View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8986_high_62 (Length: 202)

Name: NF8986_high_62
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8986_high_62
NF8986_high_62
[»] chr7 (50 HSPs)
chr7 (17-202)||(17171839-17172024)
chr7 (17-202)||(40787930-40788115)
chr7 (17-202)||(44301022-44301207)
chr7 (17-202)||(12499186-12499372)
chr7 (17-191)||(16567874-16568049)
chr7 (17-191)||(16597613-16597788)
chr7 (17-191)||(46181520-46181695)
chr7 (18-191)||(5022822-5022996)
chr7 (5-202)||(36073659-36073857)
chr7 (17-202)||(9223979-9224165)
chr7 (6-191)||(27398896-27399082)
chr7 (17-202)||(48558264-48558449)
chr7 (17-202)||(3551173-3551351)
chr7 (32-202)||(16562248-16562419)
chr7 (32-202)||(16603243-16603414)
chr7 (17-202)||(26299729-26299915)
chr7 (17-190)||(35092371-35092543)
chr7 (17-191)||(39414872-39415047)
chr7 (17-191)||(19805334-19805508)
chr7 (12-187)||(46783379-46783555)
chr7 (17-191)||(12920630-12920805)
chr7 (7-202)||(7377943-7378137)
chr7 (17-191)||(31455207-31455374)
chr7 (6-202)||(34151964-34152161)
chr7 (6-202)||(34174963-34175160)
chr7 (17-191)||(10065889-10066064)
chr7 (17-199)||(33979174-33979357)
chr7 (17-191)||(3363268-3363443)
chr7 (5-165)||(36073052-36073213)
chr7 (17-190)||(30391905-30392079)
chr7 (18-167)||(45116196-45116346)
chr7 (6-202)||(2960231-2960416)
chr7 (18-202)||(25309150-25309333)
chr7 (20-190)||(33067117-33067288)
chr7 (5-188)||(40855521-40855704)
chr7 (91-202)||(43224614-43224726)
chr7 (12-188)||(1875551-1875732)
chr7 (134-202)||(9354874-9354942)
chr7 (126-202)||(28066949-28067025)
chr7 (126-202)||(21153524-21153602)
chr7 (30-188)||(40341848-40342007)
chr7 (112-202)||(38469589-38469679)
chr7 (90-191)||(42284812-42284914)
chr7 (18-150)||(16278855-16278988)
chr7 (20-191)||(43702045-43702223)
chr7 (51-165)||(5923417-5923532)
chr7 (17-190)||(24429954-24430127)
chr7 (155-195)||(11244288-11244328)
chr7 (79-150)||(25047270-25047341)
chr7 (134-202)||(38400731-38400799)
[»] chr6 (21 HSPs)
chr6 (17-202)||(24446740-24446925)
chr6 (17-202)||(1221333-1221514)
chr6 (17-202)||(33959769-33959954)
chr6 (17-191)||(33331908-33332083)
chr6 (17-167)||(1329196-1329347)
chr6 (17-191)||(33328896-33329071)
chr6 (6-191)||(20691204-20691390)
chr6 (17-185)||(31071095-31071264)
chr6 (17-202)||(6337483-6337668)
chr6 (17-191)||(13532568-13532743)
chr6 (31-202)||(10545432-10545605)
chr6 (17-177)||(9061730-9061891)
chr6 (115-202)||(6799114-6799201)
chr6 (19-129)||(31783639-31783749)
chr6 (17-142)||(28770141-28770265)
chr6 (14-202)||(10499460-10499649)
chr6 (17-126)||(29640396-29640506)
chr6 (40-188)||(6336884-6337032)
chr6 (20-202)||(7808052-7808235)
chr6 (17-126)||(31510566-31510676)
chr6 (137-189)||(31538540-31538592)
[»] chr5 (40 HSPs)
chr5 (17-202)||(6277432-6277617)
chr5 (17-202)||(41692087-41692272)
chr5 (17-202)||(34718403-34718588)
chr5 (17-202)||(19254067-19254252)
chr5 (17-202)||(25694297-25694481)
chr5 (5-202)||(38310080-38310277)
chr5 (17-202)||(10937727-10937911)
chr5 (17-191)||(14088569-14088744)
chr5 (17-191)||(14645617-14645792)
chr5 (20-202)||(14087953-14088136)
chr5 (20-190)||(7978333-7978504)
chr5 (17-191)||(15718829-15718998)
chr5 (11-202)||(30775147-30775339)
chr5 (5-150)||(15673495-15673641)
chr5 (17-191)||(41616885-41617052)
chr5 (20-197)||(29456086-29456263)
chr5 (111-195)||(19549706-19549790)
chr5 (24-202)||(42031237-42031416)
chr5 (30-202)||(5657257-5657429)
chr5 (126-202)||(14645991-14646067)
chr5 (20-202)||(31149337-31149520)
chr5 (18-177)||(35853883-35854043)
chr5 (28-202)||(36470144-36470318)
chr5 (24-197)||(4572563-4572737)
chr5 (5-150)||(33346576-33346723)
chr5 (81-202)||(23137888-23138010)
chr5 (134-202)||(639052-639120)
chr5 (90-202)||(6224552-6224663)
chr5 (5-188)||(35935727-35935912)
chr5 (122-198)||(14832483-14832559)
chr5 (126-202)||(16187118-16187194)
chr5 (20-202)||(22631881-22632064)
chr5 (76-167)||(3049395-3049486)
chr5 (30-202)||(6311263-6311434)
chr5 (17-188)||(1061264-1061436)
chr5 (17-202)||(25828058-25828242)
chr5 (91-190)||(18595662-18595762)
chr5 (122-165)||(4898458-4898501)
chr5 (5-62)||(4898379-4898436)
chr5 (113-197)||(24488821-24488905)
[»] chr4 (71 HSPs)
chr4 (17-202)||(53140923-53141108)
chr4 (11-202)||(46081031-46081221)
chr4 (17-202)||(33733688-33733872)
chr4 (19-202)||(22248173-22248356)
chr4 (17-202)||(29405492-29405677)
chr4 (17-202)||(45097875-45098058)
chr4 (57-202)||(52801918-52802063)
chr4 (17-191)||(29148641-29148816)
chr4 (17-191)||(32655144-32655319)
chr4 (17-191)||(42052892-42053067)
chr4 (17-116)||(52801837-52801936)
chr4 (18-202)||(24486945-24487129)
chr4 (17-191)||(52180399-52180574)
chr4 (5-202)||(9930819-9931017)
chr4 (17-202)||(28233749-28233934)
chr4 (14-191)||(14577097-14577276)
chr4 (17-187)||(21076140-21076311)
chr4 (17-191)||(38000906-38001081)
chr4 (17-191)||(42755651-42755826)
chr4 (17-191)||(3094602-3094777)
chr4 (17-191)||(23147715-23147890)
chr4 (5-188)||(31713167-31713351)
chr4 (20-202)||(34459259-34459442)
chr4 (17-202)||(39804619-39804793)
chr4 (18-188)||(22830164-22830335)
chr4 (14-167)||(12186108-12186261)
chr4 (18-202)||(21246138-21246323)
chr4 (17-191)||(52595855-52596030)
chr4 (18-191)||(41003633-41003807)
chr4 (17-202)||(1757660-1757841)
chr4 (18-202)||(12518400-12518584)
chr4 (17-191)||(652545-652720)
chr4 (17-188)||(11035006-11035178)
chr4 (18-191)||(25938675-25938841)
chr4 (32-202)||(41781000-41781171)
chr4 (79-202)||(52014160-52014283)
chr4 (14-167)||(2720857-2721010)
chr4 (30-195)||(9609334-9609500)
chr4 (14-167)||(12188102-12188255)
chr4 (12-188)||(22306310-22306487)
chr4 (17-191)||(2224588-2224757)
chr4 (17-191)||(8066268-8066442)
chr4 (122-202)||(14595628-14595708)
chr4 (126-202)||(26339915-26339991)
chr4 (17-191)||(54932370-54932545)
chr4 (17-129)||(54978783-54978894)
chr4 (91-202)||(22313055-22313167)
chr4 (17-199)||(51806472-51806655)
chr4 (17-75)||(3386851-3386909)
chr4 (76-202)||(21297052-21297180)
chr4 (90-202)||(33983436-33983549)
chr4 (6-196)||(1730666-1730856)
chr4 (76-192)||(7117641-7117757)
chr4 (31-150)||(23349156-23349276)
chr4 (122-202)||(44810029-44810109)
chr4 (19-202)||(46030503-46030684)
chr4 (90-202)||(2073324-2073437)
chr4 (110-191)||(8805594-8805675)
chr4 (20-167)||(28928248-28928396)
chr4 (134-202)||(56444828-56444896)
chr4 (90-167)||(7250296-7250374)
chr4 (81-202)||(8614839-8614960)
chr4 (17-121)||(26337236-26337341)
chr4 (121-202)||(44292736-44292817)
chr4 (91-167)||(38444213-38444288)
chr4 (115-202)||(8643961-8644048)
chr4 (122-165)||(13082511-13082554)
chr4 (122-188)||(7262440-7262506)
chr4 (155-197)||(27586329-27586371)
chr4 (76-150)||(50981290-50981364)
chr4 (5-69)||(8589440-8589504)
[»] chr1 (66 HSPs)
chr1 (17-202)||(4892913-4893098)
chr1 (17-202)||(29185389-29185574)
chr1 (17-202)||(33362516-33362701)
chr1 (17-202)||(20415270-20415454)
chr1 (17-202)||(30489950-30490135)
chr1 (6-202)||(14106602-14106799)
chr1 (30-202)||(3191730-3191903)
chr1 (30-202)||(3200548-3200721)
chr1 (30-202)||(3209385-3209558)
chr1 (6-202)||(28192063-28192260)
chr1 (17-191)||(9222543-9222718)
chr1 (17-191)||(13313035-13313210)
chr1 (17-191)||(42068759-42068933)
chr1 (17-202)||(35738590-35738776)
chr1 (5-188)||(40093885-40094069)
chr1 (17-202)||(32133808-32133994)
chr1 (17-202)||(46772037-46772223)
chr1 (17-202)||(236804-236990)
chr1 (17-191)||(44327564-44327739)
chr1 (20-197)||(19506678-19506855)
chr1 (14-167)||(27783825-27783978)
chr1 (17-191)||(29054237-29054412)
chr1 (17-202)||(7815191-7815375)
chr1 (17-191)||(25814965-25815132)
chr1 (14-202)||(47665683-47665872)
chr1 (5-188)||(29425815-29425999)
chr1 (17-191)||(35978141-35978316)
chr1 (20-202)||(2978706-2978889)
chr1 (21-195)||(9473303-9473477)
chr1 (18-199)||(4051914-4052100)
chr1 (20-191)||(28221267-28221439)
chr1 (17-167)||(43634169-43634320)
chr1 (17-176)||(48663086-48663246)
chr1 (17-191)||(48964006-48964175)
chr1 (14-202)||(945769-945958)
chr1 (17-202)||(2433501-2433686)
chr1 (19-191)||(33794048-33794214)
chr1 (122-200)||(16176736-16176814)
chr1 (17-194)||(34321336-34321516)
chr1 (17-202)||(48514773-48514958)
chr1 (20-185)||(32835147-32835313)
chr1 (20-185)||(38491727-38491893)
chr1 (18-167)||(611045-611195)
chr1 (112-202)||(22579873-22579963)
chr1 (106-188)||(31645908-31645990)
chr1 (15-202)||(25059390-25059578)
chr1 (79-189)||(8981263-8981373)
chr1 (76-202)||(48985483-48985609)
chr1 (5-165)||(19494724-19494884)
chr1 (18-129)||(424931-425042)
chr1 (110-202)||(10786490-10786582)
chr1 (17-147)||(39027116-39027247)
chr1 (115-202)||(40045176-40045263)
chr1 (25-174)||(35949148-35949297)
chr1 (98-202)||(13796787-13796890)
chr1 (31-129)||(19996327-19996425)
chr1 (140-202)||(31107410-31107472)
chr1 (91-202)||(21260456-21260566)
chr1 (114-202)||(2465310-2465398)
chr1 (91-202)||(2974953-2975065)
chr1 (134-197)||(3821035-3821098)
chr1 (93-191)||(12560324-12560423)
chr1 (39-177)||(50100172-50100311)
chr1 (117-202)||(29511954-29512040)
chr1 (140-202)||(32888502-32888564)
chr1 (91-167)||(7842879-7842956)
[»] scaffold0230 (1 HSPs)
scaffold0230 (17-202)||(26938-27123)
[»] chr3 (53 HSPs)
chr3 (17-202)||(42096368-42096552)
chr3 (5-202)||(30247668-30247864)
chr3 (17-202)||(45078831-45079015)
chr3 (17-202)||(41409883-41410068)
chr3 (6-202)||(32995570-32995767)
chr3 (14-191)||(19618982-19619160)
chr3 (17-202)||(10084845-10085031)
chr3 (5-202)||(9162542-9162740)
chr3 (17-202)||(10191765-10191951)
chr3 (5-202)||(28956456-28956654)
chr3 (17-191)||(24987043-24987218)
chr3 (18-202)||(36678693-36678878)
chr3 (14-191)||(50480702-50480881)
chr3 (17-191)||(39352756-39352931)
chr3 (17-191)||(44792274-44792449)
chr3 (17-191)||(41924266-41924441)
chr3 (17-191)||(49360251-49360423)
chr3 (32-202)||(38694442-38694613)
chr3 (14-202)||(11672015-11672204)
chr3 (6-202)||(26291353-26291551)
chr3 (115-202)||(2012742-2012829)
chr3 (17-202)||(5908568-5908753)
chr3 (20-202)||(23297967-23298150)
chr3 (89-202)||(14418499-14418612)
chr3 (5-188)||(35688685-35688869)
chr3 (5-200)||(1599777-1599981)
chr3 (17-202)||(46819396-46819581)
chr3 (20-197)||(5040694-5040871)
chr3 (112-202)||(27346909-27346999)
chr3 (12-188)||(19455165-19455342)
chr3 (17-146)||(50809147-50809276)
chr3 (17-146)||(50866586-50866715)
chr3 (17-167)||(13735280-13735430)
chr3 (31-192)||(22844787-22844949)
chr3 (123-202)||(26787259-26787338)
chr3 (20-191)||(25467786-25467958)
chr3 (31-202)||(33119258-33119430)
chr3 (76-202)||(48584348-48584475)
chr3 (81-202)||(35204604-35204719)
chr3 (20-150)||(8340352-8340482)
chr3 (140-202)||(35732568-35732630)
chr3 (126-202)||(30964250-30964326)
chr3 (126-202)||(30980062-30980138)
chr3 (78-202)||(46584851-46584974)
chr3 (155-202)||(6083288-6083334)
chr3 (37-146)||(6408917-6409026)
chr3 (134-202)||(28751883-28751948)
chr3 (91-145)||(39952854-39952908)
chr3 (144-202)||(43657593-43657651)
chr3 (140-198)||(49375134-49375192)
chr3 (17-113)||(35732642-35732739)
chr3 (17-68)||(26787164-26787215)
chr3 (173-202)||(6083094-6083123)
[»] chr8 (25 HSPs)
chr8 (17-202)||(20216510-20216695)
chr8 (17-202)||(20236108-20236293)
chr8 (17-191)||(3616502-3616677)
chr8 (17-191)||(24789814-24789989)
chr8 (17-202)||(15542507-15542692)
chr8 (17-191)||(30801548-30801723)
chr8 (17-191)||(1376489-1376664)
chr8 (25-202)||(37226352-37226529)
chr8 (20-202)||(24891086-24891269)
chr8 (20-197)||(2620598-2620774)
chr8 (37-202)||(38551905-38552071)
chr8 (91-202)||(1667456-1667568)
chr8 (17-202)||(26560869-26561054)
chr8 (109-202)||(7057898-7057994)
chr8 (114-202)||(29527924-29528012)
chr8 (76-183)||(38020526-38020633)
chr8 (76-165)||(7583675-7583764)
chr8 (20-202)||(6109912-6110095)
chr8 (17-75)||(7057987-7058045)
chr8 (81-202)||(25178662-25178783)
chr8 (18-202)||(25419546-25419731)
chr8 (18-202)||(25427886-25428071)
chr8 (112-202)||(43511474-43511564)
chr8 (20-167)||(19643152-19643301)
chr8 (5-62)||(7583767-7583824)
[»] chr2 (38 HSPs)
chr2 (17-202)||(4289939-4290122)
chr2 (17-202)||(10391266-10391450)
chr2 (17-191)||(33867177-33867352)
chr2 (5-202)||(40474822-40475020)
chr2 (17-191)||(25425054-25425229)
chr2 (17-202)||(29155607-29155793)
chr2 (17-202)||(11788949-11789135)
chr2 (17-176)||(4481369-4481529)
chr2 (79-202)||(8754219-8754342)
chr2 (39-202)||(35048959-35049123)
chr2 (76-199)||(39766743-39766866)
chr2 (111-202)||(40507276-40507367)
chr2 (6-191)||(38620689-38620875)
chr2 (6-202)||(8027078-8027275)
chr2 (17-191)||(3329461-3329636)
chr2 (17-202)||(12345133-12345311)
chr2 (17-191)||(30241726-30241895)
chr2 (6-188)||(18975118-18975301)
chr2 (5-202)||(4260723-4260923)
chr2 (12-188)||(29545608-29545785)
chr2 (21-191)||(23232033-23232204)
chr2 (41-191)||(32422398-32422549)
chr2 (17-191)||(31440276-31440443)
chr2 (14-191)||(13142208-13142378)
chr2 (112-202)||(15162291-15162381)
chr2 (6-191)||(17961083-17961261)
chr2 (126-202)||(42969362-42969438)
chr2 (17-191)||(2657147-2657322)
chr2 (90-196)||(16711058-16711164)
chr2 (12-202)||(20937361-20937536)
chr2 (103-191)||(44070130-44070219)
chr2 (20-142)||(667617-667739)
chr2 (143-202)||(35005120-35005179)
chr2 (17-71)||(9205552-9205606)
chr2 (118-202)||(12758045-12758129)
chr2 (144-202)||(4591953-4592011)
chr2 (122-188)||(41935144-41935210)
chr2 (17-75)||(44070085-44070143)
[»] scaffold0011 (1 HSPs)
scaffold0011 (6-195)||(250514-250704)
[»] scaffold0005 (2 HSPs)
scaffold0005 (14-191)||(240099-240278)
scaffold0005 (122-202)||(221670-221750)
[»] scaffold0164 (2 HSPs)
scaffold0164 (17-191)||(6744-6919)
scaffold0164 (17-191)||(14625-14800)
[»] scaffold0472 (1 HSPs)
scaffold0472 (76-197)||(8122-8245)
[»] scaffold0157 (1 HSPs)
scaffold0157 (18-202)||(2327-2511)
[»] scaffold0024 (1 HSPs)
scaffold0024 (112-202)||(109681-109771)
[»] scaffold0938 (1 HSPs)
scaffold0938 (17-202)||(819-1005)
[»] scaffold0062 (2 HSPs)
scaffold0062 (17-202)||(23447-23633)
scaffold0062 (17-202)||(33615-33801)
[»] scaffold0242 (4 HSPs)
scaffold0242 (112-202)||(12754-12844)
scaffold0242 (112-202)||(21589-21679)
scaffold0242 (14-62)||(12667-12715)
scaffold0242 (14-62)||(21502-21550)
[»] scaffold0312 (1 HSPs)
scaffold0312 (18-129)||(5508-5619)
[»] scaffold0056 (1 HSPs)
scaffold0056 (118-197)||(72337-72416)
[»] scaffold0249 (1 HSPs)
scaffold0249 (144-202)||(20379-20437)
[»] scaffold0602 (1 HSPs)
scaffold0602 (115-202)||(5292-5379)


Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 17171839 - 17172024
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  17171839 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 17171938  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17171939 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 17172024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 40787930 - 40788115
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  40787930 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatggacacgggtagggtaattaccagcaaattttaatgggtatggacacgggta 40788029  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40788030 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 40788115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 44301207 - 44301022
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  44301207 caaaaaatacccacaatgggtagggtaaaaccccactttcatgggtatgggcatgggtagggtaattacccgcaaattttaatgggtatggacacgggta 44301108  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||  | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44301107 agggtactatactactcaaccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 44301022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 12499186 - 12499372
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| || ||||||| | |||||| |||||| |||||  ||||| ||||||||||||| ||||||  |||| ||||| |||||||    
T  12499186 caaaaaatacccgctatgggtatggtaaaatcccgctttcatgggtctgggcttgggtatgggtaattacccgcaaatttgtatgggtatgggcacgggt 12499285  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||  ||||||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  12499286 atggacactatactacccagccccgcaacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 12499372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 16568049 - 16567874
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  16568049 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 16567951  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  16567950 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 16567874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 16597613 - 16597788
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  16597613 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 16597711  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  16597712 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 16597788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 46181695 - 46181520
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  46181695 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 46181597  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  46181596 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 46181520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 5022822 - 5022996
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||||||||| ||||||||    
T  5022822 aaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatggatatgggcacgggta 5022920  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || || ||||||| ||| ||| || ||||||||||||| | ||||||  |||||||||||||    
T  5022921 agggtactatactgcccagacccgcaaccccccatatacatatttatataatatcataaattatttatttattttt 5022996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 36073659 - 36073857
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggat 103  Q
    |||||||| || ||||||||||||||||||| |||||||||||| ||| ||| |  ||| ||||  || |  || |||||||||| ||||||  |||| |    
T  36073659 gatggacacccgcaaaaaatacccacaatgggtagggtaaaaccccgcatttgtatgtaagggcttggatccggataattacccgcaaatttatatgggt 36073758  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||   |||||||||| ||||||||||| ||||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  36073759 atgggtgcgggtaagggcactatactacccagccccgcaacccgcatatacatatttaaataatataataaatattttatttatttttggtgtacaatt 36073857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 9224165 - 9223979
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| || | |||| |||||||||||| |||||||||||||  ||||  ||||| || |||||||||| ||||||  |||| ||||| ||||| |    
T  9224165 caaaaaatatccgctatgggtagggtaaaaccccgcttttatgggttcgggcttgggtatggataattacccgcaaatttatatgggtatgggcacggat 9224066  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| |||||||||||||||||  || |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  9224065 atgggcactgtactacccagccccgcaacccgcataaatgtatttatataatattataaataatttatttatttttggtgtacaatt 9223979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 27399082 - 27398896
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatat 105  Q
    ||||| |||| ||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||| || ||  | ||||| |||| || ||||| |||    
T  27399082 atggatatccgcaaaaaatacccacagtgggtagggtaaaaccccgcttttatgggtctgggcacggatacggataatacccataaaattaaatgggtat 27398983  T
Q  106 ggacacgggtaagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    || ||||||||||||||||||||| || || |||| | |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  27398982 gggcacgggtaagggtactatactgcccagacccgtagacccgcatatacatatttatataatatcataaattatttatttattttt 27398896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 48558264 - 48558449
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| || | ||||||||| ||||||| ||||||  |||||| ||||| ||||| ||||||||||||| |||||| ||||| ||| | ||||||     
T  48558264 caaaaaatatccgctatggatagg-taaaaccccgctttcttgggtacgggcatgggtatgggtaattacccgcaaatttaaatgggtataggcacgggg 48558362  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | | | ||| ||||||| ||||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||| |||||||||    
T  48558363 atgagcactgtactacccagccccgcaacccgcatatatgtatttatataatataataaataatttatttatttttgttgtacaatt 48558449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 3551173 - 3551351
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||  |||||| |||||| |||||| ||||| ||||| |||||||    
T  3551173 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtttgggcacgggtctgggtaa-tacccgcaaatttaaatgggtatgggcacgggt 3551271  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||| |||       ||||||| || ||||||||||||| | ||| ||| |||||||||||||| |||| ||||    
T  3551272 aagggtactatactacccagc-------cccgcatatacatatttatataatatcatagataatttatttatttttgatgtataatt 3551351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 16562419 - 16562248
Alignment:
Q  32 atggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatacta 130  Q
    ||||||||||||||| ||||||||||||| |  |||   ||||| ||||||||||||| ||||||| |||| |||||||||||||| |   ||| |||||    
T  16562419 atggatagggtaaaatctcgcttttatggatccgggtttgggtatgggtaattacccgcaaatttttatgggtatggacacgggtatgaacactgtacta 16562320  T
Q  131 cctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    || | ||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  16562319 cccatccccgcaacccgcatatatgtatttatataatattataaataatttatttattttttgtgtacaatt 16562248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 16603243 - 16603414
Alignment:
Q  32 atggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatacta 130  Q
    ||||||||||||||| ||||||||||||| |  |||   ||||| ||||||||||||| ||||||| |||| |||||||||||||| |   ||| |||||    
T  16603243 atggatagggtaaaatctcgcttttatggatccgggtttgggtatgggtaattacccgcaaatttttatgggtatggacacgggtatgaacactgtacta 16603342  T
Q  131 cctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    || | ||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  16603343 cccatccccgcaacccgcatatatgtatttatataatattataaataatttatttattttttgtgtacaatt 16603414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 26299915 - 26299729
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||| ||||||| | |||| ||||||  ||||  ||||| ||||||||||||| ||||||  |||| ||||| |||||||    
T  26299915 caaaaaatacccgctatgggtaggataaaaccccactttcatgggttcgggcttgggtatgggtaattacccgcaaatttgtatgggtatgggcacgggt 26299816  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| ||||  ||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  26299815 atgggcactgtactacccagccttgcaacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 26299729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 35092371 - 35092543
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||| |||| | ||||| |||||| |||||  ||| || ||||||||||| |||||||    
T  35092371 caaaaaatatccacaatgggtagggtaaaaccccgcttttatgggtctgggaaagggtacgggtaa-tacccacaaaattaaatggatatgggcacgggt 35092469  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttt 190  Q
    |||||||||||||| || || ||||||| |||||| || ||||||||||||| | ||||||  ||||||||||||    
T  35092470 aagggtactatactgcccagacccgcaa-ccgcatatacatatttatataatatcataaattatttatttatttt 35092543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 39415047 - 39414872
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||| || ||||||||| |||||| || ||  ||| || ||||| ||||| |||||||    
T  39415047 caaaaaatacccacaatgggtagcgtaaaaccccgcttttatgggtctgagcacgggtacgggtaa-tatccacaaaattaaatgggtatgggcacgggt 39414949  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  39414948 aagggtactatactgcccagacccgcagacccgcatatacatatttatataatatcataaattatttatttattttt 39414872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 19805508 - 19805334
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| |||||||||||||||||||| | ||||||||||| | |||||||||||| ||||||| | ||  ||| || ||||| || || |||||||    
T  19805508 caaaaaatatccacaatggatagggtaaaatcccgcttttatggatctgggcacgggtacgggtaat-atccacaaaattaaatgggtacgggcacgggt 19805410  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||| |||||||||||| || |||||||||||||  || ||||||||||||| | ||||||  |||||||||||||    
T  19805409 aaggatactatactacccagacccgcaacccgcaaatacatatttatataatatcataaattatttatttattttt 19805334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 46783555 - 46783379
Alignment:
Q  12 atccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggaca 110  Q
    |||| |||||||||| ||||||||||||| ||||| | ||||||||||||| ||||||| ||||  ||||| ||||| |||| || ||||||||||| ||    
T  46783555 atccgcaaaaaatactcacaatggataggataaaatcccgcttttatgggtctgggcacaggtacaggtaa-tacccataaaattaaatggatatgggca 46783457  T
Q  111 cgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttat 187  Q
    |||||||||||||||||||  | || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||    
T  46783456 cgggtaagggtactatactgtccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttat 46783379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 12920630 - 12920805
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| |||||| |||||  ||| || ||||  ||||| |||||||    
T  12920630 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaa-tacccacaaaattaaatgagtatgggcacgggt 12920728  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||| |||||| || || ||||||| ||||||| || ||||||||||| | | ||||||  |||||||||||||    
T  12920729 aagggtattatactgcccagacccgcaaccccgcatatacatatttatatagtatcataaattatttatttattttt 12920805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 7378137 - 7377943
Alignment:
Q  7 tggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatg 106  Q
    |||||| ||||||||||||||  |||| | ||||||||| || |||| ||||||||||||||  || |  |||||||||||| ||||||  |||| ||||    
T  7378137 tggacacccacaaaaaatacctgcaataggtagggtaaa-ccacgctattatgggtatgggcttggatccggtaattacccgcaaatttagatgggtatg 7378039  T
Q  107 gacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |   ||| |||||  ||||||||| | ||||||||||||||||| || |||||||| |||| |||||| || ||||||||||||||||||| ||||    
T  7378038 ggtgcggataaggacactatactatccagccccgcaacccgcatatacatatttatctaatataataattattttatttatttttggtgtataatt 7377943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 31455374 - 31455207
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||  |||||||||||||||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  31455374 caaaaaatacccacaatgagtagggtaaaacctcgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 31455276  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  31455275 aagggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 31455207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 34151964 - 34152161
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    |||||||||| ||||||||||||   |||| |||||||||| | |||||| |||| |   |||  ||||| ||||||||||| | ||||||  |||| ||    
T  34151964 atggacatccgcaaaaaatacccgttatgggtagggtaaaatcccgctttcatggatcccggcttgggtatgggtaattacctgcaaatttatatgggta 34152063  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||| |||||||| ||| | | ||||||| |||||||||||| |||| ||| ||| |||||||| | ||||||| ||||||||||||||||||||||||    
T  34152064 tgggcacgggtatgggcattgtactacccagccccgcaacctgcatatatgtatctatataatattataaataatttatttatttttggtgtacaatt 34152161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 34175160 - 34174963
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    |||||||||| ||||||||||||   |||| |||||||||| | |||||| |||| |   |||  ||||| ||||||||||| | ||||||  |||| ||    
T  34175160 atggacatccgcaaaaaatacccgttatgggtagggtaaaatcccgctttcatggatcccggcttgggtatgggtaattacctgcaaatttatatgggta 34175061  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||| |||||||| ||| | | ||||||| |||||||||||| |||| ||| ||| |||||||| | ||||||| ||||||||||||||||||||||||    
T  34175060 tgggcacgggtatgggcattgtactacccagccccgcaacctgcatatatgtatctatataatattataaataatttatttatttttggtgtacaatt 34174963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 10065889 - 10066064
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||  |||||| |||||  ||| |  ||||| ||||| ||||| |    
T  10065889 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtctgggcacgggtgcgggtaa-tacccacaaaataaaatgggtatgggcacggat 10065987  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||| ||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  10065988 aaggatactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 10066064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 33979357 - 33979174
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| |  ||| |||||||||||| |||||| |||| |  ||||  ||||| ||||||||||||| ||||||  |||| ||||  |||||||    
T  33979357 caaaaaatacccgctttgggtagggtaaaaccacgctttcatggatccgggcttgggtatgggtaattacccgcaaatttatatgggtatgtgcacgggt 33979258  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtaca 199  Q
    | ||  ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| |||||| ||||||| ||||||    
T  33979257 atggacactgtactacccagccccgcaacccgcatatatgtatttatataatattataaataatttattcatttttgttgtaca 33979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 3363443 - 3363268
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||  ||||||||||||||||||||  |||||||||| || |||||||| ||| | ||||  ||||  ||| || ||||| ||||| |||||||    
T  3363443 caaaaaatattcacaatggatagggtaaaactccgcttttatgagtctgggcacgagtacgagtaac-acccaaaaaattaaatgggtatgggcacgggt 3363345  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  3363344 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 3363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 36073213 - 36073052
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    ||||| ||||| ||||||||||||  ||||| |||||||||||| |||||| |||| |||||||| || |  ||||||||||||| |||||| || || |    
T  36073213 gatgggcatccgcaaaaaatacccgtaatgggtagggtaaaaccccgctttcatggatatgggcatggattcgggtaattacccgcaaatttaaaagggt 36073114  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatata 165  Q
    |  | |||||||| ||| ||||||||| | ||||||||||||||||| ||| | ||||||||    
T  36073113 accggcacgggtatgggcactatactatccagccccgcaacccgcatatatgtttttatata 36073052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 30392079 - 30391905
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | | || |||||||||||| || |||  ||| || || || ||||| ||||||||||| | |||||| ||||  ||||| ||||||     
T  30392079 caaaaaatacccgctacgggtagggtaaaaccccgttttcttggatacggacatgggtatgggtaattacctgcaaatttgaatgagtatgggcacgggg 30391980  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttt 190  Q
    | ||| ||| ||||||| | ||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||    
T  30391979 atgggcactgtactacccaaccccgcaacccgcatatatgtatttatataatatgataaataatttatttatttt 30391905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 45116346 - 45116196
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||| ||||||||||||||||||| |||||| |||| |||||| | ||||  |||||||||||||  || || || || ||  ||||| ||||    
T  45116346 aaaaaatacccgcaatggatagggtaaaaccccgctttcatggatatgggtatgggtccgggtaattacccgccaacttaaaagggtacagacacaggta 45116247  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
     ||| |||||| |||| ||||||||||||||||| ||| | ||||||||||    
T  45116246 tgggcactataatacccagccccgcaacccgcatatatgtttttatataat 45116196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 2960416 - 2960231
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    ||||||||||||||||||||||| | |||||||||||||||||  ||||| |||| ||||| |  ||||| ||||||||||| | |||||| ||||| ||    
T  2960416 atggacatccacaaaaaatacccgctatggatagggtaaaaccctgctttaatggatatggacttgggtatgggtaattacctgcaaatttgaatgggta 2960317  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||| ||| |            ||||||| ||| ||||||||||||| ||| |||||||| ||| | || |||| ||||||||||||| ||||||||||    
T  2960316 tgggcaccg------------tactacccagcaccgcaacccgcatatatttatttatacaatatgatgaataatttatttattttttgtgtacaatt 2960231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 25309150 - 25309333
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||||||||||||||| ||| |||||||| |||||| |||||||||||   ||||  ||  |||||||| |||||| ||||| |||||  ||   |||    
T  25309150 aaaaaatacccacaatgggtagagtaaaaccccgctttcatgggtatgggtttgggtctgggtattacccgcaaatttaaatgggtatgggtacatataa 25309249  T
Q  118 gggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||| || ||| | || |||||||| |  |||| |||||||| | ||||||| ||||||||||||| ||||| ||||    
T  25309250 gggtactatactgcccagcactgctacccgcatat-catatctatataatatgataaataatttatttattttttgtgtataatt 25309333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 33067117 - 33067288
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||| ||||| |||||||||||| | || | |||||| || | ||||||  ||||||| ||||  |||||| ||||||||||| ||||| ||||    
T  33067117 aaaatacccataatgggtagggtaaaacccctctatcatgggtctgaggacgggtccgggtaat-acccacaaatttaaatggatatgggcacggataag 33067215  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttt 190  Q
    ||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || ||||||| ||||    
T  33067216 ggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttttttt 33067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 40855521 - 40855704
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    ||||| |||||  |||||||||||||||||| || ||||||||| |||||| || | |||||||| ||||  ||||||||||||| ||| ||  |  | |    
T  40855521 gatgggcatccgtaaaaaatacccacaatgggtaaggtaaaacc-cgctttcatagatatgggcatgggttcgggtaattacccgcaaacttagaacggt 40855619  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    | |||||||| || ||| ||||||||||| | ||  ||||||||||| ||||| |||||||||| ||||||||| ||||| ||||    
T  40855620 acggacacggatatgggcactatactacccaaccttgcaacccgcatatatatttttatataatataataaataatttatatatt 40855704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 43224726 - 43224614
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    ||||| ||||||||||| ||||| ||||||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || |||||||||||    
T  43224726 aatttaaatggatatgggcacggataagggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttattt 43224627  T
Q  190 ttggtgtacaatt 202  Q
    || ||||| ||||    
T  43224626 ttagtgtataatt 43224614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 1875551 - 1875732
Alignment:
Q  12 atccacaaaaaatacccacaatggatagggtaaaacctcgcttt----tatgggtatgggcacgggtag-ggtaattacccgtaaattttaatggatatg 106  Q
    |||| |||||| || || |||||||||||||||| || ||||||    |||||||||| ||| ||||   ||||||| |||| ||| || || || || |    
T  1875551 atccgcaaaaattaaccgcaatggatagggtaaatccccgctttcatatatgggtatgagcatgggtccaggtaattgcccgcaaacttaaaagggtacg 1875650  T
Q  107 gacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    || ||||||| ||| | ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  1875651 gatacgggtatgggcattatactacccatccccgcaacccgcacatatgtatttatataatataataaataatttatatatt 1875732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 9354874 - 9354942
Alignment:
Q  134 agccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||| |||||||| ||| |||||||||||| | ||||||| |||||||||||||| |||||||||    
T  9354874 agccccgccacccgcatatatgtatttatataatattataaataatttatttatttttgatgtacaatt 9354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 28066949 - 28067025
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||||||| ||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||| ||||||    
T  28066949 tactacccagccccgtaacccgcatatatgtatttatataatatgataaataatttatttattttttgtgcacaatt 28067025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 21153602 - 21153524
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatat--atttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| | ||||||||||||||| |||||  ||||||||||| | ||||||| |||||||||| |||||||||||||    
T  21153602 tactacccaaccccgcaacccgcatatatatgtatttatataatatgataaataatttatttattgttggtgtacaatt 21153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 40341848 - 40342007
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||| ||||||||| |  | |||| |||||||||||||  |||  ||||||||||||| ||| || || || || ||||||||||| ||  |||||||    
T  40341848 caatgggtagggtaaatctccactttcatgggtatgggcataggtccgggtaattacccgcaaacttaaaagggtacggacacgggtatggacactatac 40341947  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||  | |||||||||||||   ||| |||||||||||| ||||||||| ||||| ||||    
T  40341948 tactcatccccgcaacccgcgaatatgtatttatataatataataaataatttatatatt 40342007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 38469589 - 38469679
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||| | | |||||||| | ||||||| ||||||||||||| | ||||||||    
T  38469589 gggtatgggcactgtactacccagccccgcaacccgcatatatgtgtctatataatatgataaataatttatttatttttcgagtacaatt 38469679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 42284914 - 42284812
Alignment:
Q  90 aaattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||||||||||||  |||| ||||| ||||||||||||||| || || ||||||| ||||||| || |||||||| |||| | |||| || ||||||||||    
T  42284914 aaattttaatgggcatgggcacggataagggtactatactgcccagacccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatt 42284815  T
Q  189 ttt 191  Q
    |||    
T  42284814 ttt 42284812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 16278988 - 16278855
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||  |||||| |||||||||||| |||||||| ||||||||||   |||  ||||||||||||| ||||||  |||| ||||    | ||||    
T  16278988 aaaaaatacctgcaatgggtagggtaaaaccccgcttttacgggtatgggccttggtctgggtaattacccgcaaatttagatgggtatgagtgcaggta 16278889  T
Q  117 agggtactatactacctagccccgcaacccgcat 150  Q
    |||| ||||||| ||| ||||||| |||||||||    
T  16278888 agggcactatacaacccagccccgtaacccgcat 16278855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 43702045 - 43702223
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| ||||||||||||  ||| | |||||| |||| ||||||  |||||| |||||   ||||| ||||||||||| |||||||||     
T  43702045 aaaatacccacaatgggtagggtaaaaccctgctatcatgggtttggggacgggtccgggtaa-tacccacgaatttaaatggatatgggcacgggtaaa 43702143  T
Q  119 ggtactatacta------cctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||| |||||||      || |||||| ||| ||||||| || |||||||| |||| | |||| || |||||||||||||    
T  43702144 ggtattatactatccaaccccagccccacaaccccgcatatacatatttatttaatatcataagtaatttatttattttt 43702223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 5923417 - 5923532
Alignment:
Q  51 gcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgca 149  Q
    |||||||||||| ||| || ||||  ||||||||||||| ||| ||  | || || || |||||||| ||| ||||||||||| || |||||||||||||    
T  5923417 gcttttatgggtctggacatgggtctgggtaattacccgcaaacttacacgggtacgggcacgggtacgggcactatactacccagacccgcaacccgca 5923516  T
Q  150 tgtatatatttatata 165  Q
    | ||| ||||||||||    
T  5923517 tatatgtatttatata 5923532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 24429954 - 24430127
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||||  ||||| ||||||||||||| ||||||||||||| | ||   ||||  |   |||||| | |||||| ||||| |||||  |||||||    
T  24429954 caaaaaatacctgcaatgaatagggtaaaaccccgcttttatgggtttaggtttgggtctgagtattacctgcaaatttaaatgggtatgggtacgggta 24430053  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttt 190  Q
    |  ||||| |||| || | | |||||| | |||| || ||||||||||||| | || |||| ||||||||||||    
T  24430054 aaagtactgtactgccaaactccgcaatctgcatatacatatttatataatatgatgaataatttatttatttt 24430127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 11244328 - 11244288
Alignment:
Q  155 atatttatataatgtaataaatactttatttatttttggtg 195  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  11244328 atatttatatgatataataaatactttatttatttttggtg 11244288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 25047341 - 25047270
Alignment:
Q  79 taattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcat 150  Q
    |||||||||| ||| || || ||||| || |||||||| ||| ||||||||||| |||||||||| ||||||    
T  25047341 taattacccgcaaacttaaaaggatacgggcacgggtatgggcactatactacccagccccgcaatccgcat 25047270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 38400731 - 38400799
Alignment:
Q  134 agccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||| ||| ||  | ||||||||||||| | ||||||| ||||||||||| ||||||| ||||    
T  38400731 agccccgcaatccgtataaacatatttatataatatgataaataatttatttatttgtggtgtataatt 38400799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 24446740 - 24446925
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  24446740 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 24446839  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24446840 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 24446925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 1221333 - 1221514
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  1221333 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 1221432  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttattta-tttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||     |||||||||||||||||| ||||||||||||||||    
T  1221433 agggtactatactacccagccccgcaacccgcatgtacatatttata-----taataaatactttatttattttttggtgtacaatt 1221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 33959769 - 33959954
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||| ||||||||| ||||||||||||  | |||| ||||||||||| ||||||||| |||||||| | ||||||||||||||||||| |||||||    
T  33959769 caaaaaatccccacaatgaatagggtaaaactccactttcatgggtatgggtacgggtaggataattacctgcaaattttaatggatatggatacgggta 33959868  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||  ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33959869 agggtactatactactcagccccgcaacccacatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 33959954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 33332083 - 33331908
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  33332083 caaaaaatacccataatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccaaaaaattaaatgggtatgggcacgggt 33331985  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| |  ||||||||||||| | ||||||  |||||||||||||    
T  33331984 aagggtactatactgcccagacccgcagacccgcatatgcatatttatataatatcataaattatttatttattttt 33331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 1329196 - 1329347
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||| ||| |||||||| |||||| ||||| |||| || ||||| ||||| |||||||    
T  1329196 caaaaaatacccacaatgggtagggtaaaaccccacttttatgggtctggacacgggtacgggtaa-tacccataaaattaaatgggtatgggcacgggt 1329294  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataat 167  Q
    |||||||||||||| || || ||||||| ||||||| || |||||||||||||    
T  1329295 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataat 1329347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 33329071 - 33328896
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  33329071 caaaaaatacccataatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccaaaaaattaaatgggtatgggcacgggt 33328973  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||| || |||||||| |  ||||||||||||| | ||||||  |||||||||||||    
T  33328972 aagggtactatactgcccagacccccagacccgcatatgcatatttatataatatcataaattatttatttattttt 33328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 20691204 - 20691390
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggata 104  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||||  |||||| ||  |  ||| |  ||||| ||    
T  20691204 atgggcatccacaaaaaatacccacaatgggtagggtaaaaccctgcttttatgggtctgggcacgggtgcgggtaa-taaacacaaaataaaatgggta 20691302  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||| ||||||||||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  20691303 tgggcacgggtaagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 20691390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 31071264 - 31071095
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  31071264 caaaaaatacccacaatgggtagggtaaaaccccgcttttgtgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 31071166  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttattt 185  Q
    |||||||||||||| || || ||||||| ||| ||| || ||||||||||||| | ||||||  |||||||    
T  31071165 aagggtactatactgcccagacccgcaaccccacatctacatatttatataatatcataaattatttattt 31071095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 6337668 - 6337483
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||||||||| || ||||  |||||| |||||  ||||| | |||| ||||| |||||||    
T  6337668 caaaaaaaacccacaatgggtagggtaaaaccccgctttcatgggtatggacatgggtctgggtaa-tacccacaaattgttatgggtatgggcacgggt 6337570  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||||||||| |||||| ||| ||||||| || ||||||||||||| |  ||||||  |||||||||||||||||| ||||    
T  6337569 aagggtattatactacccagccccacaaccccgcatatacatatttatataatattttaaata-attatttatttttggtgtataatt 6337483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 13532568 - 13532743
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||| | |||||||||||| ||||||||| ||| |||||||||||| ||  | || ||  ||| || ||||||||||| ||||||||    
T  13532568 caaaaaatacccacaattggtagggtaaaaccccgcttttataggtctgggcacgggtacggataatatccacaaaattaaatggatatgggcacgggta 13532667  T
Q  117 agggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || |  | |||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  13532668 agggtactatactgcccaaactcgcagacccgcatatacatatttatataatatcataaattatttatttattttt 13532743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 10545432 - 10545605
Alignment:
Q  31 aatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggtaagggtactatact 129  Q
    ||||| |||||||||||| |||||| ||||||||| ||  || |  | |||||||||||||||||||||||| ||||||||| |||||  |||||||| |    
T  10545432 aatgggtagggtaaaaccccgctttcatgggtatgagcttggttccgagtaattacccgtaaattttaatggctatggacacaggtaaatgtactatatt 10545531  T
Q  130 acctagccccgcaacccgcatgtatatatttatataatgtaataa--atactttatttatttttggtgtacaatt 202  Q
    | | |||||||||||| |||| || ||||||||||||   |||||  ||| ||||||||||||||||||||||||    
T  10545532 atccagccccgcaacctgcatatacatatttatataa-aaaataattatattttatttatttttggtgtacaatt 10545605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 9061730 - 9061891
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| ||||||  |||   ||||| ||||||||||||| ||||||  |||| ||||| |||||||    
T  9061730 caaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtccgggtttgggtatgggtaattacccgcaaatttatatgggtatgggcacgggt 9061829  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaata 177  Q
    | ||| ||| | ||| | ||||||||||||||||| ||| |||||||||||| | |||||||    
T  9061830 atgggcactgttctatccagccccgcaacccgcatatatgtatttatataatattataaata 9061891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 6799114 - 6799201
Alignment:
Q  115 taagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| ||| ||||||| |||  |||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  6799114 taagggcactgtactacccagcttcgcaacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 6799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 31783639 - 31783749
Alignment:
Q  19 aaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||||||||||||   |||||||||||| ||||||||||||| |||||| ||||| |||||| |||||  ||| || ||||| ||||| |||||||||    
T  31783639 aaaaatacccacaattagtagggtaaaaccccgcttttatgggtctgggcatgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggtaa 31783737  T
Q  118 gggtactatact 129  Q
    ||||||||||||    
T  31783738 gggtactatact 31783749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 28770265 - 28770141
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| || ||||||| | |||||| || ||||||| ||| |||  ||||||| ||||  |||||||| ||| |||||||||||||    
T  28770265 caaaaaatatccacaatgggtatggtaaaatcccgctttcataggtatggacacaggtccgggtaat-acccacaaatttta-tgggtatggacacgggt 28770168  T
Q  116 aagggtactatactacctagccccgca 142  Q
    ||||||||||||||||| |||||||||    
T  28770167 aagggtactatactacccagccccgca 28770141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 10499649 - 10499460
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    ||||||||| || ||||||||| |||| |||||||||||||||||| ||  || |  | ||  ||||||||||||| |||||  ||||| |||||    |    
T  10499649 ccacaaaaattatccacaatgggtaggataaaacctcgcttttatgcgttcggacttgagttcgggtaattacccgcaaattcaaatgggtatgggtggg 10499550  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| ||| || ||||| ||||||||| |||||||||| ||  ||||||| |||| | ||||||  |||| |||||||||||||||||||    
T  10499549 ggtatgggcaccatactgcctagccccacaacccgcatatacttatttatttaatatgataaattatttagttatttttggtgtacaatt 10499460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 29640396 - 29640506
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| ||| || ||||||||| || ||||  ||   |||||| ||||| ||||| |||||||    
T  29640396 caaaaaatatccacaatgggtagggtaaaaccccgcttttataggtctgagcacgggtacggataatacccacaaaatttaaatgggtatgggcacgggt 29640495  T
Q  116 aagggtactat 126  Q
    |||||||||||    
T  29640496 aagggtactat 29640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 6336884 - 6337032
Alignment:
Q  40 ggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccc 138  Q
    ||||||||| |||||| |||| |||||||| || |  ||||||||||||| || ||  || |||||  | |||||||| ||| ||||||||||| |||||    
T  6336884 ggtaaaaccccgctttcatggatatgggcatggatccgggtaattacccgcaacttaaaa-ggatacaggcacgggtatgggcactatactacccagccc 6336982  T
Q  139 cgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||||||||||| |||   |||||||||| ||||||||| ||||| ||||    
T  6336983 cgcaacccgcatatatgattttatataatataataaataatttatatatt 6337032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 7808235 - 7808052
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaagg 119  Q
    |||||| ||||||||| |||||||||| | |||| | |||||| |||  ||||||  ||  | |||||   ||||| ||||| ||||| |||||||||||    
T  7808235 aaaatatccacaatgggtagggtaaaatcccgctatcatgggtctggagacgggttcggataatacccacgaatttaaatgggtatgggcacgggtaagg 7808136  T
Q  120 gtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||| || ||||| | || ||||||| || |||||| | |||| | |||| || ||||||||||||| ||||| ||||    
T  7808135 gtactatactgcccagccctgtaaccccgcatatacatatttctttaatatcataagtaatttatttatttttagtgtataatt 7808052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 31510566 - 31510676
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| ||| || |||||||||  | ||||  ||   |||||| ||||| ||||| |||||||    
T  31510566 caaaaaatatccacaatgggtagggtaaaaccccgcttttataggtctgagcacgggtacagataatacccacaaaatttaaatgggtatgggcacgggt 31510665  T
Q  116 aagggtactat 126  Q
    |||||||||||    
T  31510666 aagggtactat 31510676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 31538540 - 31538592
Alignment:
Q  137 cccgcaacccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    |||||||||||||| || ||||||||||||| | ||||||| |||||||||||    
T  31538540 cccgcaacccgcatatacatatttatataatatgataaataatttatttattt 31538592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 6277432 - 6277617
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  6277432 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatgggcacgggtagggttattacccgtaaattttaatgggtatggacacgggta 6277531  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6277532 agggtactatactactcagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 6277617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 41692087 - 41692272
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  41692087 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 41692186  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41692187 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 41692272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 34718403 - 34718588
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  34718403 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 34718502  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34718503 agggtattatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 34718588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 19254067 - 19254252
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||    
T  19254067 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatgggtacgggtagggtaattacccgcaaattttaatgggtatggacacggata 19254166  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  19254167 agggtactatactacccagccccgcaactcgcatgtacatatttatataatataataaatactttatttatttctggtgtacaatt 19254252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 25694297 - 25694481
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||| ||||||| |||||| |||||||||||||| ||||||||||||||||| ||||| ||||||  || ||||| ||||    
T  25694297 caaaaaatacccacaatgggtaggataaaaccccgctttcatgggtatgggcacaggtagggtaattacccgcaaattgtaatgggcatagacacaggta 25694396  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25694397 agggtactatactacccagccccgcaaccc-catgtatatatttatataatataataaatactttatttatttttggtgtacaatt 25694481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 38310277 - 38310080
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggata 104  Q
    |||||| |||| ||||||||| | | ||||| || ||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||||| |||    
T  38310277 gatggatatccgcaaaaaatatctataatgggtatggtaaaaccccgctttcataggtatgggcacgggtagggtaattatccgtaaattttaatgaata 38310178  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| |||| |||||||||||||| ||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || |||||    
T  38310177 tggagacggataagggtactatacaactcagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggcgtgcaatt 38310080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 10937911 - 10937727
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||  ||||  |||||||||| |  ||||||  |||| |||||   |||||    
T  10937911 caaaaaatacccacaataggtagggtaaaaccccgcttttatgggtatgggcttgggtccgggtaattacgc--aaatttagatgggtatgggtgcgggt 10937814  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  10937813 aagggcactatactacccagccccgcaacccgcatatacatatttatataatataataaatattttatttaattttggtgtacaatt 10937727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 14088744 - 14088569
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  14088744 caaaaaatgcccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 14088646  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  14088645 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 14088569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 14645792 - 14645617
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||||||||| |||||||    
T  14645792 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatggatatgggcacgggt 14645694  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||| || |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  14645693 aagggtactatactgcccagacccacagacccgcatatacatatttatataatatcataaattatttatttattttt 14645617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 14088136 - 14087953
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||||||| ||||||  |||||| |||||   ||||| ||||| |||||  |||||||||    
T  14088136 aaaatacccacgatggatagggtaaaaccccgctatcatgggtatggggacgggtccgggtaa-tacccacgaatttaaatgggtatgggtacgggtaag 14088038  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  14088037 ggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 14087953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 7978504 - 7978333
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||||| |||| | |||||| |||| ||| ||  ||||||| ||||  |||||| ||||||||||| ||||| ||||    
T  7978504 aaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgagtccgggtaat-acccacaaatttaaatggatatgggcacggataag 7978406  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttt 190  Q
    ||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||    
T  7978405 ggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttt 7978333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 15718829 - 15718998
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||  ||| |||||||       |||||  ||| || ||||| ||||||||||||||    
T  15718829 caaaaaatacccacaatgggtagggtaaaaccccacttttatgggtccgggtacgggtaa------tacccacaaaattaaatgggtatggacacgggta 15718922  T
Q  117 agggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  15718923 agggtactatactgcccagacccgcagacccgcatatacatatttatataatatcataaattatttatttattttt 15718998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 30775339 - 30775147
Alignment:
Q  11 catccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggac 109  Q
    ||||| ||||||||| |||| |||| |||||||||||  |||||| || | |  || |  ||||| ||||||||||||| ||||||  |||| ||||| |    
T  30775339 catccgcaaaaaatatccactatgggtagggtaaaactccgctttcatagatccggacttgggtatgggtaattacccgcaaatttatatgggtatgggc 30775240  T
Q  110 acgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||  ||| ||||||| | |||||||||| |||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  30775239 acgggtatggacactgtactacccatccccgcaacctgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 30775147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 15673495 - 15673641
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggat 103  Q
    ||||| || ||||||||||||||| |||||| |||||||||||| |||||| |||| |||||||| ||||  ||||||||||||| ||| || || || |    
T  15673495 gatgggcacccacaaaaaatacccgcaatgggtagggtaaaaccccgctttaatggatatgggcatgggtccgggtaattacccgcaaacttaaaagggt 15673594  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcat 150  Q
      || |||||||| ||| ||||||||||| |||||||||||||||||    
T  15673595 gcgggcacgggtacgggcactatactacccagccccgcaacccgcat 15673641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 41617052 - 41616885
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||| |||||||| ||||||| || || ||| || ||||| ||||| |||||||    
T  41617052 caaaaaatacccacaatgggtaggataaaaccccgcttttatgggtctggtcacgggtacgggtaat-actcgcaaaattaaatgggtatgggcacgggt 41616954  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  41616953 aagggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 41616885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 29456263 - 29456086
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||| ||||||||| |||||||||| | |||| | |||| | |||| ||||||  ||||||| ||||   ||||||||||||||||| ||||| ||||    
T  29456263 aaaatatccacaatgggtagggtaaaatcccgctatcatggatctggggacgggtccgggtaat-acccacgaattttaatggatatgggcacggataag 29456165  T
Q  119 ggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    | ||||||||| || ||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| |||||    
T  29456164 gatactatactgcccagccccgcaccccgcatatacatatttatttaatatcataactaatttatttatttttagtgta 29456086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 19549790 - 19549706
Alignment:
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtg 195  Q
    |||||||||| ||||||||||  ||||||||||| ||||| || ||||||||||||| | |||||||||||||||||||||||||    
T  19549790 cgggtaagggcactatactactcagccccgcaactcgcatatacatatttatataatatgataaatactttatttatttttggtg 19549706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 42031416 - 42031237
Alignment:
Q  24 tacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggtaagggta 122  Q
    ||||| ||||||||||||||||| | |  || ||||||||||||   |||| ||| |||||| ||| ||||||  |||| | |||   | |||||||| |    
T  42031416 tacccgcaatggatagggtaaaatcccctttatatgggtatgggtttgggtcggggtaattatccgcaaatttagatgggtgtgggtgcaggtaagggca 42031317  T
Q  123 ctatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| || |||  |||||||||||| || ||||||||||||| |||||||||||||||||||||||| | |||||||    
T  42031316 ctatactccccagcttcgcaacccgcatatacatatttatataatataataaatactttatttatttttgttttacaatt 42031237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 5657257 - 5657429
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||| || ||||||| | | |||||||||||||||||  || |  | ||||||||||| ||||||  |||| ||||    |||||||||| |||||||    
T  5657257 caatgggtatggtaaaatcccacttttatgggtatgggcttggatccgtgtaattacccgcaaatttagatgggtatgagtgcgggtaagggcactatac 5657356  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| ||||||||||||||| | || ||||||||||||| || |||||| |||||||| |||||| ||||||||    
T  5657357 tacccagccccgcaacccgcttatacatatttatataatatagtaaatattttatttagttttgg-gtacaatt 5657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 14646067 - 14645991
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||||||||||||||||| |||  ||||||||||| | ||||||| ||||||||||||||||||||||||    
T  14646067 tactacccagccccgcaacccgcatatatgcatttatataatattataaataatttatttatttttggtgtacaatt 14645991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 31149337 - 31149520
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||||||||||||||||  ||| | |||||| |||| | | ||  ||||||| ||||  |||||| ||||  ||||| ||||||||||    
T  31149337 aaaatacccacaatggatagggtaaaaccctgctatcatgggtctgggaatgagtccgggtaat-acccacaaatttaaatgagtatgggcacgggtaag 31149435  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || ||||| |||| ||||||| || ||| |||| |||| | |||| || ||||||||||||| ||||| ||||    
T  31149436 ggtactatactgcccagccctgcaaccccgcatatacatacttatttaatattataagtaatttatttatttttagtgtataatt 31149520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 35854043 - 35853883
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||||   |||| |||||||||||| || ||| |||| |  ||||  ||||| ||||||||||||| ||||||  |||| |||||  |||||||    
T  35854043 aaaaaatacccgttatgggtagggtaaaaccccgttttcatggatccgggcttgggtatgggtaattacccgcaaatttatatgggtatgggaacgggta 35853944  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaata 177  Q
     ||| ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||    
T  35853943 tgggcactgtactacccagccccgcaatccgcatatatatatttatataatattataaata 35853883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 36470144 - 36470318
Alignment:
Q  28 cacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactat 126  Q
    ||||||||||||||||||||  ||||||  ||||||||| |||||||  ||||||| ||||  ||||| | ||  |||||| |||||||||  |||||||    
T  36470144 cacaatggatagggtaaaactccgctttcttgggtatggacacgggtccgggtaat-acccacaaattgttatcaatatgggcacgggtaaaagtactat 36470242  T
Q  127 actacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| |||||| ||| ||||||| || ||||||||||||| |  ||||||  |||||||||||||||||| ||||    
T  36470243 actacccagccccacaaccccgcatatacatatttatataatattttaaata-attatttatttttggtgtataatt 36470318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 4572737 - 4572563
Alignment:
Q  24 tacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggta 122  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||| ||||| ||||||| ||||  ||| || ||||||||||| |||||||||  |||    
T  4572737 tacccacaatgggtaggataaaaccatgcttttatgggtatgggcatgggtacgggtaat-acccacaaaattaaatggatatgggcacgggtaaaagta 4572639  T
Q  123 ctatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
     |||||| |  ||  |||||| ||||||| || | ||||||||||| | ||||||  ||||| |||||||||||||    
T  4572638 ttatactgctcagatccgcaaccccgcatatacaaatttatataatatcataaattatttatctatttttggtgta 4572563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 33346576 - 33346723
Alignment:
Q  5 gatggacatccacaaaaaa-tacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatgga 102  Q
    |||||||| |||||||||| ||||| |||| ||||| |||||| | |||||| |||| |||||||| ||||  ||||||||||||| ||| || || |||    
T  33346576 gatggacacccacaaaaaaatacccgcaatagatagcgtaaaatcccgctttcatggatatgggcatgggttcgggtaattacccgcaaacttaaaagga 33346675  T
Q  103 tatggacacgggtaagggtactatactacctagccccgcaacccgcat 150  Q
    |  || |||||||| ||| ||||||||||| |||||| ||||||||||    
T  33346676 tgcgggcacgggtacgggcactatactacccagccccacaacccgcat 33346723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 23137888 - 23138010
Alignment:
Q  81 attacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatat-ttatataatgtaataaatact 179  Q
    |||||||| |||||| |||||||| ||| ||| |||||||||||||| |  | | ||||||||||||||| || |||| ||||||||| | ||||||| |    
T  23137888 attacccgcaaatttaaatggatacggatacgcgtaagggtactataatgtccacccccgcaacccgcatttacatatcttatataatatgataaatagt 23137987  T
Q  180 ttatttatttttggtgtacaatt 202  Q
    |||||||||||| ||||| ||||    
T  23137988 ttatttattttttgtgtataatt 23138010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 639052 - 639120
Alignment:
Q  134 agccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  639052 agccccgcaacccgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 639120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 6224552 - 6224663
Alignment:
Q  90 aaattttaatggatatggacacgggtaagggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||||||||||| ||||| ||||||||||  ||||||||| || ||||||||||||| |||| || |||||||| |||| | |||| || ||||||||||    
T  6224552 aaattttaatgggtatgggcacgggtaag--tactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatt 6224649  T
Q  189 tttggtgtacaatt 202  Q
    ||| ||||| ||||    
T  6224650 tttagtgtataatt 6224663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 35935912 - 35935727
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacggg--tagggtaattacccgtaaattttaatgga 102  Q
    ||||||||||||||||||||||   |||||||||||||||||    ||||| |||| |||||||| |||    ||||||||||||| ||| || || ||     
T  35935912 gatggacatccacaaaaaatacttgcaatggatagggtaaaattcagctttcatggatatgggcatgggccccgggtaattacccgcaaacttaaaaggg 35935813  T
Q  103 tatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    || || |||||||| ||  ||||||||||| || ||  |||||| ||| ||| | |||||||||| ||||||||| ||||| ||||    
T  35935812 tacgggcacgggtatggacactatactacccagtcctacaacccacatatatgtttttatataatataataaataatttatatatt 35935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 14832559 - 14832483
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtac 198  Q
    ||||||||| | |||| |||||||| ||| |||| ||||||||||| ||||||||| ||||||||||||| ||||||    
T  14832559 actatactatccagccacgcaacccacatatataaatttatataatataataaatattttatttattttttgtgtac 14832483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 16187194 - 16187118
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| | ||| ||||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  16187194 tactacccaaccctgcaacccgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 16187118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 22631881 - 22632064
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||| ||||||||| |||||||||||  |||| | ||| || |||| ||||||  ||||||| ||||   ||||| ||||| ||||| ||| ||||||    
T  22631881 aaaatatccacaatgggtagggtaaaactccgctatcatgtgtctggggacgggtctgggtaat-acccacgaatttaaatgggtatgggcacaggtaag 22631979  T
Q  119 ggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || ||||| ||||||| |||| || |||||||| |||| | |||| || |||||| |||||| ||||| ||||    
T  22631980 ggtactatactgcccagccctgcaaccctgcatatacatatttatttaatatcataagtaatttattcatttttagtgtataatt 22632064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 3049395 - 3049486
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    ||||||||||| |||||||| ||||| ||||||||||| || ||  ||| ||||||| |||| |||||||||||| ||| |||||| |||||    
T  3049395 gggtaattaccagtaaatttgaatgggtatggacacggatatggacactgtactacccagcctcgcaacccgcatatatgtatttagataat 3049486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 6311434 - 6311263
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||| |||||||||||| |||||| |||||| || ||||||||    ||||||||||  |||||| ||||| |||||||| || ||| |  | ||||     
T  6311434 caatgggtagggtaaaaccccgctttcatgggtttgtgcacgggtctatgtaattacccacaaatttaaatgggtatggacatggataaagacattatat 6311335  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | |  ||||||||||| ||||| || ||||||||||||| | | ||||| ||||||||||||  ||||||||||    
T  6311334 ttctcagccccgcaactcgcatatacatatttatataatatgacaaataatttatttatttt--gtgtacaatt 6311263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 1061436 - 1061264
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||| ||||||| | |||||||| || || ||||||||| |||||| ||||   ||| || ||||| ||||||||||  |    
T  1061436 caaaaaatacccacaatgggtaggataaaaccccacttttatgagtctgagcacgggtacgggtaa-tacctacaaaattaaatgggtatggacacgaat 1061338  T
Q  116 aagggtactatactacctagccccgcaacc-cgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||| |||||||| | || || ||| ||||| ||||| || || |||||||||| | ||||||  ||||||||||    
T  1061337 aagagtactatattgcccagacccacaacctcgcatatacatgtttatataatatcataaattatttatttatt 1061264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 25828058 - 25828242
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||| || ||||||||| |||||||||| |||||||| |||| ||||||   ||||  ||   ||||| | || ||| ||||| |||||| |||||||    
T  25828058 caaaaattatccacaatgggtagggtaaaatctcgctttcatggatatgggattgggtctgggtgttacctgcaattttaaatgggtatggatacgggta 25828157  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
     | || ||||||| || | ||||||||  | ||| || ||||||||||||| | |||||||  |||||||||||||||||| ||||    
T  25828158 tgagtcctatactgcccaaccccgcaaatcacatatacatatttatataatatcataaata-attatttatttttggtgtataatt 25828242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 18595762 - 18595662
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    ||||| ||||| ||||  ||||||||||||||||||||| || |||||| ||| ||||||| || |||||||| |||| | |||| || ||||||| |||    
T  18595762 aatttaaatgggtatgagcacgggtaagggtactatactgcccagccccacaaccccgcatatacatatttatttaatatcataagtaatttattttttt 18595663  T
Q  190 t 190  Q
    |    
T  18595662 t 18595662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 4898458 - 4898501
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatata 165  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  4898458 actatactacccagccccgcaacccgcatatatgtatttatata 4898501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 4898379 - 4898436
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggt 62  Q
    |||||| | |||||||||| |||| |||||| |||||||||||| |||||| ||||||    
T  4898379 gatggatacccacaaaaaaaacccgcaatgggtagggtaaaaccccgctttcatgggt 4898436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 24488821 - 24488905
Alignment:
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    ||||| ||||||| ||| || ||| | ||||||||||| || | ||||||||||| | ||||||| ||||||||| ||| |||||    
T  24488821 ggtaaaggtactacactgcccagctctgcaacccgcatatacaaatttatataatatgataaataatttatttatattttgtgta 24488905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 53141108 - 53140923
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  53141108 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 53141009  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53141008 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 53140923  T

