View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8986_low_11 (Length: 733)

Name: NF8986_low_11
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8986_low_11
NF8986_low_11
[»] chr3 (80 HSPs)
chr3 (175-733)||(7037795-7038353)
chr3 (20-163)||(47810706-47810849)
chr3 (49-142)||(27093344-27093437)
chr3 (56-163)||(4844472-4844580)
chr3 (56-163)||(4870168-4870276)
chr3 (49-163)||(10499070-10499185)
chr3 (49-159)||(31520570-31520681)
chr3 (48-150)||(14186647-14186748)
chr3 (49-162)||(36720381-36720495)
chr3 (90-163)||(44069799-44069873)
chr3 (48-163)||(10445100-10445217)
chr3 (48-163)||(14339609-14339725)
chr3 (48-163)||(51903839-51903955)
chr3 (49-163)||(46518628-46518743)
chr3 (52-142)||(53412948-53413038)
chr3 (56-163)||(8075088-8075196)
chr3 (47-151)||(8170670-8170774)
chr3 (61-160)||(47236935-47237035)
chr3 (49-163)||(8051214-8051329)
chr3 (49-163)||(30311306-30311421)
chr3 (48-151)||(31510692-31510795)
chr3 (46-163)||(2667859-2667977)
chr3 (46-163)||(12761509-12761627)
chr3 (49-162)||(27923005-27923119)
chr3 (48-142)||(28703387-28703481)
chr3 (49-138)||(16354879-16354968)
chr3 (48-163)||(40777013-40777127)
chr3 (88-163)||(44743816-44743892)
chr3 (49-128)||(2597217-2597296)
chr3 (48-162)||(16991541-16991656)
chr3 (90-160)||(19716238-19716309)
chr3 (49-163)||(30232330-30232445)
chr3 (50-163)||(47454578-47454692)
chr3 (48-162)||(8796056-8796169)
chr3 (49-151)||(26871478-26871580)
chr3 (49-146)||(4222141-4222238)
chr3 (86-162)||(30715779-30715855)
chr3 (49-142)||(37788448-37788541)
chr3 (47-162)||(51766894-51767009)
chr3 (49-163)||(40268489-40268603)
chr3 (57-162)||(11612307-11612413)
chr3 (49-127)||(17108896-17108974)
chr3 (49-151)||(31788945-31789046)
chr3 (49-142)||(15048044-15048137)
chr3 (91-163)||(20501738-20501810)
chr3 (49-141)||(5499391-5499483)
chr3 (49-129)||(21960551-21960631)
chr3 (88-159)||(33899653-33899725)
chr3 (44-124)||(45308903-45308983)
chr3 (56-119)||(17554778-17554841)
chr3 (49-148)||(19154631-19154730)
chr3 (60-151)||(32651412-32651503)
chr3 (49-163)||(49397502-49397617)
chr3 (49-163)||(54990703-54990817)
chr3 (88-142)||(3427536-3427590)
chr3 (49-162)||(16212934-16213048)
chr3 (56-142)||(33270455-33270541)
chr3 (50-127)||(18316497-18316573)
chr3 (73-142)||(27259185-27259254)
chr3 (49-142)||(34062531-34062626)
chr3 (51-119)||(42799754-42799821)
chr3 (88-163)||(52769944-52770020)
chr3 (49-141)||(53863852-53863943)
chr3 (48-119)||(3054993-3055064)
chr3 (91-150)||(17554494-17554553)
chr3 (88-139)||(39253736-39253787)
chr3 (49-163)||(43303758-43303872)
chr3 (49-131)||(26481927-26482009)
chr3 (49-147)||(34844371-34844468)
chr3 (49-115)||(39976441-39976507)
chr3 (48-142)||(40063618-40063712)
chr3 (52-129)||(13808881-13808958)
chr3 (61-161)||(26411557-26411658)
chr3 (60-113)||(30194981-30195034)
chr3 (52-129)||(30510195-30510272)
chr3 (88-129)||(31608520-31608561)
chr3 (111-163)||(33278981-33279034)
chr3 (88-137)||(36010781-36010830)
chr3 (86-119)||(49452910-49452943)
chr3 (110-151)||(53234013-53234054)
[»] chr8 (58 HSPs)
chr8 (49-163)||(3058011-3058125)
chr8 (49-163)||(44780075-44780190)
chr8 (49-162)||(968362-968476)
chr8 (69-163)||(16843756-16843850)
chr8 (49-163)||(11793482-11793597)
chr8 (49-163)||(28783060-28783175)
chr8 (51-159)||(2203494-2203603)
chr8 (48-163)||(11819775-11819891)
chr8 (49-163)||(16852340-16852455)
chr8 (49-163)||(18540298-18540413)
chr8 (49-163)||(29431011-29431126)
chr8 (51-159)||(3624582-3624690)
chr8 (52-140)||(36042984-36043072)
chr8 (49-147)||(40591732-40591827)
chr8 (49-163)||(8484999-8485114)
chr8 (48-151)||(23361623-23361726)
chr8 (48-147)||(35287715-35287814)
chr8 (50-159)||(29858014-29858124)
chr8 (49-125)||(6436555-6436631)
chr8 (49-160)||(35641865-35641977)
chr8 (69-163)||(6536540-6536635)
chr8 (48-162)||(27750729-27750844)
chr8 (49-127)||(19703485-19703563)
chr8 (49-162)||(26688865-26688979)
chr8 (48-142)||(33017213-33017307)
chr8 (49-162)||(18897166-18897279)
chr8 (52-163)||(34966811-34966923)
chr8 (48-139)||(6530806-6530896)
chr8 (49-162)||(20994419-20994534)
chr8 (49-148)||(22268911-22269009)
chr8 (49-143)||(13129668-13129762)
chr8 (49-142)||(12988428-12988521)
chr8 (92-148)||(28787473-28787529)
chr8 (48-162)||(33727835-33727950)
chr8 (49-142)||(30483867-30483960)
chr8 (49-151)||(32992778-32992881)
chr8 (90-151)||(40136938-40136997)
chr8 (53-163)||(4435979-4436090)
chr8 (42-141)||(8794329-8794428)
chr8 (88-162)||(11492035-11492110)
chr8 (49-147)||(43968976-43969074)
chr8 (60-141)||(35690048-35690129)
chr8 (52-133)||(36205198-36205279)
chr8 (91-151)||(40872918-40872978)
chr8 (47-147)||(43533697-43533797)
chr8 (88-151)||(3305162-3305225)
chr8 (49-128)||(3826774-3826853)
chr8 (49-116)||(5264544-5264611)
chr8 (49-163)||(8059632-8059747)
chr8 (88-131)||(22193358-22193401)
chr8 (48-119)||(23874388-23874459)
chr8 (66-163)||(7140726-7140823)
chr8 (47-125)||(11518877-11518955)
chr8 (114-163)||(35672486-35672536)
chr8 (90-151)||(3734726-3734786)
chr8 (48-141)||(12281493-12281586)
chr8 (106-151)||(36034495-36034540)
chr8 (94-151)||(43594292-43594349)
[»] chr2 (61 HSPs)
chr2 (49-163)||(42602554-42602669)
chr2 (49-163)||(37480075-37480190)
chr2 (49-151)||(42327369-42327471)
chr2 (49-162)||(19016031-19016145)
chr2 (48-163)||(23052484-23052600)
chr2 (49-151)||(19244109-19244211)
chr2 (49-141)||(1729816-1729908)
chr2 (57-163)||(21213777-21213884)
chr2 (49-163)||(7798997-7799111)
chr2 (49-151)||(11251087-11251189)
chr2 (51-162)||(12086091-12086203)
chr2 (48-163)||(41908599-41908715)
chr2 (49-163)||(29503271-29503385)
chr2 (49-163)||(34041549-34041664)
chr2 (48-142)||(11062359-11062453)
chr2 (49-142)||(42922414-42922508)
chr2 (49-142)||(19322768-19322861)
chr2 (49-163)||(1435064-1435178)
chr2 (49-159)||(39714992-39715103)
chr2 (50-163)||(16918539-16918653)
chr2 (49-162)||(21195638-21195752)
chr2 (49-151)||(29197350-29197452)
chr2 (52-161)||(30359657-30359766)
chr2 (48-142)||(40416373-40416467)
chr2 (48-142)||(13803494-13803588)
chr2 (50-163)||(37755932-37756046)
chr2 (49-163)||(12517715-12517833)
chr2 (85-161)||(37971931-37972008)
chr2 (49-142)||(45026743-45026836)
chr2 (49-141)||(3697384-3697475)
chr2 (48-163)||(18825340-18825455)
chr2 (48-147)||(16525177-16525275)
chr2 (49-159)||(30808612-30808723)
chr2 (48-151)||(32106565-32106668)
chr2 (48-145)||(28846690-28846787)
chr2 (52-104)||(7667490-7667542)
chr2 (52-163)||(14780509-14780621)
chr2 (88-163)||(25637190-25637266)
chr2 (73-132)||(4262295-4262354)
chr2 (88-162)||(14500316-14500391)
chr2 (49-163)||(26482093-26482207)
chr2 (49-128)||(26545840-26545919)
chr2 (69-163)||(30410510-30410605)
chr2 (39-125)||(12994376-12994461)
chr2 (96-162)||(20217863-20217929)
chr2 (91-148)||(18372304-18372361)
chr2 (56-141)||(23140896-23140981)
chr2 (56-141)||(23552686-23552771)
chr2 (49-141)||(33569842-33569935)
chr2 (107-151)||(23787111-23787155)
chr2 (49-148)||(342395-342493)
chr2 (52-151)||(13747608-13747706)
chr2 (92-162)||(26276398-26276469)
chr2 (88-143)||(33839242-33839297)
chr2 (56-126)||(2144452-2144522)
chr2 (90-163)||(6099480-6099553)
chr2 (52-126)||(32687484-32687558)
chr2 (48-129)||(5147675-5147756)
chr2 (56-141)||(17737608-17737692)
chr2 (87-144)||(22363170-22363227)
chr2 (50-119)||(23465927-23465996)
[»] scaffold0258 (1 HSPs)
scaffold0258 (49-163)||(15284-15399)
[»] chr6 (46 HSPs)
chr6 (49-163)||(31622952-31623067)
chr6 (49-162)||(33549104-33549218)
chr6 (48-150)||(14278086-14278187)
chr6 (48-141)||(30127399-30127492)
chr6 (49-163)||(14557962-14558076)
chr6 (62-163)||(20863388-20863489)
chr6 (68-162)||(6385881-6385976)
chr6 (49-163)||(12188264-12188379)
chr6 (49-163)||(21418470-21418585)
chr6 (49-162)||(24333987-24334101)
chr6 (50-163)||(6758383-6758497)
chr6 (54-141)||(6691535-6691621)
chr6 (49-163)||(23241987-23242101)
chr6 (49-162)||(12234469-12234583)
chr6 (49-162)||(13330087-13330201)
chr6 (48-163)||(1056646-1056762)
chr6 (53-125)||(10338174-10338246)
chr6 (72-163)||(11306135-11306227)
chr6 (88-163)||(20213080-20213156)
chr6 (88-163)||(22107103-22107179)
chr6 (55-162)||(34444809-34444917)
chr6 (53-143)||(6776589-6776679)
chr6 (98-163)||(8597708-8597774)
chr6 (48-142)||(11423565-11423659)
chr6 (49-162)||(14199909-14200023)
chr6 (93-137)||(10650027-10650071)
chr6 (43-123)||(13661515-13661594)
chr6 (49-128)||(19638001-19638080)
chr6 (90-141)||(28841455-28841506)
chr6 (51-141)||(32613124-32613214)
chr6 (88-163)||(23910074-23910148)
chr6 (52-100)||(13441053-13441101)
chr6 (87-162)||(15951264-15951340)
chr6 (51-151)||(22995009-22995109)
chr6 (51-151)||(23793291-23793391)
chr6 (91-151)||(28363979-28364039)
chr6 (49-116)||(3779339-3779406)
chr6 (108-151)||(11448922-11448965)
chr6 (49-163)||(24641151-24641266)
chr6 (58-128)||(12216753-12216823)
chr6 (87-163)||(2484758-2484835)
chr6 (49-130)||(2616476-2616557)
chr6 (72-141)||(11103419-11103488)
chr6 (47-163)||(12633007-12633124)
chr6 (90-151)||(15360201-15360261)
chr6 (87-163)||(18562599-18562676)
[»] chr5 (48 HSPs)
chr5 (48-163)||(8278236-8278352)
chr5 (49-163)||(16773807-16773922)
chr5 (48-163)||(14495766-14495882)
chr5 (49-163)||(29692347-29692462)
chr5 (48-142)||(25627056-25627150)
chr5 (49-151)||(30883172-30883274)
chr5 (49-142)||(34984806-34984899)
chr5 (48-163)||(17028225-17028341)
chr5 (49-163)||(16457810-16457925)
chr5 (49-163)||(21589288-21589403)
chr5 (49-163)||(22737082-22737197)
chr5 (49-142)||(14285161-14285254)
chr5 (48-163)||(29075780-29075896)
chr5 (49-163)||(30109270-30109384)
chr5 (48-142)||(7918452-7918546)
chr5 (49-142)||(26078034-26078127)
chr5 (88-163)||(84863-84939)
chr5 (49-160)||(87388-87499)
chr5 (49-142)||(21549120-21549213)
chr5 (52-163)||(12877696-12877808)
chr5 (88-163)||(43442235-43442311)
chr5 (51-142)||(18595984-18596075)
chr5 (106-163)||(35705043-35705101)
chr5 (95-163)||(17155868-17155937)
chr5 (47-136)||(31669014-31669102)
chr5 (56-163)||(1410622-1410728)
chr5 (48-163)||(3252250-3252366)
chr5 (48-163)||(6844728-6844844)
chr5 (53-124)||(16436622-16436692)
chr5 (49-119)||(40461619-40461689)
chr5 (90-162)||(29173531-29173604)
chr5 (90-162)||(37258328-37258401)
chr5 (49-124)||(5390853-5390926)
chr5 (91-162)||(35360048-35360120)
chr5 (48-119)||(892480-892551)
chr5 (90-141)||(3315256-3315307)
chr5 (108-151)||(8484764-8484807)
chr5 (108-151)||(18207258-18207301)
chr5 (90-141)||(31074273-31074324)
chr5 (48-162)||(32670590-32670704)
chr5 (92-161)||(1279034-1279104)
chr5 (94-148)||(18974005-18974059)
chr5 (48-142)||(19043457-19043551)
chr5 (87-129)||(25979208-25979250)
chr5 (58-163)||(35796580-35796686)
chr5 (52-141)||(18437088-18437177)
chr5 (91-163)||(28285294-28285367)
chr5 (40-129)||(36958118-36958207)
[»] chr4 (77 HSPs)
chr4 (48-159)||(19238542-19238654)
chr4 (48-162)||(46295096-46295211)
chr4 (56-147)||(49576872-49576963)
chr4 (48-142)||(37109334-37109428)
chr4 (49-162)||(51250484-51250598)
chr4 (49-159)||(55427165-55427276)
chr4 (47-163)||(5795369-5795487)
chr4 (49-163)||(7949415-7949530)
chr4 (48-142)||(31759641-31759735)
chr4 (67-163)||(51954132-51954229)
chr4 (52-163)||(7292759-7292871)
chr4 (48-163)||(28635695-28635811)
chr4 (49-163)||(4249177-4249292)
chr4 (49-163)||(8030165-8030280)
chr4 (48-163)||(37274420-37274537)
chr4 (48-159)||(8325344-8325456)
chr4 (49-141)||(19680772-19680864)
chr4 (73-163)||(23377980-23378071)
chr4 (49-163)||(37720175-37720290)
chr4 (98-163)||(2732043-2732109)
chr4 (51-163)||(40283947-40284060)
chr4 (90-162)||(51622526-51622599)
chr4 (48-159)||(19229173-19229284)
chr4 (69-163)||(38869788-38869883)
chr4 (49-148)||(39509070-39509169)
chr4 (48-163)||(15180740-15180853)
chr4 (42-151)||(31826602-31826711)
chr4 (49-162)||(2184994-2185109)
chr4 (49-141)||(2622379-2622475)
chr4 (69-148)||(13015447-13015526)
chr4 (52-147)||(20281170-20281265)
chr4 (49-163)||(29195095-29195209)
chr4 (48-147)||(44865333-44865432)
chr4 (90-163)||(32992653-32992727)
chr4 (110-163)||(8034843-8034896)
chr4 (88-145)||(46329203-46329260)
chr4 (48-148)||(9936938-9937038)
chr4 (53-129)||(24234649-24234725)
chr4 (52-163)||(52254365-52254477)
chr4 (71-143)||(53496899-53496971)
chr4 (69-163)||(16581713-16581808)
chr4 (49-163)||(17618281-17618396)
chr4 (49-148)||(25414192-25414290)
chr4 (49-151)||(55256173-55256275)
chr4 (90-163)||(56440442-56440517)
chr4 (48-142)||(1730472-1730566)
chr4 (53-139)||(4911218-4911304)
chr4 (49-119)||(24827825-24827895)
chr4 (90-163)||(30938180-30938254)
chr4 (90-163)||(38838838-38838912)
chr4 (49-163)||(49262645-49262762)
chr4 (48-141)||(33619205-33619298)
chr4 (48-129)||(46545710-46545791)
chr4 (49-138)||(56409951-56410039)
chr4 (96-163)||(9693459-9693527)
chr4 (56-163)||(12793872-12793980)
chr4 (53-141)||(37980132-37980219)
chr4 (49-141)||(42281218-42281309)
chr4 (49-141)||(49225414-49225506)
chr4 (87-143)||(51969055-51969111)
chr4 (48-119)||(9241031-9241102)
chr4 (108-151)||(34844861-34844904)
chr4 (49-124)||(38206127-38206201)
chr4 (108-151)||(40058955-40058998)
chr4 (48-127)||(47044716-47044795)
chr4 (108-151)||(49287909-49287952)
chr4 (49-151)||(4185093-4185195)
chr4 (109-151)||(5609305-5609347)
chr4 (49-151)||(21344817-21344918)
chr4 (49-162)||(21660106-21660220)
chr4 (49-162)||(21668870-21668984)
chr4 (108-162)||(23284221-23284275)
chr4 (70-151)||(19531976-19532057)
chr4 (90-151)||(25852248-25852308)
chr4 (87-163)||(27104989-27105066)
chr4 (56-159)||(43728402-43728505)
chr4 (90-151)||(51535647-51535707)
[»] chr7 (85 HSPs)
chr7 (49-163)||(2446308-2446423)
chr7 (48-151)||(22760862-22760965)
chr7 (49-162)||(5273552-5273666)
chr7 (49-151)||(18056749-18056851)
chr7 (45-163)||(15137549-15137668)
chr7 (48-142)||(26459393-26459487)
chr7 (47-148)||(5579211-5579312)
chr7 (51-163)||(29385704-29385817)
chr7 (49-163)||(41487362-41487474)
chr7 (46-163)||(5075938-5076051)
chr7 (48-163)||(43590906-43591022)
chr7 (49-163)||(17040973-17041088)
chr7 (49-163)||(20335792-20335907)
chr7 (49-163)||(30579335-30579450)
chr7 (49-163)||(48125136-48125250)
chr7 (49-162)||(19553454-19553567)
chr7 (49-162)||(31835192-31835306)
chr7 (49-162)||(43215184-43215298)
chr7 (49-160)||(38374563-38374675)
chr7 (48-163)||(39631843-39631959)
chr7 (49-163)||(11720921-11721036)
chr7 (48-142)||(18363695-18363789)
chr7 (49-162)||(22932674-22932787)
chr7 (87-162)||(279916-279992)
chr7 (49-128)||(23301599-23301678)
chr7 (90-163)||(2882991-2883064)
chr7 (48-151)||(6426023-6426129)
chr7 (47-162)||(48771936-48772052)
chr7 (49-163)||(25590611-25590726)
chr7 (94-163)||(21558173-21558243)
chr7 (49-162)||(33181172-33181286)
chr7 (54-163)||(41519226-41519335)
chr7 (45-162)||(44628146-44628263)
chr7 (52-141)||(4566412-4566501)
chr7 (48-148)||(30442487-30442585)
chr7 (47-119)||(7801178-7801250)
chr7 (88-163)||(9183152-9183228)
chr7 (52-163)||(15905635-15905746)
chr7 (49-129)||(23552118-23552198)
chr7 (49-163)||(33460383-33460499)
chr7 (91-162)||(41519072-41519144)
chr7 (51-142)||(7744095-7744186)
chr7 (48-115)||(25021345-25021412)
chr7 (49-148)||(26526290-26526388)
chr7 (49-151)||(48039621-48039723)
chr7 (106-163)||(4572258-4572316)
chr7 (48-142)||(33869428-33869522)
chr7 (48-118)||(42836008-42836078)
chr7 (49-151)||(45709682-45709784)
chr7 (74-159)||(48079668-48079754)
chr7 (49-142)||(25655211-25655304)
chr7 (48-163)||(3280447-3280562)
chr7 (48-163)||(17113794-17113910)
chr7 (52-163)||(43663056-43663168)
chr7 (48-151)||(24513796-24513899)
chr7 (63-142)||(33222384-33222463)
chr7 (48-151)||(37233547-37233649)
chr7 (53-159)||(42711962-42712069)
chr7 (48-142)||(2962459-2962552)
chr7 (70-163)||(5668532-5668626)
chr7 (69-151)||(11700185-11700266)
chr7 (90-148)||(22696358-22696415)
chr7 (49-119)||(27776172-27776242)
chr7 (83-163)||(7309390-7309470)
chr7 (49-130)||(14058253-14058334)
chr7 (49-130)||(14368281-14368362)
chr7 (98-151)||(41992276-41992329)
chr7 (68-163)||(25132340-25132435)
chr7 (52-127)||(18884403-18884478)
chr7 (92-162)||(29785263-29785334)
chr7 (56-127)||(37085547-37085618)
chr7 (87-142)||(37162333-37162388)
chr7 (90-159)||(13106747-13106817)
chr7 (51-117)||(21854550-21854616)
chr7 (91-149)||(23330844-23330901)
chr7 (49-115)||(23735237-23735303)
chr7 (69-162)||(24438209-24438303)
chr7 (92-162)||(47824563-47824633)
chr7 (90-151)||(2751309-2751369)
chr7 (61-130)||(16708450-16708519)
chr7 (61-130)||(17682686-17682755)
chr7 (52-141)||(20952133-20952222)
chr7 (50-162)||(35513467-35513580)
chr7 (49-126)||(39499718-39499795)
chr7 (91-148)||(49050468-49050525)
[»] chr1 (91 HSPs)
chr1 (49-163)||(19940833-19940948)
chr1 (49-163)||(31794225-31794340)
chr1 (49-163)||(40257399-40257514)
chr1 (49-159)||(51814494-51814605)
chr1 (49-163)||(6122794-6122909)
chr1 (48-162)||(52116743-52116858)
chr1 (48-142)||(9165178-9165272)
chr1 (49-151)||(34228874-34228975)
chr1 (50-163)||(44126396-44126510)
chr1 (48-163)||(10526822-10526938)
chr1 (48-163)||(16893393-16893509)
chr1 (48-163)||(18037574-18037690)
chr1 (48-162)||(44961764-44961879)
chr1 (51-141)||(33700757-33700847)
chr1 (49-162)||(36371470-36371584)
chr1 (54-163)||(36428717-36428827)
chr1 (51-162)||(17296986-17297099)
chr1 (55-159)||(43445969-43446074)
chr1 (49-160)||(952511-952623)
chr1 (48-163)||(1094524-1094640)
chr1 (48-163)||(4280412-4280528)
chr1 (48-159)||(45266833-45266945)
chr1 (92-163)||(51281394-51281466)
chr1 (49-163)||(8177143-8177258)
chr1 (49-163)||(21267954-21268069)
chr1 (49-163)||(21547441-21547556)
chr1 (49-163)||(25297772-25297887)
chr1 (49-163)||(31605809-31605924)
chr1 (49-159)||(37400274-37400385)
chr1 (53-147)||(4824975-4825069)
chr1 (52-142)||(15786303-15786393)
chr1 (49-151)||(37046985-37047086)
chr1 (49-162)||(41508831-41508945)
chr1 (48-163)||(24019021-24019138)
chr1 (70-162)||(27476733-27476826)
chr1 (62-151)||(31383772-31383861)
chr1 (88-163)||(2799901-2799977)
chr1 (49-133)||(19528319-19528403)
chr1 (52-159)||(24730387-24730495)
chr1 (48-163)||(17745218-17745333)
chr1 (50-148)||(18459208-18459307)
chr1 (53-163)||(24047063-24047174)
chr1 (49-142)||(8904414-8904507)
chr1 (91-163)||(12587312-12587384)
chr1 (47-162)||(15064960-15065079)
chr1 (86-142)||(3265961-3266017)
chr1 (49-129)||(4566548-4566628)
chr1 (49-143)||(21694446-21694537)
chr1 (48-162)||(50901580-50901695)
chr1 (48-151)||(15581116-15581218)
chr1 (49-104)||(45235400-45235455)
chr1 (49-127)||(16169976-16170054)
chr1 (49-130)||(2219972-2220053)
chr1 (49-142)||(11063556-11063649)
chr1 (90-162)||(39966134-39966207)
chr1 (90-162)||(42949254-42949327)
chr1 (48-129)||(51703778-51703859)
chr1 (60-163)||(6127948-6128051)
chr1 (90-150)||(39964546-39964605)
chr1 (88-163)||(40810506-40810582)
chr1 (49-163)||(6650595-6650710)
chr1 (60-151)||(52336748-52336839)
chr1 (88-142)||(1247152-1247206)
chr1 (49-151)||(39012291-39012392)
chr1 (90-151)||(52029910-52029972)
chr1 (88-133)||(12370202-12370247)
chr1 (88-141)||(17439956-17440009)
chr1 (90-151)||(30677210-30677270)
chr1 (105-149)||(16539656-16539700)
chr1 (92-163)||(30203188-30203260)
chr1 (86-126)||(38947471-38947511)
chr1 (55-147)||(48400178-48400269)
chr1 (48-163)||(48619170-48619286)
chr1 (108-151)||(8077698-8077741)
chr1 (108-151)||(9500458-9500501)
chr1 (52-151)||(9964441-9964540)
chr1 (52-162)||(10150831-10150942)
chr1 (108-151)||(15059505-15059548)
chr1 (108-151)||(18646904-18646947)
chr1 (52-127)||(35692057-35692132)
chr1 (49-151)||(39714753-39714854)
chr1 (49-147)||(12259260-12259358)
chr1 (110-163)||(23471046-23471100)
chr1 (87-163)||(1600253-1600330)
chr1 (94-162)||(3799951-3800020)
chr1 (91-163)||(21392879-21392952)
chr1 (100-141)||(29753700-29753741)
chr1 (48-141)||(30689011-30689104)
chr1 (55-151)||(32916777-32916871)
chr1 (49-146)||(46146246-46146343)
chr1 (90-151)||(46607844-46607904)
[»] scaffold0172 (1 HSPs)
scaffold0172 (49-162)||(15739-15853)
[»] scaffold0194 (1 HSPs)
scaffold0194 (53-150)||(13021-13118)
[»] scaffold0517 (1 HSPs)
scaffold0517 (49-159)||(7691-7802)
[»] scaffold0291 (1 HSPs)
scaffold0291 (49-127)||(2468-2546)
[»] scaffold0002 (1 HSPs)
scaffold0002 (52-141)||(94955-95044)
[»] scaffold0047 (1 HSPs)
scaffold0047 (49-148)||(14949-15047)
[»] scaffold0006 (3 HSPs)
scaffold0006 (88-163)||(18338-18413)
scaffold0006 (56-141)||(162993-163078)
scaffold0006 (94-163)||(222554-222623)
[»] scaffold0122 (1 HSPs)
scaffold0122 (56-163)||(6883-6988)
[»] scaffold0032 (1 HSPs)
scaffold0032 (49-162)||(112282-112396)
[»] scaffold0126 (1 HSPs)
scaffold0126 (59-163)||(25308-25413)
[»] scaffold0299 (1 HSPs)
scaffold0299 (55-143)||(11534-11622)
[»] scaffold0118 (1 HSPs)
scaffold0118 (48-163)||(41594-41710)
[»] scaffold0368 (1 HSPs)
scaffold0368 (90-162)||(14927-15000)
[»] scaffold0238 (1 HSPs)
scaffold0238 (90-142)||(2694-2746)
[»] scaffold0178 (1 HSPs)
scaffold0178 (48-128)||(6631-6711)
[»] scaffold0211 (1 HSPs)
scaffold0211 (49-163)||(24053-24168)
[»] scaffold0101 (1 HSPs)
scaffold0101 (56-151)||(43306-43401)
[»] scaffold0180 (1 HSPs)
scaffold0180 (60-134)||(19953-20027)
[»] scaffold0070 (1 HSPs)
scaffold0070 (52-142)||(38885-38975)
[»] scaffold0260 (1 HSPs)
scaffold0260 (48-119)||(15326-15398)
[»] scaffold0198 (1 HSPs)
scaffold0198 (68-163)||(10778-10872)
[»] scaffold0102 (1 HSPs)
scaffold0102 (48-147)||(17061-17160)
[»] scaffold0009 (1 HSPs)
scaffold0009 (48-162)||(19809-19924)
[»] scaffold1367 (1 HSPs)
scaffold1367 (55-129)||(836-910)
[»] scaffold0008 (1 HSPs)
scaffold0008 (71-141)||(49328-49398)
[»] scaffold0576 (1 HSPs)
scaffold0576 (90-151)||(5185-5245)
[»] scaffold0244 (1 HSPs)
scaffold0244 (67-144)||(5322-5399)
[»] scaffold0236 (1 HSPs)
scaffold0236 (54-143)||(24822-24911)


