  9202754 gttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatctt 9202853  T
Q  322 ttgctgcagaaataacttatatat 345  Q
    ||||| |||||||| |||||||||    
T  9202854 ttgctacagaaatagcttatatat 9202877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 14331517 - 14331405
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagctgtt 235  Q
    ||||||||||||||| |||||||||||||| || ||||| ||||  ||||| || ||||||||||||   |||||| ||| |||| || ||||||||| |    
T  14331517 tgtttggattgacttatttgagcttatctactgtcataagcactcttgagattgtttggaaaaacttacaaaacagcttatgacatgtccataagctgat 14331418  T
Q  236 ttcagtttatttt 248  Q
    ||||| |||||||    
T  14331417 ttcagcttatttt 14331405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 324
Target Start/End: Complemental strand, 41534590 - 41534404
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa-cagtttacgacacgttcataagctg 233  Q
    |||||||||||||||| |||||||| ||||| |||||||||   |||||||| || |||| | ||||| ||||| ||| ||| |||  ||||||||||||    
T  41534590 ttgtttggattgacttatttgagctaatctactgacataaatt-ttgtgagattgtttgggataacttgtgaaaacagcttatgac--gttcataagctg 41534494  T
Q  234 ttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttg 324  Q
    ||||||| |||||| |  ||||| || || |||||  |||||| || ||||||||||   || ||| |||||| | |||||||||||||||    
T  41534493 ttttcagattatttcttcaagttctcaaaaatagcttatgaaaacaacttatagcttccatg-aaacaatttagctttattttattttttg 41534404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 36796934 - 36796996
Alignment:
Q  44 tgctagtgtttaattgataatttgcgttttgaattgtgatgtttcggttttggaattgcgttt 106  Q
    |||||| | |||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||    
T  36796934 tgctagagattaattgatattttgcattttgaattgtgatatttcggttttggaattgtgttt 36796996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 315
Target Start/End: Original strand, 34736446 - 34736626
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaa-acagtttacgacacgttcataagctgt 234  Q
    ||||||||||||||| |||||||||||||  ||||||||    ||||||||| | |||| | |||||||||| |||| | | |||| ||| |||||||||    
T  34736446 tgtttggattgacttatttgagcttatctggtgacataagtt-ttgtgagacagtttgggagaacttttgaacacagctaatgacatgtttataagctgt 34736544  T
Q  235 tttcag-tttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattt 315  Q
    || ||| ||| ||||| ||| || ||||| ||||| ||||| | ||| |||||||||||   ||||||||||| | ||||||    
T  34736545 ttacagctttgtttttataaattctccaagatagctaatgataacagtttatagcttatacaaaaataatttagctttattt 34736626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 14706205 - 14706253
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  14706205 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 14706253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 4855840 - 4855793
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  4855840 gattgacttatttgagcttatataatgacttaaacacttgtgagactg 4855793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 345
Target Start/End: Complemental strand, 7674756 - 7674589
Alignment:
Q  179 ttgtgagactgcttggaaaaactt-ttgaaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaag 277  Q
    |||||||||||||||||| ||||| | ||||||  ||| |||| ||| ||||| ||||||||| |||||||   || || ||||| |||||  ||||||     
T  7674756 ttgtgagactgcttggaagaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaa 7674657  T
Q  278 cagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttatatat 345  Q
    ||  |||| ||||||  ||||| |||||||  ||||||||| ||||| |  ||||||| |||||||||    
T  7674656 cattttatggcttataagaaaacaatttaaatttattttatcttttggtatagaaatagcttatatat 7674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 26004916 - 26004982
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt 202  Q
    ||||||||||||||| ||| |||||||||| |  ||||| ||||||| | |||||||||||||||||    
T  26004916 tgtttggattgacttattttagcttatctactagcataagcacttgtcaaactgcttggaaaaactt 26004982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 444064 - 444015
Alignment:
Q  145 tgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    |||||| ||||||||||||||||  |||||||||||||||||||| ||||    
T  444064 tgacttatttgagcttatctaattgcataaacacttgtgagactgtttgg 444015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 4855906 - 4855869
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  4855906 tttgagcttatctaatgacttaaacacttgtgagactg 4855869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 12425631 - 12425534
Alignment:
Q  226 ataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||| ||||||||  |||||||  |||||| ||||| |||||   ||||| |||||||||||||||  ||||| |||||||| ||||||||| ||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatctttt 12425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 323
Target Start/End: Original strand, 16937802 - 16937990
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa-cagtttacgacacgtt-cataagctg 233  Q
    ||||||||||| ||| |||||||||||||| |  |||||    |||||||| || |||||| ||||| ||||| ||| ||| ||||  || ||||||||     
T  16937802 tgtttggattggcttatttgagcttatctactagcataagtt-ttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagctt 16937900  T
Q  234 ttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||||| |||||||  |||||| |||||||||||  || ||| || |||||||| |||   |||| |||||||| ||||||||| ||||    
T  16937901 ttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaacgttattttatctttt 16937990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 17369354 - 17369301
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||| ||||| |||||||| |||||||| ||||||||| ||||    
T  17369354 tgtttggattgacttatttgaacttatctactgacataatcacttgtgacactg 17369301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 32194011 - 32194064
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||| |||||||||| ||||||| ||||  |||||||||||||    
T  32194011 tgtttggattgacttatttgagcttaactaatgatataagaacttgtgagactg 32194064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 499650 - 499762
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgt 234  Q
    ||||||||||||||| |||||||||| ||| |||||||| ||| ||| || ||| |||| | ||||| || |||||| ||| |||| ||| | ||| |||    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgttaacaagttgt 499749  T
Q  235 tttcagtttattt 247  Q
    |||||| ||||||    
T  499750 tttcagcttattt 499762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 4014430 - 4014550
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttt 321  Q
    ||||||||||||||||||| |||||||  |||||| ||||| |||||  |||||| ||||||||   || |   |||| ||| |||| ||||||||| ||    
T  4014430 gttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatctt 4014529  T
Q  322 ttgctgcagaaataacttata 342  Q
    |||||  ||||||| ||||||    
T  4014530 ttgctatagaaatagcttata 4014550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 7908017 - 7907961
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    |||||| ||||||||| |||||||||||| |||||||| |||||| ||||| |||||    
T  7908017 tttgagtttatctaataacataaacacttatgagactgtttggaagaacttatgaaa 7907961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 11153365 - 11153421
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgctt 192  Q
    ||||||||||| |||||||||||||||||| |  |||||||||||| ||||| ||||    
T  11153365 tgtttggattggcttgtttgagcttatctactagcataaacacttgcgagacagctt 11153421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 39105528 - 39105408
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttt 321  Q
    ||||||||||| |||| || |||||||  |||||| ||||| |||||  |||||| ||| |||||||||||  ||||| |||||||| | |||| || ||    
T  39105528 gttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatt 39105429  T
Q  322 ttgctgcagaaataacttata 342  Q
    | |||  ||||||| ||||||    
T  39105428 tagctatagaaatagcttata 39105408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 5377114 - 5377169
Alignment:
Q  134 cttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||| |||||| ||| |||||||||||||| |||||||| ||||||| ||||||    
T  5377114 cttgttcggattggcttatttgagcttatctattgacataagcacttgtaagactg 5377169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 7319466 - 7319379
Alignment:
Q  226 ataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttat 313  Q
    ||||| || |||||| |||||||| |||||| ||||| |||||  | |||| ||| ||||||||||| |||||| |||||||| ||||    
T  7319466 ataagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactttat 7319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 40335787 - 40335850
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    |||| ||||||||||||||| |||||| ||||||| |  || ||||||||||||||||| ||||    
T  40335787 aggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgagactgtttgg 40335850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 40452306 - 40452235
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||| ||||||||||||||    ||||||||||||| |||||||||| ||||||  ||||||| ||||||    
T  40452306 atgaaaacagcttatagcttaaaccaaaataatttaactttattttattatttgctatagaaatatcttata 40452235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 6587097 - 6587183
Alignment:
Q  206 aaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttat 292  Q
    |||||| ||| |||| ||||||||||||||| ||| |||||||   ||||| |||| ||||||  |||||| || ||||||||||||    
T  6587097 aaacagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttat 6587183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 16016352 - 16016398
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||| |||||||||||| |||||||||| ||||||| ||||||    
T  16016352 attgacttatttgagcttatcaaatgacataagcacttgtcagactg 16016398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 34117578 - 34117659
Alignment:
Q  258 tccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    ||||| |||||  ||||||||| |||||||||||| || |||||||   |||||||||||| ||||| |  ||||||||||||||    
T  34117578 tccaagatagcttatgaaagcaacttatagcttatatgtaaataat---accttattttatcttttgttaaagaaataacttata 34117659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 39594962 - 39594920
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    ||||||||||||||||||| ||||||||||||||  |||||||    
T  39594962 ggcttgtttggattgacttatttgagcttatctaccgacataa 39594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 11297115 - 11297168
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||| |||||||| ||| |||||||||| || ||||||||||||| ||||||    
T  11297115 tgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactg 11297168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 11457241 - 11457196
Alignment:
Q  144 ttgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||| |||||||||||||| || || |||||||||||||||||    
T  11457241 ttgacttatttgagcttatctattggcagaaacacttgtgagactg 11457196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 12857345 - 12857390
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagc 268  Q
    |||| ||||| ||||||| ||||||||||||||| |||||||||||    
T  12857345 ttcacaagcttttttcagcttatttttgtaagttctccaatatagc 12857390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 13508590 - 13508541
Alignment:
Q  137 gtttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||| ||||||| ||||| |||||||| || |||||||||||||||||    