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Target: chr4; HSP #2
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 46081221 - 46081031
Alignment:
Q  11 catccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggaca 110  Q
    ||||| ||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  46081221 catccgcaaaaaatatccacaatgggtagggtaaaaccccgctttcatgggtatgggcacgggtagggtaattacgcgcaaattttaatggatatggaca 46081122  T
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46081121 cgggtaagggtattatactacc-agccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 46081031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 33733872 - 33733688
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||  |||||||| |||||||||||| |||||||||||  |||| ||||||||| ||||||||||| |||||||||||| |||| |||||||||    
T  33733872 caaaaaatattcacaatgggtagggtaaaacc-cgcttttatggacatggacacgggtagagtaattacccgcaaattttaatgggtatgaacacgggta 33733774  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33733773 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 33733688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 22248356 - 22248173
Alignment:
Q  19 aaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    ||||||||||||||||| ||| |||||||| |||||| ||| ||||||| |||| ||||||||||||||| |||||||||||| ||||||||||| ||||    
T  22248356 aaaaatacccacaatgggtagagtaaaaccccgctttcatgagtatgggtacggatagggtaattacccgcaaattttaatgggtatggacacggataag 22248257  T
Q  119 ggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
     ||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  22248256 agtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatattttatttatttttggtgtacaatt 22248173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 29405492 - 29405677
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||| ||| | |||| ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29405492 caaaaaatacccataattggtaggataaaactccgctttcatgggtatgggcacgggtagggtaattacccgcaaattttaatggatatggacacgggta 29405591  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    || ||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  29405592 agagtactatactacccagccctgcaacccacatgtacatatttatataatataataaatactttatttatttttagtgtataatt 29405677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 45098058 - 45097875
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||| | |||||||||||  ||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||| |||||||    
T  45098058 caaaaaatacccacaataggtagggtaaaactccgcttttataggtatggg-acgggtagggtaattacccgcaaattttaatgggtatgga-acgggta 45097961  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| | ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45097960 agggtattgtactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 45097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 52801918 - 52802063
Alignment:
Q  57 atgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatat 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| ||    
T  52801918 atgggtatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacaggtaagggtactatactacccagccccgcaacccgcatgtacat 52802017  T
Q  157 atttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||    
T  52802018 atttatataatataataaatactttatttatttttgatgtacaatt 52802063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 29148641 - 29148816
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  29148641 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 29148739  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  29148740 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 29148816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 32655144 - 32655319
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  32655144 caaaaaatacccacaatggatagggtaaaaccccgcttttatggatctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 32655242  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  32655243 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 32655319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 42052892 - 42053067
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  42052892 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 42052990  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  42052991 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 42053067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 52801837 - 52801936
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  52801837 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatgggcacgggta 52801936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 24487129 - 24486945
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||||| ||||| |||||||| |||||||||| ||| ||||||||  ||||  || |||||||||| ||||||  |||| |||||    |||||    
T  24487129 aaaaaatacccataatgggtagggtaatacctcgcttt-atgtgtatgggcttgggtctggataattacccgcaaatttagatgggtatgggtgtgggta 24487031  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| ||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||| ||||||||||||||| ||| ||||    
T  24487030 agggcactatactacccagccccgcaacccgcatatacatatttatataatataataaatattttatttatttttggcgtataatt 24486945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 52180399 - 52180574
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||| ||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  52180399 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcatgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 52180497  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  52180498 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 52180574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 9931017 - 9930819
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    ||||||||||| ||||||||| || |||||| |||||||||||| ||||||||| |||||||||  | ||  ||||||||||||| || |||   ||| |    
T  9931017 gatggacatccgcaaaaaatatccgcaatgggtagggtaaaaccccgcttttataggtatgggcttgtgtccgggtaattacccgcaattttaggtgggt 9930918  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||   |||||| ||| ||||||||||| ||||| |||| |||||| || |||||||| |||| ||||||||| |||||||||||||| |||||||||    
T  9930917 atgggtgcgggtatgggcactatactacccagcccggcaatccgcatatacatatttatttaatataataaatattttatttatttttgatgtacaatt 9930819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 28233749 - 28233934
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| ||||||  ||||  ||||| || |||||||||| ||||||  |||| ||||| |||| ||    
T  28233749 caaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtccgggcttgggtatggataattacccgcaaatttatatgggtatgggcacgagt 28233848  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | | ||||| ||||||||||||||||||||||||    
T  28233849 atgggcactgtactacccagccccgcaacccgcatatatgtatttatataatatta-aaataatttatttatttttggtgtacaatt 28233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 14577276 - 14577097
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| |||||||||||||||||||| | ||||||| ||| | ||| |||||||| ||||||| ||||  ||| || ||||| || || ||||    
T  14577276 ccacaaaaaatatccacaatggatagggtaaaatcccgcttttgtggatctggacacgggtacgggtaat-acccacaaaattaaatgggtacgggcacg 14577178  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgta--ataaatactttatttattttt 191  Q
    |||||||||||||||||||| || |||||||||||||| || ||||||||||||| ||  ||||||  |||||||||||||    
T  14577177 ggtaagggtactatactacccagacccgcaacccgcatatacatatttatataatatatcataaattatttatttattttt 14577097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 21076311 - 21076140
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  21076311 caaaaaatatccacaatggatagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 21076213  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttat 187  Q
    |||| ||||||| | || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||    
T  21076212 aaggatactatattgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttat 21076140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 38001081 - 38000906
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||| | ||||| |||||||||||| || ||||||||||||||||||||||| ||||||| ||||  ||| || ||||||||||| |||| ||    
T  38001081 caaaaaatacctataatgggtagggtaaaaccccgtttttatgggtatgggcacgggtacgggtaat-acccacaaaattaaatggatatgggcacgagt 38000983  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| |||||||  | ||||||||||||| | ||||||  |||||||||||||    
T  38000982 aagggtactatactgcccagacccgcaaccccgcatacacatatttatataatatcataaattatttatttattttt 38000906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 42755826 - 42755651
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  42755826 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 42755728  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||| |||||| || || ||||||| ||||||| || ||||||||||| | | ||||||  |||||||||||||    
T  42755727 aagggtattatactgcccagacccgcaaccccgcatatacatatttatatagtatcataaattatttatttattttt 42755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 3094602 - 3094777
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| ||| | |||| |||||  ||| || ||||| ||||| |||||||    
T  3094602 caaaaaatacccacaatgggaagggtaaaaccccgcttttatgggtctgggcacgagtacgagtaa-tacccacaaaattaaatgggtatgggcacgggt 3094700  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  ||||||| |||||    
T  3094701 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttcttttt 3094777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 23147890 - 23147715
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| | | |||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  23147890 caaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctaggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 23147792  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    || ||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  23147791 aaaggtactatactgcccagacccgcagacccgcatatacatatttatataatatcataaattatttatttattttt 23147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 31713167 - 31713351
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggat 103  Q
    ||||| ||||| |||||| ||| | |||||| ||||||||| || |||||| ||||||||||||| ||||  | ||||||||||| ||| || || ||||    
T  31713167 gatgggcatccgcaaaaattactcgcaatgggtagggtaaatccccgctttcatgggtatgggcatgggtccgagtaattacccgcaaacttaaaaggat 31713266  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    | |||||||| || ||| ||||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  31713267 acggacacggatacgggcactatactacccatccccgcaacccgcacatatgtatttatataatataataaataatttatatatt 31713351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 34459259 - 34459442
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||| | |||||||||||  |||| | ||||||||||| ||||||  ||||||| ||||   ||||||||||| ||||| ||||||||||    
T  34459259 aaaatacccacaattggtagggtaaaacaccgctatcatgggtatggggacgggtccgggtaat-acccacgaattttaatgggtatgggcacgggtaag 34459357  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  34459358 ggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 34459442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 39804793 - 39804619
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||| ||||||||||||||||||||| |||||  ||||| ||||||||||||| ||||||      ||||||      ||    
T  39804793 caaaaaatacccgctatgggtaggataaaacctcgcttttatgggtctgggcttgggtatgggtaattacccgcaaattt------atatgg------gt 39804706  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||||||||||||||||||||| ||| |||||||||||| | ||||||| |||||| |||||||||||||||||    
T  39804705 atgggcactgtactacctagccccgcaacccgcatatatgtatttatataatattataaatattttattaatttttggtgtacaatt 39804619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 22830335 - 22830164
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||| ||||| |||||| ||||||||| || |||| | ||||||||||||| ||||  ||||||||||||| ||| || || || || |||||||||||    
T  22830335 aaaaattacccgcaatgggtagggtaaatccccgctatcatgggtatgggcatgggtccgggtaattacccgcaaacttaaaagggtacggacacgggta 22830236  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
     ||| ||||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  22830235 tgggcactatactacccatccccgcaacccgcacatatgtatttatataatataataaataatttatatatt 22830164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 12186261 - 12186108
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| ||||||||| |||||||||| | ||||||||||| | ||| |||||||| ||||||| ||||  ||| || ||||| || || ||||    
T  12186261 ccacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacacgggtacgggtaat-acccacaaaattaaatgggtacgggcacg 12186163  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    ||||||||||||||| |||| || |||||||||||||| || |||||||||||||    
T  12186162 ggtaagggtactatattacccagacccgcaacccgcatatacatatttatataat 12186108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 21246323 - 21246138
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||| ||  | |||||  | | || ||||||||| | |||||||||    
T  21246323 aaaaaatacccacaatgggtagggtaaaatcccgcttttatgggtatggacacgggtacggataatacccacagaattaaatggatattggcacgggtaa 21246224  T
Q  118 gggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||| |  | || ||||||| ||||||| || | ||||||||||| | ||||||  ||||| ||||||||||||| ||||    
T  21246223 gggtactatattgtccagacccgcaaccccgcatatacaaatttatataatatcataaattatttatctatttttggtgtataatt 21246138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 52596030 - 52595855
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||| |||||| |||||||||||||| ||||||||| | | |||||||||||| |||||| |||||  ||| |  ||||| ||||| |||||||    
T  52596030 caaaaaatactcacaatagatagggtaaaaccccgcttttatagatctgggcacgggtacgggtaa-tacccacaaaataaaatgggtatgggcacgggt 52595932  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||| || |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  52595931 aagggtactatactgcccagaccctcagacccgcatatacatatttatataatatcataaattatttatttattttt 52595855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 41003807 - 41003633
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||| ||||||| || ||||||||| ||||||||||||| |||||||| ||| | |||| |||||  ||| || ||||| ||||||||||||||    
T  41003807 aaaaaatacctacaatgggtatggtaaaaccccgcttttatgggtctgggcacgagtacgagtaa-tacccacaaaattaaatgggtatggacacgggta 41003709  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||| |||||| |  || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  41003708 agggtattatactgctaagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 41003633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 1757660 - 1757841
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||| ||||| |||||||||||| |||||| |||    ||| |||| ||  ||  | |||||  ||||| | |||| ||||| ||||||||    
T  1757660 caaaaaatacccataatgggtagggtaaaaccccgctttcatg----tggacacgagtccggataatacccacaaattgttatgggtatgggcacgggta 1757755  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||||||||| |  ||||||  |||||||||||||||||| ||||    
T  1757756 agggtactatactacctagccccgcaaccccgcatatacatatttatataatattttaaata-attatttatttttggtgtataatt 1757841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 12518400 - 12518584
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||  ||||||| |||||||||||| | |||||||||||||||||  | ||  ||||||||||| | ||||||  |||| |||||   ||||||    
T  12518400 aaaaaatacttacaatgggtagggtaaaaccccacttttatgggtatgggcttgagtccgggtaattacc-gcaaatttagatgggtatgggtgcgggta 12518498  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||  ||||||||| | ||||| |||| |||||| || ||||||||||||| || |||||| ||||||||||||||||||| ||||    
T  12518499 aggccactatactatccagccctgcaatccgcatatacatatttatataatatagtaaatattttatttatttttggtgtagaatt 12518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 652720 - 652545
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||  |||||||||||| | ||||||||||| ||||||| |||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  652720 caaaaaatacccacaatgtgtagggtaaaacccctcttttatgggtctgggcacaggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 652622  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||| |||||| || || || |||| ||||||| || ||||||||||||| | ||||||  || ||||||||||    
T  652621 aagggtattatactgcccagacctgcaaccccgcatatacatatttatataatatcataaattattcatttattttt 652545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 11035178 - 11035006
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| || |||||| |||||||||||| |||||| |||| ||| |||| ||||  ||||||||||||| ||| || || || || || |||||||    
T  11035178 caaaaaatatccgcaatgggtagggtaaaaccccgctttcatggatataggcatgggtccgggtaattacccgcaaacttaaaagggtacgggcacgggt 11035079  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |  |  ||||||||||| ||||||||||||||||| ||| | |||||||||| ||||||||| ||||| ||||    
T  11035078 attgacactatactacccagccccgcaacccgcatatatgtttttatataatataataaataatttatatatt 11035006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 25938841 - 25938675
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||||||||||| |||||||||||  ||||||||||||| ||| |||||||| ||||||| ||||  ||| || ||||| ||||| ||||||||    
T  25938841 aaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctggacacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggta 25938743  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  25938742 agggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 25938675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 41781171 - 41781000
Alignment:
Q  32 atggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatacta 130  Q
    |||| ||||||||||| ||| ||||||||||  ||    ||||| |||||||||||||  ||||| ||||| || |||||| |||| ||  ||| |||||    
T  41781171 atgggtagggtaaaacttcgtttttatgggtccggatttgggtacgggtaattacccgccaatttgaatgggtacggacacaggtatggacactgtacta 41781072  T
Q  131 cctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |  ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  41781071 ctcagccccgcaacccgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 41781000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 52014283 - 52014160
Alignment:
Q  79 taattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatac 178  Q
    ||||||||||||||||| |||||  |||| ||||  || ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||| |||     
T  52014283 taattacccgtaaatttgaatgggcatgggcacgaatatgggcactgtactacccagccccgcaacccgcatatatgtatttatataatatgatagataa 52014184  T
Q  179 tttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||||| ||||    
T  52014183 tttatttatttttggtgtaaaatt 52014160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 2720857 - 2721010
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| ||||||||| |||||||||| | ||||||||||| | ||| |  ||||| ||||||| ||||  ||| || ||||| || || ||||    
T  2720857 ccacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacttgggtacgggtaat-acccacaaaattaaatgggtacgggcacg 2720955  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    ||||||||||||||| |||| || |||||||||||||| || |||||||||||||    
T  2720956 ggtaagggtactatattacccagacccgcaacccgcatatacatatttatataat 2721010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 9609500 - 9609334
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||||||||||||||||  ||||| ||||| |||| |  ||||   | |||||||||| || ||| | ||| |||||   |||||||  | |||||||    
T  9609500 caatggatagggtaaaaccctgctttcatgggcatggacttgggtccagataattacccgcaattttaagtgggtatgggtgcgggtaaaagcactatac 9609401  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtg 195  Q
    |||||||| ||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||    
T  9609400 tacctagctccgcaacccgcatatacatattcatataatataataaatactttatttatttttggtg 9609334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 12188255 - 12188102
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| ||||||||| |||||||||| | ||||||||||| | ||| |  ||||| ||||||| ||||  ||| || ||||| || || ||||    
T  12188255 ccacaaaaaatatccacaatgggtagggtaaaaacccgcttttatggatctggacttgggtacgggtaat-acccacaaaattaaatgggtacgggcacg 12188157  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    ||||||||||||||| |||| || |||||||||||||| || |||||||||||||    
T  12188156 ggtaagggtactatattacccagacccgcaacccgcatatacatatttatataat 12188102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 22306310 - 22306487
Alignment:
Q  12 atccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggaca 110  Q
    |||| |||||| ||||  |||||| ||||||||| || |||||| ||||||||||||| | ||  | ||||||||||| ||| || || || || |||||    
T  22306310 atccgcaaaaattacctgcaatgggtagggtaaatccccgctttcatgggtatgggcatgagtccgagtaattacccgcaaacttaaaagggtacggaca 22306409  T
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||||| ||  ||||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  22306410 cgggtatggacactatactacccatccccgcaacccgcacatatgtatttatataatataataaataatttatatatt 22306487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 2224588 - 2224757
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||| |||| ||| |||       |||||  ||| ||  |||| ||||| ||||||||    
T  2224588 caaaaaatatccacaatggatagggtaaaacccctcttttatgggtctgggtacgagtaa------tacccacaaaattatatgggtatgggcacgggta 2224681  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  2224682 agggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 2224757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 8066442 - 8066268
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||| || ||||||||| |||||| |||||  |||  | ||||| ||||| |||||||    
T  8066442 caaaaaatacccacaatggatagggtaaaatcccgc-tttatgggtctgagcacgggtacgggtaa-tacccacaaaactaaatgggtatgggcacgggt 8066345  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||| |  | || |||| || |||| || || ||||||||||||| | ||||||  |||||||||||||    
T  8066344 aagggtactatattgtccagacccgtaaccccgtatatacatatttatataatatcataaattatttatttattttt 8066268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 14595708 - 14595628
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || ||||||||| |||| || ||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  14595708 actatactacccagtcccgcaacctgcatatacatatttatataatataataaatattttatttatttttgatgtacaatt 14595628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 26339915 - 26339991
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||||||||||||| ||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  26339915 tactacccagccccgcaacccacatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 26339991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 54932370 - 54932545
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||| ||||||| |||| ||||| | ||||||||||||| ||||||| |||| |||||| |||||  ||| || |||||| |||| |||||||    
T  54932370 caaaaaatacctacaatgggtaggataaaatcccgcttttatgggtctgggcactggtacgggtaa-tacccacaaaattaaatggacatgggcacgggt 54932468  T
Q  116 aagggtactatactacctagccccgcaacc-cgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||  |||||||||| || || | ||||||| | ||| || ||||||||||||| | ||||||  |||||||||||||    
T  54932469 aacagtactatactgcccagactcgcaacctcacatatacatatttatataatatcataaattatttatttattttt 54932545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 54978783 - 54978894
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  54978783 caaaaaatacccacaatgggtagg-taaaaccccgcttttatgggtctgggcacaggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 54978880  T
Q  116 aagggtactatact 129  Q
    ||||||| ||||||    
T  54978881 aagggtattatact 54978894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 22313055 - 22313167
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    ||||| ||||| ||||||||||||||||||||||||||   | |||||||||| ||||||| || |||||||| |||| | |||| || |||||||||||    
T  22313055 aatttaaatgggtatggacacgggtaagggtactataccgtccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttattt 22313154  T
Q  190 ttggtgtacaatt 202  Q
    || ||||| ||||    
T  22313155 ttagtgtataatt 22313167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 51806472 - 51806655
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||  ||||  |||||||||||| | |||||||||||||||||  ||||  || |||||||||| || |||  |||||||| |   | | |    
T  51806472 caaaaaatacccgtaatgagtagggtaaaaccccacttttatgggtatgggcttgggtccggataattacccgcaattttagatggatattggtgcagat 51806571  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtaca 199  Q
    | |   ||||||||||| |||||||||| |||||| || ||||||||||||| ||||| | | |||||||||||||| ||||||    
T  51806572 atgaacactatactacccagccccgcaatccgcatatacatatttatataatataatacaaattttatttatttttgatgtaca 51806655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 3386851 - 3386909
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta 75  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||    
T  3386851 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggttcgggcacgggta 3386909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 202
Target Start/End: Original strand, 21297052 - 21297180
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatat--atttatataatgtaata 173  Q
    ||||||||||||| |||||| ||||||||||  ||||  || |   ||| ||||||| | ||||||||||||||| ||| |  ||||||||||| | |||    
T  21297052 gggtaattacccgcaaatttgaatggatatgtgcacgaatatgaacactgtactacccaaccccgcaacccgcatatatgtgtatttatataatatgata 21297151  T
Q  174 aatactttatttatttttggtgtacaatt 202  Q
    |||| ||||||||||||| ||||||||||    
T  21297152 aataatttatttattttttgtgtacaatt 21297180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 33983549 - 33983436
Alignment:
Q  90 aaattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||||| ||||| ||||  ||||||||||||||||||||| || |||||| ||| ||||||| || |||||||| |||| | |||| || ||||||||||    
T  33983549 aaatttaaatgggtatgagcacgggtaagggtactatactgcccagccccacaaccccgcatatacatatttatttaatatcataagtaatttatttatt 33983450  T
Q  189 tttggtgtacaatt 202  Q
    ||| ||||| ||||    
T  33983449 tttagtgtataatt 33983436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 196
Target Start/End: Original strand, 1730666 - 1730856
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| |||| | |||| | || | ||||||  ||||||| ||||   ||||| | |||| |    
T  1730666 atggatatccacataaaatacccacaatgggtagggtaaaaccccgctatcatggatctgag-acgggttcgggtaat-acccacgaatttaattggaga 1730763  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgt 196  Q
    |||  || |||||| |||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||    
T  1730764 tgggtacaggtaagagtactatactgcccagccccgcaaccccgcatatacatatttatttaatattataagtaatttatttatttttagtgt 1730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 7117641 - 7117757
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaa 175  Q
    ||||||||||| | |||||| ||||| |||||    |||||||||||||||||| || || || |||||||| || || ||||||||| ||| |||||||    
T  7117641 gggtaattacctgcaaatttaaatgggtatgggtgtgggtaagggtactatactgcccagacctgcaacccgtatatacatatttatacaatataataaa 7117740  T
Q  176 tactttatttatttttg 192  Q
    || ||| ||||||||||    
T  7117741 taatttgtttatttttg 7117757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 23349156 - 23349276
Alignment:
Q  31 aatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatact 129  Q
    ||||| |||||||||||  ||||||  |||||||||||| ||||  ||||||||||||| ||| || || || || || |||||||| ||| ||||||||    
T  23349156 aatgggtagggtaaaactccgctttcgtgggtatgggcatgggtccgggtaattacccgcaaacttaaaagggtacgggcacgggtatgggcactatact 23349255  T
Q  130 acctagccccgcaacccgcat 150  Q
    ||| |||||||||||| ||||    
T  23349256 acccagccccgcaacctgcat 23349276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 44810109 - 44810029
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| ||||| ||||||| ||  |  ||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  44810109 actatactacccagccctgcaacccacacatgcatatttatataatataataaatattttatttatttttgttgtacaatt 44810029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 46030684 - 46030503
Alignment:
Q  19 aaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    ||||| ||||||||| ||||  |||||||  ||||||||||| |||||| ||||||  | |||| ||||  ||||| | |||| ||| | ||||||||||    
T  46030684 aaaaaaacccacaatagataatgtaaaactccgcttttatggatatgggtacgggtccg-taat-acccacaaattgttatgggtataggcacgggtaag 46030587  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||| | |||||||| ||||| | || |||||| |||||| |  ||||||  |||||||||||||||||| ||||    
T  46030586 ggtactatactacccaaccccgcaaccccgcgtatacatatttgtataatattttaaata-attatttatttttggtgtataatt 46030503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 2073324 - 2073437
Alignment:
Q  90 aaattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||||| ||||| ||||| ||||||||||||||||||||| || || ||||||| ||||||| || |||||||| |||| |  ||  || ||||||||||    
T  2073324 aaatttaaatgggtatgggcacgggtaagggtactatactgcccaggcccgcaaccccgcatatacatatttatttaatatcttaggtaatttatttatt 2073423  T
Q  189 tttggtgtacaatt 202  Q
    ||| ||||| ||||    
T  2073424 tttagtgtataatt 2073437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 8805594 - 8805675
Alignment:
Q  110 acgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||| ||| ||| ||||||| |||||| |||||||||| ||| |||||||||||| | ||||||| |||||||| ||||    
T  8805594 acgggtatgggcactctactacccagccccacaacccgcatatatgtatttatataatattataaataatttatttactttt 8805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 28928248 - 28928396
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||| ||||||||| |||||||||||| |||| |||||||| |||| || | |  ||||||| ||||   ||||| ||||| ||||| ||||||||||    
T  28928248 aaaatatccacaatgggtagggtaaaaccccgctattatgggtttggggacagatccgggtaat-acccacgaatttaaatgggtatgggcacgggtaag 28928346  T
Q  119 ggtactatactacctagccccgcaaccc-gcatgtatatatttatataat 167  Q
    ||||||||||| |  || |||||||||| |||| || |||||||| ||||    
T  28928347 ggtactatactgcacagtcccgcaaccctgcatatacatatttatttaat 28928396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 56444828 - 56444896
Alignment:
Q  134 agccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||| |||  ||||||||||| | ||| ||| ||||||||||||||||||| ||||    
T  56444828 agccccgcaacccgcatatatgaatttatataatatgatagataatttatttatttttggtgtaaaatt 56444896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 7250296 - 7250374
Alignment:
Q  90 aaattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataat 167  Q
    |||||| ||||| ||||| ||||||||| ||||||||||| || |||| ||||| ||||||| ||||||||||| ||||    
T  7250296 aaatttaaatgggtatgggcacgggtaaaggtactatactgcccagcctcgcaaccccgcatatatatatttatttaat 7250374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 8614960 - 8614839
Alignment:
Q  81 attacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactt 180  Q
    |||||||| |||||| ||| | ||| || |||| ||||||||||||| |  | |||||| |||||| ||| || ||||||||||||  | ||||||| ||    
T  8614960 attacccgcaaatttaaattggtatagatacggataagggtactatattgtccagccccacaacccacatatacatatttatataaaatgataaataatt 8614861  T
Q  181 tatttatttttggtgtacaatt 202  Q
    |||||||| ||| |||| ||||    
T  8614860 tatttattcttgatgtataatt 8614839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 26337236 - 26337341
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| ||||||||||||  ||||| ||||||  ||||  ||||| ||||||||||||| ||||||  |||| ||||| |||||||    
T  26337236 caaaaaatacccgctatgggtagggtaaaaccctgctttcatgggtccgggcttgggtatgggtaattacccgcaaatttatatgggtatgggcacgggt 26337335  T
Q  116 aagggt 121  Q
    | ||||    
T  26337336 atgggt 26337341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 44292736 - 44292817
Alignment:
Q  121 tactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||  | |||||| ||||| | || || ||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  44292736 tactatactgtccagccccacaacctgtatatacatatttatataatattataaataatttatttatttttggtgtataatt 44292817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 38444288 - 38444213
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    ||||| ||||| |||||  |||||||||||||||||||| || ||||||||||||| ||  ||||||||||| ||||    
T  38444288 aatttaaatgggtatgggtacgggtaagggtactatactgcccagccccgcaaccc-cacatatatatttatttaat 38444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 8643961 - 8644048
Alignment:
Q  115 taagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||| | || |  ||| |||||||||| || ||||||||||||  | ||||||| |||||||||| |||||||| ||||    
T  8643961 taagggtactatattgcccaatcccacaacccgcatatacatatttatataaaatgataaataatttatttattcttggtgtataatt 8644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 13082554 - 13082511
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatata 165  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  13082554 actatactacccagccccgcaacccgcatatatgtatttatata 13082511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 7262506 - 7262440
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||||||||||| |||| |||||||| ||| ||| | |||||||||| ||||||||| ||||| ||||    
T  7262506 actatactacccagccacgcaacccacatatatgtttttatataatataataaataatttatatatt 7262440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 27586329 - 27586371
Alignment:
Q  155 atatttatataatgtaataaatactttatttatttttggtgta 197  Q
    ||||||||||||| | ||||||| |||||||||||||||||||    
T  27586329 atatttatataatatcataaataatttatttatttttggtgta 27586371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 50981290 - 50981364
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcat 150  Q
    |||||||||||| ||||||| |  || |||||   |||||||||| ||| ||||||| |||||||||||||||||    
T  50981290 gggtaattacccataaatttaagcgggtatgggtgcgggtaagggcactttactacccagccccgcaacccgcat 50981364  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 8589440 - 8589504
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggca 69  Q
    |||||||| || ||||||||| || |||||| |||||||||||| |||||| || | ||||||||    
T  8589440 gatggacacccgcaaaaaatagccgcaatgggtagggtaaaaccccgctttcatagatatgggca 8589504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 4892913 - 4893098
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  4892913 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 4893012  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4893013 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 4893098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 29185574 - 29185389
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  29185574 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 29185475  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29185474 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 29185389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 33362516 - 33362701
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||| ||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  33362516 caaaaaatacccacaatgggtaggataaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 33362615  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33362616 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 33362701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 20415454 - 20415270
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  20415454 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtatgggcacgggtagggtaattacccgcaaattttaatgggtatggacacgggta 20415355  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  20415354 agggtactatactacccagccccgcaacccg-atgtacatatttatataatataataaatactttatatatttttggtgtacaatt 20415270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 30490135 - 30489950
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||| | ||||||||| || |||||||||||||||||||  ||||  ||||||||||||| ||||||  |||| ||||||  |||||    
T  30490135 caaaaaatacccacaataggtagggtaaaccc-cgcttttatgggtatgggcttgggtccgggtaattacccgcaaatttagatgggtatggatgcgggt 30490037  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| ||||||| |||||| ||||||||||||||| || ||||||||||||| || |||||| ||||||||||||||||||| ||||    
T  30490036 aaggatactatattacctaaccccgcaacccgcatatacatatttatataatatactaaatattttatttatttttggtgtataatt 30489950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 14106799 - 14106602
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    ||||||| || |||||||  ||| |||||| |||||||||||| |||||| ||| ||||||||  ||||  ||||||||||||| |||||||||||| ||    
T  14106799 atggacacccgcaaaaaaaccccgcaatgggtagggtaaaaccccgctttcatgagtatgggcttgggtccgggtaattacccgcaaattttaatgggta 14106700  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||   ||| |||||||||||||||| | ||||||||||||| ||| |  ||||||||||||| || ||||||||||||||||||||| |||||||||    
T  14106699 tgggtgcggataagggtactatactatccagccccgcaacccacatatgcatatttatataatatattaaatactttatttatttttgatgtacaatt 14106602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 3191730 - 3191903
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||| |||||||||| | |||||||||  ||||||||  ||||  || |||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  3191730 caatgggtagggtaaaatcccgcttttattagtatgggcttgggtccggataattacccgcaaattttaatggatatgggcgcgggtaagggtactatac 3191829  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| || ||   ||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  3191830 tacccagacctaaaacccgcatatacatatttatataatataataaatattttatttatttttggtgtataatt 3191903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 3200548 - 3200721
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||| |||||||||| | |||||||||  ||||||||  ||||  || |||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  3200548 caatgggtagggtaaaatcccgcttttattagtatgggcttgggtccggataattacccgcaaattttaatggatatgggcgcgggtaagggtactatac 3200647  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| || ||   ||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  3200648 tacccagacctaaaacccgcatatacatatttatataatataataaatattttatttatttttggtgtataatt 3200721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 3209385 - 3209558
Alignment:
Q  30 caatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggtaagggtactatac 128  Q
    |||||| |||||||||| | |||||||||  ||||||||  ||||  || |||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  3209385 caatgggtagggtaaaatcccgcttttattagtatgggcttgggtccggataattacccgcaaattttaatggatatgggcgcgggtaagggtactatac 3209484  T
Q  129 tacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| || ||   ||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  3209485 tacccagacctaaaacccgcatatacatatttatataatataataaatattttatttatttttggtgtataatt 3209558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 28192063 - 28192260
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggata 104  Q
    ||||||| || |||||||||||||| |||| |||||||||||| |||||| ||||||  || |  ||||| || |||||||||||||||||  |||| ||    
T  28192063 atggacacccgcaaaaaatacccactatgggtagggtaaaaccccgctttcatgggtccggacttgggtatggataattacccgtaaatttatatgggta 28192162  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||  || |||| ||| ||| ||||||| ||||| ||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  28192163 tgggtacaggtatgggcactgtactacccagccctgcaacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 28192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 9222718 - 9222543
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  9222718 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 9222620  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  9222619 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 9222543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 13313210 - 13313035
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  13313210 caaaaaatacccacaatgggtagggtaaaaccccgcttttctgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 13313112  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  13313111 aagggtactatactgcccagacccgcagacccgcatatacatatttatataatatcataaattatttatttattttt 13313035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 42068759 - 42068933
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| |||||||||||   |||||||| ||| ||||||| ||||  ||| || |||||||||| ||||||||    
T  42068759 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggacttgggcacgagtacgggtaat-acccacaaaattaaatggatatgtacacgggt 42068857  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||||||||||| || ||||||||||||| | ||||||  ||||||| |||||    
T  42068858 aagggtactatactgcccagacccgcaacccgcatatacatatttatataatatcataaattatttatttcttttt 42068933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 35738590 - 35738776
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| |||||   ||||  ||||| ||||||||||||| ||||||  |||| ||||| |||||||    
T  35738590 caaaaaatacccgctatgggtagggtaaaaccccgctttcatggggccgggcttgggtatgggtaattacccgcaaatttatatgggtatgggcacgggt 35738689  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| | | ||||||| ||||||||||||||||| | | |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  35738690 atgggcaatgtactacccagccccgcaacccgcatatgtgtatttatataatattataaataatttatttatttttggtgtacaatt 35738776  T