Alignment Details
Target: chr3 (Bit Score: 559; Significance: 0; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 175 - 733
Target Start/End: Complemental strand, 7038353 - 7037795
Alignment:
Q  175 cttctcaattatttaagcttacgaatctaaactgcaatatccagtggcaaaaattgagagctagatggctgaaggatatggggatgcaaacactaagtac 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038353 cttctcaattatttaagcttacgaatctaaactgcaatatccagtggcaaaaattgagagctagatggctgaaggatatggggatgcaaacactaagtac 7038254  T
Q  275 tttcatgggtgtataaataagagaagaaaagaacatgaaattcttactttggagtggaatggcagaaggttgaatgaagcggacgacataaagaaagcca 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038253 tttcatgggtgtataaataagagaagaaaagaacatgaaattcttactttggagtggaatggcagaaggttgaatgaagcggacgacataaagaaagcca 7038154  T
Q  375 tcgttgatcattttcagtgacacttctcagccaggggtaacagacttatcccgactaacataaacttaaaaagaattaatagtgaagacatgatggagtt 474  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038153 tcgttgatcattttcagtgacacttctcagccaggggtaacagacttatcccgactaacataaacttaaaaagaattaatagtgaagacatgatggagtt 7038054  T
Q  475 agtgcgggaattttcataagcaaaatttcgcaaggtaatttggcagtgcgatagttctaaaagtccaagcccggatggtgtgaattttggcttgtgaaag 574  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038053 agtgcgggaattttcataagcaaaatttcgcaaggtaatttggcagtgcgatagttctaaaagtccaagcccggatggtgtgaattttggcttgtgaaag 7037954  T
Q  575 aattttgggaagatgtcaaaactgatttcatgagagttatgaccaaatttcatgcaaatggtcggatagttaaaggggtgaattgttctttcattgtctt 674  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7037953 aattttgggaagatgtcaaaactgatttcatgagagttatgaccaaatttcatgcaaatggtcggatagttaaaggggtgaattgttctttcattgtctt 7037854  T
Q  675 aatcctaaagaaaaatccagggtatatgttggacttcaggcctatatccttgattgtgt 733  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7037853 aatcctaaagaaaaatccagggtatatgttggacttcaggcctatatccttgattgtgt 7037795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 47810849 - 47810706
Alignment:
Q  20 aacttgcatggtaacacaccacataaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47810849 aacttgcatggtaacacaccacataaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcgggtt 47810750  T
Q  120 tgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  47810749 tgattctctccggtgccaatttgggtgggctatttaacttcttc 47810706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 27093437 - 27093344
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| || ||||||||||||| |  ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttg 27093344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 4844580 - 4844472
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attt 154  Q
    |||||||||||||||||||||| ||| ||   ||||||||||||||||| | |||||||||| | |||||||||||||||||||||| ||||||| ||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4844481  T
Q  155 agcttcttc 163  Q
    |||||||||    
T  4844480 agcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 4870276 - 4870168
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attt 154  Q
    |||||||||||||||||||||| ||| ||   ||||||||||||||||| | |||||||||| | |||||||||||||||||||||| ||||||| ||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4870177  T
Q  155 agcttcttc 163  Q
    |||||||||    
T  4870176 agcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 10499185 - 10499070
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| ||   ||||||| ||||| |||   |||||||||||| ||||||||||| || |||||||||||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtggg 10499086  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  10499085 ctaatttagcttcttc 10499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 31520681 - 31520570
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||||||| |||||||| ||   ||||||||||||||||| | |||||| |||||||||||||||| ||| ||||||| |||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtggg 31520582  T
Q  149 ct-atttagctt 159  Q
    || |||||||||    
T  31520581 ctaatttagctt 31520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 14186647 - 14186748
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| || ||||||||| ||| || | ||| ||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||    
T  14186647 taacccacttgggttggcctagtggtattgtcttgggacctgg-agtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtgg 14186745  T
Q  148 gct 150  Q
    |||    
T  14186746 gct 14186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 36720381 - 36720495
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||||||||||| ||   ||||||||||||||||| | |||| ||||||| |||||||||  ||| |||||| ||||||    
T  36720381 aacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtggg 36720480  T
Q  149 ct-atttagcttctt 162  Q
    ||  |||||||||||    
T  36720481 ctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 44069799 - 44069873
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  44069799 ggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttc 44069873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 10445217 - 10445100
Alignment:
Q  48 taacccacttgggttggtctggtggta-ttggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||| || |||| | ||||||| || | ||||||||||||||||| | |||||||||||| ||||||||| ||||| |||||| |||    
T  10445217 taacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtg 10445118  T
Q  147 ggct-atttagcttcttc 163  Q
    |||| |||||||||||||    
T  10445117 ggctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 14339609 - 14339725
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| |||| |||| |||||||||||||||| ||  |||||||||||||||||| ||| |||||||||| ||||||| |  |||||||||  |||||    
T  14339609 taacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgg 14339708  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  14339709 gctaatttagcttcttc 14339725  T

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Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 51903955 - 51903839
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||| |||||||  ||| |||||||||||| ||   ||||||||||||||||| |  ||||||||||| |||||||||||||| ||||||| ||||    
T  51903955 taacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgg 51903856  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  51903855 gctaatttagcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 46518628 - 46518743
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  | ||||||||||||| ||   ||||||||||||||||| |||||| ||||||||||||||||| | |||||||||| | |||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgaggggg 46518727  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  46518728 ttagtttagcttcttc 46518743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 53412948 - 53413038
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| |||||||||||||    | ||||||||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttg 53413038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 8075196 - 8075088
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attt 154  Q
    ||||||||  || ||||||| ||||| || ||||||||||||||||||| |||||| ||||||| ||||| |||  ||| ||||||||||||||| ||||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaattt 8075097  T
Q  155 agcttcttc 163  Q
    |||||||||    
T  8075096 agcttcttc 8075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 8170670 - 8170774
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    |||||||| ||||||||| || |||||||||||||    ||||||||||||||||| | |||||||||||||| ||||  ||| |||| |||||||||||    
T  8170670 ctaacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggtg 8170769  T
Q  147 ggcta 151  Q
    |||||    
T  8170770 ggcta 8170774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 47237035 - 47236935
Alignment:
Q  61 ttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc-tatttagctt 159  Q
    |||| ||||||||||||| || || |  |||||||||||||||  |||||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||    
T  47237035 ttggcctggtggtattggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaatttgggtgggcttatttagctt 47236936  T
Q  160 c 160  Q
    |    
T  47236935 c 47236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 8051214 - 8051329
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| || | ||| ||| |||| |||| | |||||||| ||| ||||| ||||||||||||||| | ||||    
T  8051214 aacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaatttagttggg 8051313  T
Q  149 ct-atttagcttcttc 163  Q
    ||  ||||||||||||    
T  8051314 ctcgtttagcttcttc 8051329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 30311306 - 30311421
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||| |||||||| || ||||||| ||||| ||   ||||||||||||||||| |||||||||||||| ||||||||  |||||||||||| | |||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgaggggg 30311405  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  30311406 ttagtttagcttcttc 30311421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 31510795 - 31510692
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| ||||||||||||||||||| ||| || ||||||||| |||||||||  | ||||| | ||| ||||||| ||||||| ||||| |||||    
T  31510795 taacccacttaggttggtctggtggtattgacttgggacttgggagtatgctcctccatacggtctaaagttcgattctccccggtgctaatttaggtgg 31510696  T
Q  148 gcta 151  Q
    ||||    
T  31510695 gcta 31510692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 2667859 - 2667977
Alignment:
Q  46 actaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggt 145  Q
    |||||| || ||||||||| |||||||||||||||| ||   ||||||||||||| ||| | |||||||||||| |||| ||||  ||| |||||| |||    
T  2667859 actaactcatttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggt 2667958  T
Q  146 gggcta-tttagcttcttc 163  Q
    |||||| ||||||||||||    
T  2667959 gggctagtttagcttcttc 2667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 12761509 - 12761627
Alignment:
Q  46 actaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggt 145  Q
    |||||||| | ||||||||||||||||||||| ||| || | |||||||||| ||||||   || ||||||||| |||| || ||||||||||||| |||    
T  12761509 actaacccgcatgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaatttaggt 12761608  T
Q  146 gggcta-tttagcttcttc 163  Q
    |||||| ||| ||||||||    
T  12761609 gggctagttttgcttcttc 12761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 27923119 - 27923005
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| |||||| |||||||||||||||| || | ||| ||||||||||||| ||  |||||||||| ||||| | || ||| ||||||||||||     
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgattcccacctgtgtcaatttgggtgga 27923020  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  27923019 ctaatttagcttctt 27923005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 28703481 - 28703387
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||||||  ||| |||| |||| ||   ||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||    
T  28703481 taacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttg 28703387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 16354968 - 16354879
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaa 138  Q
    |||||||||||||||| || ||||||||||||| |  | || |||||||||||||| || ||||||||||| ||||||||| ||||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctggtgccaa 16354879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 40777013 - 40777127
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||| ||||||||| ||| | | || | | ||||||||||||||  ||||||||||||||||||||||||  |||||||||| |||||    
T  40777013 taacccacttgggttgatctggtggtgttg-catgggacattggagtgtgctcctct-caaggtctcaggtttgattctctctagtgccaatttcggtgg 40777110  T
Q  148 gcta-tttagcttcttc 163  Q
    |||| ||||| ||||||    
T  40777111 gctagtttagtttcttc 40777127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 44743892 - 44743816
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||| | |||||||||||| |||| ||||| ||||||||||||||||| | |||||||||||||    
T  44743892 tgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 2597296 - 2597217
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    ||||||||||||||||||||||||||||||||| ||  || |||||||||||||||   |||||||||||| || |||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtctcaggttcgaatctct 2597217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 16991541 - 16991656
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||| |||||||||||||||| ||   ||||||||| ||| ||    ||||||||| |||||||||||||| |||||||||  ||||    
T  16991541 taacccatttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtctcagttttgattctctccgatgccaatttatgtgg 16991640  T
Q  148 gct-atttagcttctt 162  Q
    ||| ||||||||||||    
T  16991641 gctaatttagcttctt 16991656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 19716238 - 19716309
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttc 160  Q
    ||||||||||||||| ||||||||| |||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  19716238 ggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 30232330 - 30232445
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||  ||||||||||||| ||  |   ||| | ||||||||||| || |||||||||||  |||||||||||||||||||||| ||||    
T  30232330 aacccacttgggttgccctggtggtattggtttgcgatctggaactgtgctcctcctcatggtctcaggttccattctctccggtgccaatttggttggg 30232429  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||| ||||    
T  30232430 ctaatttagctacttc 30232445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 47454692 - 47454578
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttgg-tcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||| ||| |||||||||||||  | |||||| ||||||||||||| | |||||||||||| ||||||| ||  ||||||||| ||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttgg-agtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtggg 47454594  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  47454593 ttagtttagcttcttc 47454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 8796169 - 8796056
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| || ||||||||| |   || ||||||||| ||||||||| |||||||||| ||| ||||||||| | ||| |||||| | ||    
T  8796169 taacccacttgggttggcctagtggtattgccggggg-cttgggagtatgctcctcctcaaggtctcaagttcgattctctctgatgctaatttgagcgg 8796071  T
Q  148 gctatttagcttctt 162  Q
    ||| |||||||||||    
T  8796070 gctgtttagcttctt 8796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 26871580 - 26871478
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| ||||||| || | | ||||| | ||||||| ||| |||| ||||||||||||  ||  ||||||||||||||||    
T  26871580 aacccacttgggttggcctggtggtgttggcttgggaccttggagttttctcctcctcaaagtctgaggtttgattctacccaatgccaatttgggtggg 26871481  T
Q  149 cta 151  Q
    |||    
T  26871480 cta 26871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 4222141 - 4222238
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||  | ||||||||||||| ||   ||||||||||||||||| ||| |||| ||||| ||||||||| |||| |||||| ||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtg 4222238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 30715779 - 30715855
Alignment:
Q  86 cttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    ||||||||||||||||||| ||| || ||||||| |||||||||| |||||||||||| ||||||| |||||||||||    
T  30715779 cttgggagtgtgctcctcctcaatgtttcaggttcgattctctcc-gtgccaatttggatgggctagtttagcttctt 30715855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 37788541 - 37788448
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| |  ||||||||| ||| |  | | ||||||||||||||| |||||||||||||| |||||||||  |||||||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttg 37788448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 51766894 - 51767009
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    |||||||||||||||| ||| | |||||||| ||| | ||| |||||||||||| ||| |||||| |||| || ||||||||||||| | ||||||| ||    
T  51766894 ctaacccacttgggttagtccgatggtattgacttggatct-gggagtgtgctcttcctcaaggtttcagattcgattctctccggtactaatttggatg 51766992  T
Q  147 ggct-atttagcttctt 162  Q
    | || ||||||||||||    
T  51766993 gtctgatttagcttctt 51767009  T

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Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 40268489 - 40268603
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||| | |||||||| ||||||| || | | |||||| |||||||   ||||||||||||| ||||||| ||| ||||||||| ||||||    
T  40268489 aacccacttgggtttgcctggtggtgttggcttgggaccttggagtgggctcctctt-aaggtctcaggttcgattctccccgatgccaatttcggtggg 40268587  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  40268588 ttagtttagcttcttc 40268603  T

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Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 11612307 - 11612413
Alignment:
Q  57 tgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attta 155  Q
    |||||||| |||||||||||  ||| ||   |||||||||||||||||  ||||||||||||| ||| ||| ||||||||||||| ||| | || |||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaatttaggtcgactaattta 11612406  T
Q  156 gcttctt 162  Q
    |||||||    
T  11612407 gcttctt 11612413  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 17108974 - 17108896
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||||||||||| || ||||||||||| ||   |   ||||||||||||||||| ||||||||||||||||||||||    
T  17108974 aacccacttgggttagtttggtggtattgactggagatgtgggagtgtgctcctcctcaaggtctcaggtttgattctc 17108896  T

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Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 31789046 - 31788945
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||| ||||||||| ||   ||||||||||||||||| | |||| | |||||||||| ||| | ||| |||||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatct-ctgtgtcaatttgggtggg 31788948  T
Q  149 cta 151  Q
    |||    
T  31788947 cta 31788945  T

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Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 15048137 - 15048044
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||  |  |||||| ||||| ||   ||||| ||||||||||| |||||||||||||| |||| |||| ||||||||||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttg 15048044  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 20501738 - 20501810
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||  ||||||||||||| |||||||||| ||||||||||| | ||||| |||||||||||||    
T  20501738 gagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttgag-gggctaatttagcttcttc 20501810  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 5499483 - 5499391
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||| |||||||||||| |||  |   || ||||||||||||||  ||||||| |||||  |||||| |||||||||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtctaaggttctattctccccggtgccaattt 5499391  T

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Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 21960551 - 21960631
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||| ||||||||  |||||||||||||||| || | || |||||||||||||| | ||||||||| || |||||||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

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Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 33899653 - 33899725
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagctt 159  Q
    ||||||||||||||||| | |||||||||||| ||||||||  |||| ||||||||||| ||| |||||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatttagctt 33899725  T

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Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 45308983 - 45308903
Alignment:
Q  44 aaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgatt 124  Q
    |||| ||| ||||||||||| |||||||||||||| || || |||| |||| ||||||||| | |||||||||||| ||||    
T  45308983 aaacaaactcacttgggttgttctggtggtattggtttgggacttgtgagtatgctcctcctcgaggtctcaggttcgatt 45308903  T