T  13508590 gtttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 19138634 - 19138675
Alignment:
Q  141 ggattgacttgtttgagcttatctaatgacataaacacttgt 182  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  19138634 ggattgacttttttgagctaatctattgacataaacacttgt 19138675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 28578999 - 28578954
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacac 178  Q
    ||||||||| |||||||| |||||||||||||| ||||| ||||||    
T  28578999 gcttgtttgaattgacttatttgagcttatctactgacaaaaacac 28578954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 7985033 - 7984965
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagctt 290  Q
    ||||||||||||||||||| |||||||  ||| || ||||| |||||  ||||||  ||||||||||||    
T  7985033 gttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttatagctt 7984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 9174967 - 9174915
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||||||| |||||||||||||| |  ||||||| || ||||||||    
T  9174967 tgtttggattgacttatttgagcttatctattagcataaacgctcgtgagact 9174915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 10771809 - 10771857
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    ||||||||| ||| |||||||||||||| || ||||| |||||||||||    
T  10771809 tttggattggcttatttgagcttatctactggcataagcacttgtgaga 10771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 11615575 - 11615619
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgt 182  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||    
T  11615575 tttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 12407660 - 12407700
Alignment:
Q  147 acttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  12407660 acttatttgaacttatctattgacataaacacttgtgagac 12407700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 19177594 - 19177538
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||| |||||| ||| ||| || ||| |||||||||||||||| ||||    
T  19177594 tttggattgacttatttgagtttacctattggcatgaacacttgtgagactgtttgg 19177538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 34198572 - 34198524
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||||||||| |||||| |||| || | ||||||||||||||||    
T  34198572 tgtttggattgacttatttgagtttatttactaacataaacacttgtga 34198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 35299916 - 35299880
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacat 172  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  35299916 tgtttggattgacttatttgagcttatctattgacat 35299880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 37969019 - 37968975
Alignment:
Q  145 tgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||||||||| ||||||||  |||||||| ||||    
T  37969019 tgacttgtttgagcttatctactgacataagtacttgtgaaactg 37968975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 41419471 - 41419431
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaa 175  Q
    |||||||||||||||| |||||||| ||||| |||||||||    
T  41419471 ttgtttggattgacttatttgagctaatctactgacataaa 41419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 42583348 - 42583412
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttata 286  Q
    ||||||||| |||||| ||||||| ||| || ||||||||||||||   |||||| |||||||||    
T  42583348 gttcataagttgttttaagtttatatttatatgttttccaatatagattatgaaaacagcttata 42583412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 324
Target Start/End: Complemental strand, 6292644 - 6292455
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagctgt 234  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||| ||||| || |||| | || |||| |||||| ||| |||| |||||||||||||    
T  6292644 ttgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggagaatttttaaaacagcttatgacatgttcataagctgt 6292545  T
Q  235 tttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttg 324  Q
    |||||| |||||||  |||| | ||||| ||||   | ||||  ||||||||  ||||||||||||||||| || ||||| | |||||||    
T  6292544 tttcagcttattttcataagctctccaaaatagtttacgaaaatagcttataagttatgtgaaaataatttgactttattattttttttg 6292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 33723301 - 33723413
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt-ttgaaacagtttacgacacgttcataagctgt 234  Q
    ||||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||||| ||||||| | ||||||| | | |||| |||||| || |||    
T  33723301 tgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatgt 33723400  T
Q  235 tttcagtttattt 247  Q
    |||||| ||||||    
T  33723401 tttcagcttattt 33723413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 9656713 - 9656600
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttt 322  Q
    ||||||||||||||| || |||||||  ||| |  ||||  |||||  |||||  ||||||||||||||| ||||||||||||||| |||||||||||||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttattttt 9656614  T
Q  323 tgctgcagaaataa 336  Q
    ||||  ||||||||    
T  9656613 tgctatagaaataa 9656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 335
Target Start/End: Original strand, 31517675 - 31517859
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa-cagtttacgacacgttcataagctgttttcagtttatttttg 250  Q
    ||||||||||| || || ||||| |||||||||||||| |||| | ||||| | ||| ||  | | |||| ||||||||||||||||||| |||||||      
T  31517675 tttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttca 31517774  T
Q  251 taagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaata 335  Q
    |||| | ||||| | ||   |||||  ||||||||||||||| |||||  |||||||| ||||||||| ||||| || |||||||    
T  31517775 taagctctccaagacagattatgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 37593611 - 37593716
Alignment:
Q  144 ttgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaa-acagtttacgacacgttcataagctgttttcagtt 242  Q
    ||||||| ||||||||||| || || ||||||||||||| |||||| |||| ||||||  |||| |||  ||| |||| ||||||||||||||||||| |    
T  37593611 ttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagct 37593710  T
Q  243 tatttt 248  Q
    ||||||    
T  37593711 tatttt 37593716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 3597200 - 3597260
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaa 196  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||| ||||||    
T  3597200 tgtttggattgacttatttgaggttatctaatgatataaccacttgtgagactgtttggaa 3597260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 6932876 - 6932992
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataag 230  Q
    ||||||||||| |||||||| |||||| ||||| | ||||| |||||||||||| |||| |||| | | || | ||||||||||| || | |||||||||    
T  6932876 aggcttgtttgtattgacttatttgagattatccactgacacaaacacttgtgaaactggttgggagagctatggaaacagtttatgatatgttcataag 6932975  T
Q  231 ctgttttcagtttattt 247  Q
     |  |||||||||||||    
T  6932976 ttagtttcagtttattt 6932992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 21002310 - 21002198
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagc 231  Q
    ||||||||||||||| ||| |||||||||||||| |  |||||  ||||||||||||| |||||| |    | ||||| ||||| |||| || |||||||    
T  21002310 ggcttgtttggattggcttatttgagcttatctacttgcataagaacttgtgagactgtttggaaga----tggaaactgtttatgacatgtccataagc 21002215  T
Q  232 tgttttcagtttatttt 248  Q
    |||||||| ||||||||    
T  21002214 tgttttcaatttatttt 21002198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 317
Target Start/End: Original strand, 7217993 - 7218175
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagt-ttacgacacgttcataagctgt 234  Q
    ||||||||||||||| ||| ||||||||||  | ||||||||||| ||||| || ||||   | ||| |||||  |  ||| |||||||||| |||||||    
T  7217993 tgtttggattgacttatttaagcttatctaccggcataaacacttctgagattgtttgggggagcttgtgaaaacgacttatgacacgttcacaagctgt 7218092  T
Q  235 tttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttatttta 317  Q
    |||||  |||||||  |||||| ||||  ||||   |||||| || |||||||||||| |||||| ||||| || ||||||||    
T  7218093 tttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 29793619 - 29793669
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  29793619 tttgtattgacttatttgagcttatctactgacataaacacttgtgagact 29793669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 4757487 - 4757438
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgagac 4757438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 34536313 - 34536256
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||||||| |||||| ||||| | |||||| |||||||||||||||||||||||    
T  34536313 ggcttgtttggaatgacttatttgaacgtatctattgacataaacacttgtgagactg 34536256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 37842356 - 37842481
Alignment:
Q  217 gacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttatttt 316  Q
    |||| |||||||||| |||||||| |||||||| |||||| | ||| |||||  |||||| || ||||||||||||  ||| | | |||||| ||||||     
T  37842356 gacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcgaacacagtttaactttatttc 37842455  T
Q  317 attttttgctgcagaaataacttata 342  Q
    || |||||||  ||||||| ||||||    
T  37842456 atcttttgctatagaaatagcttata 37842481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 299
Target Start/End: Complemental strand, 4622244 - 4622080
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaact-tttgaaacagtttacgacacgttcataagctgt 234  Q
    |||||| |||||||| ||| |||||| ||||||||||||  |||||| |||||| |||||| | ||  | | ||||  ||| |||| || ||||||||||    
T  4622244 tgtttgaattgacttatttaagcttaactaatgacataagaacttgttagactgtttggaagatctaatgggaacatcttatgacatgtccataagctgt 4622145  T
Q  235 tttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaa 299  Q
    ||| || |||||||   ||| | ||||| |||||| ||| || ||||||||||||||| ||||||    
T  4622144 ttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaa 4622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 318
Target Start/End: Original strand, 10199330 - 10199510
Alignment:
Q  139 ttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgtttt 237  Q
    |||||||||||| |||||||||||||| | |||||| ||||||||| |||  |||| | ||||  || ||| || ||| |||| ||||||||| ||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgtttt 10199429  T
Q  238 cagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttat 318  Q
    ||| |||||||  |||| | || || |||||  ||||||  ||||||| | ||||  ||||||| ||| || |||||||||    
T  10199430 cagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttat 10199510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 28467230 - 28467286
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||| |||| ||||    
T  28467230 tttggattggcttgtttgagcttatctattgacacaaacacttgtgaaactgtttgg 28467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 33976329 - 33976278
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    ||||||||||||||| ||||||||||| ||||||||| | ||||||||||||    
T  33976329 tgtttggattgacttatttgagcttatttaatgacatcagcacttgtgagac 33976278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 35017736 - 35017674
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgga 195  Q
    |||||||| ||||| ||| |||||||||||||| || ||||||||||||||||| || |||||    
T  35017736 gcttgtttagattggcttatttgagcttatctattggcataaacacttgtgagattgtttgga 35017674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 48748514 - 48748564