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Target: chr1; HSP #15
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 40093885 - 40094069
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    |||||| |||| |||||| ||||| |||||| ||||||||| || |||||| ||||||||||||| ||||  ||||||||| ||| ||| || || ||||    
T  40093885 gatggatatccgcaaaaattacccgcaatgggtagggtaaatccccgctttcatgggtatgggcatgggttcgggtaattatccgcaaacttaaaaggat 40093984  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    | ||||||||||| ||| ||||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  40093985 acggacacgggtatgggcactatactacccatccccgcaacccgcacatatgtatttatataatataataaataatttatatatt 40094069  T

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Target: chr1; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 32133994 - 32133808
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| || |||||| |||||||||||| |||||| ||||||  || |  ||||| ||||||||||||| ||||||   ||| ||||| |||||||    
T  32133994 caaaaaatatccgcaatgggtagggtaaaaccccgctttcatgggtccggacttgggtatgggtaattacccgcaaatttatttgggtatgggcacgggt 32133895  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| ||||| ||||||| ||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  32133894 atgggcactgtactacccagccctgcaacccacatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 32133808  T

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Target: chr1; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 46772037 - 46772223
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||| |||||||||| |||||   ||||||||||||||||||   ||||  || |||||| | | ||||||  |||| |||||    ||||    
T  46772037 caaaaaatacccataatggataggataaaattccgcttttatgggtatgggtttgggttcggataattatcagcaaatttagatgggtatgggtgtgggt 46772136  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||||||||||| ||||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  46772137 aagggcactatactacccagccccgcaacccgcatatacatatttagataatataataaatattttatttatttttggtgtacaatt 46772223  T

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Target: chr1; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 236990 - 236804
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||  |||||| |||||  |||||| ||||| ||||| |||||||    
T  236990 caaaaaatacccacaatgggtagggtaaaaccccgctttcatgggtttgggcacgggtccgggtaa-tacccacaaatttaaatgggtatgggcacgggt 236892  T
Q  116 aagggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttt-tggtgtacaatt 202  Q
    |||| |||||||||||| |||||||||||||  ||| || | ||||||||||| | ||| ||| |||||||||||| ||||||| ||||    
T  236891 aaggttactatactacccagccccgcaaccctacatataca-atttatataatatcatagataatttatttattttgtggtgtataatt 236804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 44327564 - 44327739
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  44327564 caaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 44327662  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    || ||||||||| | || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  44327663 aatggtactatattgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 44327739  T

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Target: chr1; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 19506855 - 19506678
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    ||||||||||||||||||||||||||||| |||| | |||||| |||| ||||||  ||||||| ||||   ||||||||||| ||||| ||||| ||||    
T  19506855 aaaatacccacaatggatagggtaaaaccccgctatcatgggtctggggacgggtccgggtaat-acccacgaattttaatgggtatgggcacggataag 19506757  T
Q  119 ggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    | ||||||||| || ||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| |||||    
T  19506756 gatactatactgcccagccccgcaccccgcatatacatatttatttaatatcataactaatttatttatttttagtgta 19506678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 27783978 - 27783825
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||| | ||| || ||||| ||||||| ||||  ||| || ||||| || || ||||    
T  27783978 ccacaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatttggacatgggtacgggtaat-acccacaaaattaaatgggtacgggcacg 27783880  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    |||||||||||||||||||| || |||||||||||||| || |||||||||||||    
T  27783879 ggtaagggtactatactacccagacccgcaacccgcatatacatatttatataat 27783825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 29054237 - 29054412
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||| |||| ||||||| ||  | |||||  ||| || |||||  |||| ||||||||    
T  29054237 caaaaaatacctacaatgggtagggtaaaaccccgcttttatgggtctgggtacgggtacggataatacccacaaaattaaatgggcatgggcacgggta 29054336  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || |  ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  29054337 agggtactatactgcccaaacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 29054412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 7815375 - 7815191
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||  |||||| |||||||||||  ||||||||||| |||| |   ||||  ||||||||||| | ||| || ||||| |||||   |||||    
T  7815375 caaaaaatacctgcaatgggtagggtaaaactccgcttttatggatatgagtttgggtccgggtaattacc-gcaaactt-aatgggtatgggtgcgggt 7815278  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| ||||||||| || ||||||||||||||||| || ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  7815277 aaggatactatacttcccagccccgcaacccgcatatacatatttatataatataataaatattttattaatttttggtgtacaatt 7815191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 25814965 - 25815132
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||| |||| ||||||| |||||| |||||  ||| || ||||| |||||||||||||    
T  25814965 caaaaaatatccacaatgggtagggtaaaaccccgcttttatgggtctgggtacgggtacgggtaa-tacccacaaaattaaatgggtatggacacgggt 25815063  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  25815064 aagggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 25815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 47665872 - 47665683
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    ||||||||||||||| | |||| ||||||||||   |||||| ||||||  ||||  ||||| ||||||||||||| ||| ||  |||| ||||| || |    
T  47665872 ccacaaaaaatacccgctatgggtagggtaaaataccgctttcatgggtccgggcttgggtatgggtaattacccgcaaaattatatgggtatgggcatg 47665773  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | || ||| ||| | ||||| |||||||| |||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  47665772 gatatgggcactgtgctacccagccccgccacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 47665683  T

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Target: chr1; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 29425815 - 29425999
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggat 103  Q
    |||||||| || |||||||||||| ||||||||||||||||||| |||||| || | |||||||| || |  ||||||||||| | ||| || || || |    
T  29425815 gatggacacccgcaaaaaatacccgcaatggatagggtaaaaccccgctttcatagatatgggcatggctccgggtaattacctgcaaacttaaaagggt 29425914  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    | || |||||||| ||| ||||||||||| ||| ||||||||| ||| ||| | |||||||||| ||||||||| ||||| ||||    
T  29425915 acgggcacgggtatgggcactatactacccagctccgcaacccacatatatgtttttatataatataataaataatttatatatt 29425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 35978141 - 35978316
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||  |||||||| |||||||||| | ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  35978141 caaaaaatattcacaatgggtagggtaaaatcccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 35978239  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    || ||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  ||| |||||||||    
T  35978240 aatggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttttttattttt 35978316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 2978889 - 2978706
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaagg 119  Q
    |||||||||| |||||||||||||||||| |||| | |||||| |||| ||||||  ||  | |||||   ||||||||||| ||||| ||||||||| |    
T  2978889 aaaatacccataatggatagggtaaaaccccgctatcatgggtctggggacgggtccggataatacccacgaattttaatgggtatgggcacgggtaaag 2978790  T
Q  120 gtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||| || |||||||||| ||||||| || |||||||| |||| | |||  || ||||||||||||| ||||| ||||    
T  2978789 gtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcatatgtaatttatttatttttagtgtataatt 2978706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 195
Target Start/End: Complemental strand, 9473477 - 9473303
Alignment:
Q  21 aaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaaggg 120  Q
    ||||| ||||||||| |||| ||||||  | |||| ||||||||||||  ||   |||||||||| || |||||| | ||| |||||     ||||||||    
T  9473477 aaatatccacaatgggtaggataaaactccactttcatgggtatgggctgggcccgggtaattactcgcaaatttaagtgggtatgggggttggtaaggg 9473378  T
Q  121 tactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtg 195  Q
    || ||||||||| ||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||    
T  9473377 tattatactacccagccccgcaacccgcatatacatatttatataatttaaaaattactttatttatttttggtg 9473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 4051914 - 4052100
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatg----ggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||| || |||||| |||||||||||| ||||||||||    ||||||| |  ||||  ||||||||||| | ||||||  |||| ||||    ||    
T  4051914 aaaaaatatccgcaatgggtagggtaaaaccccgcttttatgcatgggtatggacttgggtccgggtaattacctgcaaatttagatgggtatgagtgcg 4052013  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtaca 199  Q
    | |||||| ||||||||||| ||||||||||||||||| |  ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  4052014 gataagggcactatactacccagccccgcaacccgcatatgcatatttatataatataataaatattttatctatttttggtgtaca 4052100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 28221439 - 28221267
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||| ||||||||| |||||||||||| |||| | |||||| |||| ||||||  ||||||| ||||  |||||| ||||| ||||| |||| |||||    
T  28221439 aaaatagccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgggtaat-acccacaaatttaaatgggtatgggcacgagtaag 28221341  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || |||||||||||||    
T  28221340 ggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttattttt 28221267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 43634169 - 43634320
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||| | |  ||||||||||  ||||||||| ||| ||| |||||||| |||||| |||||  ||| || ||||||||||| |||||||    
T  43634169 caaaaaatacccacattaggcagggtaaaactccgcttttataggtctggacacgggtacgggtaa-tacccacaaaattaaatggatatgggcacgggt 43634267  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataat 167  Q
    |||||||||||||| ||||| ||||||| ||||||| || |||||||||||||    
T  43634268 aagggtactatactgcctagacccgcaaccccgcatatacatatttatataat 43634320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 48663246 - 48663086
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||| ||||| |||||| | ||||||| || |||||||||||||||||||| ||||  ||||||||||||| ||| || || |  || |||||||| |    
T  48663246 caaaaattacccgcaatgggtcgggtaaatccccgcttttatgggtatgggcatgggtccgggtaattacccgcaaacttaaaagagtacggacacggat 48663147  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaat 176  Q
    | ||| ||||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||    
T  48663146 acgggcactatactacccatccccgcaacccgcacatatgtatttatataatataataaat 48663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 48964006 - 48964175
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||| |||||| || |||||||||||| ||||||||||||| ||||||||||||       |||||  ||| || ||||| ||||| ||| ||||    
T  48964006 caaaaaatatccacaaagggtagggtaaaaccccgcttttatgggtctgggcacgggtaa------tacccacaaaattaaatgggtatgggcacaggta 48964099  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  48964100 agggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 48964175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 945958 - 945769
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    ||||| |||||| ||||||||| ||| |||||||| |||| | |||||| |||| ||||||  ||||||| ||||   ||||||||||| ||||| ||||    
T  945958 ccacataaaatatccacaatgggtagagtaaaaccccgctatcatgggtctggggacgggtccgggtaat-acccacgaattttaatgggtatgggcacg 945860  T
Q  113 ggtaagggtactatactacctagccccgcaac-ccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||  |||||| ||||| |||||||| |||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  945859 ggtaagggtcttatactgcctagacccgcaactccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 945769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 2433686 - 2433501
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||| ||||| | || ||| ||| |||||| || ||||  ||  | |||||  ||||| | |||| ||||| ||||||||    
T  2433686 caaaaaatacccacaatgggtaggataaaatcccgttttcatgagtatggacatgggtccggataatacccacaaattgttatgggtatgggcacgggta 2433587  T
Q  117 agggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||| |  ||||||  |||||||||||||||||| ||||    
T  2433586 agggtattatactacccaggcccgcaaccctgcatatatatatttatataatattttaaata-attatttatttttggtgtataatt 2433501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 33794048 - 33794214
Alignment:
Q  19 aaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||      | |||||  ||| || ||||| || || ||||||||||    
T  33794048 aaaaatacccacaatggatagggtaaaactccgcttttatgggtatgggcacgggt------aatacccacaaaattaaatgggta-gggcacgggtaag 33794140  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
     |||||||||| || |  ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  33794141 agtactatactgcccaaacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 33794214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 16176736 - 16176814
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaa 200  Q
    ||||||||||| |||||| |||||||||| || ||||||||||||| ||||||||| |||||||||||||| |||||||    
T  16176736 actatactacccagccccacaacccgcatatacatatttatataatataataaatattttatttatttttgatgtacaa 16176814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 34321516 - 34321336
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||| ||| |||||||||||||||| | ||||||||||| |||||||  ||||  |||||||||||| ||| ||  |||| || | |  ||||||    
T  34321516 caaaaaatatccataatggatagggtaaaatcccgcttttatggatatgggcttgggtccggtaattacccgcaaacttatatgggtaggaatgcgggta 34321417  T
Q  117 agggtactatactac---ctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggt 194  Q
    |||  | ||||||||   |||| || |||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||    
T  34321416 aggacattatactactacctagtcctgcaacctgcatatacatatttatataatataataaatattttattaatttttggt 34321336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 48514958 - 48514773
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| || | ||||||||||||||||| |||||| |||| |  | ||  || || | ||||||||||| ||||||  |||  ||| |||||||||    
T  48514958 caaaaaatatccgctatggatagggtaaaaccccgctttcatggatccgagcttggatatgagtaattacccgcaaatttgtatgagtatagacacgggt 48514859  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
      ||| ||| ||||||| ||||||||||||||||| ||| ||||||||| || | ||||||| ||||||||||||||||||| ||||    
T  48514858 ttgggcactgtactacccagccccgcaacccgcatatatgtatttatat-atattataaataatttatttatttttggtgtaaaatt 48514773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 32835147 - 32835313
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtag-ggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||||  |||| | |||||| |||| ||||||   |||||| ||||   ||||| ||||||||| | ||||||||||    
T  32835147 aaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccaggtaat-acccacgaatttaaatggatataggcacgggtaag 32835245  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttattt 185  Q
    ||||||||||| || |||||||||| ||||||| || |||||||| |||| | |||| || |||||||    
T  32835246 ggtactatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttattt 32835313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 38491893 - 38491727
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| ||||||||||||   || | ||||||||||| | ||||  ||||||| ||||   ||||| ||||||||||| ||||||||||    
T  38491893 aaaatacccacaatgggtagggtaaaaccctactatcatgggtatggggaagggtccgggtaat-acccacgaatttaaatggatatgggcacgggtaag 38491795  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttattt 185  Q
    ||||||||||| || ||||  |||| ||||||| ||||||||||| |||| | |||| || |||||||    
T  38491794 ggtactatactgcccagccatgcaaccccgcatatatatatttatttaatattataagtaatttattt 38491727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 611195 - 611045
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||||| | | ||||| ||| |||||||  |||||| |||| |||||||||||||  ||  | ||||||||||||| ||||| |||||| | || |||    
T  611195 aaaaaatatctataatgggtagagtaaaactccgctttcatggatatgggcacgggtccgggtagtacccgtaaatttaaatgggtatggatatggataa 611096  T
Q  118 gggtactatactacctagccccgcaa-cccgcatgtatatatttatataat 167  Q
    || |||||||||||| || ||||||| ||||||| || |||||||||||||    
T  611095 ggatactatactacccagtcccgcaaccccgcatatacatatttatataat 611045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 22579873 - 22579963
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| |||||||||||| || ||||||||||||||||| || |||||||||| || | ||||||| |||||| |||||||||||| ||||    
T  22579873 gggtatgggtactatactgcccagccccgcaacccgcatatacatatttatattatatgataaataatttattaatttttggtgtataatt 22579963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 31645908 - 31645990
Alignment:
Q  106 ggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||||||||||| ||| ||||||||||| | ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||    
T  31645908 ggacacgggtatgggcactatactacccatccccgcaacccgcacatatatatttatataatataataaataatttatatatt 31645990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 25059578 - 25059390
Alignment:
Q  15 cacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtag-ggtaattacccgtaaattttaatggatatggacacgg 113  Q
    |||| |||||||| ||||||| |||||||||||| |||| | ||||||  ||| | ||||   |||||| ||||   ||||||||||||||||| |||||    
T  25059578 cacataaaatacctacaatgggtagggtaaaaccccgctatcatgggttcggggatgggtccaggtaat-acccacgaattttaatggatatgggcacgg 25059480  T
Q  114 gtaagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| || || || |||  ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  25059479 gtaagggtactatactgcccagacctgcagccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 25059390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 8981263 - 8981373
Alignment:
Q  79 taattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatac 178  Q
    |||||||||  |||||| ||||||||||| |||||||| ||| ||| || |||| |||||||||||| |||| ||| |||||||||||| |  ||||||     
T  8981263 taattacccacaaatttgaatggatatgggcacgggtatgggaactgtattacccagccccgcaacctgcatatatgtatttatataatatgctaaataa 8981362  T
Q  179 tttatttattt 189  Q
    ||| |||||||    
T  8981363 tttgtttattt 8981373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 202
Target Start/End: Complemental strand, 48985609 - 48985483
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaa 175  Q
    ||||||||||||| | |||| ||||  ||||||||||| || ||| ||| ||||| | || ||||||| |||||| ||| | |||||||||| | |||||    
T  48985609 gggtaattacccgcatatttgaatgtgtatggacacggctatgggcactgtactatccagtcccgcaatccgcatatatgtgtttatataatatgataaa 48985510  T
Q  176 tactttatttatttttggtgtacaatt 202  Q
    || ||||||||||||| | ||||||||    
T  48985509 taatttatttattttttgagtacaatt 48985483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 19494884 - 19494724
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    |||||| | |||||||||| |||  |||||| |||||||||| | |||||| |||||| ||| || ||||  ||||||||||||| ||| || || || |    
T  19494884 gatggatacccacaaaaaaaaccg-caatgggtagggtaaaatcccgctttcatgggtctggacatgggtccgggtaattacccgcaaacttaaaagggt 19494786  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatata 165  Q
    |  | |||||||| ||| ||||||||||| ||||||||| ||||||| ||| ||||||||||    
T  19494785 acaggcacgggtatgggcactatactacccagccccgcagcccgcatatatgtatttatata 19494724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 425042 - 424931
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||| ||||||||  |||||||||| | | ||||||||||| |||| ||||||  ||||||| ||||  ||| || ||||||||||| ||||||||    
T  425042 aaaaaatatccacaatgagtagggtaaaatcccacttttatgggtctgggtacgggtccgggtaat-acccacaaaattaaatggatatgggcacgggta 424944  T
Q  117 agggtactatact 129  Q
    |||||||||||||    
T  424943 agggtactatact 424931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 10786582 - 10786490
Alignment:
Q  110 acgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||||||  | | |||||||||||| || || ||||||||||||| | ||| ||| |||||||||||||| |||| ||||    
T  10786582 acgggtaagggtactatactgtccaaccccgcaacccgtatatacatatttatataatatgatagataatttatttatttttgatgtataatt 10786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 39027247 - 39027116
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| ||||||  || |  ||||| |||||||||| || ||||||  |||| ||||| |||||||    
T  39027247 caaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtccggacttgggtatgggtaattactcgcaaatttatatgggtatgggcacgggt 39027148  T
Q  116 aagggtactatactacctagccccgcaacccg 147  Q
    | ||| ||| | ||||| ||||||||||||||    
T  39027147 atgggcactgttctacccagccccgcaacccg 39027116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 40045263 - 40045176
Alignment:
Q  115 taagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||| |||| |||  ||||||||||||||||  || ||||||||| |||||||||| || ||||||||||||| ||||| ||||    
T  40045263 taagggtagtataatactcagccccgcaacccgcacatacatatttatacaatgtaataagtaatttatttattttttgtgtataatt 40045176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 35949148 - 35949297
Alignment:
Q  25 acccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggtaagggtac 123  Q
    |||| |||| |||||||||||||| |||||| |||| |||||||| ||||  |||||| |||||| ||| || || || || || || ||||| ||| ||    
T  35949148 acccgcaatagatagggtaaaaccccgctttcatggatatgggcatgggtccgggtaactacccgcaaacttaaaagggtacgggcatgggtatgggcac 35949247  T
Q  124 tatactacctagccccgcaacccgcatgtatatatttatataatgtaataa 174  Q
    ||||||||| ||||| ||||| ||||| ||| | |||||||||| ||||||    
T  35949248 tatactacccagccctgcaactcgcat-tatgtttttatataatataataa 35949297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 13796787 - 13796890
Alignment:
Q  98 atggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgt 196  Q
    |||| ||||| ||||||||||| |||||||||||  |||||||||| ||||||| || ||||||||||||| |  ||||||  |||||||||||||||||    
T  13796787 atgggtatgggcacgggtaagg-tactatactacaaagccccgcaaccccgcatatacatatttatataatattttaaata-attatttatttttggtgt 13796884  T
Q  197 acaatt 202  Q
    | ||||    
T  13796885 ataatt 13796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 19996327 - 19996425
Alignment:
Q  31 aatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaagggtactatact 129  Q
    ||||| |||||||||||  |||| | |||||| |||| ||||||  ||  |||||||  |||||| ||||| |||||||||||||||| ||||||||||    
T  19996327 aatgggtagggtaaaactccgctatcatgggtctggggacgggttcgggtattacccacaaatttaaatgggtatggacacgggtaagagtactatact 19996425  T