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Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 17554778 - 17554841
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    |||||||||| ||||||||||||||| || | ||||||||||||| ||| ||||| ||||||||    
T  17554778 ttgggttggtttggtggtattggcttgggacctgggagtgtgctcttcctcaagggctcaggtt 17554841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 19154631 - 19154730
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||| || || ||||||||||  | | || ||||||||||||||  ||||||||||||| ||||||||  | || |||||||||||||    
T  19154631 aacccatttgggttggcctagttgtattggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaatttgggtggg 19154730  T

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Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 32651503 - 32651412
Alignment:
Q  60 gttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| || ||||||||||||| || | ||||||||||||||||| |||| |||||| || |||||||||  ||| |||||| | |||||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatgggcta 32651412  T

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Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 49397617 - 49397502
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||| ||||| |||||| ||  | |||||||||||||| |||| | |||||||| ||| |||| |||  | || |||||| |||||     
T  49397617 aacccacttgggttggtttggtgatattggtttatggcttgggagtgtgcttctcctcgaggtctcatgttcgattatcttagatgtcaatttaggtgga 49397518  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  49397517 ctaatttagcttcttc 49397502  T

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Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 54990703 - 54990817
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||| | | ||| | ||||||| || | | |||| |||||||||| |||||||||||||| |||||||  || || |||||| ||||||    
T  54990703 aacccacttgggttgtt-tagtgttgttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctcctcgatggcaatttaggtggg 54990801  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  54990802 ctaatttagcttcttc 54990817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 3427590 - 3427536
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| ||||||||||| || |||||||||  |||||||||||    
T  3427590 tgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaatttg 3427536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 16213048 - 16212934
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||||  || | ||| |||  | |||||||||||||||||||  ||||||||| |||  |||| |||||||  |||||||| |||     
T  16213048 aacccacttgggttggtctaatgatgttgccttgagacttgggagtgtgctcctccttaaggtctcaagttcaattcactccggtatcaatttggatgga 16212949  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  16212948 ctaatttagcttctt 16212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 33270541 - 33270455
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||||||||| ||| || | |   |||||| ||| ||  |||||||||||||| ||||||||||||| |||||||    
T  33270541 ttgggttggtctggtggtattgacttgggacctctaagtgtgttccacctaaaggtctcaggtttcattctctccggtggcaatttg 33270455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 18316573 - 18316497
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    ||||||||||||||||||||||||  |||||| || | | ||||||||||||| | |||||||| ||||| |||||||    
T  18316573 acccacttgggttggtctggtggtgctggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcgattctc 18316497  T

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Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 27259185 - 27259254
Alignment:
Q  73 tattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||| || | ||||||||||||||||| | |||| ||||||||||||||||| | || |||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaatttg 27259254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 34062626 - 34062531
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctc--ctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| |  ||| |||||||||     ||||||||||||||  |||| ||||||||||||||  |||||||| ||||||||||||    
T  34062626 aacccacttgggttggcccagtgatattggcttgaaatttgggagtgtgctctcctcctcaaggtctcaggttcaattctctctggtgccaatttg 34062531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 42799821 - 42799754
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    |||||||||||||| |||||||| ||||||| || | | ||||||||||||| | ||||||||||||||    
T  42799821 cccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 42799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 52770020 - 52769944
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||||||   |||||||||||| ||||||||   ||| |||||| |||||||| |||||||||||||    
T  52770020 tgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 53863943 - 53863852
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||  |||||| | ||||||| || | | ||||||||||||| | |||||||| |||||  |||||||| |||||||||||    
T  53863943 aacccacttgggttgtcctggtgatgttggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcaattctctctggtgccaattt 53863852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 3054993 - 3055064
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||||||| |||||||| ||||||| || | | |||| ||||| |||| |||| |||||||||    
T  3054993 taacccacttgggttggcctggtggtgttggcttgggaccttggagcgtgcttctcctcaagatctcaggtt 3055064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 17554494 - 17554553
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||| ||||||||  |||||||||||||| |||| ||||| ||| |||||||||||||||    
T  17554494 gagtctgctcctcttcaaggtctcaggttggattatctccagtgtcaatttgggtgggct 17554553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 39253736 - 39253787
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaat 139  Q
    ||||||||||||||||  |||||||||||||| ||||||||| | |||||||    
T  39253736 tgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 43303758 - 43303872
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||| ||||||||  ||||||  | | | |||| |||||||||  || ||||||||||||||||||| ||||||| ||| | ||||||    
T  43303758 aacccatttgggttggcctggtggtgatggcttgagaccttggagcgtgctcctctcca-ggtctcaggtttgattctccccggtgctaatatcggtggg 43303856  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||| ||||||||    
T  43303857 ctagtttggcttcttc 43303872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 26481927 - 26482009
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccg 131  Q
    |||||||||||||| |  |||||||| |||||| || | || |||||||||||||| ||| || | ||||| |||||||||||    
T  26481927 aacccacttgggttagcttggtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgattctctccg 26482009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 34844371 - 34844468
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||  |||||| | |||||||  | | | ||||||||||||||  |||||||||||||| ||||| |||| | |||||||| |||||    
T  34844371 aacccacttgggttgccctggtgttgttggcttgagaccttggagtgtgctcctct-caaggtctcaggttcgattccctccagagccaatttcggtgg 34844468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 39976507 - 39976441
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctca 115  Q
    ||||||||| |||||||  |||||||||| ||| || |||| |||||||||||| | ||||||||||    
T  39976507 aacccacttaggttggttcggtggtattgacttgggacttgagagtgtgctccttctcaaggtctca 39976441  T

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Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 40063618 - 40063712
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||   | || |||||||||| ||   || |||| |||||||||  ||||||||| ||| |||||||||| |||||||||||    
T  40063618 taacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttg 40063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 13808958 - 13808881
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||||||||||||||  ||||| ||| ||   ||| ||||||||||||| | ||||||||||||  ||||||||    
T  13808958 ccacttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctc 13808881  T

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Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 26411557 - 26411658
Alignment:
Q  61 ttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagctt 159  Q
    ||||||||||| ||||| ||| || | || |||||||||||| | ||| || ||| ||| ||||||   |||||||||||||| |||||| |||||||||    
T  26411557 ttggtctggtgatattgacttgggacctgagagtgtgctccttctcaatgtttcaagttcgattcttctcggtgccaatttggatgggctaatttagctt 26411656  T
Q  160 ct 161  Q
    ||    
T  26411657 ct 26411658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 30194981 - 30195034
Alignment:
Q  60 gttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtct 113  Q
    ||||||||||||||||||| || || ||||||||||||||| ||| | ||||||    
T  30194981 gttggtctggtggtattggtttaggacttgggagtgtgctcatcctcgaggtct 30195034  T

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Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 30510272 - 30510195
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    ||||||||||||  ||||||||| |||||| || | | ||||| ||||||| | | |||||||||||| |||||||||    
T  30510272 ccacttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctc 30510195  T

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Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 31608561 - 31608520
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    ||||||||||||||||| | ||||||||| ||||||||||||    
T  31608561 tgggagtgtgctcctcctcgaggtctcagatttgattctctc 31608520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 33279034 - 33278981
Alignment:
Q  111 tctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||||||||||||| |||||| | |||| | |||||||||||||    
T  33279034 tctcaggtttgattctctccggtgtcaatttagatgggataatttagcttcttc 33278981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 36010781 - 36010830
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgcca 137  Q
    ||||||||||||||||| ||| |||||| ||| ||||||||| |||||||    
T  36010781 tgggagtgtgctcctcctcaaagtctcaagttcgattctctctggtgcca 36010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 49452910 - 49452943
Alignment:
Q  86 cttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||||||||| ||||||||||||||    
T  49452910 cttgggagtgtgctcctcctcaaggtctcaggtt 49452943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 53234054 - 53234013
Alignment:
Q  110 gtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  53234054 gtctcaggttcgattctctctggtgccaatttcggtgggcta 53234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 2e-36; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 3058125 - 3058011
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||||| ||| | |||||| ||||||    
T  3058125 aacccatttgggttggtctggtggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctcttcggcgtcaatttaggtggg 3058026  T
Q  149 ctatttagcttcttc 163  Q
    |||||||||||||||    
T  3058025 ctatttagcttcttc 3058011  T

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Target: chr8; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 44780190 - 44780075
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || |||| |||||||| || ||||||||||||||||||| |||||||||||||||||||| |||  ||| |||||||||||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtggg 44780091  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  44780090 ctaatttagcttcttc 44780075  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 968362 - 968476
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||| ||||| |||||||||||||||| || | ||||||||||||||||| | |||||||||||| ||||||||||| ||||||||| ||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtggg 968461  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  968462 ctaatttagcttctt 968476  T

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Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 16843850 - 16843756
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| | |||||||||||||||||||    
T  16843850 gtggtattggcgtaggtcttgggagtgtgctcctccgcaagatctcaggttcgattctctccggtgtcaatttagatgggctatttagcttcttc 16843756  T

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Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 11793597 - 11793482
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| ||||| || |||| || | | ||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||    
T  11793597 aacccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattcttcccggtgccaatttgggtggg 11793498  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  11793497 ctagtttagcttcttc 11793482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 28783060 - 28783175
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  |||||||||||||||  | | ||||||||||||||||| |||||||||| ||| |||||||  |||||||||||||||||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtggg 28783159  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  28783160 ctaatttagcttcttc 28783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 2203494 - 2203603
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||||||||||||| || ||||||||||||| || | ||||||||||||||||| |||||||||||| |  |||||| ||||||||||||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggct 2203593  T
Q  151 -atttagctt 159  Q
     |||||||||    
T  2203594 aatttagctt 2203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 11819775 - 11819891
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||  || ||||||| ||||| || ||||||||||||||||||| |||||||||||||| ||||| |||  ||| ||||||||||||    
T  11819775 taacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgg 11819874  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  11819875 gctaatttagcttcttc 11819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 16852340 - 16852455
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| || | ||||||||||||||||| | |||||||||||| |||||||    |||||||||| ||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtggg 16852439  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  16852440 ctattttagcttcttc 16852455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 18540298 - 18540413
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| || | ||||||||| || |||| |||||||||||||| ||||||||| |||||||||||| | |||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagaggg 18540397  T
Q  149 ct-atttagcttcttc 163  Q
     | |||||||||||||    
T  18540398 ttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 29431011 - 29431126
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||| ||||||||||| || |||||||||||||||||||   ||| |||||||| ||||||||  ||||| |||||| |||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtggg 29431110  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  29431111 ctaatttagcttcttc 29431126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 3624582 - 3624690
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||||||||||||| || ||||||||||||| || | ||||||||||||||||  |||||||||||||| |||||||||||| | |||||| ||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccgg-gtcaatttaggtgggct 3624680  T
Q  151 -atttagctt 159  Q
     |||||||||    
T  3624681 aatttagctt 3624690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 36042984 - 36043072
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatt 140  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||| ||||||| ||| ||||||||| |||||| ||| |||||||||    
T  36042984 ccacttgggttgggctggtggtattggcttggatcttgggagtgtgttcctccgtaagatctcaggttcgattctttccagtgccaatt 36043072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 40591732 - 40591827
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| ||||| |||||||||||||||| || |||||||||||||||||   ||| ||||||||||||||||||| || ||||||||| |||||    
T  40591732 aacccacttgtgttggcctggtggtattggcttcggacttgggagtgtgctcct---caaagtctcaggtttgattctcttcgatgccaatttaggtgg 40591827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 8484999 - 8485114
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||||||||||| |||| || | || |||||||||||||    ||||||||  || ||||||||||||||||||||| ||||||    
T  8484999 aacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtggg 8485098  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  8485099 ctaatttagcttcttc 8485114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 23361726 - 23361623
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  |||||||||||| ||| ||   ||||||||||||||||| ||||||||||||||  |||||||| |||| |||||| |||||    
T  23361726 taacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgg 23361627  T
Q  148 gcta 151  Q
    ||||    
T  23361626 gcta 23361623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 35287715 - 35287814
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||| || |||||||| |||||||  |  || ||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||||||    
T  35287715 taacccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttgggtgg 35287814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 50 - 159
Target Start/End: Complemental strand, 29858124 - 29858014
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    |||||||||| |||| |||||||||||||||| || |  |||||||||||||||| | |||||||||||| ||||| |  |||||||||||| |||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggc 29858025  T
Q  150 t-atttagctt 159  Q
    | |||||||||    
T  29858024 taatttagctt 29858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 6436631 - 6436555
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattc 125  Q
    |||||||||||||||  |||||||||||||||| || ||| ||||||||||||||||||||||||||| || |||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgattc 6436555  T

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Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 35641977 - 35641865
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||||| |||||  |  |||||||||||||||||| | | |||||||||| |||||||||| |  ||||||| | ||||    
T  35641977 aacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctccagaaccaatttagatggg 35641878  T
Q  149 ct-atttagcttc 160  Q
    || ||||||||||    
T  35641877 ctaatttagcttc 35641865  T

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Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 6536540 - 6536635
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||| || | | ||||||||||||||| ||||||||||||||  |||||||| ||||||||||| |||||| | |||||||||||||    
T  6536540 gtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

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Target: chr8; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 27750729 - 27750844
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||  || ||||||| ||||| || ||||||||||||||||||| |||||||||||||| ||||| |||  ||| |||||||| |||    
T  27750729 taacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgg 27750828  T
Q  148 gct-atttagcttctt 162  Q
     || ||||||||||||    
T  27750829 actaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 19703563 - 19703485
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||||||||||||| || ||||||||||||| || | || |||||||||||||| |||||||||||||| |||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

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Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 26688865 - 26688979
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| ||||||| || | | ||||||||||||||| ||||||||||||||   ||||  |  ||| |||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggtggg 26688964  T
Q  149 cta-tttagcttctt 162  Q
    ||| |||||||||||    
T  26688965 ctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 33017213 - 33017307
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||  ||||||||| |  | ||| ||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  33017213 taacccacttgggttggccttgtcatattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg 33017307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 18897166 - 18897279
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||| |||| || || | |  |||||||||||||| |||||||||| ||| ||||||  | ||||||||||| ||||||    
T  18897166 aacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaatttaggtggg 18897265  T
Q  149 ctatttagcttctt 162  Q
     |||||||||||||    
T  18897266 atatttagcttctt 18897279  T

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Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 34966923 - 34966811
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    ||||||| ||||||||| ||||||||||||  | |||||||||||||| |||  | |||||||| |||||||| || |||||| || ||| ||||||||     
T  34966923 ccacttgagttggtctgatggtattggcttgagacttgggagtgtgctactcttcgaggtctcaagtttgattatccccggtggcattttaggtgggcta 34966824  T
Q  151 atttagcttcttc 163  Q
    |||||||||||||    
T  34966823 atttagcttcttc 34966811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6530806 - 6530896
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaat 139  Q
    ||||||||||||||||| |||||||| ||||||| || | | ||||||||||||| | ||| |||||||||| ||||||| |||||||||||    
T  6530806 taacccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcct-ctcaatgtctcaggttcgattctccccggtgccaat 6530896  T

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Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 20994534 - 20994419
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcct-ccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||| || ||||||||| ||| || | ||||||||||||||| || ||| |||||||| | |||| |||| ||| ||||||||| |||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttggatgg 20994435  T
Q  148 gct-atttagcttctt 162  Q
    ||| ||||||||||||    
T  20994434 gctaatttagcttctt 20994419  T

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Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 22269009 - 22268911
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| ||||||| || | | |||||||||| || | |||||||||| |||||||| ||||||||||| |||| ||||||    
T  22269009 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctccggtgcccatttaggtggg 22268911  T

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Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 13129668 - 13129762
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||||||||||| | |  |||| ||||| || || |||||||||| |||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  13129668 aacccacttgggttagcccagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgg 13129762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 12988428 - 12988521
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||| |||| || ||||||||||||| |  | ||| ||||||||||||| |||||| ||||||| ||| ||||| ||||||||||||    
T  12988428 aacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaatttg 12988521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 28787529 - 28787473
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||| |||||||||||||||||||||| || |||||||||| ||||||    
T  28787529 agtgtgctcctcctcaaggtctcaggtttgattctccccagtgccaatttaggtggg 28787473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 33727950 - 33727835
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||  || ||||||| || ||  | ||||| ||||||||||||| |||||||||||||| ||||| |||  ||| |||||||| |||    
T  33727950 taacccatttgggttgccctagtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgg 33727851  T
Q  148 gct-atttagcttctt 162  Q
    ||| ||||||||||||    
T  33727850 gctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 30483960 - 30483867
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| |  ||||||||||||| ||   ||||||||||||||||| ||  ||||||||||  ||||||||  |||||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaatttg 30483867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 32992778 - 32992881
Alignment:
Q  49 aacccacttgggttggtctggtggtattggcttt--ggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||||||||| | |||||||   || | | ||||||||||||||| ||||||| ||||||||| |||| |||||  ||||||| |||    
T  32992778 aacccacttgggttggtctggtgatgttggcttgtgggaccttggagtgtgctcctcctcaaggtcccaggtttgactctccccggt-tcaatttgagtg 32992876  T
Q  147 ggcta 151  Q
    |||||    
T  32992877 ggcta 32992881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 40136997 - 40136938
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||    
T  40136997 ggagtgtgctcctct-caaggtctcaggtttgattctc-ccggtgccaatttcggtgggcta 40136938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 4435979 - 4436090
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-a 151  Q
    ||||| |||||  ||| ||||||||||||  | | |||||| |||||||||| |||||||||||  | |||||||||| |  |||||||||||||||| |    
T  4435979 cacttcggttgacctgctggtattggcttgagacatgggagagtgctcctcctcaaggtctcagactcgattctctcctgccccaatttgggtgggctaa 4436078  T
Q  152 tttagcttcttc 163  Q
    ||||| ||||||    
T  4436079 tttagtttcttc 4436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 8794428 - 8794329
Alignment:
Q  42 ataaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||| | ||||||||| ||||  | ||||||||||||| |  | ||| ||||||||||||| || ||||||||||| ||||||||| ||| |||||||    
T  8794428 ataaacaaccccacttggattggcatagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaattt 8794329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 11492110 - 11492035
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    ||||||||||||||| | | |||||| ||||| |||||||| | ||| ||||||||||||||| ||||||||||||    
T  11492110 tgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 43969074 - 43968976
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  || |||||||||||| || ||| |||||||||||||||   ||||||||| || |||| |||| ||||  ||||| |||||    
T  43969074 aacccacttgggttggcatgatggtattggcttggggcttaggagtgtgctcctccctgaggtctcagattcgattatctctggtgttaatttaggtgg 43968976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 35690129 - 35690048
Alignment:
Q  60 gttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||| || ||||||||||||| ||   |||| || ||||||||| |||||||||||||| ||||||||| |||| ||||||    
T  35690129 gttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 36205198 - 36205279
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggt 133  Q
    ||||||||||||||||| || |||||| ||  |   ||||||||||||||||| |||||||||| ||| ||||||| |||||    
T  36205198 ccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctccccggt 36205279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 40872918 - 40872978
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||||  |||||| | |||||  |||||||||||||||||||| |||||||||    
T  40872918 gagtgtgctcctcttcaaggttttaggttccattctctccggtgccaatttaggtgggcta 40872978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 43533797 - 43533697
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||| | ||||||||| |||||||  | | | ||||||||||  ||| |||||||||| |||  |||||| |||| || ||||||||||    
T  43533797 ctaacccacttgggtggatctggtggtgttggcttgagaccttggagtgtgcttatcctcaaggtctcacgttcaattctccccggcgctaatttgggtg 43533698  T
Q  147 g 147  Q
    |    
T  43533697 g 43533697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 3305225 - 3305162
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||| |||||||||| ||||||||||  || |||| |||| ||||||||||| |||||||||    
T  3305225 tgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggcta 3305162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 3826853 - 3826774
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    |||||||||||||||| || |||||||||||||     ||| |||||||||||||| | || ||||||||| ||||||||    
T  3826853 aacccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctccacgagatctcaggttcgattctct 3826774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 5264544 - 5264611
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcag 116  Q
    |||||||||||||||| || ||||||||||||| |  | ||||| ||||||||||| | |||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 8059632 - 8059747
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||| |||||||| ||| |    || ||||||| |||||| ||||||||||||||  |||||| | | || ||||||| ||| |    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaatttgagtgag 8059731  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  8059732 ctagtttagcttcttc 8059747  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 22193401 - 22193358
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccg 131  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||    
T  22193401 tgggagtgtgctcctcctcaaggtcttaggttcgattctctccg 22193358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 23874459 - 23874388
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||||||| || ||||||||||||| || | ||||| | ||| ||||| | ||||||||||||    
T  23874459 taacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggtt 23874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 7140726 - 7140823
Alignment:
Q  66 ctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||||| ||   |||| |||||||||||| | || |||||| || |||||||| ||||  ||||||||||||||| ||||| |||||||    
T  7140726 ctggtggtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctct-cggtatcaatttgggtgggctaatttaccttcttc 7140823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 11518955 - 11518877
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattc 125  Q
    |||||||||||||||| | || ||||||| ||||| |  ||||||||||| | ||||| |||||||| ||||| |||||    
T  11518955 ctaacccacttgggttagcctagtggtataggcttggaacttgggagtgtacccctcctcaaggtcttaggttcgattc 11518877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 35672536 - 35672486
Alignment:
Q  114 caggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||||||| |||||||| ||| || |||||||||||||    
T  35672536 caggtttgattctctccggtgtcaatttggatggactaatttagcttcttc 35672486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 3734786 - 3734726
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  3734786 ggagtttgctcctcca-aaggtctcaggttcgattccctctggtgccaatttcggtgggcta 3734726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 12281493 - 12281586
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||| | |||||| ||| ||||||||||||| || | || |||||||| ||||| | ||||||||| || |||| |||||| || ||||||    
T  12281493 taacccattagggttgttcttgtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctccgatgtcaattt 12281586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 36034540 - 36034495
Alignment:
Q  106 caaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||| ||||||||||||| |||| |||||| |||||||||    
T  36034540 caaggtctcaagtttgattctctctggtgtcaatttaggtgggcta 36034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 43594349 - 43594292
Alignment:
Q  94 tgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||| |||||| |||||||||||||| |||||||||  ||| |||||||| |||||||    
T  43594349 tgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggcta 43594292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 9e-35; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 42602554 - 42602669
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| || | ||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtggg 42602653  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  42602654 ctaatttagcttcttc 42602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 37480075 - 37480190
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| || | || |||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtggg 37480174  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  37480175 ctaatttagcttcttc 37480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 42327471 - 42327369
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| || | ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtggg 42327372  T
Q  149 cta 151  Q
    |||    
T  42327371 cta 42327369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 19016031 - 19016145
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||||| ||||||||||||  | ||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||  || ||    
T  19016031 aacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtagg 19016130  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  19016131 ctaatttagcttctt 19016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 23052600 - 23052484
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| |||||| |||||||||||||||| || |||||||||||||| |||| |||||||||||||| ||||||| |  |||||| |||||||||    
T  23052600 taacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgg 23052501  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||| ||||||    
T  23052500 gctaatttagtttcttc 23052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 19244109 - 19244211
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||||  |||||||| ||| || | || |||||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtggg 19244208  T
Q  149 cta 151  Q
    |||    
T  19244209 cta 19244211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 1729816 - 1729908
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||| || ||||||||||||| || ||||||||||||||||||| | |||||| || |||||||||||| |||||||||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctggtgccaattt 1729908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 21213777 - 21213884
Alignment:
Q  57 tgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-ttta 155  Q
    ||||||||||||||||||||||||| || | |||||||||| ||||||   |||||||||||| ||||||| ||||||||||||| ||||||||| |||     
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggctagtttt 21213876  T
Q  156 gcttcttc 163  Q
    ||||||||    
T  21213877 gcttcttc 21213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 7799111 - 7798997
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||  |||||||||||||||| || ||||||||||||||||||| | || |||||| || |||||||||| ||||||||||  ||||     
T  7799111 aacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagtggc 7799012  T
Q  149 ctatttagcttcttc 163  Q
      |||||||||||||    
T  7799011 taatttagcttcttc 7798997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 11251087 - 11251189
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| ||||||  | ||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||| |    
T  11251087 aacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgtg 11251186  T
Q  149 cta 151  Q
    |||    
T  11251187 cta 11251189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 12086203 - 12086091
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||||||  ||||| |||||||||||||||| || | ||| ||||||||||||| ||||||||| |||| ||||| ||||||||| ||||| ||||||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggct 12086104  T
Q  151 -atttagcttctt 162  Q
     ||||||||||||    
T  12086103 aatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 41908715 - 41908599
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| |||||||| | || ||  | | | ||||||||||||||| |||||||||| ||| |||| || |||||||||||||||||||    
T  41908715 taacccacttgggttggcctggtggtgtcggtttgagaccttggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgg 41908616  T
Q  148 gcta-tttagcttcttc 163  Q
    |||| ||||||||||||    
T  41908615 gctagtttagcttcttc 41908599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 29503271 - 29503385
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || |||||||||| || || | ||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||  |||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc-ccggtgtcaatttaagtggg 29503369  T
Q  149 c-tatttagcttcttc 163  Q
    |  |||||||||||||    
T  29503370 caaatttagcttcttc 29503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 34041664 - 34041549
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||| ||| ||   || |||||||||||||| |||||||||||||||||||| ||| |||||||||||| | |||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaatttgaggggg 34041565  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  34041564 ttagtttagcttcttc 34041549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 11062359 - 11062453
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||| ||||||||| |  |||||||||||||| |||| ||||||||||||||||||||||||  ||| |||||||    
T  11062359 taacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaatttg 11062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 42922414 - 42922508
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgc-aaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| || ||||||||||||| |  | ||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttg 42922508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 19322768 - 19322861
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||| ||| |||||||||| || || | ||||||||||||||||  ||||||||| ||||||||||||||  |||||||||||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttg 19322861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 1435064 - 1435178
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  | |||||| |||||| ||  || |||||||||| |||| |||||||||| ||| ||||||||| |||| |||||||||||||    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctca-gttcgattctctctggtgtcaatttgggtggg 1435162  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  1435163 ctaatttagcttcttc 1435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 39714992 - 39715103
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  ||||||||||| ||| || | ||||||||||||||||| | |||||||||||| ||||||| || |  ||||||| ||||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtggg 39715091  T
Q  149 ct-atttagctt 159  Q
    || |||||||||    
T  39715092 ctaatttagctt 39715103  T