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||| |||||||| |||||||||||| | ||||||||||||||||||||    
T  48748514 tgtttgaattgacttatttgagcttatccattgacataaacacttgtgaga 48748564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 24460320 - 24460373
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||| ||||| |||||||| |||||| | ||||||||||||||    
T  24460320 tgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactg 24460373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 43420393 - 43420352
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagactgcttg 193  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  43420393 tttgagcttatctacagacataaacacttgtgagactgcttg 43420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 5157221 - 5157165
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||||||| |||| ||||    
T  5157221 tttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgg 5157165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 25944596 - 25944540
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||  |||||||| |||| |||||| || ||||||||||||||||||||||    
T  25944596 ggcttgtttcaattgacttatttgcgcttatttactgacataaacacttgtgagact 25944540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 52014038 - 52013986
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||| |||| |||||||||||||| || ||||||||| |||||||||    
T  52014038 tgtttggattaacttatttgagcttatctattggcataaacacgtgtgagact 52013986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 49517085 - 49517014
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||| ||||||||||||||  |||||| ||||| || ||||||||| ||||| |  ||||||||||||||    
T  49517085 atgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttata 49517014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 51929383 - 51929434
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||| |||||||||||||| |||||||| ||| ||||| ||||    
T  51929383 tttggattgacttttttgagcttatctactgacataagcacctgtgacactg 51929434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 601191 - 601133
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    |||||||||||||||  |||||||||||| || |||||| ||||| |||||||| ||||    
T  601191 tgtttggattgacttacttgagcttatctgataacataagcacttttgagactgtttgg 601133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 4868555 - 4868497
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||||| || |||||  ||||||| |||||||  ||||||||||||||    
T  4868555 aggcttgtttggattgatttatttgaatttatctattgacataggcacttgtgagactg 4868497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 17631025 - 17631067
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacactt 180  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||    
T  17631025 tttggattgacatgtttgagtttatctattgacataaacactt 17631067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 38170616 - 38170714
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcag 240  Q
    |||||||| ||| | ||||| || || ||| ||||||||||||||||||||| | | ||| || |||||| ||| |||| ||||||||| |||||||||    
T  38170616 attgacttatttaaccttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcag 38170714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 41505829 - 41505787
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||    
T  41505829 ggcttgtttggattggcttatttgagcttatctactgacataa 41505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 28689441 - 28689537
Alignment:
Q  205 gaaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagc--aaatgaaagcagcttatagcttatgtgaaaa 299  Q
    ||||||| ||| |||| || |||||| ||||||||| |||||||  |||| ||||||| |||||  | |||||| || |||||||||||| ||||||    
T  28689441 gaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 32958788 - 32958739
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    ||||| ||||||||| |||||||||||||| || ||||| ||||||||||    
T  32958788 tgtttagattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 34290299 - 34290230
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttat 292  Q
    |||||||| ||||||||| |||||||  |||||| | ||| |||||  |||||| |||||||||||||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttat 34290230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 247
Target Start/End: Original strand, 35079996 - 35080100
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagctgttttcagt 241  Q
    ||||||||| |||||| ||||| | |||  ||||| |||||||||||  |||||||| ||| || ||||  ||| |||| |||||||||||||||| ||     
T  35079996 gattgacttatttgagtttatcgattgaattaaac-cttgtgagactctttggaaaagcttatggaacaacttatgacatgttcataagctgttttgagc 35080094  T
Q  242 ttattt 247  Q
    ||||||    
T  35080095 ttattt 35080100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 45975753 - 45975684
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttat 292  Q
    |||||||||||||||||| |||||||  ||| || ||||| |||||  |||||| |||||| ||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttat 45975684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 2294972 - 2294884
Alignment:
Q  225 cataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttat 313  Q
    |||||||||||||||  ||||||| ||||||| ||||| ||||   ||||||  ||||||||||||||   |||| |||||||| ||||    
T  2294972 cataagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaactttat 2294884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 2522744 - 2522696
Alignment:
Q  139 ttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    |||||||||||| |||||| ||||||| || ||||||||||||| ||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgtaagac 2522696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 4256108 - 4256168
Alignment:
Q  282 ttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||||||||  |||||||||||||| ||||| ||| ||||| || ||||||| ||||||    
T  4256108 ttatagcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttata 4256168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 4768764 - 4768860
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcagtttattt 247  Q
    |||||| ||||| | || |||||||||||||||||| | |||| |||||||  | |||||| |||||||| || |||||  ||||||||| ||||||    
T  4768764 tttgagtttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaacagcttacgacatgtccataacttgttttcagcttattt 4768860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 15515701 - 15515657
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    ||||||||| |||||||||||||| || ||||||||| |||||||    
T  15515701 gattgacttatttgagcttatctactggcataaacacgtgtgaga 15515657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 15558362 - 15558310
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||||| || |||||||||||| | || | |||||||||||||||||    
T  15558362 tgtttggattgagttatttgagcttatcgactggcttaaacacttgtgagact 15558310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 340
Target Start/End: Original strand, 29007668 - 29007840
Alignment:
Q  169 acataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatag 267  Q
    ||||||| || |||||||||| || | | | |||||| ||||| |||| || | ||||||||| ||||||||| ||||||   |||| ||| |||  |||    
T  29007668 acataaatacatgtgagactgttttggatagcttttggaaacaatttatgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtag 29007767  T
Q  268 caaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataactta 340  Q
    |  |||||| || |||||||||||| |||||||| ||| || ||| ||| | ||||| |  ||||||||||||    
T  29007768 ccgatgaaaacaacttatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataactta 29007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 38867752 - 38867800
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||| ||| | ||||||  |||||||||||||||||||||||||    
T  38867752 tgtttggatggacgtatttgagtctatctaatgacataaacacttgtga 38867800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 326
Target Start/End: Complemental strand, 46423392 - 46423339
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgct 326  Q
    |||||| ||||||||||||||||  |||| ||||||||  ||||||||||||||||    
T  46423392 atgaaaacagcttatagcttatgccaaaacaatttaac--tattttattttttgct 46423339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 136 - 311
Target Start/End: Complemental strand, 45541722 - 45541546
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgt 234  Q
    ||||||||||||||| ||||||||||| |||||  |||||||||||| |||||| || ||| ||||| || |||||| ||| |||| |||||||||||||    
T  45541722 tgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctgt 45541623  T
Q  235 tttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaacctt 311  Q
    |||||| ||||| |  |||||| ||||| |||||  ||||||  |   ||||||||||  |||||||||||||||||    
T  45541622 tttcaggttattctcataagttatccaagatagcttatgaaaataaactatagcttatacgaaaataatttaacctt 45541546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 21872214 - 21872286
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    |||||||||| |||| ||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||||    
T  21872214 tgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaa 21872286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 50600191 - 50600254
Alignment:
Q  229 agctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttat 292  Q
    |||||||||||| |||||||  |||||| |||||||||||  |||||| |||||||||||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagcttat 50600254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 16072960 - 16072998
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  16072960 tgtttggattgacttatttgagcttatctaatgacataa 16072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 324
Target Start/End: Original strand, 36783340 - 36783442
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttt 321  Q
    ||||||||||||||||||| |||| ||  ||| |  |||||||||||  |||||| ||||| |||| |||| |||||| ||||| || ||||||||| ||    
T  36783340 gttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatctt 36783439  T
Q  322 ttg 324  Q
    |||    
T  36783440 ttg 36783442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 44061032 - 44061149
Alignment:
Q  224 tcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    |||||||||||||| || ||| |||  |||||| || || ||| || |||||| || ||||||||||||   |||| |||||||||||||||||| ||||    
T  44061032 tcataagctgtttt-agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaaccttattttatctttt 44061130  T
Q  324 gctgcagaaataacttata 342  Q
    |||  ||||||| ||||||    
T  44061131 gctatagaaatagcttata 44061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 20210847 - 20210900
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||||||| || |||||| ||||||| |||||||| ||||||||||||||    
T  20210847 tgtttggattgatttatttgaggttatctactgacataaccacttgtgagactg 20210900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 33965403 - 33965460
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||| |||||||| | |||||||||||||| |||| ||||||| ||||||||||    
T  33965403 ggcttgttcggattgacatatttgagcttatctactgacttaaacacatgtgagactg 33965460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 51929892 - 51929843
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    ||||||||||||||| |||||||||||||| |  ||||||||||||||||    