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Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 31107410 - 31107472
Alignment:
Q  140 gcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| |||| || ||||||||| ||| ||||||||| ||||||||||||||||||| ||||    
T  31107410 gcaacctgcatatacatatttatacaatataataaataatttatttatttttggtgtataatt 31107472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 21260456 - 21260566
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    ||||| ||||| ||||| ||||||||| |||||||||||  ||||||| |||| |||| || || |||||||| |||| | |||| || |||||||||||    
T  21260456 aatttaaatgggtatgggcacgggtaaaggtactatact--ctagccctgcaaccccgtatatacatatttatttaatatcataagtaatttatttattt 21260553  T
Q  190 ttggtgtacaatt 202  Q
    || ||||| ||||    
T  21260554 ttagtgtataatt 21260566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 2465310 - 2465398
Alignment:
Q  114 gtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| ||||||||||| || | || | |||||||||| || ||| ||||||||| | ||||||| ||| ||||||||||||||| ||||    
T  2465310 gtaatggtactatactgcccatccacacaacccgcatatacatagttatataatatgataaataatttgtttatttttggtgtataatt 2465398  T

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Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 2974953 - 2975065
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    ||||||||||| ||||| |||||||||  ||||||||||  | ||||||| || ||||||| || |||||||| |||| | |||  || |||||||||||    
T  2974953 aattttaatgggtatgggcacgggtaaatgtactatactgtccagccccgtaaccccgcatatacatatttatttaatatcatatgtaatttatttattt 2975052  T
Q  190 ttggtgtacaatt 202  Q
    || ||||| ||||    
T  2975053 ttagtgtataatt 2975065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 3821035 - 3821098
Alignment:
Q  134 agccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    ||||||||||| || || |  ||||||||||||| | ||||||| |||||||||||||||||||    
T  3821035 agccccgcaactcgtatatgcatatttatataatatgataaataatttatttatttttggtgta 3821098  T

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Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 12560324 - 12560423
Alignment:
Q  93 ttttaatggatatggacacgggtaagggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||| |||||||||  |||  |||||||||||||||| || || | |||||||| |||| || ||||||||||||| | ||||||  |||||||||||||    
T  12560324 tttttatggatatgagcacaagtaagggtactatactgcccagactcgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 12560423  T

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Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 50100311 - 50100172
Alignment:
Q  39 gggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagcc 137  Q
    |||||||||| |||||| |||||| ||| |  ||||  |||| |||||||| |||||| ||||  |||| ||||||||| ||  | | ||||||| | ||    
T  50100311 gggtaaaaccccgctttcatgggtctggacttgggtgtgggttattacccgcaaatttaaatgagtatgaacacgggtatggacattgtactacccaacc 50100212  T
Q  138 ccgcaacccgcatgtatatatttatataatgtaataaata 177  Q
    ||||||| ||||| ||| |||||||||||| | |||||||    
T  50100211 ccgcaactcgcatatatgtatttatataatatgataaata 50100172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 29511954 - 29512040
Alignment:
Q  117 agggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||  || ||||| |||||||||| |||| |  ||||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  29511954 agggtactaccctgcctaggcccgcaaccccgcatatgcatattaatataatatcataaataatttatttatttttggtgtataatt 29512040  T

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Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 32888564 - 32888502
Alignment:
Q  140 gcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || ||||| ||||||| | || |||| |||||||||||||||| |||||||    
T  32888564 gcaacccgcatttacatattcatataatatgatgaataatttatttatttttggtatacaatt 32888502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 7842956 - 7842879
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaac-ccgcatgtatatatttatataat 167  Q
    ||||| ||||||| ||| |||| |||||||||||||||| |  ||||||||||| |||||| || |||||||| ||||    
T  7842956 aatttaaatggatttgggcacgagtaagggtactatactgctcagccccgcaacaccgcatatacatatttatttaat 7842879  T

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Target: scaffold0230 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 27123 - 26938
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  27123 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatgggtatggatacgggta 27024  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27023 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 26938  T

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Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 42096368 - 42096552
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42096368 caaaaaatacccacaatggatagggtaaaccc-cgctttcatggatatgggcacgggtagggtaattacccgcaaattttaatggatatggacacgggta 42096466  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42096467 agggtactatactactcagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 42096552  T

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Target: chr3; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 30247668 - 30247864
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggata 104  Q
    |||||||| || ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||   |||||||||||| ||    
T  30247668 gatggacacccgcaaaaaatacccacaatgggtagggtaaaactccgcttttatgggtatgggcacgggtagggtaattaccac-aaattttaatgggta 30247766  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  30247767 tggacacaggtaagagtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatgtttggtgtacaatt 30247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 45078831 - 45079015
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||    
T  45078831 caaaaaatacccacaacgggtagggtaaaaccccgctttcatgggtatgggcacgggtaggataat-acccgcaaattttaatgggtatggacacgtgta 45078929  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45078930 agggtactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 45079015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 41409883 - 41410068
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||| ||||||| | |||| ||||||| | |||| |||||||||||||||||||| |||||||| || |||||||||||| ||||||||||||||    
T  41409883 caaaaaatatccacaataggtaggataaaaccccactttcatgggtatgggcacgggtagcgtaattactcgcaaattttaatgggtatggacacgggta 41409982  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | |||||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  41409983 aaggtactatactacccagccccgcaacccgcatgtacaaatttatataatataataaatactttatttgtttttggtgtacaatt 41410068  T