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Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 16918653 - 16918539
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    ||||||||||||||| || |||||||||| || ||   ||||||||||||||||| |||||||| ||||| ||||||||| ||||||| ||||| |||      
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctggtgccactttggatggtt 16918554  T
Q  150 ta-tttagcttcttc 163  Q
    || ||||||||||||    
T  16918553 tagtttagcttcttc 16918539  T

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Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 21195752 - 21195638
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||  || ||||||| ||||| |  ||||||||||||||||||| |||||||||||||| ||||| |||  ||| |||||||| ||||    
T  21195752 aacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggg 21195653  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  21195652 ctaatttagcttctt 21195638  T

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Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 29197452 - 29197350
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  ||||||||||| ||| || |||||||||||||||||||   | |||||| ||| ||||||  ||||||||||||| ||||||    
T  29197452 aacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtggg 29197353  T
Q  149 cta 151  Q
    |||    
T  29197352 cta 29197350  T

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Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 30359657 - 30359766
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||||  ||||||| ||||||| || | | ||||||||||||||| ||||||||||  || ||||||| || ||||||||||||||||||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctca-tttcgattctccccagtgccaatttgggtgggcta 30359755  T
Q  152 -tttagcttct 161  Q
     ||||||||||    
T  30359756 gtttagcttct 30359766  T

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Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 40416467 - 40416373
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||||| ||| |  | ||||||| |||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  40416467 taacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttg 40416373  T

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Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 13803494 - 13803588
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||| |||||||| ||| ||| |||||||||  | ||| ||||||||||||||| |||||||||||||| |||| |||| | ||||||||||    
T  13803494 taacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaatttg 13803588  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 37756046 - 37755932
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    |||||||||||||||  ||||||||||||||| || | ||||| ||||||||| | | |||||||| ||| || || ||| | |||||||||| ||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggc 37755947  T
Q  150 t-atttagcttcttc 163  Q
    | |||||||||||||    
T  37755946 taatttagcttcttc 37755932  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 12517833 - 12517715
Alignment:
Q  49 aacccactt-gggttggtctggtggtattg---gctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttggg 144  Q
    ||||||||| |||||||||||||||| |||   |||| || | | ||||| ||||||||| |||||||||| ||||||||||| | |||||||| |||||    
T  12517833 aacccacttcgggttggtctggtggtgttgttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctccctggtgccaa-ttggg 12517735  T
Q  145 tgggct-atttagcttcttc 163  Q
    |||||| |||||||||||||    
T  12517734 tgggctaatttagcttcttc 12517715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 37971931 - 37972008
Alignment:
Q  85 tcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttct 161  Q
    |||| |||||||||||||   ||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  37971931 tctttggagtgtgctccttgtcaaagtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 45026743 - 45026836
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||| |||||||  | ||| || ||| |  ||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  45026743 aacccacttggtttggtctattagtaatgacttggaacttaggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaatttg 45026836  T

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Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 3697475 - 3697384
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||||||| |||||||||||| || | | |||| |||||||| | ||||||||| |||| |||||||  ||||||||||||    
T  3697475 aacccacttgggttggtctgatggtattggcttgggaccttggagagtgctcct-ctcaaggtctctggttcgattctcctcggtgccaattt 3697384  T

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Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 18825340 - 18825455
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||   |||||||| ||||||| || | | ||||||||||||||  |||||||||| |||||||| || ||||||||||||| ||| |    
T  18825340 taacccacttgggtttacctggtggtgttggcttgggacctaggagtgtgctcctct-caaggtctcaagtttgattttccccggtgccaatttcggtag 18825438  T
Q  148 gcta-tttagcttcttc 163  Q
    |||| || |||||||||    
T  18825439 gctagttgagcttcttc 18825455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 16525177 - 16525275
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| ||| |||| ||||||| || | | |||||||||  |||  |||||||||||||| ||||||| ||||||||||||| |||||    
T  16525177 taacccacttgggttggcctgatggtgttggcttgggacgttggagtgtgcgactct-caaggtctcaggttcgattctccccggtgccaatttcggtgg 16525275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 30808723 - 30808612
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||| |||||||||  | | || || | ||||||||| ||||||||||| || |||||||| |||| |||| || |||||     
T  30808723 aacccacttgggttggtctggtgatattggcttgagacctgagaatatgctcctcctcaaggtctcagtttcgattctcttcggtaccaacttaggtgga 30808624  T
Q  149 ct-atttagctt 159  Q
    || |||||||||    
T  30808623 ctaatttagctt 30808612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 32106565 - 32106668
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| |||||||| ||| ||| || | | ||||||||||||  | ||||||||  || | |||||||||||||||||||||  ||||    
T  32106565 taacccacttgggttggcctggtggtgttgacttgggaccttggagtgtgctccctctcaaggtcttgggctcgattctctccggtgccaatttcagtgg 32106664  T
Q  148 gcta 151  Q
    ||||    
T  32106665 gcta 32106668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 28846690 - 28846787
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggt 145  Q
    |||||||||| ||||| ||| ||||||||| ||| || | ||||||||||||||||| | | |||||||||| |||| || ||| || ||||||||||    
T  28846690 taacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgattatcaccgatgtcaatttgggt 28846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 7667542 - 7667490
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctcc 104  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||||||||    
T  7667542 ccacttgggttggtcgggtgatattggcttgggacttgggagtgtgctcctcc 7667490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 14780509 - 14780621
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    ||||||||||||||| ||| |||||| |||  |  ||| || |||||||||   |||||||||||||| ||| ||| ||| |||||||||| |||||||     
T  14780509 ccacttgggttggtccggtagtattgacttgagatttgagaatgtgctccttttcaaggtctcaggttcgatcctccccgatgccaatttgagtgggcta 14780608  T
Q  151 atttagcttcttc 163  Q
    |||||||||||||    
T  14780609 atttagcttcttc 14780621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 25637190 - 25637266
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||| | | |||||||||||| | ||||||||| ||||||||| |||||||| ||||| |||||||    
T  25637190 tgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttc 25637266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 4262354 - 4262295
Alignment:
Q  73 tattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccgg 132  Q
    ||||||||| || | ||| ||||||||||||| |||||||||||||| ||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctccgg 4262295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 14500316 - 14500391
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    ||||||||||||||||| | ||||||||| || ||||||||| |||||||||||| | ||| || |||||||||||    
T  14500316 tgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggggatagtttagcttctt 14500391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 26482093 - 26482207
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| |||||| ||| |||| ||||||| || | | ||||||||||||| | |||||||||||||| |||||||  | ||||||||||  |||||    
T  26482093 aacccacttaggttggcctgatggtgttggcttgggacctaggagtgtgctcct-ctcaaggtctcaggttcgattctcctcagtgccaatttcagtggg 26482191  T
Q  149 ct-atttagcttcttc 163  Q
    || |||| ||||||||    
T  26482192 ctaatttggcttcttc 26482207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 26545840 - 26545919
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    ||||||||||||||||| |||||||||| |||| ||   ||| ||||||||||| | | |||||||| ||||||||||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 30410605 - 30410510
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||| || | | ||||||||||||||| ||||| |||| ||| |||| |||| |||||||||||| | ||| || ||||||||||||    
T  30410605 gtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggttagtttagcttcttc 30410510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 12994461 - 12994376
Alignment:
Q  39 cacataaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattc 125  Q
    |||||||| |||||| |||| |||||||| ||||||||| ||| || | |||||||||||||||||  ||||||||| ||| |||||    
T  12994461 cacataaa-taacccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 20217863 - 20217929
Alignment:
Q  96 tgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttctt 162  Q
    ||||||||| |||||||| ||||| ||||||  |  ||||||||||| |||||||||||||||||||    
T  20217863 tgctcctcctcaaggtcttaggttcgattcttccatgtgccaatttgagtgggctatttagcttctt 20217929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 18372304 - 18372361
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| ||||| ||| | |||||| |||||||||||||||||| |||||||||||||||    
T  18372304 gagtatgctcatcctcgaggtcttaggtttgattctctccggagccaatttgggtggg 18372361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 23140981 - 23140896
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||  |||||||||||| || | |||| ||||| |||||| ||| ||||| |||| |||||||||| |||| |||||    
T  23140981 ttgggttggtctaatggtattggcttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctccagtgctaattt 23140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 23552771 - 23552686
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||  |||||||||||| || | |||| ||||| |||||| ||| ||||| |||| |||||||||| |||| |||||    
T  23552771 ttgggttggtctaatggtattggcttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctccagtgctaattt 23552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 33569935 - 33569842
Alignment:
Q  49 aacccacttgggttggtctggtggta-ttggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||| ||||||||  | |||||| ||||||| || ||||| ||||||||| ||| | |||||||||||| ||||||||| ||||| |||||    
T  33569935 aacccacatgggttggcttagtggtaattggcttaggacttggaagtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaattt 33569842  T

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Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 23787155 - 23787111
Alignment:
Q  107 aaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  23787155 aaggtctcaggtttgattccctctggtgccaatttcggtgggcta 23787111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 342395 - 342493
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| |||||||  | | | ||||||| ||| | |||||||||||| |||  ||||||  |||||||||||| ||||||    
T  342395 aacccacttgggttggcctggtggtgttggcttgtgaccttggagtgtactcat-cgcaaggtctcaagttcaattctcctcggtgccaatttcggtggg 342493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 13747706 - 13747608
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||  | ||||| ||||||| || | | ||||| ||||||||| ||||||||||||||||| || | |||||||| |||| |||||||||    
T  13747706 ccactggggttggcttagtggtgttggcttgggaccttggagtatgctcctcc-caaggtctcaggtttgaatccccccggtgccgatttcggtgggcta 13747608  T

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Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 26276398 - 26276469
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    ||||||||||||| |||||||||||||| | |||||  ||||| |||||| ||||| || ||||||||||||    
T  26276398 agtgtgctcctcctcaaggtctcaggttcgtttctcgtcggtgtcaatttaggtggactgatttagcttctt 26276469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 33839297 - 33839242
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    ||||||||||||||||| ||||||||||||||  ||||| || ||||| |||||||    
T  33839297 tgggagtgtgctcctcctcaaggtctcaggttcaattctttctggtgctaatttgg 33839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 2144452 - 2144522
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattct 126  Q
    |||||||| ||||||||||||||||| ||   |||||||||| || ||||||| || ||||||| ||||||    
T  2144452 ttgggttgatctggtggtattggcttgggatatgggagtgtgttcttccgcaatgtttcaggttcgattct 2144522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 6099553 - 6099480
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||||  |||||||||||||| ||||||| ||| ||||||| | ||||||||| ||| ||||||||    
T  6099553 ggagtgtgctcctct-caaggtctcaggttcgattctccccgctgccaatatcggtgggctagtttggcttcttc 6099480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 32687484 - 32687558
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattct 126  Q
    |||||||||||| ||| |||||||| | || || |||| ||||||| |||||| | |||||||||||| ||||||    
T  32687484 ccacttgggttgttcttgtggtattagtttgggacttgagagtgtgttcctcctcgaggtctcaggttcgattct 32687558  T

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Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 5147756 - 5147675
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||||||||||||||| ||||||||| |||  |   ||||||| ||||||| | ||||||||| | || |||||||||    
T  5147756 taacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctc 5147675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 17737692 - 17737608
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||| | |||||||||| ||  | ||||||||||||||||||| |||||||||| ||| |||| || |  ||||||||||    
T  17737692 ttgggttggt-tagtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgattatccctagtgccaattt 17737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 22363227 - 22363170
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttggg 144  Q
    |||||| |||||||| || |||| ||| ||||| ||||| ||||||||||||||||||    
T  22363227 ttgggaatgtgctccgcctcaagatctaaggttcgattccctccggtgccaatttggg 22363170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 23465996 - 23465927
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||| ||||||||||||  ||||||||| || ||  |||||||| ||||||||| ||| ||||||||||    
T  23465996 acccatttgggttggtctaatggtattggtttaggatttgggagtatgctcctcctcaaagtctcaggtt 23465927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 15399 - 15284
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||||| | |||||||||||| ||||||||| | ||||||||| ||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtggg 15300  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  15299 ctaatttagcttcttc 15284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 31623067 - 31622952
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||| |||||||||||||| || | ||||||||||||||||| | ||||||||||||||| || |||||||| |||||||||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtggg 31622968  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  31622967 ctaatttagcttcttc 31622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 33549104 - 33549218
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||||| | |||||||||||| ||||||||| | ||||||||| |||| |    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgag 33549203  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  33549204 ctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 14278187 - 14278086
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||| |||||||| |||||| |||||||||||| | |||||||| ||||||||  ||||||||||||||||||||||| |||| ||||||||||||    
T  14278187 taacccacatgggttggcctggtg-tattggctttggacctgggagtgcgctcctccttaaggtctcaggtttgattctctctggtgtcaatttgggtgg 14278089  T
Q  148 gct 150  Q
    |||    
T  14278088 gct 14278086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 30127399 - 30127492
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||||||||||||||||||||| ||   ||||||||||||||||  | |||||||||||| |||||| ||||||||||||||    
T  30127399 taacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaattt 30127492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 14557962 - 14558076
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||| ||||||| || | ||| ||||||||||||| |  ||||||||||| ||||||| |||||| ||||||||||||     
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc-ccggtgtcaatttgggtggt 14558060  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  14558061 ctaatttagcttcttc 14558076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 20863388 - 20863489
Alignment:
Q  62 tggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttct 161  Q
    |||| ||||||| ||||||| || ||| ||||||||||||||| ||||||||||| ||||||||||||   ||||||||||||||||||| || ||||||    
T  20863388 tggtgtggtggtgttggcttgggactttggagtgtgctcctcctcaaggtctcagatttgattctctctaatgccaatttgggtgggctagttggcttct 20863487  T
Q  162 tc 163  Q
    ||    
T  20863488 tc 20863489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 6385881 - 6385976
Alignment:
Q  68 ggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    |||||||||| ||| || | ||||| |||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  6385881 ggtggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 12188379 - 12188264
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| || | ||||||||||||||||| |||||| ||| ||| |||||||||  ||||||||||| | |||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgaggggg 12188280  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  12188279 ttagtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 21418470 - 21418585
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||| |||||||||||||||| || ||||||||||||||||||| | | |||||| ||| ||||||| |  |||||||||  ||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtggg 21418569  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  21418570 ctaatttagcttcttc 21418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 24334101 - 24333987
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| | | |||| ||||||| || | | | ||| ||||||||| ||||||||||||||  |||||| ||||||||||||||||||||    
T  24334101 aacccacttgggttggccggatggtgttggcttgggacattgcagtatgctcctcctcaaggtctcaggttcaattctcaccggtgccaatttgggtggg 24334002  T
Q  149 cta-tttagcttctt 162  Q
    ||| |||||||||||    
T  24334001 ctagtttagcttctt 24333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 6758497 - 6758383
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    ||||||||| ||||| |||||||||||||||| ||  ||||||||||||||| || | |||||||| | | ||||||||| |||| |||||| |||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggc 6758398  T
Q  150 -tatttagcttcttc 163  Q
      |||||||||||||    
T  6758397 aaatttagcttcttc 6758383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 6691621 - 6691535
Alignment:
Q  54 acttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||| |||||||| ||| |||| | | | ||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  6691621 acttgggttggcctggtggtgttgactttagaccttggagtgtgctcctct-caaggtctcaggttcgattctctccggtgccaattt 6691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 23241987 - 23242101
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||| | ||| ||| || | | ||||||| ||||||| ||||||| |||||  | ||||| ||||||||||||||||||||    
T  23241987 aacccacttgggttgg-ctggtgatgttgccttgggacctcggagtgtactcctcctcaaggtcacaggtccggttctccccggtgccaatttgggtggg 23242085  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  23242086 ctagtttagcttcttc 23242101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 12234583 - 12234469
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| |||||| |||||||||||| ||| || | ||||||||||||||  | | |||||||||||| |||||||||| ||| |||||| | ||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatggg 12234484  T
Q  149 ct-atttagcttctt 162  Q
     | ||||||||||||    
T  12234483 ataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 13330087 - 13330201
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||  || ||||||||| |||||  |||||||||  |||||||| ||||||||||| || |||||||||  ||||||||||| | |||    
T  13330087 aacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaatttgagaggg 13330186  T
Q  149 cta-tttagcttctt 162  Q
     || |||||||||||    
T  13330187 ttagtttagcttctt 13330201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 1056762 - 1056646
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  || ||||||||||| | || ||||||||| ||||| ||| |||||| | | ||| ||||||||| |||||||| || |||||    
T  1056762 taacccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaagttaggtgg 1056663  T
Q  148 gct-atttagcttcttc 163  Q
    | | |||||||||||||    
T  1056662 gttaatttagcttcttc 1056646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 10338246 - 10338174
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattc 125  Q
    ||||||||||||  ||||||||||||||| || | | ||||||||||||||| |||||||||||||| |||||    
T  10338246 cacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 11306227 - 11306135
Alignment:
Q  72 gtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||| | ||||||| ||||| ||  |||||||||||||| ||||||||| |||||||||||| | ||| || ||||||||||||    
T  11306227 gtattggctttgggcctgggagtatgctcatcttcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 11306135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 20213080 - 20213156
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||| ||| |||||||||| ||||| |||  ||| ||||||||||||||| |||||||||||||    
T  20213080 tgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 22107103 - 22107179
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||| ||| |||||||||| ||||| |||  ||| ||||||||||||||| |||||||||||||    
T  22107103 tgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 22107179  T