T  51929892 tgtttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 44014717 - 44014789
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    ||||||||||| ||| |||||| ||||||| |  |||||||||||||||||||| |||  ||||||| |||||    
T  44014717 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaa 44014789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 22667548 - 22667501
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||| ||| |||||||||||||| |||||||| ||||||||||||||    
T  22667548 gattggcttatttgagcttatctactgacataagcacttgtgagactg 22667501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 22724187 - 22724140
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||| ||| |||||||||||||| |||||||| ||||||||||||||    
T  22724187 gattggcttatttgagcttatctactgacataagcacttgtgagactg 22724140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 31512537 - 31512486
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||||||||||||||||||||||| ||| |  ||| |||||||||||    
T  31512537 gcttgtttggattgacttgtttgagcttacctactagcatgaacacttgtga 31512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 20874229 - 20874271
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaaca 177  Q
    |||||||||||||||| |||||| |||| ||||||||||||||    
T  20874229 ttgtttggattgacttatttgagtttatataatgacataaaca 20874271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 316
Target Start/End: Complemental strand, 21367731 - 21367637
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttatttt 316  Q
    ||||| ||||||||||||| |||||||  |||||| ||||| |||||  |||||| || ||||||  ||||  ||||| |||||||| |||||||    
T  21367731 gttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 53493844 - 53493882
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  53493844 tgtttggattgatttgtttgagcttatctaattacataa 53493882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 20173811 - 20173860
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||    
T  20173811 tttggattgacttatttgagcgtatctattgaaataagcacttgtgagac 20173860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 26990144 - 26990181
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacata 173  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  26990144 tgtttggattgacttatttgagcttatctactgacata 26990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 28622006 - 28622074
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagctta 291  Q
    |||||||||||||||||| |||||||  |||||| || || ||||   |||||| ||||||||||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagctta 28622074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 32663789 - 32663737
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||| ||| ||||||||||||||  |||| | ||||||||||||||    
T  32663789 tgtttggattggcttatttgagcttatctaccgacaaatacacttgtgagact 32663737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 33405222 - 33405286
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaata 335  Q
    |||||| ||||||||||||||| |||||| || ||||| ||||||||  |||||||  |||||||    
T  33405222 atgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaata 33405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 34958444 - 34958396
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    |||||||||| ||||||||||| | ||||| |||| |||||||||||||    
T  34958444 tgtttggattaacttgtttgagatgatctattgacctaaacacttgtga 34958396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 37138433 - 37138381
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||| ||| || ||  ||||||| ||||||||||||||||||||||    
T  37138433 tgtttggattggcttattagaatttatctactgacataaacacttgtgagact 37138381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 41164909 - 41165017
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt-ttgaaacagtttacgacacgttcataagctgt 234  Q
    ||||||||||  ||| ||||| ||||||||  | |||||  |||||||| | || |||||||||||| || |||||||||| |||| |||||| || |||    
T  41164909 tgtttggattagcttatttgaacttatctaccggcataagaacttgtgacaatgtttggaaaaacttattaaaacagtttatgacatgttcattagatgt 41165008  T
Q  235 tttcagttt 243  Q
    ||| |||||    
T  41165009 ttttagttt 41165017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 50298659 - 50298499
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagctgttttcagtt 242  Q
    ||||| || ||| |||||||||| |||||||| |||||||||||||| |||||||||||| | ||| || ||| |||| ||||||||||||||||||       
T  50298659 attgatttattttagcttatctactgacataagcacttgtgagactgtttggaaaaacttataaaatagcttatgacatgttcataagctgttttca--- 50298563  T
Q  243 tatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttatt 314  Q
            |||||||||||| || ||  |||||| | | |||||||||||||||||| |||||||| |||||    
T  50298562 --------taagttttccaagatggcttatgaaaactgattatagcttatgtgaaaacaatttaactttatt 50298499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 6364209 - 6364093
Alignment:
Q  226 ataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgc 325  Q
    ||||||||||||||| ||||||| ||||||| |||| ||||||  ||||||   |||||||||||||||||| | ||||| || ||||||||| |||||     
T  6364209 ataagctgttttcagcttattttcgtaagttctccattatagcttatgaaaattgcttatagcttatgtgaacagaatttcactttattttatcttttgt 6364110  T
Q  326 tgcagaaataacttata 342  Q
    |  ||||||| ||||||    
T  6364109 tatagaaatagcttata 6364093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 1017176 - 1017113
Alignment:
Q  139 ttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt 202  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| |||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaactt 1017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 18512434 - 18512486
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||| |||| |||| |||||||||||||| ||||||||||||||||||||||    
T  18512434 tgtttcgattaacttatttgagcttatctactgacataaacacttgtgagact 18512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 18628478 - 18628530
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||| ||||    
T  18628478 gattgacgtatttgagcttatctactgacataaacacttgtgagactgtttgg 18628530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 55870261 - 55870313
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||| |||| |||||| ||||||||||||||||||| ||||||||||    
T  55870261 tgtttggattaacttatttgagtttatctaatgacataaacatttgtgagact 55870313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 39178182 - 39178289
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagc 231  Q
    |||||||||||||||| | ||| ||| |||||| |||||||||||||| ||| |||| |||| | ||||| || |||| | ||| |||||||| |||||     
T  39178182 gcttgtttggattgacgtatttaagcatatctactgacataaacacttttgacactgtttgggagaacttatgaaaaccgcttatgacacgttaataaga 39178281  T
Q  232 tgttttca 239  Q
    ||||||||    
T  39178282 tgttttca 39178289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 49219154 - 49219083
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||| || |||||||||||| |||||||||||| || ||||||||| ||||| |  ||||||||||||||    
T  49219154 atgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttata 49219083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 30338529 - 30338587
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||| | |||||||| |||||||||||||| ||  |||||||||||||||||||    
T  30338529 aggcttgttggaattgacttttttgagcttatctactgggataaacacttgtgagactg 30338587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 40174597 - 40174523
Alignment:
Q  252 aagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgct 326  Q
    ||||| |||||| ||||  |||||| ||||||||||||| | |||||| |||||||| ||| |||||||||||||    
T  40174597 aagttctccaatgtagcttatgaaaacagcttatagcttttatgaaaacaatttaactttaatttattttttgct 40174523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 21043155 - 21043267
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgt 234  Q
    ||||||||||||||| |||||| ||| |||  | ||| || ||||||||||||| |||| | |  || || |||||| ||| ||||||||||||||||||    
T  21043155 tgtttggattgacttatttgagtttacctacaggcatgaa-acttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagctgt 21043253  T
Q  235 tttcagtttatttt 248  Q
    ||||||| ||||||    
T  21043254 tttcagtgtatttt 21043267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 24193683 - 24193634
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    ||||||||||||||| |||||||||||||  || ||||||||||||||||    
T  24193683 tgtttggattgacttatttgagcttatctcctggcataaacacttgtgag 24193634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 51630176 - 51630071
Alignment:
Q  221 cgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattt 320  Q
    ||||| |||| ||||||||| |||||||  ||| || | ||| |||||  ||||||  |||||||||||||| | |||| |||||||| ||||||||| |    
T  51630176 cgttcgtaagatgttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatct 51630077  T
Q  321 tttgct 326  Q
    ||||||    
T  51630076 tttgct 51630071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 324
Target Start/End: Original strand, 52746776 - 52746948
Alignment:
Q  154 tgagcttatctaatgacataaacacttgtgagactgcttggaaaaactttt--gaaacagtttacgacacgttcataagctgttttcagtttatttttgt 251  Q
    |||||||||| | || ||||| |||||||||||||  |||  |||||| |   ||||||| ||| |||| ||||||||||||||||||| | |||||  |    
T  52746776 tgagcttatcaactggcataagcacttgtgagactagttgataaaactatatggaaacagcttaagacatgttcataagctgttttcagctgattttcat 52746875  T
Q  252 aagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttg 324  Q
    |||  || ||| |||||  |||||| |||||||| |||||    |||| |||||||| ||||||||| |||||    
T  52746876 aagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatcttttg 52746948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 54277242 - 54277295
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||| ||||||||| ||||| |||||||| |||||||||||||| ||||||||    
T  54277242 tgtttagattgacttatttgaacttatctagtgacataaacacttatgagactg 54277295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 7730753 - 7730699
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||  ||||||||    
T  7730753 gcttgtttggatcgacttatttgagct-atctaatgacataaacacgcgtgagact 7730699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 32072014 - 32071963
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    |||||||| |||||| |||||| ||||||| |||||||| ||||||||||||    
T  32072014 tgtttggactgacttatttgagtttatctattgacataagcacttgtgagac 32071963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 7367973 - 7368031
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||||| |||||| |||||||  | ||||||| |||||||||||| ||||    
T  7367973 tgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgg 7368031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 9316676 - 9316618
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||||| |||||||| ||| | | |||||||||||||||| |||| ||||    
T  9316676 tgtttggattgacttatttgagctcatccatttacataaacacttgtgaaactgtttgg 9316618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 27043749 - 27043787
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  27043749 tgtttggattgacttatttgagcttatctactgacataa 27043787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 49803209 - 49803155
Alignment:
Q  288 cttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||||||||| |||||||| | ||||||| |||||||  ||||||||||||||    