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Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 32995767 - 32995570
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    ||||||| ||||||||||||||| | |||| |||||||||||| |||||| ||||||  ||||  ||||| ||||||||||||| ||||||  |||| ||    
T  32995767 atggacacccacaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtcagggcttgggtatgggtaattacccgcaaatttgtatgggta 32995668  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||  |||||||| ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| |||||||||||||| |||||||||    
T  32995667 tgagcacgggtatgggcactgtactacccagccccgcaacccgcatatatgtatttatataatattataaataatttatttatttttgatgtacaatt 32995570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 19619160 - 19618982
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| ||||    
T  19619160 ccacaaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacg 19619062  T
Q  113 ggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  19619061 ggtaagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 19618982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 10084845 - 10085031
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| ||||||  | ||  ||||| ||||||||||||| ||||||  |||| ||||| |||||||    
T  10084845 caaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtccgagcttgggtatgggtaattacccgcaaatttatatgggtatgggcacgggt 10084944  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  10084945 atgggcactgtactacccagccccgcaacccgcatctatgtatttatataatattataaataatttatttatttttggtgtacaatt 10085031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 9162542 - 9162740
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggat 103  Q
    |||||||| | |||||||||| || ||||||||| ||||||| || |||||||||| ||| |||  ||||  | ||||||||||| ||||||  |||| |    
T  9162542 gatggacacctacaaaaaatatccgcaatggataaggtaaaatcttgcttttatggatattggcttgggtccgagtaattacccgcaaatttagatgggt 9162641  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||   ||||||| |||||||||||||| | |||||||||||||||||| || |||||||||| ||||||||| |||||||||||||| |||||||||    
T  9162642 atgggtgcgggtaaaggtactatactacccatccccgcaacccgcatgtacatttttatataatataataaatattttatttatttttgatgtacaatt 9162740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 10191765 - 10191951
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| ||||||  | ||  ||||| ||||||||||||| ||||||  |||| ||||| |||| ||    
T  10191765 caaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtccgagcttgggtatgggtaattacccgcaaatttatatgggtatgggcacgagt 10191864  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  10191865 atgggcactgtactacccagccccgcaacccgcatctatgtatttatataatattataaataatttatttatttttggtgtacaatt 10191951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 28956456 - 28956654
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    |||||||| ||  ||||||||||| |||||| |||||||||||||| | |||||||||||||||  ||||  ||||||||||||| ||||||  |||| |    
T  28956456 gatggacacccgtaaaaaatacccgcaatgggtagggtaaaacctcacatttatgggtatgggcttgggtccgggtaattacccgcaaatttagatgggt 28956555  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||     |||||||| ||||||||||| | ||||||||||| ||| || ||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  28956556 atgggtgtaggtaagggcactatactacccaaccccgcaaccctcatatacatatttaaataatataataaatattttatttatttttggtgtacaatt 28956654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 24987043 - 24987218
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  24987043 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctggacacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 24987141  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  24987142 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 24987218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 36678693 - 36678878
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||| | |||| |||||||||||| |||||| || |||  ||||  ||||| | ||||||| ||| ||||||  |||||||||| ||||||||    
T  36678693 aaaaaatacccgctatgggtagggtaaaaccccgctttcataggtccgggcttgggtatgagtaattatccgcaaatttatatggatatgggcacgggta 36678792  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
     ||| ||||||||||| ||||| ||||||||||| ||| |||||||||||| | ||||||| |||||||||||||| |||||||||    
T  36678793 tgggcactatactacccagccctgcaacccgcatatatgtatttatataatattataaataatttatttatttttgatgtacaatt 36678878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 50480702 - 50480881
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||| | ||| |||||||| |||||| |||||  ||| || ||||| || || ||||    
T  50480702 ccacaaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctggacacgggtacgggtaa-tacccacaaaattaaatgggtacgggcacg 50480800  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgta--ataaatactttatttattttt 191  Q
    |||||||||||||||||||| || |||||||||||||| || ||||||||||||| ||  ||||||  |||||||||||||    
T  50480801 ggtaagggtactatactacccagacccgcaacccgcatatacatatttatataatatatcataaattatttatttattttt 50480881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 39352931 - 39352756
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||| |||| ||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  39352931 caaaaaatacccacaatgggtagggtaaaaccctgcttttatgggtctgggtacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 39352833  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  39352832 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 39352756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 44792274 - 44792449
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||| | ||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  44792274 caaaaaatacccacaatgggtagggtaaaaccccgcttttctaggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 44792372  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  44792373 aagggtactatactgcccagacccgcagacccgcatatacatatttatataatatcataaattatttatttattttt 44792449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 41924441 - 41924266
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||| ||||||| ||||||| ||||  ||| || |||| |||||| |||||||    
T  41924441 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggtacgggtacgggtaat-acccacaaaattaaatgaatatgggcacgggt 41924343  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||| || |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  41924342 aagggtactatactgcccagacccacagacccgcatatacatatttatataatatcataaattgtttatttattttt 41924266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 49360423 - 49360251
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||| || || |||||||    
T  49360423 caaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatgggtacgggcacgggt 49360325  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||||||| || |||||||||||||| || |||||  |||||| | ||||||  |||||||||||||    
T  49360324 aagggtactatactacccagacccgcaacccgcatatacatatt--tataatatcataaattatttatttattttt 49360251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 38694442 - 38694613
Alignment:
Q  32 atggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatacta 130  Q
    |||| |||| ||||||  |||||| ||||||  ||||  ||||| ||||||||||||| ||||||   ||| ||||| |||||||| ||| ||| |||||    
T  38694442 atgggtaggataaaactccgctttcatgggtccgggcttgggtatgggtaattacccgcaaatttatttgggtatgggcacgggtatgggcactgtacta 38694541  T
Q  131 cctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    || ||||||||||||| ||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  38694542 cccagccccgcaacccacatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 38694613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 11672204 - 11672015
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    ||||| |||||||||||||||| |||||||||||| |||| | |||||| |||| ||||||  ||||||| | ||   ||||||||||| ||||| ||||    
T  11672204 ccacataaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgggtaat-atccacgaattttaatgggtatgggcacg 11672106  T
Q  113 ggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||| || || ||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  11672105 ggtaagggtactatactgcccagacccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 11672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 26291353 - 26291551
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggata 104  Q
    ||||||| || |||||||  |||  ||||| |||||||||||  || ||| ||| ||||||||  ||||  | ||||||||||  |||||||||||| ||    
T  26291353 atggacacccgcaaaaaaaccccgtaatgggtagggtaaaactccgttttcatgagtatgggcttgggtccgagtaattaccctcaaattttaatgggta 26291452  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||  |||||||||||||||||||||| | ||| || |||| |||| |  ||||||||||||| || |||||||||||||||||||||||||||||||    
T  26291453 tggatgcgggtaagggtactatactacccaaccctgctaccccgcatatgcatatttatataatatattaaatactttatttatttttggtgtacaatt 26291551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 2012742 - 2012829
Alignment:
Q  115 taagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| ||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||| || |||||||||||||||||||||    
T  2012742 taagggcactatactacccagccccgcaacccgcatatacatatttatataatataataaatatttgatttatttttggtgtacaatt 2012829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 5908753 - 5908568
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| | |||| |||| |  ||||  ||||| | ||||||||||| ||||||  |||| ||| |||||||||    
T  5908753 caaaaaatacccgctatgggtagggtaaaaccccactttcatgg-tccgggcttgggtatgagtaattacccgcaaatttatatgggtatagacacgggt 5908655  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||| | | ||||||||| ||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  5908654 atgggcactgtactatccaaccccgcaacacgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 5908568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 23297967 - 23298150
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||||| | || | |||||| |||| ||| ||  ||||||| ||||  |||||||||||| ||||  ||||||||||    
T  23297967 aaaatacccacaatgggtagggtaaaaccccactatcatgggtctggggacgagtccgggtaat-acccacaaattttaatgggtatgagcacgggtaag 23298065  T
Q  119 ggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || |||||||||  ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  23298066 ggtactatactgcccagccccgcagccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 23298150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 14418612 - 14418499
Alignment:
Q  89 taaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||||||| ||||| |||||  | |||||||||||||||||| || |||||||||||||| || || ||||||||||||| | ||||||| ||||||||||    
T  14418612 taaatttaaatgggtatgggtatgggtaagggtactatactgccaagccccgcaacccgtatatacatatttatataatatgataaataatttatttatt 14418513  T
Q  189 tttggtgtacaatt 202  Q
    |||| |||| ||||    
T  14418512 tttgttgtataatt 14418499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 35688869 - 35688685
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaa-acctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatgga 102  Q
    |||||| |||| |||||| |||||||||||| ||||||||| |||| ||||| ||||||||||||| ||||  ||||||||| ||| ||| || || ||     
T  35688869 gatggatatccgcaaaaattacccacaatgggtagggtaaatacct-gctttcatgggtatgggcatgggtccgggtaattatccgcaaacttaaaaggg 35688771  T
Q  103 tatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    || ||||||||||| ||| ||||||||| | | | ||||||||| ||  ||| |||||||||||| ||||||||| ||||| ||||    
T  35688770 tacggacacgggtatgggcactatactatccatctccgcaacccacacatatgtatttatataatataataaataatttatatatt 35688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 1599777 - 1599981
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-------gggtaattacccgtaaatttta 97  Q
    |||||||| || ||||||||||||  |||||||||| ||||| | ||||||||||||||||||   ||||        ||||||||||| | ||||||      
T  1599777 gatggacacccgcaaaaaatacccgtaatggataggataaaatcccgcttttatgggtatgggtttgggtttgggtccgggtaattacctgcaaatttag 1599876  T
Q  98 atggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtata--tatttatataatgtaataaatactttatttatttttggtg 195  Q
    |||| || ||    |||||| ||||||||| || | ||||| ||||||||||| ||||  |||||||||||| ||||||||| |||||||||||||||||    
T  1599877 atgggtacgggtgtgggtaatggtactatattatccagccctgcaacccgcatatatacatatttatataatttaataaatattttatttatttttggtg 1599976  T
Q  196 tacaa 200  Q
    |||||    
T  1599977 tacaa 1599981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 46819581 - 46819396
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||  ||||||  ||| ||||  || ||||  |||||| ||||| |||||| | ||||||||||  ||||||    
T  46819581 caaaaaatatccacaatgggtagggtaaaactccgctttcttggatatgaacatgggtccgggtaa-tacccataaattgttatggatatgggtacgggt 46819483  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||  |||||||||| ||||||  || ||||||||||||| |  ||||||  |||||||||||||||||| ||||    
T  46819482 aagggtactatactacacagccccgcaaccccgcacatacatatttatataatattttaaata-attatttatttttggtgtataatt 46819396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 5040694 - 5040871
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||| ||||||||| |||||||||||| |||| | |||| | |||| |||| |  ||||||| ||||   ||||||||||| ||||| ||||||||||    
T  5040694 aaaatatccacaatgggtagggtaaaaccccgctatcatggatctggggacggatccgggtaat-acccacgaattttaatgggtatgggcacgggtaag 5040792  T
Q  119 ggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    | ||||||||| || ||||||||| ||| ||| || |||||||| |||| | |||| || ||||||||||||| |||||    
T  5040793 gatactatactgcccagccccgcaccccacatatacatatttatttaatatcataagtaatttatttatttttagtgta 5040871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 27346999 - 27346909
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| |||| || ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  27346999 gggtatgggtgctgtactacccagccccgcaacccgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 27346909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 19455342 - 19455165
Alignment:
Q  12 atccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggaca 110  Q
    |||| |||||| ||||  |||||| ||||||||| || |||||| ||||||||||||| ||||  ||||||||||||| ||| || || || || |||||    
T  19455342 atccgcaaaaattacctgcaatgggtagggtaaatccccgctttcatgggtatgggcatgggtccgggtaattacccgcaaacttaaaagggtacggaca 19455243  T
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||| || ||| |||||| |||  | ||| ||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  19455242 cggatatgggcactataatactcatccctgcaacccgcacatatgtatttatataatataataaataatttatatatt 19455165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 50809276 - 50809147
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||| |||||||| || ||||||||| ||||||||||||| |||| ||| ||| ||  | |||||| ||| || ||||| ||||| ||||||||    
T  50809276 caaaaaatactcacaatgggtaaggtaaaaccccgcttttatgggtctgggtacgagtacggataatacccgcaaaattaaatgggtatgggcacgggta 50809177  T
Q  117 agggtactatactacctagccccgcaaccc 146  Q
    || |||||||||| || || ||||||||||    
T  50809176 agagtactatactgcccagacccgcaaccc 50809147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 50866586 - 50866715
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||| |||||||| || ||||||||| ||||||||||||| |||| ||| ||| ||  | |||||| ||| || ||||| ||||| ||||||||    
T  50866586 caaaaaatactcacaatgggtaaggtaaaaccccgcttttatgggtctgggtacgagtacggataatacccgcaaaattaaatgggtatgggcacgggta 50866685  T
Q  117 agggtactatactacctagccccgcaaccc 146  Q
    || |||||||||| || || ||||||||||    
T  50866686 agagtactatactgcccagacccgcaaccc 50866715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 13735280 - 13735430
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| | ||||||||| | ||||||||||||  ||||| |||||  ||| || ||||| || || ||||| |    
T  13735280 caaaaaatatccacaatgggtagggtaaaaccccacttttatggatctgggcacgggtacaggtaa-tacccacaaaattaaatgggtacgggcacggat 13735378  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataat 167  Q
    || | |||||||||||| || |||||||| ||||| || |||||||||||||    
T  13735379 aatgatactatactacccagacccgcaactcgcatatacatatttatataat 13735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 22844787 - 22844949
Alignment:
Q  31 aatggatagggtaaaacctcgcttttatgggtatgggcacgggtag-ggtaattacccgtaaattttaatggatatggacacgggtaagggtactatact 129  Q
    ||||||| || ||||||| |||||| |||||| ||| |||||||   |||||| |||| ||||||| ||||||||||  |||| ||||||||| ||||||    
T  22844787 aatggattggataaaaccccgctttcatgggtttggacacgggtccaggtaat-acccataaatttaaatggatatgagcacgcgtaagggtattatact 22844885  T
Q  130 acctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttg 192  Q
      | | ||||||||||| |||| || ||||||||||||| | ||||||| ||||||||||||||    
T  22844886 gtccaaccccgcaaccccgcatatacatatttatataatatcataaataatttatttatttttg 22844949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 26787259 - 26787338
Alignment:
Q  123 ctatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||| ||||||||||||||| | |  ||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  26787259 ctatactacccagccccgcaacccgcctatgcatatttatataatataataaatattttatttatttttgatgtacaatt 26787338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 25467958 - 25467786
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||| | |||| | |||||| |||| ||||||  ||||||| | ||   ||||| ||||| ||||| |||| |||||    
T  25467958 aaaatacccacaatgggtagggtaaaatcccgctatcatgggtctggggacgggtccgggtaat-atccacgaatttaaatgggtatgggcacgagtaag 25467860  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||| || |||||||||| |||||||  | |||||||| |||| | |||| || |||||||||||||    
T  25467859 ggtactatactgcccagccccgcaaccccgcataaacatatttatttaatatcataagtaatttatttattttt 25467786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 33119430 - 33119258
Alignment:
Q  31 aatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatact 129  Q
    ||||| |||||||||||| |||||||||||||||| ||  ||||  |||||||||||  |||||||  |||  ||||    |||||||||| |||||| |    
T  33119430 aatgggtagggtaaaaccccgcttttatgggtatgagcttgggttcgggtaattacctataaatttagatgagtatgagtgcgggtaagggcactatatt 33119331  T
Q  130 acctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||||||| |||||| |||| ||  |||||||| ||| ||| ||||| ||||| ||||| ||||||||||||    
T  33119330 atctagccctgcaacctgcatatacgtatttataaaatataaaaaatattttatctatttatggtgtacaatt 33119258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 202
Target Start/End: Complemental strand, 48584475 - 48584348
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatattt-atataatgtaataa 174  Q
    ||||||||| ||| |||||| || |||||||| |||||||| | | ||| ||||||  || || ||||||||||| ||| ||||| ||||||| | ||||    
T  48584475 gggtaattatccgcaaatttgaaaggatatgggcacgggtatgagcactgtactactcagtcctgcaacccgcatatatgtattttatataatatgataa 48584376  T
Q  175 atactttatttatttttggtgtacaatt 202  Q
    ||| ||||||||||||| ||||||||||    
T  48584375 ataatttatttattttttgtgtacaatt 48584348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 35204719 - 35204604
Alignment:
Q  81 attacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactt 180  Q
    ||||||||||||||||||||||||      || ||||| ||| ||||||||| | || ||||| |||||| |||||||||||||||| | ||||||| ||    
T  35204719 attacccgtaaattttaatggata------cgagtaagagtaatatactacccaacctcgcaatccgcatatatatatttatataatatgataaataatt 35204626  T
Q  181 tatttatttttggtgtacaatt 202  Q
    |||||| |||| ||||| ||||    
T  35204625 tatttaatttttgtgtataatt 35204604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 8340482 - 8340352
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtag-ggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||| |||| ||| || |||||||||||| ||||||  ||||||| |||| ||||   |||||||||||||||| || || || || ||||||||||| |    
T  8340482 aaaaaacccgcaacgggtagggtaaaacc-cgctttcgtgggtataggcatgggtccaggtaattacccgtaaacttaaaagggtacggacacgggtatg 8340384  T
Q  119 ggtactatactacctagccccgcaacccgcat 150  Q
    || ||||||||||| |||||||||||| ||||    
T  8340383 ggcactatactacccagccccgcaacctgcat 8340352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 35732630 - 35732568
Alignment:
Q  140 gcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  35732630 gcaactcgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 35732568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 30964250 - 30964326
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||| | ||||||||||| ||| |||||||||||| | ||||||| |||||| |||||| ||||||||||    
T  30964250 tactacccagcactgcaacccgcatatatgtatttatataatattataaataatttattaattttttgtgtacaatt 30964326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 30980062 - 30980138
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||| | ||||||||||| ||| |||||||||||| | ||||||| |||||| |||||| ||||||||||    
T  30980062 tactacccagcactgcaacccgcatatatgtatttatataatattataaataatttattaattttttgtgtacaatt 30980138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 46584974 - 46584851
Alignment:
Q  78 gtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaata 177  Q
    ||||||||||| |||||| ||||| || || ||||| |||||||| |||| |  | | |||||||||||||||  | ||||||||||||  | |||||||    
T  46584974 gtaattacccgcaaatttaaatgggtaggg-cacggataagggtattatattgtccaaccccgcaacccgcatagacatatttatataaaattataaata 46584876  T
Q  178 ctttatttatttttggtgtacaatt 202  Q
     |||||||||||||| |||| ||||    
T  46584875 atttatttatttttgatgtataatt 46584851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 6083288 - 6083334
Alignment:
Q  155 atatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  6083288 atatttatataatataa-aaatactttatttatttttggtgtacaatt 6083334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 6409026 - 6408917
Alignment:
Q  37 tagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctag 135  Q
    |||||||||||  ||||||||||||| ||| ||| |||| | ||||| ||||  ||| || |||| |||||| ||||||||||||||||||||| || ||    
T  6409026 tagggtaaaactccgcttttatgggtctggacacaggtacgagtaat-acccacaaaattaaatgaatatgggcacgggtaagggtactatactgccgag 6408928  T
Q  136 ccccgcaaccc 146  Q
     ||||||||||    
T  6408927 acccgcaaccc 6408917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 28751883 - 28751948
Alignment:
Q  134 agccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||| ||| ||||||||||   | ||||||| ||||||||||||| ||||||||||    
T  28751883 agccccgcaacccgcatatatgtatttatata---tgataaataatttatttattttttgtgtacaatt 28751948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 39952908 - 39952854
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaacc 145  Q
    ||||| ||||||||||| |||| ||||||||||||||||  ||||||||||||||    
T  39952908 aatttaaatggatatgggcacgagtaagggtactatactgtctagccccgcaacc 39952854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 43657651 - 43657593
Alignment:
Q  144 cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  43657651 cccgcatatatgtatttatataatattataaataatttatttatttttagtgtacaatt 43657593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 49375192 - 49375134
Alignment:
Q  140 gcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtac 198  Q
    ||||||||||| ||| |||||||||||| | ||||||| ||| ||||||||||||||||    
T  49375192 gcaacccgcatatatgtatttatataatattataaataatttttttatttttggtgtac 49375134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 35732739 - 35732642
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgg 113  Q
    ||||||||||||   ||||||||||||||||| |||||| ||| ||  ||||  ||||| ||||||||||||||||||||  ||||  ||||||||||    
T  35732739 caaaaaatacccgttatggatagggtaaaaccccgctttcatgagtccgggcttgggtatgggtaattacccgtaaatttatatgggcatggacacgg 35732642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 26787164 - 26787215
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggc 68  Q
    |||||||||||| |||||| |||| ||||||  |||||||||||||||||||    
T  26787164 caaaaaatacccgcaatgggtaggataaaactccgcttttatgggtatgggc 26787215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 6083094 - 6083123
Alignment:
Q  173 aaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||||||||||||||||||||    
T  6083094 aaatactttatttatttttggtgtacaatt 6083123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 2e-72; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 20216695 - 20216510
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  20216695 caaaaaatacccacaatgggtagggtaaaaccccactttcatgggtatgggcatgggtagggtaattacccgcaaattttaatgggtatggacacgggta 20216596  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||  | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20216595 agggtactatactactcaaccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 20216510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 20236293 - 20236108
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  20236293 caaaaaatacccacaatgggtagggtaaaaccccactttcatgggtatgggcatgggtagggtaattacccgcaaattttaatgggtatggacacgggta 20236194  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||  | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20236193 agggtactatactactcaaccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 20236108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 3616502 - 3616677
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||||||||| |||||||    
T  3616502 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatggatatgggcacgggt 3616600  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| |||| || || ||||||||||||| | ||||||  |||||||||||||    
T  3616601 aagggtactatactgcccagacccgcaaccccgaatatacatatttatataatatcataaattatttatttattttt 3616677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 24789989 - 24789814
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||||||||| |||||||    
T  24789989 caaaaaatatccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatggatatgggcacgggt 24789891  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||| ||||||||| || || ||| || |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  24789890 aaggatactatactgcccagacccacagacccgcatatacatatttatataatatcataaattatttatttattttt 24789814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 15542692 - 15542507
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| |||| |||||| ||||||| ||||||||||||||||| |  ||||  ||||||||||||| ||||||  |||| |||||   |||||    
T  15542692 caaaaaatacccgcaatagatagg-taaaaccccgcttttatgggtatggccttgggtccgggtaattacccgcaaatttagatgggtatgggtgcgggt 15542594  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||||| ||||| || | | |||||||| | || ||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  15542593 aagggcactatgctacccaggctcacaacccgcttatacatatttatataatataataaatattttatttattattggtgtacaatt 15542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 30801723 - 30801548
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| || |||||||   |||||| |||||| |||||||||||  ||||||| |||| ||||||| ||||| ||||| |||||||    
T  30801723 caaaaaatatccacaatgggtacggtaaaattccgctttcatgggtttgggcacgggtctgggtaat-acccataaatttaaatgggtatgggcacgggt 30801625  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||||||  |||||||||| ||||||| || ||||||||||||| | ||| ||| ||||| |||||||    
T  30801624 aagggtactatactactcagccccgcaaccccgcatatacatatttatataatatcatagataatttatatattttt 30801548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 1376664 - 1376489
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||| ||  ||| |||||||||||| ||||||||||||| ||||||||| || |||||| |||||   || || ||||| ||||| |||||||    
T  1376664 caaaaaatacctacggtgggtagggtaaaaccccgcttttatgggtttgggcacggatatgggtaa-tacccaccaaattaaatgggtatgggcacgggt 1376566  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  1376565 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 1376489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 37226352 - 37226529
Alignment:
Q  25 acccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtac 123  Q
    |||| ||||||||||||||||||| |||||| ||||||||| |   ||||  ||||||||||| | ||||||  ||||||||     | ||||| || ||    
T  37226352 acccgcaatggatagggtaaaaccccgctttcatgggtatgagtttgggtctgggtaattacc-gcaaatttagatggatataagtgcaggtaaaggcac 37226450  T
Q  124 tatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||  ||||| ||||||||||| || ||||||||||||| || |||||| ||||||||||||||||||||||||    
T  37226451 tatactacacagccctgcaacccgcatatacatatttatataatatagtaaatattttatttatttttggtgtacaatt 37226529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 24891086 - 24891269
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||||| |||| | |||||| |||| | ||||  |||||| |||||  |||||| | || | |||| ||||||||||    
T  24891086 aaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggatgggtccgggtaa-tacccacaaatttaattgaagatgggcacgggtaag 24891184  T
Q  119 ggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| |||||| || |||||||||| ||||||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  24891185 ggtattatactgcccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 24891269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 2620598 - 2620774
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||| ||||||||| |||||||||||| |||| | |||||| |||| ||||||  |||||| |||||   |||||||||||  |||| ||||| ||||    
T  2620598 aaaatatccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgggtaa-tacccacgaattttaatgggcatgggcacggataag 2620696  T
Q  119 ggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    | ||||||||| || |||||||| |||||||| || |||||||| |||| | |||| || ||||||||||||| |||||    
T  2620697 gatactatactgcccagccccgc-acccgcatatacatatttatttaatatcataagtaatttatttatttttagtgta 2620774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 38552071 - 38551905
Alignment:
Q  37 tagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctag 135  Q
    |||||||||||| |||||| ||||||  ||||  ||||| ||||||||||||| ||||||  |||| ||||| ||||| ||  |  ||| ||||||| ||    
T  38552071 tagggtaaaaccccgctttcatgggtccgggcttgggtatgggtaattacccgcaaatttatatgggtatgggcacggatatagacactgtactacccag 38551972  T
Q  136 ccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||| | || ||| ||| |||||||||||| | |||||||  |||||||||||||||||||||||    
T  38551971 ccccgccatccacatatatgtatttatataatattataaataaattatttatttttggtgtacaatt 38551905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 1667568 - 1667456
Alignment:
Q  91 aattttaatggatatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||||| ||||||| || |||||||| |||| | |||| || |||||||||||    
T  1667568 aatttaaatggctatggacacgggtaaaggtactatactgcctaggcccgcaaccccgcatatacatatttatttaatatcataagtaatttatttattt 1667469  T