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Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 34444809 - 34444917
Alignment:
Q  55 cttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-att 153  Q
    |||||||||| |||||||||||| ||| || | |  |||||||||||||| |||||||||||||| ||||||| | || || | |||| ||||||| |||    
T  34444809 cttgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctccctggagctagtttgagtgggctaatt 34444908  T
Q  154 tagcttctt 162  Q
    |||||||||    
T  34444909 tagcttctt 34444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 6776679 - 6776589
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||||||||| |||||||||||||||| ||   |||| |||||||||||| | | |||||| ||||||||||||| |||  ||||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctggtttcaatttgg 6776589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 8597774 - 8597708
Alignment:
Q  98 ctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||| |||||||||| |||  ||||||||| ||||||||||||||||||| |||||||||||||    
T  8597774 ctcctcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttcttc 8597708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 11423565 - 11423659
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||| |||||| |||||||||||||||| ||| ||  |||||||| |||| |||| | |||||||||||| |||| ||||| ||| |||||||    
T  11423565 taacccgcttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctccagtgtcaatttg 11423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 14200023 - 14199909
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| |||||||| ||| | ||||| |||||  | ||||||||||||||||||| ||||||||||| || |||||  ||  ||| ||||||||||||     
T  14200023 aacccatttgggttgctctagaggtataggcttgagacttgggagtgtgctcctcctcaaggtctcagattcgattccttctagtgtcaatttgggtgga 14199924  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  14199923 ctaatttagcttctt 14199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 10650071 - 10650027
Alignment:
Q  93 gtgtgctcctccgcaaggtctcaggtttgattctctccggtgcca 137  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  10650071 gtgtgctcctcttcaaggtctcaggtttgattctctccggtgcca 10650027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 13661515 - 13661594
Alignment:
Q  43 taaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgat 123  Q
    |||| |||||||| ||||||||||| ||| |||||||||    ||||||||||||||||||| | ||||||||||||||||    
T  13661515 taaattaacccacatgggttggtctagtg-tattggcttgacacttgggagtgtgctcctcctcgaggtctcaggtttgat 13661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 19638080 - 19638001
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    |||||||||| |||||||  ||||||||||| | |  | ||||||||||||||  | |||||||||||||||||||||||    
T  19638080 aacccacttgcgttggtccagtggtattggcgtggaacctgggagtgtgctccagctcaaggtctcaggtttgattctct 19638001  T

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Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 28841455 - 28841506
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||| ||||||    
T  28841455 ggagtgtgctcctcctcaaggtctcaagttcgattctctccggtgtcaattt 28841506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 32613214 - 32613124
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||| |||||||||||| ||| ||   ||||||||||||||| | |||| ||||| ||| |||||||| | ||| ||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctcttcagtgtcaattt 32613124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 23910148 - 23910074
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||||||| |||||||||||||| || |||||  |||||||||||| | ||| || ||||||||||||    
T  23910148 tgggagtgtgctcctcctcaaggtctcaggttcgaatctct--ggtgccaatttgagggggttagtttagcttcttc 23910074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 13441053 - 13441101
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctc 100  Q
    ||||||||||||||| |||||||||||||| || | |||||||||||||    
T  13441053 ccacttgggttggtcgggtggtattggcttgggacctgggagtgtgctc 13441101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 15951340 - 15951264
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    |||||||||||||||||| |||||||||| |||  |||||||| ||| |||||||| | ||| || |||||||||||    
T  15951340 ttgggagtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagagggttagtttagcttctt 15951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 22995109 - 22995009
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||||||| |||||||||||||||||| |||    |||| ||||||| | |||| ||| ||||| |||| |||| ||||| || |||||| |||||||||    
T  22995109 cccacttgagttggtctggtggtattgacttgaaacttgtgagtgtgtttctcctcaaagtctctggttcgattttctccagtaccaattcgggtgggct 22995010  T
Q  151 a 151  Q
    |    
T  22995009 a 22995009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 23793291 - 23793391
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||||||| |||||||||||||||||| |||    |||| ||||||| | |||| ||| ||||| |||| |||| ||||| || |||||| |||||||||    
T  23793291 cccacttgagttggtctggtggtattgacttgaaacttgtgagtgtgtttctcctcaaagtctctggttcgattttctccagtaccaattcgggtgggct 23793390  T
Q  151 a 151  Q
    |    
T  23793391 a 23793391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 28363979 - 28364039
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||||| ||||||||||| || |||| |||| |||| |||||||| |||||||    
T  28363979 gagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggcta 28364039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 3779339 - 3779406
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcag 116  Q
    ||||||||| |||||  || |||||||||||||  | ||||||||||||||||| | |||||||||||    
T  3779339 aacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcag 3779406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 11448922 - 11448965
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  11448922 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 11448965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 24641266 - 24641151
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| |||||||||  ||||||||||| ||| ||   ||||||||||||||||| | |||| | ||||| |||||||  |  ||||||||| ||||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtggg 24641167  T
Q  149 ct-atttagcttcttc 163  Q
    || ||||| |||||||    
T  24641166 ctaatttaacttcttc 24641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 12216753 - 12216823
Alignment:
Q  58 gggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    ||||||||||||||||||||| || || | || || ||||||||| | | |||||||||||| ||||||||    
T  12216753 gggttggtctggtggtattggtttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 2484758 - 2484835
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||| ||||| |  || |||| ||||| |||||||||||||| ||||||| ||||||| ||||| |||||||    
T  2484758 ttgggagtgtactccttcttaaagtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttcttc 2484835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 2616476 - 2616557
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctcc 130  Q
    |||||| ||||||||| || |||||||| ||||  ||| ||| ||||||||||||  |||||||||| ||| | ||||||||    
T  2616476 aacccatttgggttggcctagtggtattagcttgagtcatggaagtgtgctcctcttcaaggtctcaagttcgtttctctcc 2616557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 11103488 - 11103419
Alignment:
Q  72 gtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||| |||| || ||||| |||||||||||||  |||||||| | || ||||||||| |||||||||||    
T  11103488 gtattcgcttgggacttggtagtgtgctcctccttaaggtctccgattcgattctctctggtgccaattt 11103419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 12633007 - 12633124
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    |||||||||||||||||  | |||| ||||| ||| ||  |||||||||||||||||  | || ||||| ||| ||||||||||  || ||||||  |||    
T  12633007 ctaacccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaatttaagtg 12633106  T
Q  147 ggct-atttagcttcttc 163  Q
    | || |||||||||||||    
T  12633107 gactaatttagcttcttc 12633124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 15360261 - 15360201
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  15360261 ggagtttgctcctcca-aaggtctcaggttcgattccctctggtgccaatttcggtgggcta 15360201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 18562676 - 18562599
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||||   || | ||||||||||||||| |  || ||||||| |||||||| |||||||||||||    
T  18562676 ttgggagtgtgctcctccttgagatttcaggtttgattctcccaagtaccaatttaggtgggctaatttagcttcttc 18562599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 8278352 - 8278236
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||| | || ||||| |||||||| ||||||||||| |||| |||||    
T  8278352 taacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgg 8278253  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  8278252 gctaatttagcttcttc 8278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 16773807 - 16773922
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||| |||||||||||||||||| ||| || | ||||||||||||||||| | |||||||||||| ||||||||| | ||||||||| ||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtggg 16773906  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  16773907 ctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 14495882 - 14495766
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| |||||||||||||||||||||| ||| ||   ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||| | |||    
T  14495882 taacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgg 14495783  T
Q  148 gcta-tttagcttcttc 163  Q
    |||| ||||||||||||    
T  14495782 gctagtttagcttcttc 14495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 29692462 - 29692347
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||||||||||||||||| || ||   ||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||     
T  29692462 aacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctccgatgccaatttgggtgga 29692363  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||| ||||||    
T  29692362 ctaatttagtttcttc 29692347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 25627056 - 25627150
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||||||||| |  ||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||    
T  25627056 taacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttg 25627150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 30883274 - 30883172
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| ||||||||||||| || | ||||||||||||||||| |||||||||| |||  |||||| || ||| |||||||||||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggtggg 30883175  T
Q  149 cta 151  Q
    |||    
T  30883174 cta 30883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 34984806 - 34984899
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||||| ||||||||||||| |  | ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttg 34984899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 17028341 - 17028225
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  || || ||||||| || || ||||||||||||||||||| |||||||||||||||||||| |||  ||| |||||| |||||    
T  17028341 taacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgg 17028242  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  17028241 gctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 16457810 - 16457925
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| |||||| |||||||||||||||| || | | ||||||||||||||| |||||||||| |||  |||||| |||||||||||||| |||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttgcgtggg 16457909  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||| ||||||    
T  16457910 ctagtttaggttcttc 16457925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 21589288 - 21589403
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| || | ||||||| |||| |||| | | |||||||||| ||||| ||| ||||||||||| ||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtggg 21589387  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  21589388 ctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 22737082 - 22737197
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||| ||| |||||||||| ||||| ||| | |  |||||| ||||||    
T  22737082 aacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgattccctctgatatcaatttaggtggg 22737181  T
Q  149 ct-atttagcttcttc 163  Q
     | |||||||||||||    
T  22737182 ttaatttagcttcttc 22737197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 14285161 - 14285254
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| |  |||| |||||||| |  | ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg 14285254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 29075780 - 29075896
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||| | || ||||||||||||| ||   ||||||||||||||||| | || ||||| ||| ||||||||| ||||||||||| | |||    
T  29075780 taacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgg 29075879  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  29075880 gctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 30109384 - 30109270
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  |||||||||||||||  | | |||||||||||||||||   |||||||||||| ||||| | ||||||| ||||| ||||||    
T  30109384 aacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc-ccccggtgctaatttaggtggg 30109286  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  30109285 ctaatttagcttcttc 30109270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 7918546 - 7918452
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||||||||| |  | ||||||||  ||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  7918546 taacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaatttg 7918452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 26078127 - 26078034
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| || |||||||||| || || ||||||||| |||| |||  |||||||||||||| |||||||||  |||||||||||    
T  26078127 aacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaatttg 26078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 84863 - 84939
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||| |||||||||| ||| ||||||| ||||||||| | |||||||||| |||||||||||||    
T  84863 tgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatttagcttcttc 84939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 87499 - 87388
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| |||||| || ||||||||| ||| |    ||||||||||||||||| |||||||||||||||||||| |||| ||| ||||||| |||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaatttgagtggg 87401  T
Q  149 ct-atttagcttc 160  Q
    || ||||||||||    
T  87400 ctaatttagcttc 87388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 21549213 - 21549120
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| || ||||||||||||| || | |||||||||||||||||  || |||||| ||| |||| ||||  |||||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaatttg 21549120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 12877696 - 12877808
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    ||||||| |||||||| |||| ||||| || ||  ||||||||||| | |||| ||| |||||||||| ||||||||| ||| | ||||| ||||||||     
T  12877696 ccacttgagttggtctagtggcattggtttgggatttgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggcta 12877795  T
Q  151 atttagcttcttc 163  Q
    |||||||||||||    
T  12877796 atttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 43442235 - 43442311
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||| |||||||||||||| ||||||||| | || |||||||| |||||| |||||| ||||||    
T  43442235 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtttcttc 43442311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 18596075 - 18595984
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||| ||| ||| |||||||||||||  | | ||||| ||||||||||| |||||||| ||||| |||| |||| ||||||||||||    
T  18596075 cccacttggattgatctagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaatttg 18595984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 35705043 - 35705101
Alignment:
Q  106 caaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||||    
T  35705043 caaggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagcttcttc 35705101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 17155868 - 17155937
Alignment:
Q  95 gtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||| |||||||||||||||||||||||  | |||||||||| ||||||| ||||| |||||||    
T  17155868 gtgctcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaatttaacttcttc 17155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 31669102 - 31669014
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgcc 136  Q
    |||||||||||||||||||||| |||| ||||||| || | | ||||| ||||||| | |||||||| ||||| ||||||| ||||||||    
T  31669102 ctaacccacttgggttggtctgatggtgttggcttgggaccttggagtctgctcct-ctcaaggtcttaggttcgattctccccggtgcc 31669014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 1410728 - 1410622
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attt 154  Q
    |||||||||||||||||||||| ||| ||   ||||||||||||||||| | |||||||| ||| ||||||||  |||| ||| |||||| |||| ||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctca-gttcgattctctgtggtgtcaa-ttgggtaggctaattt 1410631  T
Q  155 agcttcttc 163  Q
    |||||||||    
T  1410630 agcttcttc 1410622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 3252366 - 3252250
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| || ||||||||| |||  | ||||||||||  ||| ||| || | ||||||||| ||||||||| | |||||||| || |||    
T  3252366 taacccacttgggttggcctagtggtattgacttgagacttgggagtgcactcttcctcaggctctcaggttcgattctctctgatgccaattcggatgg 3252267  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||| ||||||    
T  3252266 gctaatttagtttcttc 3252250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 6844728 - 6844844
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| | |||||||||| ||| |   ||||||||||| |||||| | |||||| ||||| |||| ||||  |||||||||| |||||    
T  6844728 taacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaatttaggtgg 6844827  T
Q  148 gcta-tttagcttcttc 163  Q
      || ||||||||||||    
T  6844828 attagtttagcttcttc 6844844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 16436622 - 16436692
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgatt 124  Q
    |||||||||||| || ||||||||||||| || ||||| ||||||||||||| |||||||||| ||| ||||    
T  16436622 cacttgggttggcctagtggtattggcttgggacttgg-agtgtgctcctcctcaaggtctcatgttcgatt 16436692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 40461689 - 40461619
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||||| ||||||||||||  |||  | |||| ||||||||| |||| ||||||||||||||    
T  40461689 aacccacttgggttgatctggtggtattaacttgagacttgagagtgtgcttctcctcaaggtctcaggtt 40461619  T

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Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 29173531 - 29173604
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    ||||||||||||||| | |||| ||||||| |||| |||| |||| |||||| |||||||| ||||||||||||    
T  29173531 ggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 37258401 - 37258328
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    ||||||||||||||| |||||| ||||||| ||||||||| |||| ||||||| | ||| || |||||||||||    
T  37258401 ggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

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Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 5390926 - 5390853
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgatt 124  Q
    |||||| ||||||||| || ||||||||||||| || |||||||  |||||||||| | |||||||||||| ||||    
T  5390926 aacccatttgggttggcctagtggtattggcttggggcttggga--gtgctcctcctcgaggtctcaggttcgatt 5390853  T

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Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 35360120 - 35360048
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    ||||||||| |||| | |||||||||||| ||||||| ||||||||||||| |||| || | |||||||||||    
T  35360120 gagtgtgcttctcctcgaggtctcaggttcgattctcaccggtgccaatttaggtgagcgagtttagcttctt 35360048  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 892551 - 892480
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||| ||||||||| || ||||||||||||| || | |  |||||| ||||||| ||||||||||||||    
T  892551 taacccatttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggtt 892480  T

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Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 3315256 - 3315307
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||| |||||||| |||||||||||||| ||||||| | |||||||||||    
T  3315256 ggagtgcgctcctcctcaaggtctcaggttcgattctcccaggtgccaattt 3315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 8484807 - 8484764
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||    
T  8484807 aggtctcaggtttgattccctctggtgccaatttcggtgggcta 8484764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 18207258 - 18207301
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||    
T  18207258 aggtctcaggttcgattccctccggtgccaatttcggtgggcta 18207301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 31074273 - 31074324
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||| |||||| |||| ||||||||| ||||||||| |||||||||||    
T  31074273 ggagtgtgttcctcctcaagatctcaggttcgattctctctggtgccaattt 31074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 32670704 - 32670590
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||| |||||||| |||||||||||||||| ||  || |||||||| |  ||  ||| |||||| ||||||||||| |  ||| |||||||| |||    
T  32670704 taacccacctgggttggcctggtggtattggcttaggattttggagtgtgtttatcgtcaatgtctcatgtttgattctc-catgtgtcaatttggatgg 32670606  T
Q  148 gct-atttagcttctt 162  Q
    ||| ||||||||||||    
T  32670605 gctaatttagcttctt 32670590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 1279034 - 1279104
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttct 161  Q
    ||||||||||||  | |||||||| ||| ||||||||| |||| |||||||||||| || |||||||||||    
T  1279034 agtgtgctcctcatcgaggtctcaagttagattctctctggtgtcaatttgggtggactaatttagcttct 1279104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 18974005 - 18974059
Alignment:
Q  94 tgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||| |||||| ||||||| ||||||| | |||||||||||| |||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtggg 18974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 19043457 - 19043551
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||| ||||| ||| |  |||||||||||| |||| | ||| ||||||||||  || |||||  |||||||||||    
T  19043457 taacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttcaatcctctctagtgccaatttg 19043551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 25979208 - 25979250
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||||| ||||||| |||||||||||||| |||||||||    
T  25979208 ttgggagtgttctcctcctcaaggtctcaggttcgattctctc 25979250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 35796686 - 35796580
Alignment:
Q  58 gggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttag 156  Q
    ||||||| || |||||||||| ||||| ||| ||||||||||||||| || | | ||||||| ||||| |||  ||| |||||| ||| |||| ||||||    
T  35796686 gggttggcctagtggtattggttttggacttaggagtgtgctcctcctcatgatttcaggttcgattccctcttgtgtcaatttaggtaggctaatttag 35796587  T
Q  157 cttcttc 163  Q
    | |||||    
T  35796586 catcttc 35796580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 18437088 - 18437177
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||| |||||| || ||||||||  ||| || |||| |||||||||||||| ||| || || |||| |||||||||  ||||||||||    
T  18437088 ccacttaggttggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaattt 18437177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 28285294 - 28285367
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||| ||||||||| |||||| || |||| |||||| ||  ||| ||||||||||||||| |||||||||||||    
T  28285294 gagtttgctcctcctcaaggtatcgggttcgattctttctagtgtcaatttgggtgggctaatttagcttcttc 28285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 36958207 - 36958118
Alignment:
Q  40 acataaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||  ||||||||||||||| | |||||| ||||||||  |  ||||||||||| |||||  | | |||||||||| |||||||||    
T  36958207 acataaaaaaacccacttgggttgatatggtgggattggcttgagatttgggagtgtgttcctcatcgaagtctcaggttcgattctctc 36958118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 19238654 - 19238542
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||||||||||| | ||||||| |||| ||||||| ||||| |||||||||||||    
T  19238654 taacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgg 19238555  T
Q  148 gct-atttagctt 159  Q
    ||| |||||||||    
T  19238554 gctaatttagctt 19238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 46295096 - 46295211
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| |||||||||||| || ||||||| || | | ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  46295096 taacccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgg 46295195  T
Q  148 gcta-tttagcttctt 162  Q
    |||| |||||||||||    
T  46295196 gctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 49576963 - 49576872
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||  || ||||||||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtgg 49576872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 37109428 - 37109334
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||||||||| || | ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  37109428 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg 37109334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 51250598 - 51250484
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| ||   |||||||||||||| || |||| ||||| ||| ||||| ||||||||||||||||||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtggg 51250499  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  51250498 ctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 55427276 - 55427165
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| || | ||||||| ||||||| | | |||||||||||| |||||||  |||||||||||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtggg 55427177  T
Q  149 ct-atttagctt 159  Q
    || |||||||||    
T  55427176 ctaatttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 5795487 - 5795369
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggt- 145  Q
    ||||||||||||||||||||||||||| ||| ||| |  | | ||||| ||||||||| |||||||||||||||||||||| || ||||||||||||||     
T  5795487 ctaacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaatttgggtg 5795388  T
Q  146 gggcta-tttagcttcttc 163  Q
    |||||| ||||||||||||    
T  5795387 gggctagtttagcttcttc 5795369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 7949530 - 7949415
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||| ||| || | ||||||||||| || | | ||||||||||||||| |||||||||||||| ||||||||| |||| |||||| ||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtggg 7949431  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  7949430 ctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 31759735 - 31759641
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||| ||||||||||| || |||||| || ||| ||||||||    
T  31759735 taacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctggtaccaatttg 31759641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 51954132 - 51954229
Alignment:
Q  67 tggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||| |||| ||| || ||||||||| ||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  51954132 tggtggcattgacttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttc 51954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 7292871 - 7292759
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||||||| ||||||||||||| |  | ||||||||||||||||| ||| |||||||||| |||||||||  ||||||||||| | ||| ||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggtta 7292772  T
Q  152 -tttagcttcttc 163  Q
     ||||||||||||    
T  7292771 gtttagcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 28635695 - 28635811
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  ||||||||| || ||| ||   |||||||||||||||||   |||||| ||||| ||||||||| |||||||||||||||||    
T  28635695 taacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgg 28635794  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  28635795 gctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 4249177 - 4249292
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| | |||| || ||||||| ||||| ||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||| | |||    
T  4249177 aacccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgaggggg 4249276  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  4249277 ttagtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 8030280 - 8030165
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||| |||  || ||||||| ||||| || ||||||||||||||||||| |||||||||| ||| ||||| |||  ||| |||||||||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtggg 8030181  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  8030180 ctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 37274537 - 37274420
Alignment:
Q  48 taacccacttgggttggtctggtggta-ttggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||| || || ||| ||||||| || | ||||||||||||||||| |||||||| ||||| ||||||||| ||||| |||||  |||    
T  37274537 taacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtg 37274438  T
Q  147 ggct-atttagcttcttc 163  Q
    |||| |||||||||||||    
T  37274437 ggctaatttagcttcttc 37274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 8325456 - 8325344
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| | |||||| |||||||  | | | ||||||||||| ||| |||||||| ||||| ||||||| |||||| ||||||||||||    
T  8325456 taacccacttgggttgggccggtggtgttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggtgg 8325357  T
Q  148 gcta-tttagctt 159  Q
    |||| ||||||||    
T  8325356 gctagtttagctt 8325344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 19680864 - 19680772
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||| |||| || |||||||| |||| || ||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||||    
T  19680864 aacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaattt 19680772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 23377980 - 23378071
Alignment:
Q  73 tattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||| || | ||||||||||||||||| |||||||||||||| |||||||||  ||||||||||| | |||||| ||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 37720290 - 37720175
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||| ||||||||| || | ||||||||||| ||||| ||||||| |||||| ||||||| | ||   |||||| ||||||    
T  37720290 aacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctcccagggatcaatttaggtggg 37720191  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  37720190 ctaatttagcttcttc 37720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 2732043 - 2732109
Alignment:
Q  98 ctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  2732043 ctcctcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 40284060 - 40283947
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    ||||||||||||||  || |||||||||||| || |||||||||||||  |||| |||||||| ||||||||||||    ||||||||||| ||||||||    
T  40284060 cccacttgggttggcatgatggtattggcttgggacttgggagtgtgcatctcctcaaggtctaaggtttgattctgcttggtgccaatttaggtgggct 40283961  T
Q  151 -atttagcttcttc 163  Q
     ||||| |||||||    
T  40283960 aatttaacttcttc 40283947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 51622526 - 51622599
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg-ctatttagcttctt 162  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||| | ||||||||||||    
T  51622526 ggagtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 19229284 - 19229173
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||| |||||||||||||| | || ||| | | ||||||||||| | |||||||||||| ||||||| | ||| |||||||||||||    
T  19229284 taacccatttgggttggcctggtggtattggcctgggacttagaa-tgtgctcctcctcgaggtctcaggttcgattctccctggtaccaatttgggtgg 19229186  T
Q  148 gc-tatttagctt 159  Q
    || ||||||||||    
T  19229185 gcttatttagctt 19229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 38869788 - 38869883
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||| ||   ||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| | ||| || ||||||||||||    
T  38869788 gtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 39509070 - 39509169
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||||  ||||| |||||| ||   ||||||||||||||||| | |||||||||||| ||||||| || ||| |||||| ||||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtggg 39509169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 15180740 - 15180853
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| | ||||||| ||||||||||||| || | ||||||||| |||||   |||||||| ||||| ||||||||| |||||||||||| | ||    
T  15180740 taacccacttagattggtctagtggtattggcttgggacctgggagtgtactcct---caaggtcttaggttcgattctctctggtgccaatttgagggg 15180836  T
Q  148 gcta-tttagcttcttc 163  Q
    | || ||||||||||||    
T  15180837 gttagtttagcttcttc 15180853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 31826602 - 31826711
Alignment:
Q  42 ataaactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||| ||||||||||||||||  || ||||||| ||||| ||  ||| |||||||||||||| |||||||||| ||| ||||| ||   ||| ||||||    
T  31826602 ataaaataacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaattt 31826701  T
Q  142 gggtgggcta 151  Q
    ||||||||||    
T  31826702 gggtgggcta 31826711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 2185109 - 2184994
Alignment:
Q  49 aacccactt-gggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||| ||||||| || |||||| |||||| |  | ||||||||||||||| | ||| |||||||||| ||||||||||| |||||||||| | ||    
T  2185109 aacccacttcgggttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggg 2185010  T
Q  148 gcta-tttagcttctt 162  Q
    | || |||||||||||    
T  2185009 gttagtttagcttctt 2184994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 2622475 - 2622379
Alignment:
Q  49 aacccacttgggttggtctggtggtatt----ggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||| || ||||||||    ||||| || | ||||||||||||||||| | | |||||||||| ||||||||| |||||||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattt 2622379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 13015447 - 13015526
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||| || ||||||||||||||||||| | | |||||| ||| ||||||||| |||| |||||| ||||||    
T  13015447 gtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtggg 13015526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 20281265 - 20281170
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||| |||||||||| ||| ||  ||| ||| |||||||||| ||||||| |||||| ||| ||| ||||||||| |||| ||||    
T  20281265 ccacttgggttggtccggtggtattgacttgggaattgagagcgtgctcctcctcaaggtcccaggttcgatcctccccggtgccagtttgagtgg 20281170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 29195095 - 29195209
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| ||||||| || | | ||||||||||||| | ||||||| || ||| |||||||||   ||||||||| ||| ||    
T  29195095 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtcgcaagttcgattctctctaatgccaattttggttgg 29195193  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  29195194 ctagtttagcttcttc 29195209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 44865333 - 44865432
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| ||| |||| |||||||  ||| | |  |||||||||||| |||||||| ||||| ||||||| || |||||||||| |||||    
T  44865333 taacccacttgggttggcctgatggtgttggcttgagtccttgatgtgtgctcctcctcaaggtcttaggttcgattctcccctgtgccaatttcggtgg 44865432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 32992653 - 32992727
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||||| |||||||||| ||| ||||||| |||||| ||||||| |||| ||| ||||||||||||    
T  32992653 ggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagcttcttc 32992727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 8034843 - 8034896
Alignment:
Q  110 gtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||    
T  8034843 gtctcaggttcaattctttccggtgccaatttgagtgggctatttagcttcttc 8034896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 46329203 - 46329260
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggt 145  Q
    ||||||||||||||||| |||||| ||||||| ||||||  |||||||||||||||||    
T  46329203 tgggagtgtgctcctcctcaaggtatcaggttcgattcttcccggtgccaatttgggt 46329260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 9937038 - 9936938
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||| ||||||||||| || ||||||| | |||  | ||||||||||||||||||| | | || ||||||| ||||||| ||| || ||||||||||||    
T  9937038 taacctacttgggttggcctagtggtatcgacttgagacttgggagtgtgctcctcctcgaagtttcaggttcgattctcaccgttgtcaatttgggtgg 9936939  T
Q  148 g 148  Q
    |    
T  9936938 g 9936938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 24234649 - 24234725
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||||||  | |||||||||||||| || ||||||||||||||| |||  ||||||||| ||| |||||||||    
T  24234649 cacttgggttgtccaggtggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctc 24234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 52254477 - 52254365
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||| ||||||||| |||||||| ||| ||   || ||||||||||||||   |||| ||||||| |||||||||| |||||||| | || ||||||    
T  52254477 ccacttgagttggtctgatggtattgacttgggatatgagagtgtgctcctccttgaggtttcaggttagattctctccagtgccaatgtaggcgggcta 52254378  T
Q  152 -tttagcttcttc 163  Q
     ||||||||||||    
T  52254377 gtttagcttcttc 52254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 53496899 - 53496971
Alignment:
Q  71 ggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||||| || || | ||||||||||||||||| ||| ||||||| |||||||||||| || ||||||||||    
T  53496899 ggtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctggagccaatttgg 53496971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 16581713 - 16581808
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||| |  | ||||||| ||||||||| ||||||||||||||  ||| |||| |||||||||||| | ||| || ||||||||||||    
T  16581713 gtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggttagtttagcttcttc 16581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 17618281 - 17618396
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||  ||  |||||||||||||||  | | ||||||||||||||||| | |||||||| ||| | ||| ||||||  ||||||| ||| ||    
T  17618281 aacccacttgggccggcttggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcgtttccctccggcaccaatttaggttgg 17618380  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  17618381 ctagtttagcttcttc 17618396  T