T  49803209 cttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttata 49803155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 56186815 - 56186869
Alignment:
Q  134 cttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||||| |||| || ||| ||||||| | ||||||||||||||||||||    
T  56186815 cttgtttggattaacttattcgagtttatctactaacataaacacttgtgagact 56186869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 17751102 - 17751159
Alignment:
Q  172 taaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcata 228  Q
    |||||||||||||||||| |||||| |||| ||| |||||| |||||||| |||||||    
T  17751102 taaacacttgtgagactgtttggaagaactcttgaaaacagcttacgacatgttcata 17751159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 21953424 - 21953375
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    ||||||||||||||| |||||||||||||| |  ||||| ||||||||||    
T  21953424 tgtttggattgacttatttgagcttatctagtagcataatcacttgtgag 21953375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 28259425 - 28259376
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||| |||||| |||||||||||| | |||||||| |||||||||    
T  28259425 ttgtttggactgacttatttgagcttatcaactgacataagcacttgtga 28259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 38515896 - 38515851
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagc 268  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||    
T  38515896 ttcataagctgttttcagcttatttttataaattttccaaaatagc 38515851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 52169937 - 52169986
Alignment:
Q  134 cttgtttggattgacttgtttgagcttatctaatgacataaacacttgtg 183  Q
    ||||||||||||||||| |||||| ||||||| | |||||| ||||||||    
T  52169937 cttgtttggattgacttatttgagtttatctatttacataagcacttgtg 52169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 52333749 - 52333648
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagctgtt 235  Q
    ||||| ||||| ||| ||||||||||| || |||| ||| |||||||||||||  ||  |||||||||  |||| | ||| |||| ||| ||||||||||    
T  52333749 tgtttcgattggcttatttgagcttatttactgacctaagcacttgtgagactatttcaaaaaactttgaaaacggcttaagacatgtttataagctgtt 52333650  T
Q  236 tt 237  Q
    ||    
T  52333649 tt 52333648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 299
Target Start/End: Complemental strand, 52754679 - 52754587
Alignment:
Q  206 aaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaa 299  Q
    |||||||||| |||  || ||||||||| |||||| ||||||   |||| ||||| | |||||  |||||| ||||||||||||||||||||||    
T  52754679 aaacagtttatgacgtgtccataagctgctttcagcttatttcc-taagatttccgaaatagcttatgaaaacagcttatagcttatgtgaaaa 52754587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 53034707 - 53034756
Alignment:
Q  125 tacttgaggcttgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    |||||| ||||||||||| ||||||| |||||||||||||| ||| ||||    
T  53034707 tacttggggcttgtttggtttgacttatttgagcttatctactgatataa 53034756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 19305075 - 19305027
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    ||||||||||||| |||||| ||||||| |||||||| || ||||||||    
T  19305075 tttggattgacttatttgagattatctattgacataagcatttgtgaga 19305027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 19429391 - 19429447
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||| ||| ||||||||||| || ||  ||||||||||||||||||| ||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgagactgtttgg 19429447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 23582384 - 23582444
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaa 196  Q
    ||||||||||||||| ||||||||||| || ||  |||| ||||| |||||||| ||||||    
T  23582384 tgtttggattgacttatttgagcttatttattggtataatcacttatgagactgtttggaa 23582444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 25717748 - 25717696
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||||||||| ||| ||||||||||| ||  ||||||| |||||||||    
T  25717748 ggcttgtttggattgtcttatttgagcttatgtaccgacataagcacttgtga 25717696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 47118981 - 47119073
Alignment:
Q  232 tgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttg 324  Q
    ||||||||| |||| ||  |||||| | ||| |||||| |||||  || |||||||||||| |||||| |||||||| || |||||| |||||    
T  47118981 tgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatcttttg 47119073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 47146093 - 47146037
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||| ||||| ||||| || || ||||| ||||||||||||| |||||    
T  47146093 tttggattgacttatttgaacttatatattggcataagcacttgtgagactacttgg 47146037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 40688993 - 40689105
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttt 322  Q
    ||||||||||||||| || |||||||  |||||| ||||  |||||  |||||  ||||||||||||||| ||||||||||||||| ||||||||| |||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttt 40689092  T
Q  323 tgctgcagaaata 335  Q
    ||||  |||||||    
T  40689093 tgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 47041957 - 47042010
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||||||||| ||||||| |||||| |||||| |||||||||||||||    
T  47041957 ttgtttggattgacttatttgagcatatctattgacattaacacttgtgagact 47042010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 39907867 - 39907747
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttt 321  Q
    |||||| |||||||||||| |||||||  | |||| || || ||||   |||||| ||| |||||||||||   |||| ||||||||||||||||| |||    
T  39907867 gttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaaccttattttacttt 39907768  T
Q  322 ttgctgcagaaataacttata 342  Q
    ||||||  |||||| ||||||    
T  39907767 ttgctgaggaaatatcttata 39907747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  139 ttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 12234810 - 12234920
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt-ttgaaacagtttacgacacgttcataagctgttt 236  Q
    |||||||||||||  ||||||||||||| || ||| | ||| ||||||||||||||||| | ||| | ||||||  ||| |||| ||  |||||||||||    
T  12234810 tttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgttt 12234909  T
Q  237 tcagtttattt 247  Q
    |||| ||||||    
T  12234910 tcagcttattt 12234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 17942222 - 17942169
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||| ||||||||||||||||||||| ||  |||||||| ||||||||||    
T  17942222 tgtttggaatgacttgtttgagcttatctactgcaataaacacctgtgagactg 17942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 33894778 - 33894725
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||  ||| |||||||||||| |||||||||| ||||||||||||||    
T  33894778 tgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactg 33894725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 34754737 - 34754782
Alignment:
Q  144 ttgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||    
T  34754737 ttgacttgtttgagcttatctattgacacaaacacttatgagactg 34754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 40428559 - 40428518
Alignment:
Q  282 ttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  40428559 ttatagcttatatgaaaataatttaactttattttatttttt 40428518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 47046027 - 47046071
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacactt 180  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||    
T  47046027 tgtttggattgacttatttgtgcttatctactgacataaacactt 47046071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 1418572 - 1418521
Alignment:
Q  134 cttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    ||||||||||||||||| |||||||||||||| || ||||| ||||| ||||    
T  1418572 cttgtttggattgacttatttgagcttatctactggcataagcacttatgag 1418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 22387810 - 22387873
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||||||||||  | || ||||| || |||||||||||| |||||||||| ||||    
T  22387810 aggcttgtttggattgacttactagaacttatttactgacataaacacgtgtgagactgtttgg 22387873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 25130074 - 25130160
Alignment:
Q  201 ttttgaaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatag 287  Q
    |||| |||||||||| |||| |||||||||||||||||||  ||||||   || |||||||| |||||   ||||| ||||||||||    
T  25130074 ttttaaaacagtttatgacatgttcataagctgttttcagcatattttcagaaattttccaagatagcttttgaaaacagcttatag 25130160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 25670512 - 25670618
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcagt 241  Q
    ||||||||  ||||||||||||| |||||||| | |||||||||||| |||  ||||||| || |||||  ||| |||| ||| ||||  |||||||||     
T  25670512 attgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagc 25670611  T
Q  242 ttatttt 248  Q
    |||||||    
T  25670612 ttatttt 25670618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 25907567 - 25907609
Alignment:
Q  147 acttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  25907567 acttgtttgagctaatctactgacataagcacttgtgagactg 25907609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 4970706 - 4970782
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    |||| ||||||||||||||| |||||||||||||  |||||| ||  |||||||||||| |||| | ||||| |||||    
T  4970706 aggcctgtttggattgacttatttgagcttatctcgtgacat-aagtcttgtgagactgtttgggagaacttatgaaa 4970782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 5276643 - 5276594
Alignment:
Q  134 cttgtttggattgacttgtttgagcttatctaatgacataaacacttgtg 183  Q
    |||||||||||||||||   |||||||||||| | |||||||||||||||    
T  5276643 cttgtttggattgacttagatgagcttatctactaacataaacacttgtg 5276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 23215006 - 23214953
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||| ||||| |||||||| |  ||||||||||| ||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactg 23214953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 29363659 - 29363606
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||| ||| ||||| |||||||| | |||||| ||||||||||||||    
T  29363659 tgtttggattggcttatttgaacttatctactaacataagcacttgtgagactg 29363606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 30535714 - 30535601
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgt 234  Q
    |||||| |||||||| |||||| | || || ||||||||||||||| ||||||| || | | ||||| || |||||  ||| || | |||| ||||||||    
T  30535714 tgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgttcgtaagctgt 30535615  T
Q  235 tttcagtttatttt 248  Q
    |||||| |||||||    
T  30535614 tttcaggttatttt 30535601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 49060545 - 49060484
Alignment:
Q  281 cttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||||||||| | |||||||||| || ||||||||||||||| |  ||||||| ||||||    
T  49060545 cttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttata 49060484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 1432019 - 1432093
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaac---cttattttattttttgctgcagaaataacttata 342  Q
    |||||| ||||| ||||||||| |||||||||||||||    ||||||||| ||||| |  ||||||||||||||    
