View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8986_high_37 (Length: 298)
Name: NF8986_high_37
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8986_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 39746924 - 39747133
Alignment:
| Q |
18 |
ctatagtagcacatagtttccaaagaactccaattgccgttaagttttgttcaaactgcaatatatttatttatttttctcttcggttaggccacaagtt |
117 |
Q |
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| T |
39746924 |
ctatagtagcacatagtttccaaagaactccaattgccgttaaattttgttcaaactactatatatttatttatttttctcttcggttaggccacaagtt |
39747023 |
T |
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| Q |
118 |
ctgaggaccacatcctataaagaaatataatgctctgaaactatgagaagtcacatttatcattgaaggtattgtaaattttacaaggatcattgaaggt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
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| T |
39747024 |
ctgaggaccacatcctataaagaaatataatgctctgaaactatgagaagtcacattaagcattgaaggtattgtaaattttacaaggatcattgaaggt |
39747123 |
T |
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| Q |
218 |
attataaatt |
227 |
Q |
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||| |||||| |
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| T |
39747124 |
attctaaatt |
39747133 |
T |
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