Q  190 ttggtgtacaatt 202  Q
    || ||||| ||||    
T  1667468 ttagtgtataatt 1667456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 26560869 - 26561054
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||| ||||| | |||||||||||| | |||| |||| | |||| ||||||  ||||||| ||||  |||||| ||||| ||||||| | |||    
T  26560869 caaaaaatacctacaataggtagggtaaaacccccctttcatggatctggggacgggtccgggtaat-acccacaaatttaaatgggtatggacgcaggt 26560967  T
Q  116 aagggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    || ||||||||| |||| ||||| ||||||| |||| || |||||| |||||| | ||||||| ||||||||||||| ||||| ||||    
T  26560968 aaaggtactatattacccagccc-gcaaccccgcatatacatatttgtataatatcataaataatttatttattttttgtgtataatt 26561054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 7057994 - 7057898
Alignment:
Q  109 cacgggtaagggtactatactacctagccccgcaac-ccgcatgtatatatt--tatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||||||  || ||||| | ||| ||| ||||||||||||||||||| ||||    
T  7057994 cacgggtaagggtactatactacccagccccgcaacaccgcatatatatatttctacataatatcatagataatttatttatttttggtgtataatt 7057898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 29527924 - 29528012
Alignment:
Q  114 gtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| |||| |||||| ||||| |||| ||||||||| || ||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  29527924 gtaacggtattatactgcctagtcccgtaacccgcatatacatatttatataatatgataaataatttatttatttttggtgtataatt 29528012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 38020633 - 38020526
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaa 175  Q
    ||||||||||||| ||| || || || || || |||||||| ||| ||||||||||| |||||||||| |||||| ||| | |||||||||| |||||||    
T  38020633 gggtaattacccgcaaacttaaaagggtacgggcacgggtatgggcactatactacccagccccgcaatccgcatatatgtttttatataatataataaa 38020534  T
Q  176 tactttat 183  Q
    || |||||    
T  38020533 taatttat 38020526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 7583764 - 7583675
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatata 165  Q
    ||||||||||||| ||| || || || || || |||||||| ||| ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  7583764 gggtaattacccgcaaacttaaaagggtacgggcacgggtatgggcactatactacccagccccgcaacccgcatatatgtatttatata 7583675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 6110095 - 6109912
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||| | | || | |||||| |||| ||||||  ||||||| ||||   ||||| ||| | ||||| |||||||||     
T  6110095 aaaatacccacaatgggtagggtaaaatcccactatcatgggtctggggacgggtctgggtaat-acccacgaatttaaatagttatgggcacgggtaaa 6109997  T
Q  119 ggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||| | || || |||||||||| |||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  6109996 ggtactatagtgcccaggcccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 6109912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 7058045 - 7057987
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta 75  Q
    ||||||||||||||||| | |||||||||| |||||||| |||||| ||||||||||||    
T  7058045 caaaaaatacccacaataggtagggtaaaatctcgctttcatgggtttgggcacgggta 7057987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 25178662 - 25178783
Alignment:
Q  81 attacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactt 180  Q
    |||||||| || ||| ||||  |||||  ||| ||||||||||||||||  | | |||||| |||| | | || ||||||||||||| | ||||||| ||    
T  25178662 attacccgcaattttaaatgagtatgggtacgcgtaagggtactatactgtccaaccccgctacccacttatacatatttatataatatgataaataatt 25178761  T
Q  181 tatttatttttggtgtacaatt 202  Q
    ||||||||||||||||| ||||    
T  25178762 tatttatttttggtgtataatt 25178783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 25419731 - 25419546
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||||||||||||||| |||||||||||  |||| | |||||| |||| ||||||  ||  | ||| |   ||||| | || | |||| ||| |||||    
T  25419731 aaaaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccggataatacacacgaatttaattgaagatgggcacaggtaa 25419632  T
Q  118 gggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||||||  | ||||||||||||| |||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  25419631 gggtattatactgtccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 25419546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 25428071 - 25427886
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||||||||||||||| |||||||||||  |||| | |||||| |||| ||||||  ||  | ||| |   ||||| | || | |||| ||| |||||    
T  25428071 aaaaaatacccacaatgggtagggtaaaactccgctatcatgggtctggggacgggtccggataatacacacgaatttaattgaagatgggcacaggtaa 25427972  T
Q  118 gggtactatactacctagccccgcaaccc-gcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||||||  | ||||||||||||| |||| || |||||||| |||| | |||| || ||||||||||||| ||||| ||||    
T  25427971 gggtattatactgtccagccccgcaaccccgcatatacatatttatttaatatcataagtaatttatttatttttagtgtataatt 25427886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 43511564 - 43511474
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| |||||||| |  | |||||||||||||||||  | ||||||||  ||| | ||||||| ||||||||||||||||||| ||||    
T  43511564 gggtaagagtactatattgtccagccccgcaacccgcataaacatatttatccaatatgataaataatttatttatttttggtgtataatt 43511474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 19643152 - 19643301
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctc-gcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaa 117  Q
    |||||| ||||||||| |||||||||||| | ||| | |||||| |||| ||| ||  ||||||| ||||  |||||| ||||| ||||| ||  |||||    
T  19643152 aaaatatccacaatgggtagggtaaaacccccgctatcatgggtctggggacgtgtccgggtaat-acccacaaatttaaatgggtatgggcaatggtaa 19643250  T
Q  118 gggtactatactacctagccccgcaa-cccgcatgtatatatttatataat 167  Q
    |||||||||||| ||  ||||||||| ||||||| || |||||||| ||||    
T  19643251 gggtactatactgccctgccccgcaaccccgcatatacatatttatttaat 19643301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 7583824 - 7583767
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggt 62  Q
    |||||| | |||||||||| |||| |||||| |||||||||||| |||||| ||||||    
T  7583824 gatggatacccacaaaaaaaacccgcaatgggtagggtaaaaccccgctttcatgggt 7583767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 6e-70; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 4290122 - 4289939
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  4290122 caaaaaatacccacaatgggtagggtaaaaccccgctttcatggatatgggcacgggtagg-taattacccgcaaattttaatgggtatggacacgggta 4290024  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||| |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4290023 agg-tactatactacccagccccgcaacccgcatgtacatatttatataatataataaatactttatttatttttggtgtacaatt 4289939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 10391266 - 10391450
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||||||||||| | ||  |||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||| ||    
T  10391266 caaaaaatacccacaataggtaacgtaaaactccgctttcatgggtatgggcacgggtagggtaattacccgcaaattttaattggtatagacacgg-ta 10391364  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||| ||||||||||   || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10391365 aggttactatactagacagtcccgcaacccgcatgtacatatttatataatataataaatactttatttattttttgtgtacaatt 10391450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 33867177 - 33867352
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  33867177 caaaaaatacccacaatgggtagggtaaaaccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 33867275  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  33867276 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 33867352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 40474822 - 40475020
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggat 103  Q
    |||||||| || ||||||||||||  ||||||||||||||| || ||| ||||||| ||||| |  ||||  | ||||||||||| ||||||  |||| |    
T  40474822 gatggacacccgcaaaaaatacccgtaatggatagggtaaatccacgcatttatggatatggacttgggtccgagtaattacccgcaaatttagatgggt 40474921  T
Q  104 atggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||    ||||||||| || ||||||||| ||||||||||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||||    
T  40474922 atgagtgcgggtaaggatattatactacccagccccgcaacccgcatatacatgtttatataatgtaataaatattttatttatttttggtgtacaatt 40475020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 25425229 - 25425054
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  25425229 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 25425131  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || |||||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  25425130 aagggtactatactgcccagacccgcatacccgcatatacatatttatataatatcataaattatttatttattttt 25425054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 29155793 - 29155607
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||||  || | |||||||||||| |||||| |||||| |||||||||||  ||||||| ||||  |||||| ||||| ||||| |||||||    
T  29155793 caaaaaatacccatgataggtagggtaaaaccccgctttcatgggtttgggcacgggtccgggtaat-acccacaaatttaaatgggtatgggcacgggt 29155695  T
Q  116 aagggtactatactacctagccccgcaacc-cgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||||||| |  |||||||||||| ||||| || ||||||||||||| |  |||||| ||||||||||||||||||| ||||    
T  29155694 aagggtactatactgctcagccccgcaaccacgcatatacatatttatataatatcgtaaataatttatttatttttggtgtataatt 29155607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 11789135 - 11788949
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| || | |||| ||||||||||||||||||| |||| |  ||||  ||||| || |||||||||| ||||||  |||| ||||| |||||||    
T  11789135 caaaaaatatccgctatgggtagggtaaaacctcgctttcatggatccgggcttgggtatggataattacccgcaaatttatatgggtatgggcacgggt 11789036  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| | | ||||||| ||||||||||||||||| ||| || ||||||||| | ||||||| ||||||||||||||||||||||||    
T  11789035 atgggcaatgtactacccagccccgcaacccgcatatatgtaattatataatattataaataatttatttatttttggtgtacaatt 11788949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 4481529 - 4481369
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| ||||||| ||||  ||| || ||||||||||| |||||||    
T  4481529 caaaaaatacccacaatgggtagggtaaaaccccgcttttatggatctgggcacgggtacgggtaat-acccacaaaattaaatggatatgggcacgggt 4481431  T
Q  116 aagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaat 176  Q
    |||||||||||||| || || ||| || |||||||| || ||||||||||||| | ||||||    
T  4481430 aagggtactatactgcccagacccacagacccgcatatacatatttatataatatcataaat 4481369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 8754342 - 8754219
Alignment:
Q  79 taattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatac 178  Q
    ||||||||||||||||| ||||| ||||| || ||||| ||| ||| ||||||||||||| ||||||||||| ||| |||||||||||| | |||||||     
T  8754342 taattacccgtaaatttgaatgggtatgggcatgggtatgggcactgtactacctagccctgcaacccgcatatatgtatttatataatatgataaataa 8754243  T
Q  179 tttatttatttttggtgtacaatt 202  Q
    ||||||||||||| ||||||||||    
T  8754242 tttatttattttttgtgtacaatt 8754219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 35049123 - 35048959
Alignment:
Q  39 gggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagcc 137  Q
    |||||||||| |||||| ||||||  ||||  ||||| ||||||||||||| ||||||  |||| ||||| ||||| || ||| ||| ||||||| ||||    
T  35049123 gggtaaaaccccgctttcatgggtccgggcttgggtatgggtaattacccgcaaatttatatgggtatgggcacggatatgggcactgtactacccagcc 35049024  T
Q  138 ccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||| |||||||| ||| ||||||| |||| | ||||||| ||||||||||||||||||||||||    
T  35049023 ccgccacccgcatatatgtatttatgtaatattataaataatttatttatttttggtgtacaatt 35048959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 39766743 - 39766866
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaa 175  Q
    ||||||||||||||||||||   ||| |||||   |||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||| || ||||    
T  39766743 gggtaattacccgtaaatttatttgggtatgggtgcgggtaagggcactatactacccagccccgcaacccgcatatacatatttatataatatagtaaa 39766842  T
Q  176 tactttatttatttttggtgtaca 199  Q
    || || ||||||||||||||||||    
T  39766843 tatttaatttatttttggtgtaca 39766866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 40507276 - 40507367
Alignment:
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||| |||||||||||| |||||||||| |||||| || || |||||||||||||||||||| ||||||||||||||||||||||||    
T  40507276 cgggtaaggatactatactacccagccccgcaatccgcatatacatgtttatataatgtaataaatattttatttatttttggtgtacaatt 40507367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 38620875 - 38620689
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatat 105  Q
    ||||| |||| ||||||||| ||| ||||| |||||||||||  ||||||||||||| ||| |||||||| ||  | |||||  ||| || |||||||||    
T  38620875 atggatatccgcaaaaaatatccataatgggtagggtaaaacaccgcttttatgggtctggacacgggtacggataatacccacaaaattaaatggatat 38620776  T
Q  106 ggacacgggtaagggtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    || ||||||||||||||||||||| || || | || | ||||||||||| ||||||||||||| | |||| |  |||||||||||||    
T  38620775 gggcacgggtaagggtactatactgcccaggctcgtagacccgcatgtacatatttatataatatcataatttatttatttattttt 38620689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 8027078 - 8027275
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggata 104  Q
    ||||||| ||||||||||||||| | |||| |||||||||||  |||||| ||||||  |     ||||| || |||||||||  ||||||  |||| ||    
T  8027078 atggacacccacaaaaaatacccgctatgggtagggtaaaactccgctttcatgggtccgaatttgggtatggataattacccacaaatttgtatgggta 8027177  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||  |||||||| ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| |||||||||||||| |||||||||    
T  8027178 tgagcacgggtatgggcactgtactacccagccccgcaacccgcatatatgtatttatataatattataaataatttatttatttttgatgtacaatt 8027275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 3329636 - 3329461
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||| | || |||||||||| |||||||||||| ||||||| ||||  ||| || ||||| ||||| |||||||    
T  3329636 caaaaaatatccacaatgggtagggtaaaatcccgtttttatgggtctgggcacgggtacgggtaat-acccacaaaattaaatgggtatgggcacgggt 3329538  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||| |||||| |  || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  3329537 aagggtattatactgctcagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 3329461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 12345133 - 12345311
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| |||||| ||||||  ||||  ||||| ||||||||||||||||||||  ||  ||||||      ||    
T  12345133 caaaaaatacccgctatgggtagggtaaaaccccgctttcatgggtccgggcttgggtatgggtaattacccgtaaatttatat--atatgg------gt 12345224  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||| ||| ||||||| |||||||| |||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  12345225 atgggcactgtactaccgagccccgccacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 12345311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 30241895 - 30241726
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||      |||||  ||| || ||||| ||||  ||||||||    
T  30241895 caaaaaatagccacaatggatagggtaaaaccccgcttttatgggtttgggtacgggtag------tacccacaaaattaaatgggtatgagcacgggta 30241802  T
Q  117 agggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||| | || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  30241801 agggtactatattgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 30241726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 18975301 - 18975118
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggata 104  Q
    ||||| |||| |||||| ||||| |||||| ||||||||| || |||||| |||||||||| || ||||  || |||||||||| ||| || || || ||    
T  18975301 atggatatccgcaaaaattacccgcaatgggtagggtaaatccccgctttcatgggtatggacatgggtccggataattacccgcaaacttaaaagggta 18975202  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
     ||||||||||| ||| ||||||||||| | |||| |||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  18975201 cggacacgggtatgggcactatactacccatccccacaacccgcacatatgtatttatataatataataaataatttatatatt 18975118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 4260923 - 4260723
Alignment:
Q  5 gatggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggat 103  Q
    |||||||| ||  |||||||| ||  |||||||||||||||||| | | ||||||| |||| ||  ||||  ||||||||||| | ||||||  |||| |    
T  4260923 gatggacacccgtaaaaaatatccgtaatggatagggtaaaacccctcatttatggatatgagcttgggtccgggtaattacctgcaaatttagatgggt 4260824  T
Q  104 atggacacgggtaagggtactatactacctagccccgc--aacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaat 201  Q
    ||||   ||| |||||| ||||||||||| ||||||||  ||||| ||| || ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  4260823 atgggtccggataagggcactatactacccagccccgcgcaacccacatatacatatttatataatataataaatattttaattatttttggtgtacaat 4260724  T
Q  202 t 202  Q
    |    
T  4260723 t 4260723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 29545608 - 29545785
Alignment:
Q  12 atccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggaca 110  Q
    |||| |||||| ||||| |||||| ||||||||| || | |||| ||||||||||| | | ||  ||||||||||||| ||| || || || || |||||    
T  29545608 atccgcaaaaattacccgcaatgggtagggtaaatccccactttcatgggtatgggtatgagtctgggtaattacccgcaaacttaaaagggtacggaca 29545707  T
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    |||||| ||| ||||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||| ||||| ||||    
T  29545708 cgggtatgggcactatactacccatccccgcaacccgcacatatgtatttatataatataataaataatttatatatt 29545785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 23232204 - 23232033
Alignment:
Q  21 aaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagg 119  Q
    ||||| ||||||||| |||||||||||| ||||||||||| | ||| || ||||| |||||| |||||  ||| || ||||||||||  |||||||||||    
T  23232204 aaatatccacaatgggtagggtaaaaccccgcttttatggttttggacatgggtacgggtaa-tacccacaaaattaaatggatatgagcacgggtaagg 23232106  T
Q  120 gtactatactacctagccccgca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||| || || |||||| | |||||| || ||||||||||||| | ||||||  |||||||||||||    
T  23232105 gtactatactgcccagacccgcagatccgcatatacatatttatataatatcataaattatttatttattttt 23232033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 32422398 - 32422549
Alignment:
Q  41 gtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatactacctagcccc 139  Q
    |||| ||| ||||||||||||| |||||||||||| |||||| |||||  ||| || ||||| ||||| ||||||||||||||||||||| || || |||    
T  32422398 gtaataccccgcttttatgggtctgggcacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggtaagggtactatactgcccagaccc 32422496  T
Q  140 gca-acccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||| |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  32422497 gcatacccgcatatacatatttatataatatcataaattatttatttattttt 32422549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 31440276 - 31440443
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||| ||| || ||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  31440276 caaaaaatacccacaatgggtagggtaaaactccgcttttatgggtctggacatgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 31440374  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  31440375 aagggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 31440443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 13142208 - 13142378
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||  ||||| |||||  ||| || |||||  | || ||||    
T  13142208 ccacaaaaaatacccacaatgggtaggataaaaccccgcttttatgggtctgggcacgggtacaggtaa-tacccacaaaattaaatgggcaagggcacg 13142306  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  13142307 ggtaagggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 13142378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 15162381 - 15162291
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||| ||| |||||||| | ||||||| ||||||||||||||||||||||||    
T  15162381 gggtatgggcactgtactacccagccccgcaacccgcatatatgtatctatataatattataaataatttatttatttttggtgtacaatt 15162291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 17961083 - 17961261
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggata 104  Q
    ||||| |||| ||||||||||||| ||| | |||||||||||| ||||||||||||| || |||||| || | |||| ||||| |||| || ||||| ||    
T  17961083 atggatatccgcaaaaaatacccataataggtagggtaaaaccccgcttttatgggtctgagcacggatacgcgtaa-tacccataaaattaaatgggta 17961181  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
     || ||||||||||||||||||||| || ||       |||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  17961182 cgggcacgggtaagggtactatactgcccag-------acccgcatatacatatttatataatatcataaattatttatttattttt 17961261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 42969438 - 42969362
Alignment:
Q  126 tactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||| ||||||||    
T  42969438 tactacccagccccgcaacccgcatatatgtatttatataatattataaataatttatttatttttggcgtacaatt 42969362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 2657322 - 2657147
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| |||| ||||||||||||||||| | |||| ||||||  || |  ||| | || |||||||| | ||| || ||||| |||||||||||||    
T  2657322 caaaaaatatccactatggatagggtaaaaccccactttcatgggtccggacttgggcatggataattacctgcaaaattgaatgggtatggacacgggt 2657223  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    | ||  | | ||||||  || |||||||||||||| | | |||||||||||| | ||||||| |||||||||||||    
T  2657222 atggacattgtactactcagtcccgcaacccgcatatttgtatttatataatatgataaataatttatttattttt 2657147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 16711058 - 16711164
Alignment:
Q  90 aaattttaatggatatggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttattt 189  Q
    |||||| ||||| ||||||||| |||||||||||||||||  | |||||| |||||||||| || |||||||||||||   ||||||  |||||||| ||    
T  16711058 aaatttaaatgggtatggacacaggtaagggtactatactgtcgagccccacaacccgcatatacatatttatataatacgataaatcatttatttaatt 16711157  T
Q  190 ttggtgt 196  Q
    || ||||    
T  16711158 tttgtgt 16711164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 202
Target Start/End: Complemental strand, 20937536 - 20937361
Alignment:
Q  12 atccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtagg-gtaattacccgtaaattttaatggatatggaca 110  Q
    |||| ||||||||| ||||||||| || ||||||||| |||||| |||||| ||| |||||||  | ||||| ||||  |||||||||||| |||| |||    
T  20937536 atccgcaaaaaatatccacaatgggtaaggtaaaaccccgctttcatgggtctggacacgggtccgagtaat-acccacaaattttaatgggtatgaaca 20937438  T
Q  111 cgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    | ||||||||||||||||               || |||| |||||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  20937437 caggtaagggtactatac---------------cctgcatatatatatttatataatatcataaataatttatttatttttggtgtataatt 20937361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 44070130 - 44070219
Alignment:
Q  103 tatggacacgggtaagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    ||||| ||||||||||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  44070130 tatgggcacgggtaagggtactatactgcccagacccgcaaccccgcatatacatatttatataatattataaattatttatttattttt 44070219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 667617 - 667739
Alignment:
Q  20 aaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggatatggacacgggtaag 118  Q
    |||||||||||||||| |||||||||||| |||| | |||||| |||| ||||||  |||||| || ||   ||||| ||||| ||||| ||||||||||    
T  667617 aaaatacccacaatgggtagggtaaaaccccgctatcatgggtctggggacgggtccgggtaa-tatccacgaatttaaatgggtatgggcacgggtaag 667715  T
Q  119 ggtactatactacctagccccgca 142  Q
    ||||||||||| || | |||||||    
T  667716 ggtactatactgcccaaccccgca 667739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 35005120 - 35005179
Alignment:
Q  143 acccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||| || ||||||||||||| | ||||||| ||||||||| ||||||||||||||    
T  35005120 acccgcatatacatatttatataatatgataaataatttatttatctttggtgtacaatt 35005179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 9205606 - 9205552
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacg 71  Q
    ||||||||||||||||| | |||||||||||| ||||||||| ||| ||||||||    
T  9205606 caaaaaatacccacaataggtagggtaaaaccccgcttttataggtttgggcacg 9205552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 12758129 - 12758045
Alignment:
Q  118 gggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||||||||| | |||||  ||||||||| ||| || ||||||||||||| | ||||||| |||||||||  |||||||| ||||    
T  12758129 gggtactatattgcctagttccgcaacccacatatacatatttatataatatgataaataatttatttataattggtgtataatt 12758045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 4591953 - 4592011
Alignment:
Q  144 cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||| || ||||||||||||| | ||||||| ||||||||||||| ||||| ||||    
T  4591953 cccgcatatacatatttatataatatcataaataatttatttattttttgtgtataatt 4592011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 41935144 - 41935210
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatt 188  Q
    ||||||||||| ||||| ||||||| ||| ||| | |||||||||| ||||||||| ||||| ||||    
T  41935144 actatactacccagccctgcaacccacatatatgtttttatataatataataaataatttatatatt 41935210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 44070085 - 44070143
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta 75  Q
    |||||||||  || ||||| |||||||||| | |||||||||| |||||||||||||||    
T  44070085 caaaaaatattcataatgggtagggtaaaatcccgcttttatgagtatgggcacgggta 44070143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 6 - 195
Target Start/End: Complemental strand, 250704 - 250514
Alignment:
Q  6 atggacatccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggt-agggtaattacccgtaaattttaatggata 104  Q
    ||||||| || |||||||||||| |||| | || ||||||||| |||||| ||||||||||||  |||| | |||||||||||| |||||| | ||| ||    
T  250704 atggacacccgcaaaaaatacccgcaattggtatggtaaaaccccgctttcatgggtatgggcttgggtcaaggtaattacccgcaaatttaagtgggta 250605  T
Q  105 tggacacgggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtg 195  Q
    | |   |||||||||| ||||||||||  ||||||||||||| ||| || ||||||| ||||| |||||||||||||||||||||||||||    
T  250604 taggtgcgggtaagggcactatactactcagccccgcaacccacatatacatatttacataatataataaatactttatttatttttggtg 250514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 9e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 240099 - 240278
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacg 112  Q
    |||||||||||| |||||||||||||||||||| | ||||||| ||| | ||| |||||||| |||||| |||||  ||| || ||||| || || ||||    
T  240099 ccacaaaaaatatccacaatggatagggtaaaatcccgcttttgtggatctggacacgggtacgggtaa-tacccacaaaattaaatgggtacgggcacg 240197  T
Q  113 ggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgta--ataaatactttatttattttt 191  Q
    |||||||||||||||||||| || |||||||||||||| || ||||||||||||| ||  ||||||  |||||||||||||    
T  240198 ggtaagggtactatactacccagacccgcaacccgcatatacatatttatataatatatcataaattatttatttattttt 240278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 221670 - 221750
Alignment:
Q  122 actatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| || ||||||||| |||| || ||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  221670 actatactacccagtcccgcaacctgcatatacatatttatataatataataaatattttatttatttttgatgtacaatt 221750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 6744 - 6919
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||  || |||||||||| ||| |||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  6744 caaaaaatatccacaatgggtagggtaaaactccgtttttatgggtctggacacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 6842  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  6843 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 6919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 14625 - 14800
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggt 115  Q
    ||||||||| ||||||||| |||||||||||  || |||||||||| ||| |||||||| |||||| |||||  ||| || ||||| ||||| |||||||    
T  14625 caaaaaatatccacaatgggtagggtaaaactccgtttttatgggtctggacacgggtacgggtaa-tacccacaaaattaaatgggtatgggcacgggt 14723  T
Q  116 aagggtactatactacctagccccgcaa-cccgcatgtatatatttatataatgtaataaatactttatttattttt 191  Q
    |||||||||||||| || || ||||||| ||||||| || ||||||||||||| | ||||||  |||||||||||||    
T  14724 aagggtactatactgcccagacccgcaaccccgcatatacatatttatataatatcataaattatttatttattttt 14800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 8245 - 8122
Alignment:
Q  76 gggtaattacccgtaaattttaatggatatggacacgggtaagggtactatacta-cctagccccgcaacccgcatgta--tatatttatataatgtaat 172  Q
    ||||||||||| |||||||| ||||| ||||||| |||||||| |||||||| |  |||| ||||||||||||||| ||  |||||||||||||||| ||    
T  8245 gggtaattacctgtaaatttaaatgggtatggacgcgggtaagagtactataatgtccta-ccccgcaacccgcatatacatatatttatataatgtcat 8147  T
Q  173 aaatactttatttatttttggtgta 197  Q
    ||||| |||||||||||||||||||    
T  8146 aaataatttatttatttttggtgta 8122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 2511 - 2327
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||||  ||||||| |||||||||||| | |||||||||||||||||  | ||  ||||||||||| | ||||||  |||| |||||   ||||||    
T  2511 aaaaaatacttacaatgggtagggtaaaaccccacttttatgggtatgggcttgagtccgggtaattacc-gcaaatttagatgggtatgggtgcgggta 2413  T
Q  117 agggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |||  ||||||||| | ||||| |||| |||||| || ||||||||||||| || |||||| ||||||||||||||||||| ||||    
T  2412 aggccactatactatccagccctgcaatccgcatatacatatttatataatatagtaaatattttatttatttttggtgtagaatt 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 109681 - 109771
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  109681 gggtatgggcactgtactacccagccccgcaacccgcatatatgtatttatataatattataaataatttatttatttttggtgtacaatt 109771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 1005 - 819
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| ||||||  |||||  ||    ||||| || |||||||||| |||||| ||||||||||| |||||||    
T  1005 caaaaaatacccgctatgggtagggtaaaaccccgctttcctgggtcaggaattgggtatggataattacccgcaaatttaaatggatatgggcacgggt 906  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |  ||   | |  |||| |||||| ||||| |||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  905 atcggccttgttttacccagccccacaacctgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 819  T