T  1432019 atgaaaacagctgatagcttatatgaaaataatttaacttttttattttatcttttgttatagaaataacttata 1432093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 7244832 - 7244788
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacactt 180  Q
    ||||||||||| |||||||||| ||||||| || |||||||||||    
T  7244832 tgtttggattggcttgtttgagtttatctactgccataaacactt 7244788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 8427162 - 8427106
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    |||||||||| || |||||||||||||| | ||||||  ||||||||||||| ||||    
T  8427162 tttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgg 8427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 30180059 - 30180011
Alignment:
Q  278 cagcttatagcttatgtgaaaataatttaaccttattttattttttgct 326  Q
    |||||||||||||||  ||||| |||||||| ||||||||| |||||||    
T  30180059 cagcttatagcttatacgaaaacaatttaactttattttatcttttgct 30180011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 34036068 - 34035997
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    |||||| |||||||| |||||||||||||| |||||||   | |||||||||| ||||||| ||||| |||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacatatgta-ttgtgagactacttggaagaacttatgaaa 34035997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 40598404 - 40598456
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||||||| |||||||||||||| |  ||| |||||||| ||||||    
T  40598404 tgtttggattgacttatttgagcttatctactagcatgaacacttgcgagact 40598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 29316765 - 29316877
Alignment:
Q  206 aaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataattt 305  Q
    |||||| ||| |||| ||||||||| | ||||||| ||||||   |||||| ||||| |||||  |||||| |||||||||| ||||||||||| |||||    
T  29316765 aaacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaattt 29316864  T
Q  306 aaccttattttat 318  Q
    |||||||||||||    
T  29316865 aaccttattttat 29316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 318
Target Start/End: Complemental strand, 8017585 - 8017402
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgt 234  Q
    ||||||||||||||| |||||| ||||||| |||||||| |||||||| || |  |||| | ||||| || |||||| ||| || | ||||||||  |||    
T  8017585 tgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttatgatatgttcataatttgt 8017486  T
Q  235 tttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttat 318  Q
    |||| |  ||||||  |||||| ||||| |||||  |||||| ||| ||| ||||||| ||||||||||||||| || ||||||    
T  8017485 tttctgcgtattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaactttgttttat 8017402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 18066190 - 18066079
Alignment:
Q  224 tcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||||||| ||||||  |||||||  |||||| ||||| |||||  |||||| ||||||||||||||| |||||| |||||||| |||||| || ||||    
T  18066190 tcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttatttcatatttt 18066091  T
Q  324 gctgcagaaata 335  Q
     ||| |||||||    
T  18066090 actgtagaaata 18066079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 271
Target Start/End: Original strand, 5902477 - 5902604
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcagt 241  Q
    |||||||| ||||| ||||||||  | |||||||||||||||||||| |||||| ||||| || |||||| ||| |||| |||||||| ||||||||||     
T  5902477 attgacttatttgaacttatcta--ggcataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaactgttttcagc 5902574  T
Q  242 ttatttttgtaagttttccaatatagcaaa 271  Q
    || ||||| || ||| ||||| ||| ||||    
T  5902575 ttgtttttatatgttctccaagataacaaa 5902604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 28810371 - 28810435
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaac 200  Q
    ||||||||||||||| ||||||||| |||| || |||||||||||||||| ||| ||||||||||    
T  28810371 tgtttggattgacttatttgagcttctctattggcataaacacttgtgaggctgtttggaaaaac 28810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 22878249 - 22878191
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||||| |||||||||||| | |||||||| |||||||||||||| ||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgg 22878191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 13867029 - 13866976
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||| | |||||||||||||| || ||||||||||||||||||||    
T  13867029 tgtttggattgacctatttgagcttatctactgccataaacacttgtgagactg 13866976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 2416321 - 2416257
Alignment:
Q  278 cagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    ||||||||||||||| | |||| |||||||| | ||||||| ||||||| |||||||||||||||    
T  2416321 cagcttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttata 2416257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 40759311 - 40759259
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  40759311 tgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 41170761 - 41170689
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    ||||||||||| ||| |||||| ||||||| | ||||||||||||||||||||  |||||| ||||| |||||    
T  41170761 tgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaa 41170689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 15370237 - 15370300
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    |||| ||||||||||||||| |||||||||||||| || ||||| || ||||||||||| ||||    
T  15370237 aggcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttgg 15370300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 18179253 - 18179324
Alignment:
Q  229 agctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaat 300  Q
    |||| ||||||| ||||||| ||||||| ||||  |||||  |||||||||||||||||||||| |||||||    
T  18179253 agctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaat 18179324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 40837351 - 40837398
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacac 178  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  40837351 aggcttgtttggattggcttatttgagcttatctactgacataaacac 40837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 43199429 - 43199358
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||| || ||||||||||||  ||| |||||||||| ||||||||| ||||| || ||||||||||||||    
T  43199429 atgaaaacaacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttata 43199358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 40944064 - 40944002
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaa 198  Q
    ||||||||||  ||| |||||| |||||||||||||||| ||||||||| |||| ||||||||    
T  40944064 tgtttggattagcttatttgagtttatctaatgacataagcacttgtgaaactgtttggaaaa 40944002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 353
Target Start/End: Original strand, 1939341 - 1939469
Alignment:
Q  225 cataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagctta-tgtgaaaataatttaaccttattttatttttt 323  Q
    |||||||||||||||  ||||||   |||| | |||| ||||||  |||||| ||| |||||||| | | |||||||| ||| || ||||||||| ||||    
T  1939341 cataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagtttcactttattttatctttt 1939439  T
Q  324 gctgcagaaataacttatatatgcgcttat 353  Q
    | |  |||||||||||||||||||||||||    
T  1939440 gttatagaaataacttatatatgcgcttat 1939469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 7043496 - 7043549
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaa 196  Q
    |||| |||| ||||||||||||||||| ||||| || |||||||||||||||||    
T  7043496 attggcttgcttgagcttatctaatgagataaatacctgtgagactgcttggaa 7043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 43529777 - 43529890
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgt 234  Q
    |||||| |||||||| |||||||||||||| ||  |||| ||||| ||| |||| |||| | || || || |||||| ||| | || ||||||||||| |    
T  43529777 tgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagctat 43529876  T
Q  235 tttcagtttatttt 248  Q
    ||||||||||||||    
T  43529877 tttcagtttatttt 43529890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 29430893 - 29430837
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    |||||||||||||| ||||||||||||||||| ||||  |||||| ||||| |||||    
T  29430893 tttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaa 29430837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 33192345 - 33192234
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcagt 241  Q
    |||| ||| |||||||||||||  |||||||||||||  |||||||| || ||| ||||| || |||||||||| ||||  | ||||||||||||||||     
T  33192345 attggcttatttgagcttatctgctgacataaacactcatgagactg-tttgaagaacttatgaaaacagtttatgacatatccataagctgttttcagc 33192247  T
Q  242 ttatttttgtaag 254  Q
    |||| ||| ||||    
T  33192246 ttatatttataag 33192234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 3423827 - 3423894
Alignment:
Q  275 aagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    ||||| ||||||| |||| |||||||||||| || ||||||||| ||||| | || ||||||||||||    
T  3423827 aagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 3423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 16551758 - 16551809
Alignment:
Q  136 tgtttggattgacttgtttga-gcttatctaatgacataaacacttgtgaga 186  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||| ||||    
T  16551758 tgtttggattgacttgttttaagcttatctattgacataaacacttgcgaga 16551809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 25609950 - 25609887
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaa 196  Q
    ||||| ||| |||| ||| |||||||||||||| | ||||||  ||||||||||||||||||||    
T  25609950 gcttgcttgcattggcttatttgagcttatctactaacataagaacttgtgagactgcttggaa 25609887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 26143561 - 26143600
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaa 175  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  26143561 tgtttggattggcttgtttgagcttatctactgacataaa 26143600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 40158867 - 40158764
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttt 236  Q
    ||||||||| ||| ||||||| |||||| ||||||||  ||||||||||||| ||||   ||||| || |||||| ||| |||| ||| ||||| |||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttt 40158768  T
Q  237 tcag 240  Q
    ||||    
T  40158767 tcag 40158764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 27288741 - 27288703
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttg 181  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  27288741 attgacttatttgagcttatcaaatgacataaacacttg 27288703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 30331906 - 30331864
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||    
T  30331906 ggcttgtttggattgacttatttcagcttatctactgacataa 30331864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 787486 - 787373
Alignment:
Q  133 gcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagc 231  Q
    ||||||||||||||  || || |||| |||||| || ||||| ||||||||| |||| |||  | ||||| || |||||| ||| |||| || |||||||    
T  787486 gcttgtttggattggattattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagc 787387  T
Q  232 tgttttcagtttat 245  Q
    ||||||||| ||||    
T  787386 tgttttcagcttat 787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 7035336 - 7035389
Alignment:
Q  143 attgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaa 196  Q