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Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 25414290 - 25414192
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| ||||||||||| ||  |||| |||||||  | | | ||||||||||||||  ||| |||||||||||||||||| ||||||||||||| ||||||    
T  25414290 aaccaacttgggttggccttctggtgttggcttgagaccttggagtgtgctcctct-caaagtctcaggtttgattctccccggtgccaattttggtggg 25414192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 55256275 - 55256173
Alignment:
Q  49 aacccacttgggttggtc-tggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||| | |||||||||||||||  | | | |||||||||| | || ||||| |||||||| |||||||  |||||||||||| |||||    
T  55256275 aacccacttgggttgggcctggtggtattggcttgtgacattggagtgtgcttc-cctcaaggcctcaggttcgattctcctcggtgccaattttggtgg 55256177  T
Q  148 gcta 151  Q
    ||||    
T  55256176 gcta 55256173  T

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Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 56440442 - 56440517
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctcc-ggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||||  |||||||| |||| ||||||| || || ||||||||||||||||| |||||||||||||    
T  56440442 ggagtgtgctcctccttaaggtctccggttcgattctccccgggggccaatttgggtgggctaatttagcttcttc 56440517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 1730566 - 1730472
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||  || ||||||||||||| || | || |||||||||||||  ||| ||||||| ||  |||||||| ||||| ||||||    
T  1730566 taacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctggtgctaatttg 1730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 4911304 - 4911218
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaat 139  Q
    |||||||||||||||||||||||| |||| || ||| ||||||||||||| | ||| || |||  || |||||||| | ||||||||    
T  4911304 cacttgggttggtctggtggtattagcttgggacttaggagtgtgctcctactcaacgtttcatattcgattctcttcagtgccaat 4911218  T

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Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 24827825 - 24827895
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||| |||||||| |||||||||| ||| || | |||||||| |||||||| | ||||||||||||    
T  24827825 aacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctcaggtt 24827895  T

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Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 30938254 - 30938180
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||||| | |||||||||||| ||||||| ||  ||||||||| |||||| || ||||||||||||    
T  30938254 ggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 30938180  T

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Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 38838838 - 38838912
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||| || |||||| |||||||| |||||| ||||||    
T  38838838 ggagtatgctcctcctcaaggtcttaggttcgattctctccgatggcaatttcggtgggctaatttagtttcttc 38838912  T

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Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 49262762 - 49262645
Alignment:
Q  49 aacccacttgggttggtctggtg--gtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    |||| |||||||||||| |||||  ||||| |||| || |||| ||||||||||||     |||||||||||| ||||||| || |||||||||| ||||    
T  49262762 aaccaacttgggttggtatggtgtggtattcgcttgggacttgagagtgtgctccttgttgaggtctcaggttcgattctccccagtgccaatttaggtg 49262663  T
Q  147 ggct-atttagcttcttc 163  Q
    |||| |||||| ||||||    
T  49262662 ggctaatttagtttcttc 49262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 33619205 - 33619298
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||||||   ||||||||||||||| ||   |||||| ||| ||||||   |||||| ||||| |||||||| ||||||||||||    
T  33619205 taacccacttgggttgccttggtggtattggcttaggatctgggagcgtggtcctccttgaggtcttaggttcgattctcttcggtgccaattt 33619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 46545710 - 46545791
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    ||||||||||||||||| || |||||||||||||  | | || |||||||||||||| |||| |||||| || |||| ||||    
T  46545710 taacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctc 46545791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 56409951 - 56410039
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaa 138  Q
    |||||||||||| ||| |||||| | ||||||| || | | ||||||||||||| | |||||||||||||| ||||||| | ||||||||    
T  56409951 aacccacttgggctggcctggtgctgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattctccctggtgccaa 56410039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 9693527 - 9693459
Alignment:
Q  96 tgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||| |||||||||||||| ||||| |||  ||| ||||||||||||||| ||||| |||||||    
T  9693527 tgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttc 9693459  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 12793980 - 12793872
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attt 154  Q
    |||||||||||| ||| ||||||||| ||   || |||||||||| ||| | | || | | ||| ||||||||| ||||||||||| |||||||| ||||    
T  12793980 ttgggttggtctagtgatattggcttcggatctgtgagtgtgctcttccacgaagtattaagttcgattctctctggtgccaatttaggtgggctaattt 12793881  T
Q  155 agcttcttc 163  Q
    |||||||||    
T  12793880 agcttcttc 12793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 37980219 - 37980132
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||| |||||| | ||||||| || | | ||||||||||||| | |||||||||||||| ||||||| || ||| ||||||    
T  37980219 cacttgggttggcctggtgatgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattctccccagtgtcaattt 37980132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 42281309 - 42281218
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||||| | |||||| ||||||| || | | | ||||||||||| | |||||||||||||||||| | | |||||||| ||||    
T  42281309 aacccacttgggttggccaggtggtgttggcttgggaccttgtagtgtgctcct-ctcaaggtctcaggtttgatcccccccggtgcctattt 42281218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 49225506 - 49225414
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||||||||||||||| |||||||  | | || |||||||||| ||| | | |||||  ||| |||||| | ||||||||||||    
T  49225506 aacccacttgggttggtctggtggtgttggcttaaggcctgagagtgtgctcttcctcgatgtctcgtgttcgattcttttcggtgccaattt 49225414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 51969055 - 51969111
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||||||||||||||| |||||| |||||||   ||||||| |||||||||||||    
T  51969055 ttgggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttgg 51969111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 9241102 - 9241031
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||||||| |||||||||||||||| ||   ||| ||||||||||| | | |||||| |||||    
T  9241102 taacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggtt 9241031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 34844904 - 34844861
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  34844904 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 34844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 38206201 - 38206127
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgatt 124  Q
    |||||||||||||||  ||||||||  |||||| || | | ||||||||||||| | |||||||||||||||||||    
T  38206201 aacccacttgggttgacctggtggtgctggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtttgatt 38206127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 40058998 - 40058955
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  40058998 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 40058955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 47044716 - 47044795
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||||||||| |||| |||||||||||| ||| ||   || |||| ||||||||| | |||||||||||| |||||||    
T  47044716 taacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 49287909 - 49287952
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  49287909 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 49287952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 4185093 - 4185195
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| ||||| |||||||||||||| || || |||  ||||||| |||||| | |||||||| | | ||||||| |  ||| |||||| ||||||    
T  4185093 aacccactttggttgatctggtggtattggtttgggacttaagagtgtgatcctcctcgaggtctcaagatcgattctccctagtgtcaatttaggtggg 4185192  T
Q  149 cta 151  Q
    |||    
T  4185193 cta 4185195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 5609347 - 5609305
Alignment:
Q  109 ggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||    
T  5609347 ggtctcaggttcgattctctctggtgccaatttcggtgggcta 5609305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 21344817 - 21344918
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||| || | ||||||| || | | ||||||||||||| | |||||||||| |||  |||||| || ||| |||||| ||||||    
T  21344817 aacccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcct-ctcaaggtctcatgttcaattctccccagtgtcaatttaggtggg 21344915  T
Q  149 cta 151  Q
    |||    
T  21344916 cta 21344918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 21660220 - 21660106
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| |||||||||||||||||||||||| |||  |   ||||||||||||| ||| | |||||||| ||| |||| ||||  ||| |||||| ||| |     
T  21660220 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtaga 21660121  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  21660120 ctaatttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 21668984 - 21668870
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| |||||||||||||||||||||||| |||  |   ||||||||||||| ||| | |||||||| ||| |||| ||||  ||| |||||| ||| |     
T  21668984 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtaga 21668885  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  21668884 ctaatttagcttctt 21668870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 23284275 - 23284221
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttctt 162  Q
    ||||||||||||||||||||||| |||  |||||||||| | |||||| ||||||    
T  23284275 aggtctcaggtttgattctctccagtgttaatttgggtgagttatttaacttctt 23284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 19532057 - 19531976
Alignment:
Q  70 tggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| || | | |||| ||||||||||  ||| | ||||||| ||||||||| | ||||||||| |||||||||    
T  19532057 tggtattggcttgggacataggagcgtgctcctccttaagttttcaggttcgattctctctgatgccaatttaggtgggcta 19531976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 25852248 - 25852308
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  25852248 ggagtttgctcctcca-aaggtctcaggttcgattccctctggtgccaatttcggtgggcta 25852308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 27105066 - 27104989
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||| ||||| |  || |||| ||||| |||||||||||||| ||||||| ||||||| ||||| |||||||    
T  27105066 ttgggagtgtactccttcttaaagtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttcttc 27104989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 43728402 - 43728505
Alignment:
Q  56 ttgggttggtctggtggtattggctt-tggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-att 153  Q
    |||||||||| ||||||||||| ||| || ||| |||||||||||||||| ||| ||||||||||  ||||| ||| ||| ||| || |||||||| |||    
T  43728402 ttgggttggtatggtggtattgacttatgatct-gggagtgtgctcctcctcaaagtctcaggttcaattct-tccagtgtcaacttaggtgggctaatt 43728499  T
Q  154 tagctt 159  Q
    ||||||    
T  43728500 tagctt 43728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 51535647 - 51535707
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| ||||||||| || ||||||||||| ||||| ||| ||||||||||| |||||||||    
T  51535647 ggagtttgctcctccaca-ggtctcaggttcgattccctctggtgccaattttggtgggcta 51535707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 6e-30; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 2446308 - 2446423
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||||| | || ||||| ||| |||||||||||||||| |||| ||||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtggg 2446407  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  2446408 ctaatttagcttcttc 2446423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 22760862 - 22760965
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||||||||||||||||| ||| || | ||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||| ||||    
T  22760862 taacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgagtgg 22760961  T
Q  148 gcta 151  Q
    ||||    
T  22760962 gcta 22760965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 5273666 - 5273552
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| ||||||| || | |  |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtggg 5273567  T
Q  149 cta-tttagcttctt 162  Q
    ||| |||||||||||    
T  5273566 ctagtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 18056851 - 18056749
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||  ||||||||||||| ||||||| ||||||| ||||||||||||    
T  18056851 aacccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggtggg 18056752  T
Q  149 cta 151  Q
    |||    
T  18056751 cta 18056749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 15137549 - 15137668
Alignment:
Q  45 aactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttggg 144  Q
    |||||||||||||||||||| ||||||||| || ||| ||  || ||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||    
T  15137549 aactaacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttggg 15137648  T
Q  145 tgggct-atttagcttcttc 163  Q
    |||||| |||||| ||||||    
T  15137649 tgggctaatttagtttcttc 15137668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 26459487 - 26459393
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||||||||| || | ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  26459487 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg 26459393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 5579312 - 5579211
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    |||||||||||||||||  |||||||| ||||||| || | | ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  5579312 ctaacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtg 5579213  T
Q  147 gg 148  Q
    ||    
T  5579212 gg 5579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 29385817 - 29385704
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    |||||||||||||| | | |||| ||||||| || ||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  29385817 cccacttgggttggccggatggtgttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggct 29385718  T
Q  151 a-tttagcttcttc 163  Q
    | ||| ||||||||    
T  29385717 acttttgcttcttc 29385704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 41487362 - 41487474
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||||||||||| || ||||||||||| |||||   |||||||||||||| ||||||  ||||||||||||| ||||||    
T  41487362 aacccacttgggttggcctggtggtattggcttgggacttgggagtgttctcct---caaggtctcaggttcgattcttcccggtgccaatttaggtggg 41487458  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  41487459 ctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 5076051 - 5075938
Alignment:
Q  46 actaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggt 145  Q
    |||||||||||||||||    ||||||||||||||| | ||||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||| |||    
T  5076051 actaacccacttgggtt----tggtggtattggcttggttcttgggagtgtgctcctctgcaaggtctcaagttcgattcactccagtgccaatttaggt 5075956  T
Q  146 gggctatttagcttcttc 163  Q
    || ||||||| |||||||    
T  5075955 ggactatttaacttcttc 5075938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 43590906 - 43591022
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||| |||||||||||||||| || ||||||||||||||||||| ||| |||||||||| ||||||| |  |||||||||  |||||    
T  43590906 taacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgg 43591005  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  43591006 gctaatttagcttcttc 43591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 17041088 - 17040973
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| |||| |||||||| ||   ||| ||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtggg 17040989  T
Q  149 -ctatttagcttcttc 163  Q
     | |||||||||||||    
T  17040988 tcaatttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 20335907 - 20335792
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| | ||||||||||| || ||||||||||||||||||| | |||||||||||| ||||||| ||| || |||||||| ||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatggg 20335808  T
Q  149 ct-atttagcttcttc 163  Q
    || ||||| |||||||    
T  20335807 ctaatttaacttcttc 20335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 30579335 - 30579450
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||||||||||||||||  | | ||||||||| | ||||| |||||||||||||| |||| |||| ||||||||||| ||||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtggg 30579434  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  30579435 ctaatttagcttcttc 30579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 48125250 - 48125136
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||| ||||||| || | | |||||||||||||||| |||||||||||||  ||| || ||||||||||||| ||||||    
T  48125250 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctccg-aaggtctcaggttcaattttccccggtgccaatttcggtggg 48125152  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||| ||||||||    
T  48125151 ctagtttggcttcttc 48125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 19553454 - 19553567
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||| |||||||||| |||||||||||||||| || | ||||||||||||||||| |||||||| |||||  |||||| ||||| ||||||| ||||||    
T  19553454 aacccgcttgggttggcctggtggtattggctt-ggacctgggagtgtgctcctcctcaaggtcttaggttcaattctccccggttccaatttaggtggg 19553552  T
Q  149 cta-tttagcttctt 162  Q
    ||| |||||||||||    
T  19553553 ctactttagcttctt 19553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 31835192 - 31835306
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| |||||||| ||||||| |||  | ||||||||||||||| |||||||||||||| |||| || | ||||||||||| || |||    
T  31835192 aacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttggcggg 31835291  T
Q  149 cta-tttagcttctt 162  Q
    ||| |||||||||||    
T  31835292 ctagtttagcttctt 31835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 43215184 - 43215298
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| ||||||||||||| || | | ||||||||||||||| |||||||||||||| |||||||||   |||||||||| | |||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgaggggg 43215283  T
Q  149 cta-tttagcttctt 162  Q
     || |||||||||||    
T  43215284 ttagtttagcttctt 43215298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 38374675 - 38374563
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||  ||||||| ||||||| || | |  |||||||||||||| |||||||| ||||| ||||||| ||||||||||||| ||||||    
T  38374675 aacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtggg 38374576  T
Q  149 cta-tttagcttc 160  Q
    ||| |||||||||    
T  38374575 ctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 39631843 - 39631959
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| || ||||||||||||| || | |||||||  |||||||| |||||||||||||| |||||||||  ||||||||||| | ||    
T  39631843 taacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggg 39631942  T
Q  148 gcta-tttagcttcttc 163  Q
    | || ||||||||||||    
T  39631943 gttagtttagcttcttc 39631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 11721036 - 11720921
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| |||| |||||| |||||||||||||||| || | ||||| |||||||||||  ||||| |||| || ||||||| || |||||||||||||||||    
T  11721036 aaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttgggtggg 11720937  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  11720936 ctaatttagcttcttc 11720921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 18363695 - 18363789
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||| |||||  |  |||||||||||||||||| ||||||||||||||||||||||||  || ||||||||    
T  18363695 taacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaatttg 18363789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 22932787 - 22932674
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||| ||||||||||||||| || | |||||||| |||| |   |||| |||||||||||| ||||| |||||||||||| ||||||    
T  22932787 aacccacttgggttggtatggtggtattggcttgggacctgggagtgcgctcttattcaagatctcaggtttgaatctct-cggtgccaatttaggtggg 22932689  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  22932688 ctaatttagcttctt 22932674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 279992 - 279916
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    |||||||||| |||||||  |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  279992 ttgggagtgtactcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 23301678 - 23301599
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    |||||||||||||||| |||||||||||| ||| || |||||||||||||||||||   |||||||| ||||||||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctct 23301599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 2882991 - 2883064
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    ||||||||||||||| ||||||||||||||  |||||||| |||| |||||| ||||||||| |||||||||||    
T  2882991 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttaggtgggctacttagcttcttc 2883064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 6426129 - 6426023
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgc---tcctccgcaaggtctcaggtttgattctctccggtgccaatttggg 144  Q
    ||||||||||||||||| |||||||| ||||||| |||||| ||||| |||   |||| | ||||||| ||||||||||||||  |||||||||||| ||    
T  6426129 taacccacttgggttggcctggtggtgttggcttgggtctttggagtatgcttttcctgctcaaggtcccaggtttgattctcctcggtgccaatttcgg 6426030  T
Q  145 tgggcta 151  Q
    | |||||    
T  6426029 ttggcta 6426023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 48771936 - 48772052
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||||  ||||||||||||||| ||   |||||||||||||||||   |||||||||||| |||| || |  || ||||||| ||||    
T  48771936 ctaacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtg 48772035  T
Q  147 ggct-atttagcttctt 162  Q
    |||| ||||||||||||    
T  48772036 ggctaatttagcttctt 48772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 25590611 - 25590726
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||  ||| ||||||||||||  |   ||||||||||||||||| | ||||||| |||| |||| ||| ||||| ||||||| |||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtggg 25590710  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  25590711 ctaatttagcttcttc 25590726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 21558173 - 21558243
Alignment:
Q  94 tgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||| | |||||||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 33181286 - 33181172
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||  || ||||||| ||||| || ||||||||||||||||  | |||| ||||||||| ||||| |||  ||| |||||||||||||    
T  33181286 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctccaactcaagatctcaggttcgattccctctagtgtcaatttgggtggg 33181187  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  33181186 ctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 41519335 - 41519226
Alignment:
Q  54 acttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-at 152  Q
    ||||||||||| || ||||||||| ||| ||  || ||||||||||||||| |||||||||||||| | |||||| | ||| |||||| |||||||| ||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctct-ctgtgtcaatttaggtgggctaat 41519237  T
Q  153 ttagcttcttc 163  Q
    |||||||||||    
T  41519236 ttagcttcttc 41519226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 44628263 - 44628146
Alignment:
Q  45 aactaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttggg 144  Q
    ||||| |||||||||||||| |||||| | || |||| || | | ||||||||||||||| ||| |||||| ||||||||| || ||||| |||||| ||    
T  44628263 aactatcccacttgggttggcctggtgttgttagcttgggaccttggagtgtgctcctcctcaaagtctcaagtttgattccct-cggtgtcaattttgg 44628165  T
Q  145 tgggct-atttagcttctt 162  Q
    |||||| ||||||||||||    
T  44628164 tgggctaatttagcttctt 44628146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 4566501 - 4566412
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||| || ||||||||| ||| || | | |||||||  |||| | |||||||||||||||||||||||| |||||||||||    
T  4566501 ccacttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaattt 4566412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 30442487 - 30442585
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| |  ||||||||||||| || | ||||||| ||||||||| |||||||| ||||| ||||||||  || | ||||||||||||    
T  30442487 taacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct--ggagtcaatttgggtgg 30442584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 7801178 - 7801250
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    ||||||||||||| |||| |||||||||||| ||| || | ||||||||||||||||  ||||||||||||||    
T  7801178 ctaacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggtt 7801250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 9183228 - 9183152
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||| ||| |||||||||| |||| |||| |||| ||||||||||||||| |||||| ||||||    
T  9183228 tgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttc 9183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 15905746 - 15905635
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    ||||||||||||| |||| ||||||||||| || | |||||||||||||||||   |||||||||||| ||||||| |   || ||||||||||||| |     
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcc-ttaggtctcaggttcgattctccctaatgtcaatttgggtgggtta 15905648  T
Q  151 atttagcttcttc 163  Q
    |||||||||||||    
T  15905647 atttagcttcttc 15905635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 23552118 - 23552198
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||||||||||| || ||| ||||| ||| || | ||||||||||||||||| |||||||||| ||| |||||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctc 23552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 33460499 - 33460383
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctcc-gcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||| |||||||||||| || || | | |||||||| ||||||  ||||||||||| || ||||||| |||||| ||||||  ||||    
T  33460499 aacccacctgggttggtttggtggtattggtttgggacctaggagtgtggtcctccttcaaggtctcagattcgattctccccggtgtcaatttatgtgg 33460400  T
Q  148 gcta-tttagcttcttc 163  Q
    |||| ||||||||||||    
T  33460399 gctagtttagcttcttc 33460383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 41519144 - 41519072
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    |||||||||||| | ||||||||||| || |||| ||||||||| ||||||||||||||| ||||||||||||    
T  41519144 gagtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttgggtgggctaatttagcttctt 41519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 7744186 - 7744095
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||| |||||| || ||||||| ||||| ||   ||||| | ||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  7744186 cccacttaggttggcctagtggtataggcttaggatctgggactatgctcctcctcaaggtctcaggtttgattctctctggtgcaaatttg 7744095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 25021412 - 25021345
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctca 115  Q
    ||||||||||||||||| || ||||||||||||| || | ||||||||||||||||| ||| ||||||    
T  25021412 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 26526290 - 26526388
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| |||| ||||||||||||||||| ||| ||  ||| |||||||||||||| |||  |||| || |||||||||||||||| |||||||| ||||    
T  26526290 aacccatttggattggtctggtggtattgacttaggatttgagagtgtgctcctcctcaaaatctc-gggttgattctctccggtgtcaatttggatggg 26526388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 48039723 - 48039621
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttgg-tcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||| |||||||| |||||||  | |||||| ||| ||||||| ||||||||||||||||  |||||| | ||||||||||| ||| |    
T  48039723 aacccacttgggttggcctggtggtgttggcttgcgatcttgg-agtatgctccttcgcaaggtctcaggttctattctccctggtgccaatttcggttg 48039625  T
Q  148 gcta 151  Q
    ||||    
T  48039624 gcta 48039621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 4572316 - 4572258
Alignment:
Q  106 caaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||    
T  4572316 caaggtctcaggttcgattctctccggtgtcaatttgggtgggctaatttatcttcttc 4572258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 33869522 - 33869428
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || || ||||||||||  | | ||| ||||||||||| | ||||||||| |||| ||||||||| |||| |||||||    
T  33869522 taacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaatttg 33869428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 42836078 - 42836008
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggt 118  Q
    ||||||||||||||||| || ||||||||||||| || | ||||||||||||| ||| ||||| |||||||    
T  42836078 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 45709784 - 45709682
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||| || |||||||| |||| ||   || |||||||||||||| | |||||||||||| |||| |||||| | ||||||| ||||||    
T  45709784 aacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtggg 45709685  T
Q  149 cta 151  Q
    |||    
T  45709684 cta 45709682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 48079668 - 48079754
Alignment:
Q  74 attggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagctt 159  Q
    |||||||| || | |||| ||||| |||| | | |||||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  48079668 attggcttgggacctgggtgtgtggtcctgctcgaggtctcaggtttgattctctccggtgctaatttgagtgggctaatttagctt 48079754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 25655304 - 25655211
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||| ||||||||| | ||||||||| ||| ||   || ||||||| |||||| |||||| ||||||| ||||||||| ||||||||||||    
T  25655304 aacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttg 25655211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 3280562 - 3280447
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||   ||||||||||||||| || |  | |||||||||||||| ||||||||||  || |||| || ||||||||||||| | |||    
T  3280562 taacccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaaggtctca-attcgattatccccggtgccaatttagatgg 3280464  T
Q  148 gct-atttagcttcttc 163  Q
     || |||||||||||||    
T  3280463 actaatttagcttcttc 3280447  T