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Target: scaffold0062 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 23447 - 23633
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| ||||||  |||||  ||    ||||| || |||||||||| |||||| ||||||||||| |||||||    
T  23447 caaaaaatacccgctatgggtagggtaaaaccccgctttcctgggtcaggaattgggtatggataattacccgcaaatttaaatggatatgggcacgggt 23546  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |  ||   | |  |||| |||||| ||||| |||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  23547 atcggccttgttttacccagccccacaacctgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 23633  T

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Target: scaffold0062; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 33615 - 33801
Alignment:
Q  17 caaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggtaggg-taattacccgtaaattttaatggatatggacacgggt 115  Q
    |||||||||||| | |||| |||||||||||| ||||||  |||||  ||    ||||| || |||||||||| |||||| ||||||||||| |||||||    
T  33615 caaaaaatacccgctatgggtagggtaaaaccccgctttcctgggtcaggaattgggtatggataattacccgcaaatttaaatggatatgggcacgggt 33714  T
Q  116 aagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    |  ||   | |  |||| |||||| ||||| |||| ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  33715 atcggccttgttttacccagccccacaacctgcatatatgtatttatataatatgataaataatttatttattttttgtgtacaatt 33801  T

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Target: scaffold0242 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 12754 - 12844
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||| ||| ||||||| || |||||||||||||| ||| |||||||||||| | ||||||| ||||||||| ||| ||||||||||    
T  12754 gggtatgggcactgtactacccagtcccgcaacccgcatatatgtatttatataatatgataaataatttatttatattttgtgtacaatt 12844  T

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Target: scaffold0242; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 21589 - 21679
Alignment:
Q  112 gggtaagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||| ||| ||| ||||||| || |||||||||||||| ||| |||||||||||| | ||||||| ||||||||| ||| ||||||||||    
T  21589 gggtatgggcactgtactacccagtcccgcaacccgcatatatgtatttatataatatgataaataatttatttatattttgtgtacaatt 21679  T

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Target: scaffold0242; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 12667 - 12715
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggt 62  Q
    ||||||||||||||| | |||| |||||||||||| |||||| ||||||    
T  12667 ccacaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggt 12715  T

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Target: scaffold0242; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 21502 - 21550
Alignment:
Q  14 ccacaaaaaatacccacaatggatagggtaaaacctcgcttttatgggt 62  Q
    ||||||||||||||| | |||| |||||||||||| |||||| ||||||    
T  21502 ccacaaaaaatacccgctatgggtagggtaaaaccccgctttcatgggt 21550  T

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Target: scaffold0312 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 5508 - 5619
Alignment:
Q  18 aaaaaatacccacaatggatagggtaaaacctcgcttttatgggtatgggcacgggta-gggtaattacccgtaaattttaatggatatggacacgggta 116  Q
    |||||||| ||||||||  |||||||||| | | ||||||||||| |||| ||||||  ||||||| ||||  ||| || ||||||||||| ||||||||    
T  5508 aaaaaatatccacaatgagtagggtaaaatcccacttttatgggtctgggtacgggtccgggtaat-acccacaaaattaaatggatatgggcacgggta 5606  T
Q  117 agggtactatact 129  Q
    |||||||||||||    
T  5607 agggtactatact 5619  T

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Target: scaffold0056 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 72337 - 72416
Alignment:
Q  118 gggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgta 197  Q
    ||||||||||||||  ||||||||||||||||  |||||||||||| |||   |||| || |||||||||||||||||||    
T  72337 gggtactatactacacagccccgcaacccgcacatatatatttatacaataggataagtaatttatttatttttggtgta 72416  T

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Target: scaffold0249 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 20437 - 20379
Alignment:
Q  144 cccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  20437 cccgcatgtatgtatttatataatatgataaataatttatttattttttgtgtacaatt 20379  T

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Target: scaffold0602 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 5379 - 5292
Alignment:
Q  115 taagggtactatactacctagccccgcaacccgcatgtatatatttatataatgtaataaatactttatttatttttggtgtacaatt 202  Q
    ||||||||||||| | || |  ||| |||||||||| || ||||||||||||  | ||||||| |||||||||| |||||||| ||||    
T  5379 taagggtactatattgcccaatcccacaacccgcatatacatatttatataaaatgataaataatttatttattcttggtgtataatt 5292  T

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