    |||| ||| |||||||||||||||||| ||||| ||||||| ||||| ||||||    
T  7035336 attggcttatttgagcttatctaatgagataaatacttgtgcgactgtttggaa 7035389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 9395190 - 9395093
Alignment:
Q  226 ataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||||||||||||| |||||||  |||| | | ||  ||| | ||||||| |||||||||| |||| |||||| |||||| | ||||||||| ||||    
T  9395190 ataagctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaacaatttagctttattttatctttt 9395093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 18525160 - 18525209
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    |||||| |||||||| ||||||||||||||  |||||||||||| |||||    
T  18525160 tgtttgaattgacttatttgagcttatctacagacataaacactcgtgag 18525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 21280273 - 21280322
Alignment:
Q  137 gtttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||||||||||||||||| |||||||| | | ||||||||||| ||||    
T  21280273 gtttggattgacttgtttgaacttatctactcatataaacacttgggaga 21280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 12037946 - 12037910
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  12037946 tttgagcttatctaatgacataagcacttgtaagact 12037910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 18234553 - 18234521
Alignment:
Q  152 tttgagcttatctaatgacataaacacttgtga 184  Q
    |||||||||||||||| ||||||||||||||||    
T  18234553 tttgagcttatctaataacataaacacttgtga 18234521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 40400819 - 40400891
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    ||||||||||| ||| ||| ||| |||||| ||||||||| |||||||| | || ||| |||||||| |||||    
T  40400819 tgtttggattggcttatttaagcctatctactgacataaagacttgtgacattgtttgaaaaaacttatgaaa 40400891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 7714393 - 7714331
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaa 198  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  7714393 tgtttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttggaaaa 7714331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 10114551 - 10114434
Alignment:
Q  224 tcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||| ||||||||||| |||||||  || ||| ||||||||||| ||||||| |||||||||||||||   |||| |||| || |||||||||| ||||    
T  10114551 tcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaattcaa-cttattttatctttt 10114453  T
Q  324 gctgcagaaataacttata 342  Q
    |||  ||||||| ||||||    
T  10114452 gctatagaaatagcttata 10114434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 317
Target Start/End: Complemental strand, 9700152 - 9699970
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa-cagtttacgacacgttcataagctgt 234  Q
    |||||||||| |||| |||||||||||||| |  |||||||||||||||||||  |||  | | ||| ||||| || |||| |||| || ||||||||||    
T  9700152 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgt 9700053  T
Q  235 tttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttatttta 317  Q
    |||||  |||||||  |||| | ||    ||| || |||||| |||||||||  |||| |||||| ||||| |||||||||||    
T  9700052 tttcaccttattttcataagctctcttgaataacatatgaaaacagcttataatttatttgaaaacaatttgaccttatttta 9699970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 4560652 - 4560587
Alignment:
Q  137 gtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt 202  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||||  || |||||| |||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaactt 4560587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 1112859 - 1112815
Alignment:
Q  280 gcttatagcttatgtgaaaataatttaaccttattttattttttg 324  Q
    |||||||||||||||||||| |||||||||||||||||| |||||    
T  1112859 gcttatagcttatgtgaaaacaatttaaccttattttatcttttg 1112815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 2482927 - 2482859
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttat 292  Q
    ||||||||||||||||||| |||||| | |||||| ||||| |||||  |||||| |||||||||||||||    
T  2482927 gttcataagctgttttcagcttatttctataagttatccaagatagc--atgaaaacagcttatagcttat 2482859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 11059638 - 11059701
Alignment:
Q  126 acttgaggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||| |||||| |||||||| | ||||||||||||||||||||| ||||| | ||||||    
T  11059638 acttgaggcctgtttgaattgacttatgtgagcttatctaatgacataagcacttataagactg 11059701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 18331870 - 18331815
Alignment:
Q  131 aggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||||||||||||||||| ||||| |||||||| | |||||| |||||||||||    
T  18331870 aggcttgtttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 2606204 - 2606142
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||||||||| || ||||||||||| |||||||| |||| |||| |||| ||||    
T  2606204 ggcttgtttggattgacttattcgagcttatctactgacataatcactagtgaaactgtttgg 2606142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 24558968 - 24558831
Alignment:
Q  170 cataaacacttgtgagactgcttggaaaaacttttgaaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagca 269  Q
    |||||||||||||||||||| |||| | ||| | ||||| |||||| |||||||||||||||| | ||||  ||||||   | |  | ||||| |||||     
T  24558968 cataaacacttgtgagactgtttgggagaacctatgaaa-agtttatgacacgttcataagctatgttcaacttatttacattaagtctccaagatagct 24558870  T
Q  270 aatgaaagcagcttatagcttatgtgaaaataatttaac 308  Q
     |||||| || ||||||||||||  ||||||||||||||    
T  24558869 tatgaaaacaacttatagcttatacgaaaataatttaac 24558831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 2699304 - 2699247
Alignment:
Q  288 cttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttatatat 345  Q
    ||||| |||||||| |||||| ||||||||| ||||| || |||||||||||||||||    
T  2699304 cttatatgaaaatagtttaactttattttatattttgttgtagaaataacttatatat 2699247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 6496811 - 6496868
Alignment:
Q  137 gtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||||||||||| ||||||| | |||||| |||||||| ||||| ||||    
T  6496811 gtttggattgacttgtttgagtttatctactaacataatcacttgtgtgactgtttgg 6496868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 8060820 - 8060775
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacactt 180  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||    
T  8060820 ttgtttggattgacttatttgagcatatctattgacataaacactt 8060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 14926897 - 14926954
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||||||| ||||| ||||| || || ||||| ||||||||||||||    
T  14926897 ggcttgtttggattgacttatttgaacttatttactggcataagcacttgtgagactg 14926954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 41442443 - 41442524
Alignment:
Q  206 aaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatag 287  Q
    ||||| |||| |||| ||||||| ||||||||||| |||  | | ||||||||||||||||||  |||||| ||||||||||    
T  41442443 aaacaatttatgacatgttcatatgctgttttcagcttacctatataagttttccaatatagcttatgaaaacagcttatag 41442524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 43043819 - 43043770
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    |||||||||||||||||||||||||||| | || ||||| ||||||||||    
T  43043819 tgtttggattgacttgtttgagcttatcaactggcataagcacttgtgag 43043770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 1561426 - 1561378
Alignment:
Q  138 tttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||||||| || ||||| ||||||||||| |||||||||||||||||    
T  1561426 tttggattgatttatttgatcttatctaatggcataaacacttgtgaga 1561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 2487927 - 2487999
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    ||||||||||| ||| |||||| | ||||| |||||||| |||||||||||||| |||| | ||||| |||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaa 2487999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 16162911 - 16162839
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 208  Q
    ||||||||||| ||| |||||| ||||||| |  |||||||||||||||||||| |||  ||||||| |||||    
T  16162911 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaa 16162839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 10438034 - 10437983
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    ||||||||||||||| ||||| |||||| |||| ||||| ||||||||||||    
T  10438034 tgtttggattgacttatttgaacttatccaatggcataatcacttgtgagac 10437983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 21653150 - 21653043
Alignment:
Q  217 gacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttatttt 316  Q
    |||||||||||||||| ||||||| |||||||  |||| | ||||| ||||| ||||||||||  || |||| ||   ||||  |||||||| |||||||    
T  21653150 gacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaactttatttt 21653051  T
Q  317 attttttg 324  Q
    || |||||    
T  21653050 atcttttg 21653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 29262925 - 29262976
Alignment:
Q  267 gcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttat 318  Q
    |||||||||| ||||||| ||||||| |||||||||||| || |||||||||    
T  29262925 gcaaatgaaatcagcttacagcttatatgaaaataatttgactttattttat 29262976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 39881646 - 39881745
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttcag 240  Q
    ||||||||| ||||| |||||||| || ||||||||||||||||| || |||||| | ||| || ||| || ||| |||| |||||||| | ||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgttcataaacagttttcag 39881745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 41596044 - 41596001
Alignment:
Q  223 ttcataagctgttttcagtttatttttgtaagttttccaatata 266  Q
    |||||||||| |||||| |||||||||||||||||| |||||||    
T  41596044 ttcataagcttttttcaatttatttttgtaagtttttcaatata 41596001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 2091914 - 2091864
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||||||||| || ||||| |||||| |||| |||||||||||||||||    
T  2091914 tgtttggattgatttatttgatcttatccaatggcataaacacttgtgaga 2091864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 10488615 - 10488561
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||||||| ||| |||||||||||| | | |||||||||| ||||||||||    
T  10488615 ttgtttggattggcttatttgagcttatcaactaacataaacacatgtgagactg 10488561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 10560194 - 10560148
Alignment:
Q  140 tggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    |||||||||||  ||||||||||||| ||||||||||| ||||||||    
T  10560194 tggattgacttagttgagcttatctactgacataaacatttgtgaga 10560148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 38602478 - 38602440
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataa 174  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  38602478 tgtttggattgacttatttgagcttatctactgacataa 38602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 3112278 - 3112225
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgag 185  Q
    ||||||||||||||||||| | | ||||||| || |||||||| ||||||||||    
T  3112278 ggcttgtttggattgacttatgtaagcttatttattgacataagcacttgtgag 3112225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 4558806 - 4558761
Alignment:
Q  278 cagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    ||||||||||| ||| ||||||||||||||| ||||||||| ||||    