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Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 17113794 - 17113910
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||| ||| || || |||||||||| |  | |||||||||||| |||| |||||||||| ||| ||||||||| | ||| |||||| | ||    
T  17113794 taacccacttggggtggcctagttgtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgagggg 17113893  T
Q  148 gcta-tttagcttcttc 163  Q
    | || ||||||||||||    
T  17113894 gttagtttagcttcttc 17113910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 43663168 - 43663056
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    ||||||||||||| ||| |||||||| ||| || | | |||| ||| |||||| | || ||||||||| || ||||||||||  |||||||||||| ||     
T  43663168 ccacttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtggacta 43663069  T
Q  151 atttagcttcttc 163  Q
    |||||||||||||    
T  43663068 atttagcttcttc 43663056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 24513796 - 24513899
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| || |||||||||||||  |  |||||||||| || ||||   |||||||||||| |||| || | | || ||||||||||||    
T  24513796 taacccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggtgg 24513895  T
Q  148 gcta 151  Q
    ||||    
T  24513896 gcta 24513899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 33222384 - 33222463
Alignment:
Q  63 ggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||| ||||||||||||| || | ||| ||||| ||| ||| |||||||||||||| ||||||||| |||| |||||||    
T  33222384 ggtctagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttg 33222463  T

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Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 37233649 - 37233547
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||   ||||| ||||||||| ||   |||||||||||||||||  ||||||||||| | || || | ||| |||||||||||||||    
T  37233649 taacccacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcctccttaaggtctcagggtcgactc-ccccgttgccaatttgggtgg 37233551  T
Q  148 gcta 151  Q
    ||||    
T  37233550 gcta 37233547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 42711962 - 42712069
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-a 151  Q
    ||||||||||||  | |||||||| |||| |  | ||||||||||||||||| |||||||||| ||| ||||||| |  ||| |||||| |||||||| |    
T  42711962 cacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaa 42712061  T
Q  152 tttagctt 159  Q
    ||||||||    
T  42712062 tttagctt 42712069  T

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Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 2962459 - 2962552
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||| ||||||| |||||||||| || |  | || |||||||||||||| |||| ||||||||| ||||||||| ||  ||||||||    
T  2962459 taacccacttgg-ttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctggaaccaatttg 2962552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 5668626 - 5668532
Alignment:
Q  70 tggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||| || | ||| ||||||||||||| | |||||||||| | |||||||||||| |  |||||  ||||||| |||||||||||||    
T  5668626 tggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccggagttaatttatgtgggctaatttagcttcttc 5668532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 11700185 - 11700266
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||| ||||||||  | |||| |||| ||||||||| |||||||||||||| |||||||| | ||||||||||| ||||||||    
T  11700185 gtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctct-ctgtgccaatttgagtgggcta 11700266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 22696358 - 22696415
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||||||||||| ||||||    
T  22696358 ggagtgtgctcctct-caaggtctcaggtttgattccctctggtgccaatttcggtggg 22696415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 27776172 - 27776242
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    |||||||||||||||| ||||||||||  |||| || |||| |||||||||||||| | | ||||||||||    
T  27776172 aacccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctcctcctcgaagtctcaggtt 27776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 7309390 - 7309470
Alignment:
Q  83 ggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||| |||||||||||||||| | |||||||| ||| |||||||||| ||| ||||||  ||||||| |||||||||||||    
T  7309390 ggtctggggagtgtgctcctcctcgaggtctcaagttcgattctctcc-gtgtcaatttaagtgggctaatttagcttcttc 7309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 14058253 - 14058334
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctcc 130  Q
    ||||| |||| ||||| |||||||||||| ||| |  | || |||||||||| ||| |||||||||||||| ||||||||||    
T  14058253 aacccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctcc 14058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 14368281 - 14368362
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctcc 130  Q
    ||||| |||| ||||| |||||||||||| ||| |  | || |||||||||| ||| |||||||||||||| ||||||||||    
T  14368281 aacccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctcc 14368362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 41992276 - 41992329
Alignment:
Q  98 ctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||| ||||||||| |||||||||||| |||||||||| |||||| |||||    
T  41992276 ctcctcctcaaggtctctggtttgattctccccggtgccaacttgggtaggcta 41992329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 25132435 - 25132340
Alignment:
Q  68 ggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||| ||| || | | ||||||||||||| |  ||||||||||||| ||||||| ||  ||| |||||||||||||| |||||||||||||    
T  25132435 ggtggtattgacttaggacctaggagtgtgctccttcttaaggtctcaggttcgattctc-ccaatgctaatttgggtgggctaatttagcttcttc 25132340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 18884478 - 18884403
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||||||||||| ||||||||||| |||||| | | |||||||||| || |  ||||||||| ||| |||||||    
T  18884478 ccacttgggttggtttggtggtattgactttggacctcggagtgtgcttcttcttaaggtctcaagttcgattctc 18884403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 29785334 - 29785263
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    ||||||||||||| |||||||||| ||| |||||| || |||||||||||| | ||| || |||||||||||    
T  29785334 agtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaatttgagggggttagtttagcttctt 29785263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 37085618 - 37085547
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||||||  ||||||||||||||| ||  |||||||||||||| ||| | |||| ||||||| |||||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 37162388 - 37162333
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||| || | |||||||||| ||| ||||||||| ||||||||||||    
T  37162388 ttgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttg 37162333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 13106817 - 13106747
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagctt 159  Q
    ||||||| ||||||| |||||||||||||| ||||||||| | ||| |||||| | ||||| |||||||||    
T  13106817 ggagtgtactcctcctcaaggtctcaggttcgattctctctgatgctaatttgagcgggctaatttagctt 13106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 21854550 - 21854616
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcagg 117  Q
    |||||||||||||| ||| |||||||||||  ||   ||||||||||||||||| ||| ||||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 23330901 - 23330844
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    |||||||||||||  |||||||||||||| || || ||||||||||||||| |||||||    
T  23330901 gagtgtgctcctct-caaggtctcaggttcgactccctccggtgccaatttcggtgggc 23330844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 23735303 - 23735237
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctca 115  Q
    ||||||||||||||| ||| ||||||||||||| |   |||||| ||||||||||| ||| ||||||    
T  23735303 aacccacttgggttgatctagtggtattggcttagaatttgggattgtgctcctcctcaaagtctca 23735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 24438303 - 24438209
Alignment:
Q  69 gtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    |||||||||| || || ||||||||||||||| | |  ||||| |||| || ||||||||| |||| |||||||  |||||| ||||||||||||    
T  24438303 gtggtattggtttgggacttgggagtgtgctctttcttaaggtttcagattcgattctctctggtgtcaatttgaatgggctaatttagcttctt 24438209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 47824633 - 47824563
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttctt 162  Q
    ||||||||||||| ||| |||||| ||| |||| ||||||||| ||||||| ||||   ||||||||||||    
T  47824633 agtgtgctcctcctcaaagtctcatgttcgattgtctccggtgtcaatttgagtggttaatttagcttctt 47824563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 2751309 - 2751369
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  2751309 ggagtttgctcctcca-aaggtctcaggttcgattccctctggtgccaatttcggtgggcta 2751369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 16708519 - 16708450
Alignment:
Q  61 ttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctcc 130  Q
    |||||||||||||||||| ||||| |||||||||||  |||||| | ||  |||| ||| ||||||||||    
T  16708519 ttggtctggtggtattgggtttggacttgggagtgtattcctcctcgagaactcatgttcgattctctcc 16708450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 17682755 - 17682686
Alignment:
Q  61 ttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctcc 130  Q
    |||||||||||||||||| ||||| |||||||||||  |||||| | ||  |||| ||| ||||||||||    
T  17682755 ttggtctggtggtattgggtttggacttgggagtgtattcctcctcgagaactcatgttcgattctctcc 17682686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 20952222 - 20952133
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||  ||| ||||||||| || || | ||||||||||||||||| |||  |||||| || |||| ||||| ||| ||||||    
T  20952222 ccacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctcctcaaaatctcagattcgattatctcccgtgtcaattt 20952133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 35513467 - 35513580
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    ||||| ||||||||| || |||||||| |||| || |||| |||||||||||||| | |  ||||| ||| |||| |||||| ||  ||||| ||||| |    
T  35513467 acccatttgggttggcctagtggtatttgcttgggacttgagagtgtgctcctcctcgatatctcatgttcgattttctccgatggtaatttaggtggac 35513566  T
Q  150 t-atttagcttctt 162  Q
    | ||||||||||||    
T  35513567 taatttagcttctt 35513580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 39499795 - 39499718
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattct 126  Q
    |||||||||||||||| || ||||||||||||| || | || ||||||| |||||   ||||||||| ||| ||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgattct 39499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 49050525 - 49050468
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| |||||||   |||||||||||| ||||||| ||||||||||||| ||||||    
T  49050525 gagtgtactcctccttgaggtctcaggttcgattctccccggtgccaatttaggtggg 49050468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 6e-30; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 19940948 - 19940833
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||| || |||| |||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||    
T  19940948 aacccacttgggttggtctggtggtgttagcttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaatttatgtggg 19940849  T
Q  149 ct-atttagcttcttc 163  Q
    ||  ||||||||||||    
T  19940848 ctggtttagcttcttc 19940833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 31794340 - 31794225
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| || ||||||||||||||||||| ||||||||   ||| ||||| ||| |||| |||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtggg 31794241  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  31794240 ctaatttagcttcttc 31794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 40257399 - 40257514
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||||||||||||||||  | | ||||||||||||||||| | |||||||| |||  ||||| ||||||| |||||||||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtggg 40257498  T
Q  149 cta-tttagcttcttc 163  Q
    ||| ||||||||||||    
T  40257499 ctagtttagcttcttc 40257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 51814494 - 51814605
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||| |||||||| |||  |   || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtggg 51814593  T
Q  149 ct-atttagctt 159  Q
    || |||||||||    
T  51814594 ctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 6122794 - 6122909
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||||||||  || ||||||| ||||| || ||||||||||||||||||| |||||||||||||| ||||| |||  ||| |||||||||||||    
T  6122794 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtggg 6122893  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  6122894 ctaatttagcttcttc 6122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 52116858 - 52116743
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||| |||||||||||||||| || ||||||||||||||||||| ||| ||||||||||  |||||| |  |||||||||  |||||    
T  52116858 taacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgg 52116759  T
Q  148 gct-atttagcttctt 162  Q
    ||| ||||||||||||    
T  52116758 gctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 9165272 - 9165178
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||| || ||||||||||||| || | ||||||||||||||||| ||| ||||||||||  |||||||| ||||||||||||    
T  9165272 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttg 9165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 34228874 - 34228975
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||| |||||||||||||| ||||||| || | | |||||||| |||||  |||||||||||||| ||||||||||||||||||||| ||||||    
T  34228874 aacccacttgagttggtctggtggtgttggcttgggacctcggagtgtgttcctct-caaggtctcaggttggattctctccggtgccaattttggtggg 34228972  T
Q  149 cta 151  Q
    |||    
T  34228973 cta 34228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 44126396 - 44126510
Alignment:
Q  50 acccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    ||||||||||||||| |||||||||||| | | || | ||||||||||||||||| | ||||||||| ||||||||||||  |||||||||| ||| |||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggc 44126495  T
Q  150 t-atttagcttcttc 163  Q
    | |||||||||||||    
T  44126496 taatttagcttcttc 44126510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 10526822 - 10526938
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| |||||||||||  ||||||||||||| || | ||||||| ||||||||| ||||||||||| || ||||||||| || | ||||||||||||    
T  10526822 taacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgg 10526921  T
Q  148 gct-atttagcttcttc 163  Q
    | | |||||||||||||    
T  10526922 gttaatttagcttcttc 10526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 16893393 - 16893509
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  ||| ||||||||||||  |  |||||||||| ||||||| | |||||||||||| |||| ||||||||| ||||||| ||||    
T  16893393 taacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgg 16893492  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  16893493 gctaatttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 18037690 - 18037574
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||||||| || |||||| || || |||||||||||||||||   | || ||||| ||| |||||||||||||||| |||| |||||    
T  18037690 taacccacttgggttggtctgatgatattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgg 18037591  T
Q  148 gct-atttagcttcttc 163  Q
    ||| |||||||||||||    
T  18037590 gctaatttagcttcttc 18037574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 44961764 - 44961879
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||||| ||||||||| ||||  |  ||  |||||||||||||| || ||||||||||| |||||||||  ||| ||||||||||||    
T  44961764 taacccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgg 44961863  T
Q  148 gct-atttagcttctt 162  Q
    ||| ||||||||||||    
T  44961864 gctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 33700847 - 33700757
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||||| || ||||||||||||| |    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 36371470 - 36371584
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| || ||||||||||||| |  | ||||||||||||||||| |||||||| ||||| ||||||||| | |||||||||| | |||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgaggggg 36371569  T
Q  149 cta-tttagcttctt 162  Q
     || |||||||||||    
T  36371570 ttagtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 36428717 - 36428827
Alignment:
Q  54 acttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-t 152  Q
    ||||||||||| | |||||| ||||||| |  | | ||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |    
T  36428717 acttgggttggccgggtggtgttggcttggtaccttggagtatgctcctcctcaaggtctcatgtttgattctccccggtgccaatttgggtgggctagt 36428816  T
Q  153 ttagcttcttc 163  Q
    || ||||||||    
T  36428817 tttgcttcttc 36428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 17296986 - 17297099
Alignment:
Q  51 cccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattct-ctccggtgccaatttgggtgggc 149  Q
    |||||||||||||| || |||||  | |||| || | | ||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||||    
T  17296986 cccacttgggttgggcttgtggtggtagcttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggc 17297085  T
Q  150 t-atttagcttctt 162  Q
    | ||||||||||||    
T  17297086 taatttagcttctt 17297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 43445969 - 43446074
Alignment:
Q  55 cttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tt 153  Q
    ||||||||||  || |||| ||||||| |||| | ||||||||||||||| |||||||||| ||| ||||||| |||||||||||||| |||||||| ||    
T  43445969 cttgggttggcttgatggtgttggcttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggctagtt 43446068  T
Q  154 tagctt 159  Q
    ||||||    
T  43446069 tagctt 43446074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 952511 - 952623
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||| |||||||||||||| ||||||| || | ||||||||||||| ||| ||| |||||||||| ||||||| ||| || |||||| ||||||    
T  952511 aacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaatttaggtggg 952610  T
Q  149 ct-atttagcttc 160  Q
     | ||||||||||    
T  952611 ttaatttagcttc 952623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 1094524 - 1094640
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||||| || |||||||| ||| |  | || |||||||||||||| | ||||||||  || ||||||||||||||||||||| |||||    
T  1094524 taacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgg 1094623  T
Q  148 gct-atttagcttcttc 163  Q
    ||| ||||| |||||||    
T  1094624 gctaatttaacttcttc 1094640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 4280528 - 4280412
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||| || || || ||||| ||| || |||| ||||||||| ||||  |||||||||||||||||||||| |||||| ||||||||||     
T  4280528 taacccacttgggttagtatgatgatattgacttgggacttgagagtgtgcttctcctgaaggtctcaggtttgattctcttcggtgctaatttgggtga 4280429  T
Q  148 gct-atttagcttcttc 163  Q
    ||| ||||| |||||||    
T  4280428 gctaatttaacttcttc 4280412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 45266833 - 45266945
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||| ||||| |||  ||| ||| ||| || ||| ||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||| |||    
T  45266833 taacccacttgagttggcctgtcggtgttgacttggggctttggagtttgctcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgg 45266932  T
Q  148 gcta-tttagctt 159  Q
    |||| ||||||||    
T  45266933 gctagtttagctt 45266945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 51281394 - 51281466
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||    
T  51281394 agtgtgctcctcctcaaggtctcaggtttgattctctccggcgccaatttgggtaagctagtttagcttcttc 51281466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 8177258 - 8177143
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| ||| ||||| || ||||||||||||| ||   ||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||| | |||    
T  8177258 aacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgaggggg 8177159  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  8177158 ttagtttagcttcttc 8177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 21268069 - 21267954
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||| ||||| || || |||||||||| || ||||||||||||||||||| | ||||||  |||||||||||||| ||| |||||||   ||||    
T  21268069 aacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctctctggttccaatttttttggg 21267970  T
Q  149 ct-atttagcttcttc 163  Q
    || |||||||||||||    
T  21267969 ctaatttagcttcttc 21267954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 21547556 - 21547441
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| ||||||||||| || ||||||||||||| || | |||||| |||||||||| | |||| ||||||| ||||||||| | ||||||||| ||||||    
T  21547556 aaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtggg 21547457  T
Q  149 cta-tttagcttcttc 163  Q
    ||| |||| |||||||    
T  21547456 ctagtttaacttcttc 21547441  T