T  4558806 cagcttatagcatatatgaaaataatttaactttattttatctttt 4558761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 6525626 - 6525667
Alignment:
Q  222 gttcataagctgttttcagtttatttttgtaagttttccaat 263  Q
    ||||||||||||||||||  |||||||| |||||||||||||    
T  6525626 gttcataagctgttttcaacttatttttataagttttccaat 6525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 43368619 - 43368672
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||||||| ||||| |||||||| | |||||| || |||||||||||    
T  43368619 tgtttggattgacttatttgatcttatctactaacataagcatttgtgagactg 43368672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 1117462 - 1117406
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||||||||||||  |||| ||||| || |  |||||||||||||||||||    
T  1117462 ggcttgtttggattgacttacttgaacttatatactagcataaacacttgtgagact 1117406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 1470911 - 1470963
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttatttttt 323  Q
    |||||| ||||||||||||||| ||||| |||||| || ||||||||| ||||    
T  1470911 atgaaaacagcttatagcttatatgaaagtaatttgactttattttatctttt 1470963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 3092543 - 3092591
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||||||||| ||||||||||| || ||||  ||||||||||||    
T  3092543 tgtttggattgacttatttgagcttatttattgacgcaaacacttgtga 3092591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 10120818 - 10120750
Alignment:
Q  224 tcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttat 292  Q
    ||||| ||||||||||| |||||||  |||||| ||||||||||  |||| || |||||||||| ||||    
T  10120818 tcatatgctgttttcagcttattttcataagttctccaatatagttaatgtaaacagcttataggttat 10120750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 12851329 - 12851214
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtg--agactgcttggaaaaacttttg-aaacagtttacgacacgttcataagct 232  Q
    ||||||||||| ||| | ||| |||| ||| || ||||||||||||||  |||||| |||| ||||||| || |||||| |||  ||| ||||||||| |    
T  12851329 tgtttggattggcttatctgaacttacctattggcataaacacttgtgatagactgtttgggaaaacttatgaaaacagcttataacatgttcataagat 12851230  T
Q  233 gttttcagtttatttt 248  Q
    |||||| | |||||||    
T  12851229 gttttcggcttatttt 12851214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 22505694 - 22505654
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaa 175  Q
    |||||| ||||||||| |||||||||||||| |||||||||    
T  22505694 ttgtttagattgacttatttgagcttatctattgacataaa 22505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 34291014 - 34290974
Alignment:
Q  142 gattgacttgtttgagcttatctaatgacataaacacttgt 182  Q
    |||||||||||||||| | ||||| ||||||||||||||||    
T  34291014 gattgacttgtttgagttcatctactgacataaacacttgt 34290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 35374428 - 35374492
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaata 335  Q
    |||||| ||| ||||||||||| |||||| |||||||| ||||||||| ||| |||  |||||||    
T  35374428 atgaaatcagattatagcttatatgaaaacaatttaactttattttatctttcgctatagaaata 35374492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 37353091 - 37353151
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaa 196  Q
    ||||||||| ||||| | ||| | |||||| |||||||| |||||||||||||| ||||||    
T  37353091 tgtttggatcgacttatctgaacctatctactgacataagcacttgtgagactgtttggaa 37353151  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 324
Target Start/End: Complemental strand, 2735225 - 2735031
Alignment:
Q  132 ggcttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa-cagtttacgacacgtt-cataa 229  Q
    ||||||| |||||||  |||||||||||| |||| || ||||||||  |||||||||| |||  | ||||| ||||| | | ||| ||||  || |||||    
T  2735225 ggcttgtctggattggtttgtttgagcttgtctagtggcataaacatctgtgagactgtttgagataacttatgaaaacggcttatgacatttttcataa 2735126  T
Q  230 gctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttg 324  Q
    ||||||||| | |||||||  |||||| | ||| || ||  |||||| |||||||||| ||||   ||||||||||||| ||||||||| |||||    
T  2735125 gctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattatacaaaaataatttaactttattttatcttttg 2735031  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 8420115 - 8420169
Alignment:
Q  136 tgtttggattgacttg-tttgagcttatctaatgacataaacacttgtgagactg 189  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  8420115 tgtttggattgactttatttgagcttatctattgacataaacacttgtgagactg 8420169  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 2727802 - 2727855
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactg 189  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||    
T  2727802 tgtttggattggcttgtttgagcttatctaatcgcataaacacttgtgacactg 2727855  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 341
Target Start/End: Original strand, 9093566 - 9093681
Alignment:
Q  226 ataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgc 325  Q
    |||| |||||||||| |||||||  |||||| || || | |||  |||||| |||||||||||||||  ||||| |||||||| ||||||||| |||||     
T  9093566 ataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttga 9093665  T
Q  326 tgcagaaataacttat 341  Q
    |  ||||||| |||||    
T  9093666 tatagaaatagcttat 9093681  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 13908392 - 13908343
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||| |||||||| ||||| |||||||| ||||||||||||||||||    
T  13908392 ttgtttgaattgacttatttgaacttatctactgacataaacacttgtga 13908343  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 31624170 - 31624085
Alignment:
Q  206 aaacagtttacgacacgttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaagcagcttatagctta 291  Q
    |||||| ||| |||| ||||||||||||||||||  |||||||  ||| || ||||| |||||  |||||| ||||||||||||||    
T  31624170 aaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 31776191 - 31776239
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||||||||| |||||||||||||| ||| ||| ||||||||||    
T  31776191 tgtttggattgacttatttgagcttatctactgatatatacacttgtga 31776239  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 769272 - 769185
Alignment:
Q  153 ttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttg-aaacagtttacgacacgttcataagctgttttca 239  Q
    |||||| |||||| ||  ||||||||||||||||||| |||||  ||||| || |||||  ||| |||| ||||||||||||||||||    
T  769272 ttgagcatatctattggtataaacacttgtgagactgtttggatgaacttatgaaaacatcttatgacatgttcataagctgttttca 769185  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 8010508 - 8010457
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    ||||||||||||||| | |||||||||||| || |||||||| |||||||||    
T  8010508 tgtttggattgacttatgtgagcttatctattggcataaacatttgtgagac 8010457  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 27693490 - 27693541
Alignment:
Q  267 gcaaatgaaagcagcttatagcttatgtgaaaataatttaaccttattttat 318  Q
    |||||||||| ||||||| ||||||| |||||||||||| || |||||||||    
T  27693490 gcaaatgaaatcagcttacagcttatatgaaaataatttgactttattttat 27693541  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 29274284 - 29274355
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||| ||| ||||||||||| |||||| ||||| || ||||||||| |||||||  ||||||| ||||||    
T  29274284 atgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttata 29274355  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 17241082 - 17241144
Alignment:
Q  139 ttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttggaaaaact 201  Q
    ||||||| |||| |||||| |||| || |||||||||||||||||| |||| |||| ||||||    
T  17241082 ttggatttacttatttgagtttatatactgacataaacacttgtgacactgattgggaaaact 17241144  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 738461 - 738510
Alignment:
Q  137 gtttggattgacttgtttgagcttatctaatgacataaacacttgtgaga 186  Q
    ||||||||| |||| |||||||||||||| ||| ||||||| ||||||||    
T  738461 gtttggattaacttatttgagcttatctattgagataaacatttgtgaga 738510  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 2732169 - 2732228
Alignment:
Q  141 ggattgacttgtttgag--cttatctaatgacataaacacttgtgagactgcttggaaaa 198  Q
    |||||||||| ||||||  ||| |||| |||||||| |||||||||||||| ||||||||    
T  2732169 ggattgacttatttgagagcttgtctactgacataagcacttgtgagactgtttggaaaa 2732228  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 4325224 - 4325276
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    ||||||||||||||  ||| || ||||||| | ||||||||||||||||||||    
T  4325224 tgtttggattgactaattttagtttatctactaacataaacacttgtgagact 4325276  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 10016774 - 10016722
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagact 188  Q
    |||||||||||  || ||||||||||||||  | |||||||||||||||||||    
T  10016774 tgtttggattggtttatttgagcttatctacaggcataaacacttgtgagact 10016722  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 10616714 - 10616746
Alignment:
Q  217 gacacgttcataagctgttttcagtttattttt 249  Q
    |||| ||||||||||||||||||||||||||||    
T  10616714 gacatgttcataagctgttttcagtttattttt 10616746  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 10728624 - 10728576
Alignment:
Q  294 tgaaaataatttaaccttattttattttttgctgcagaaataacttata 342  Q
    |||||| |||||||| ||||||||| |||||||  ||||||||||||||    
T  10728624 tgaaaacaatttaactttattttatcttttgctttagaaataacttata 10728576  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 31324471 - 31324427
Alignment:
Q  271 atgaaagcagcttatagcttatgtgaaaataatttaaccttattt 315  Q
    ||||| |||||||||||||||  |||||||| |||||||||||||    
T  31324471 atgaatgcagcttatagcttacatgaaaatagtttaaccttattt 31324427  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 35070384 - 35070444
Alignment:
Q  134 cttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagactgcttgg 194  Q
    ||||||||||||  ||| |||||||||||||| | |||||| |||||||| ||||| ||||    
T  35070384 cttgtttggattttcttatttgagcttatctactaacataagcacttgtgggactgtttgg 35070444  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 51984 - 52039
Alignment:
Q  250 gtaagttttccaatatagcaaatgaaagcagcttatagcttatgtgaaaataattt 305  Q
    ||||||||||||| ||| | ||||||| ||||||||||||||| |||||| |||||    
T  51984 gtaagttttccaagataactaatgaaaacagcttatagcttatatgaaaacaattt 52039  T

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Target: scaffold0459 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 6698 - 6646
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    |||||||||||||||| ||||||||||| || ||  |||| ||||||||||||    
T  6698 ttgtttggattgacttatttgagcttatatattggtataatcacttgtgagac 6646  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 6696 - 6644
Alignment:
Q  135 ttgtttggattgacttgtttgagcttatctaatgacataaacacttgtgagac 187  Q
    |||||||||||||||| ||||||||||| || ||  |||| ||||||||||||    
T  6696 ttgtttggattgacttatttgagcttatatattggtataatcacttgtgagac 6644  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 159892 - 159940
Alignment:
Q  136 tgtttggattgacttgtttgagcttatctaatgacataaacacttgtga 184  Q
    ||||||||||| ||| |||||||||||||| | | ||||||||||||||    
T  159892 tgtttggattggcttatttgagcttatctactaatataaacacttgtga 159940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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