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Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 25297772 - 25297887
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||| ||||||||| ||| ||   || |||||||||||||| | |||||| ||||||||||||| |||| | |||||| ||||||    
T  25297772 aacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtggg 25297871  T
Q  149 ct-atttagcttcttc 163  Q
     | |||||||||||||    
T  25297872 ataatttagcttcttc 25297887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 31605924 - 31605809
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||  ||||| ||| |||| ||||||| || | | | ||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||    
T  31605924 aacccacttatgttggcctgatggtgttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtggg 31605825  T
Q  149 cta-tttagcttcttc 163  Q
    ||| |||||| |||||    
T  31605824 ctagtttagcctcttc 31605809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 37400274 - 37400385
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| ||||||||||||||||||||||||||||  | | ||  |||||||||||||  ||||||||| ||| |||||| |||||||||||||||| |||     
T  37400274 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttggatgga 37400373  T
Q  149 cta-tttagctt 159  Q
    ||| ||||||||    
T  37400374 ctagtttagctt 37400385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 4824975 - 4825069
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||||||| |||| ||||||| || | | ||||||||||||||  ||||||||||||||||||||||   ||||| |||||||||||    
T  4824975 cacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctccgtggtgctaatttgggtgg 4825069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 15786393 - 15786303
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| || |||||||||| ||   ||||||||||||||||| |||||||||||||| ||||||||  |||| |||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaatttg 15786303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 37046985 - 37047086
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||||||||||||||||||| ||||||| || | | ||||||||||||| | |||||||||||||||||||| | | ||| | ||||| ||||||    
T  37046985 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtttgattccccctggtacaaattttggtggg 37047083  T
Q  149 cta 151  Q
    |||    
T  37047084 cta 37047086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 41508831 - 41508945
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||||||||| ||| || ||   ||||||||||||||||| ||||||||||| ||| ||||  ||||||| ||| ||| |||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattccatccggtgtcaacttgagtggg 41508930  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  41508931 ctaatttagcttctt 41508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 24019021 - 24019138
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtc-ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||| | || ||| ||||||| |||| || | ||||||||||||| |||||||| ||||| |||||||  |||| ||||||| ||||    
T  24019021 taacccacttgggttggcccggaggtgttggcttgggtcctttgtagtgtgctcctcctcaaggtcttaggttcgattctcctcggtaccaatttcggtg 24019120  T
Q  147 ggcta-tttagcttcttc 163  Q
    ||||| ||||||||||||    
T  24019121 ggctagtttagcttcttc 24019138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 27476826 - 27476733
Alignment:
Q  70 tggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    |||||||||||| || ||| ||||||||||||||| | || ||||| ||||||||||||| |||||| |||| |||||||| ||||||||||||    
T  27476826 tggtattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 31383861 - 31383772
Alignment:
Q  62 tggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||||||| || | |||||||||||||||||    ||||||||||| ||||||||  |||||||||||||||||||||    
T  31383861 tggtccggtggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctcttaggtgccaatttgggtgggcta 31383772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 2799901 - 2799977
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| | ||| || ||||||||||||    
T  2799901 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 2799977  T

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Target: chr1; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 19528403 - 19528319
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggt 133  Q
    |||||||||||||||| |||||||||||||||| ||   |  |||||||||||||| |||||||||||||| ||||||| |||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctccccggt 19528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 24730387 - 24730495
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    ||||||||||||| || ||||||||| |||  |   ||||||||||||||||  ||||||| |||||||||| |||  |||||||||||||||||||||     
T  24730387 ccacttgggttggcctagtggtattgtcttgagatctgggagtgtgctcctcttcaaggtcccaggtttgatcctcctcggtgccaatttgggtgggcta 24730486  T
Q  151 atttagctt 159  Q
    |||||||||    
T  24730487 atttagctt 24730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 17745333 - 17745218
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||| |||||||||||| || ||||||||||||| || | || | |||||||||||| | |||||||| ||| ||||||||| |||| |||||| |||||    
T  17745333 taacgcacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggtgg 17745234  T
Q  148 gctatttagcttcttc 163  Q
       |||||||||||||    
T  17745233 ttaatttagcttcttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 18459307 - 18459208
Alignment:
Q  50 acccacttgggttggtctggtggta-ttggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||||| |||||| ||||||| || |||||||||||||||||||   |||||| || ||||||||||||  |||| |||||| |||||    
T  18459307 acccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggtcttagatttgattctctcatgtgctaatttgagtggg 18459208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 24047174 - 24047063
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-a 151  Q
    |||||||||||||||  ||||||||||||  | ||||||||||||||||||| | |||| ||| ||| ||||||| || |||||||||| ||| |||| |    
T  24047174 cacttgggttggtctcatggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaa 24047075  T
Q  152 tttagcttcttc 163  Q
    |||| |||||||    
T  24047074 tttaacttcttc 24047063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 8904414 - 8904507
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||| || || |||||| ||| ||   || |||||||||||||| |||||||||| ||| ||||||||| ||||||||||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttg 8904507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 12587312 - 12587384
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||| | |||||||||||| |||||||||||||| |||||| |||||||| |||||||||||||    
T  12587312 gagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttc 12587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 15064960 - 15065079
Alignment:
Q  47 ctaacccacttgggttggtctggtggtattggcttt---ggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||||||||||||||| ||| || |||||||||    || | || |||||||||| ||| ||||||||||||||  ||| || |||||| ||||||||    
T  15064960 ctaacccacttgggttggcctgatgatattggcttcttaggacctgagagtgtgctcatcctcaaggtctcaggttcaattttccccggtgtcaatttgg 15065059  T
Q  144 gtgggct-atttagcttctt 162  Q
    ||||||| ||||||||||||    
T  15065060 gtgggctaatttagcttctt 15065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 3265961 - 3266017
Alignment:
Q  86 cttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||||    
T  3265961 cttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaatttg 3266017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 4566548 - 4566628
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||||||||||||| || ||| ||||||||| |  | ||||||||||||||||| || ||||||||||| |||||||||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctc 4566628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 21694446 - 21694537
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||||||||||||  ||||||||||||||||  | |||||||||||||||||   |||||||||||||| ||||||   | ||||||||||||    
T  21694446 aacccacttgggttgacctggtggtattggcttgagacttgggagtgtgctcct---caaggtctcaggttcgattcttctcagtgccaatttgg 21694537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 50901580 - 50901695
Alignment:
Q  48 taacccacttgggttggtctggtggta-ttggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    ||||||||||||||||| || |||||| ||||||| || | ||| ||||||||||||| | ||||||||  || |||||||| | |||||||||| ||||    
T  50901580 taacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctct-cagtgccaatttaggtg 50901678  T
Q  147 ggct-atttagcttctt 162  Q
    |||| ||||||||||||    
T  50901679 ggctaatttagcttctt 50901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 15581218 - 15581116
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| |||||||| ||||||| || | | ||||||||||||| |  |||||||||||||  |||||| |||||||  |||| |||||    
T  15581218 taacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctaaaggtctcaggttcaattctccccggtgctgatttcggtgg 15581120  T
Q  148 gcta 151  Q
    ||||    
T  15581119 gcta 15581116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 45235455 - 45235400
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctcc 104  Q
    |||||||||||||||||||| ||||||||| || || |||||||||||||||||||    
T  45235455 aacccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcc 45235400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 16170054 - 16169976
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||||||||||| | |||||||||||| ||| || | |||||||||| |||||| |||||| ||||||| |||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 2219972 - 2220053
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctcc 130  Q
    ||||||||||||||| ||||||||||||||||| |  | ||  |||||||| |||| | |||||||||||| ||||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctcc 2220053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 11063556 - 11063649
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||| |||||||| ||| ||||||||||||| || | ||  |||||| |||||| |||||||| ||||| |||||||||  |||||||||||    
T  11063556 aacccatttgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctctagtgccaatttg 11063649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 39966134 - 39966207
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttctt 162  Q
    ||||||| ||||||| |||||||||||||| | ||||| ||||||| |||||||||| |||| |||||||||||    
T  39966134 ggagtgtactcctcctcaaggtctcaggttcgtttctccccggtgctaatttgggtgtgctagtttagcttctt 39966207  T

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Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 42949327 - 42949254
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    ||||||||||||||| | ||||||||  ||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  42949327 ggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagcttctt 42949254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 51703778 - 51703859
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    ||||||| |||||||||||| ||||||||||||| |    ||||||||||||||||| ||| || ||||||| |||||||||    
T  51703778 taacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctc 51703859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 6128051 - 6127948
Alignment:
Q  60 gttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagct 158  Q
    |||||||||||||| |||| || || | | |||| |||||||||  |||||||||| ||| ||||||| ||||||||||||| ||||||||| ||| |||    
T  6128051 gttggtctggtggtgttggtttgggaccttggagcgtgctcctct-caaggtctcaagttcgattctccccggtgccaattttggtgggctagtttggct 6127953  T
Q  159 tcttc 163  Q
    |||||    
T  6127952 tcttc 6127948  T

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Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 39964546 - 39964605
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  39964546 ggagtgtgctcctct-caaggtctcaggtttgattccctctggtgccaatttcggtgggct 39964605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 40810506 - 40810582
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagcttcttc 163  Q
    |||||||||| |||||  |||||||||||||| ||||||||| |||||||||||| | ||| || ||||||||||||    
T  40810506 tgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttc 40810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 6650595 - 6650710
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||| || |||||| || ||||||||||||| ||    |||||| ||||||||| ||| |||||||||| ||||||||| |||| |||||| |||||     
T  6650595 aacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtgga 6650694  T
Q  149 cta-tttagcttcttc 163  Q
     || ||||||||||||    
T  6650695 ttagtttagcttcttc 6650710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 52336839 - 52336748
Alignment:
Q  60 gttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| || ||||||||||||| ||   |||||||||||||||||  ||| ||||||||| |||| |||| |||| |||||||| |||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggcta 52336748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 1247152 - 1247206
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||| ||||||||    
T  1247152 tgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttg 1247206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 39012291 - 39012392
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    ||||||||| |||||| || ||||| ||||||| || | | ||||||||||| ||  |||||||| ||||||||||| |  |||||||||||| ||||||    
T  39012291 aacccactttggttggcctagtggtgttggcttgggaccttggagtgtgctcttct-caaggtcttaggtttgattcccctcggtgccaatttcggtggg 39012389  T
Q  149 cta 151  Q
    |||    
T  39012390 cta 39012392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 52029972 - 52029910
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattct-ctccggtgccaatttgggtgggcta 151  Q
    ||||||||||||| | |||||||||||||| |||||| | ||| |||||||||||||||||||    
T  52029972 ggagtgtgctccttctcaaggtctcaggttcgattctcccccgatgccaatttgggtgggcta 52029910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 12370202 - 12370247
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggt 133  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||    
T  12370202 tgggagtgtgctcctcctcgaggtctcatgtttgattctctccggt 12370247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 17439956 - 17440009
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||||||| | |||||||| |||||||||||||| ||| ||||||    
T  17439956 tgggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaattt 17440009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 30677210 - 30677270
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  30677210 ggagtttgctcctcca-aaggtctcaggtttgattccctctggtgccaatttcggtgggcta 30677270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 16539656 - 16539700
Alignment:
Q  105 gcaaggtctcaggtttgattctctccggtgccaatttgggtgggc 149  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||    
T  16539656 gcaaggtctcaggtttgattccctctggtgccaattttggtgggc 16539700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 30203260 - 30203188
Alignment:
Q  92 agtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||| ||||||| ||||||||||||||  |||||||||| ||||||||| ||  |||| |||||||||||||    
T  30203260 agtgttctcctcctcaaggtctcaggttcaattctctccgatgccaattttggctggctaatttagcttcttc 30203188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 38947511 - 38947471
Alignment:
Q  86 cttgggagtgtgctcctccgcaaggtctcaggtttgattct 126  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  38947511 cttgggagtgtgctcctcctcaaggtctcaggttcgattct 38947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 48400178 - 48400269
Alignment:
Q  55 cttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| ||| |||||||||||| || | | |||| |  ||||||  |||||||||||||  ||||||||||||||||||||| |||||    
T  48400178 cttgggttggcctgatggtattggcttgggaccttggagcgcactcctct-caaggtctcaggtgcgattctctccggtgccaatttaggtgg 48400269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 48619286 - 48619170
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||| ||||| | ||||||||||| |||  | |||||||||||| |  ||| |||| |||||||||  ||| ||||||||| ||||||| ||||    
T  48619286 taacccacttaggttgatatggtggtattgacttgagacttgggagtgtgtttttcctcaagatctcaggttctattatctccggtgtcaatttgagtgg 48619187  T
Q  148 gct-atttagcttcttc 163  Q
     || ||||| |||||||    
T  48619186 actaatttaacttcttc 48619170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 8077698 - 8077741
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  8077698 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 8077741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 9500501 - 9500458
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  9500501 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 9500458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 9964441 - 9964540
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||||||| | ||| || ||||| ||| ||   ||||||||||||| ||| ||| ||||||||||||||| ||||| |||| ||||| | |||||||    
T  9964441 ccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtgctaattttgatgggcta 9964540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 10150942 - 10150831
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct- 150  Q
    |||||||| || || ||||||||||   || || ||||||||||| ||||||| ||| ||||||||||  |||||||| |||| || |||| |||| ||     
T  10150942 ccacttggattagtttggtggtatttatttgggacttgggagtgtactcctcctcaaagtctcaggttcaattctctcaggtgtcagtttgagtggacta 10150843  T
Q  151 atttagcttctt 162  Q
    ||||||||||||    
T  10150842 atttagcttctt 10150831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 15059548 - 15059505
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  15059548 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 15059505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 18646904 - 18646947
Alignment:
Q  108 aggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  18646904 aggtctcaggttcgattctctctggtgccaatttcggtgggcta 18646947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 35692132 - 35692057
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    ||||||| ||| |||||||||||||| ||| | |||||||||||   |||||| |||||| |||||||| ||||||    
T  35692132 ccacttgagttagtctggtggtattgacttggatcttgggagtgcaatcctcctcaaggtatcaggtttaattctc 35692057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 39714854 - 39714753
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttgg-tcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  | ||||  ||||||| || |||||| ||||||||||||  |||||||||| |||||||||||  ||||||| |||| |||||    
T  39714854 aacccacttgggttggcatagtggcgttggcttgggatcttgg-agtgtgctcctct-caaggtctcaagtttgattctcctcggtgccgatttcggtgg 39714757  T
Q  148 gcta 151  Q
    ||||    
T  39714756 gcta 39714753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 12259260 - 12259358
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||  | ||| ||||  ||| ||  |||||||||||||||||| | | |||||| ||| ||||||| ||| || ||||||||||||    
T  12259260 aacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctcaccgatgtcaatttgggtgg 12259358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 23471100 - 23471046
Alignment:
Q  110 gtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||| |||||||||||||| ||||||| || |||| |||||||||||||    
T  23471100 gtctcaggttcgattctctccggtgtcaatttgagttggctaatttagcttcttc 23471046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 1600330 - 1600253
Alignment:
Q  87 ttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    ||||||||||||||||||  || || ||||||| ||||||||| |||| |||||||| ||| || | |||||||||||    
T  1600330 ttgggagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttggatggactaacttagcttcttc 1600253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 3799951 - 3800020
Alignment:
Q  94 tgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    ||||||||||| | | || ||||||| |||||||||  |||||||||| |||||||| ||||||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 21392879 - 21392952
Alignment:
Q  91 gagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttcttc 163  Q
    |||||||||||||| |||||||||||||| ||| |||  | |||||| |||| ||||||| ||||| |||||||    
T  21392879 gagtgtgctcctcctcaaggtctcaggttcgatcctcctctgtgccagtttgagtgggctaatttaacttcttc 21392952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 29753700 - 29753741
Alignment:
Q  100 cctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||| |||||||||||||| ||||||||| |||||||||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctggtgccaattt 29753741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 30689011 - 30689104
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||| |||||  ||| |||||||||||| || | ||||||| |||||||||   |||||||| |||  |||||| || ||||||||||    
T  30689011 taacccacttaggttgccctgatggtattggcttaggacctgggagtttgctcctccttgaggtctcatgttcaattctccccagtgccaattt 30689104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 32916871 - 32916777
Alignment:
Q  55 cttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||||||||||| || |||||| ||||||  |  ||||||||||||||| |||||||| |||||| ||| |||  | || |||||||||| |||||    
T  32916871 cttgggttggtctagtagtattgactttggatt--ggagtgtgctcctcctcaaggtcttaggtttaattttctttgatgacaatttgggttggcta 32916777  T

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Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 46146343 - 46146246
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtg 146  Q
    |||||||||||||||||| | ||||||| |||| ||   ||||| |||||||| |  ||| ||||||||||  ||| ||  |||||||||||||||||    
T  46146343 aacccacttgggttggtccgatggtattagcttgggatctgggaatgtgctccccttcaaagtctcaggttcaattttcctcggtgccaatttgggtg 46146246  T

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Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 46607844 - 46607904
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  46607844 ggagtttgctcctcca-aaggtctcaggttcgattccctctggtgccaatttcggtgggcta 46607904  T

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Target: scaffold0172 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 15853 - 15739
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||  ||||| |||||||||||||||| ||  || ||||| ||||||||| |||||||||| |||||||||||  |||||||||||||||||||    
T  15853 aacccacttaagttggcctggtggtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtggg 15754  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  15753 ctaatttagcttctt 15739  T

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Target: scaffold0194 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 13118 - 13021
Alignment:
Q  53 cacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct 150  Q
    ||||| ||||||  |||||||||||||||  |   ||||||||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||    
T  13118 cacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggtgggct 13021  T

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Target: scaffold0517 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 7802 - 7691
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||| ||||||||||||||||||||||||||||  | | ||  |||||||||||||  ||||||||| ||| |||||| |||||||||||||||| |||     
T  7802 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttggatgga 7703  T
Q  149 cta-tttagctt 159  Q
    ||| ||||||||    
T  7702 ctagtttagctt 7691  T

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Target: scaffold0291 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 2546 - 2468
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctc 127  Q
    |||||| ||||||||||| ||||||||||| |||||   ||||||||||||||||| |||||||||||||| |||||||    
T  2546 aacccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

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Target: scaffold0002 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 95044 - 94955
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||||| || ||||||||||||| |  | ||||||||||||||||| ||||||||||||||  ||| |||| |||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattt 94955  T

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Target: scaffold0047 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 15047 - 14949
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||| ||||| || ||||||||| ||   ||||||| ||||||||| |||| ||||||||| |||||||||||| || ||||||||||||    
T  15047 aacccacttgggttagtctgatgctattggcttaggaactgggagtatgctcctcctcaag-tctcaggttcgattctctccggggctaatttgggtggg 14949  T

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Target: scaffold0006 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 18338 - 18413
Alignment:
Q  88 tgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    ||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||   |||||||||||||    
T  18338 tgggattgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttgagtggctaatttagcttcttc 18413  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 163078 - 162993
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    |||||||||||| ||||| ||| |||  | | || ||||||||||||||  ||||||| ||||| |||||||||||||| ||||||    
T  163078 ttgggttggtctagtggttttgacttatgacctgagagtgtgctcctccataaggtctgaggttcgattctctccggtgtcaattt 162993  T

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Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 222554 - 222623
Alignment:
Q  94 tgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    |||| |||||| |||||| ||||||||||||||||  ||| |||||||| ||||   |||||||||||||    
T  222554 tgtgttcctcctcaaggtttcaggtttgattctctttggtaccaatttgagtggctaatttagcttcttc 222623  T

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Target: scaffold0122 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 6988 - 6883
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-attt 154  Q
    ||||||||| || ||||||||||||| || || |||||||||||||||| ||| |||||||||| ||   |||| |||| ||||||| ||||||| ||||    
T  6988 ttgggttggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcga---tctctggtgtcaatttgagtgggctaattt 6892  T
Q  155 agcttcttc 163  Q
    |||||||||    
T  6891 agcttcttc 6883  T

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Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 112282 - 112396
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||||| |||||||||| |    |||||||||| |||||    |||||| ||||| ||||||||||||||||||||| |||||     
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtgga 112381  T
Q  149 ct-atttagcttctt 162  Q
    || ||||||||||||    
T  112382 ctaatttagcttctt 112396  T

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Target: scaffold0126 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 25413 - 25308
Alignment:
Q  59 ggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta-tttagc 157  Q
    |||| |||| |||||||||||||  | ||||||||||||||||| | |||||||||||||| |||| |||| |||| |||||||  || |||| ||||||    
T  25413 ggttcgtctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttgaatgagctattttagc 25314  T
Q  158 ttcttc 163  Q
    ||||||    
T  25313 ttcttc 25308  T

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Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 11534 - 11622
Alignment:
Q  55 cttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    |||||| ||| |||||||||||||||| ||   ||||||||||||||||| | |||||||||||| ||||||||| ||||  |||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaatttgg 11622  T

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Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 41710 - 41594
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||||||||||||| || |||||||||||||  |   || |||| ||||||||| | ||||||||||||  |||||||| | || ||||||||||||    
T  41710 taacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgg 41611  T
Q  148 gct-atttagcttcttc 163  Q
    ||| ||||||| |||||    
T  41610 gctaatttagcctcttc 41594  T

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Target: scaffold0368 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 15000 - 14927
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggct-atttagcttctt 162  Q
    ||||||||||||||| | ||||||||  ||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  15000 ggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagcttctt 14927  T

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Target: scaffold0238 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 2746 - 2694
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  2746 ggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg 2694  T

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Target: scaffold0178 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 6711 - 6631
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctct 128  Q
    |||||||||| ||||| ||| |||||||||| || || |||||||||||| |||||| ||| ||||| |||| ||||||||    
T  6711 taacccacttaggttgatctagtggtattggtttaggacttgggagtgtgttcctcctcaaagtctcgggttcgattctct 6631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 24053 - 24168
Alignment:
Q  49 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtggg 148  Q
    |||||||||||||||| ||  |||||||| ||| || ||| ||||||||||||||  | | || ||||||| |||| |||| | |||||||||| |||||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtggg 24152  T
Q  149 ct-atttagcttcttc 163  Q
    || ||||| |||||||    
T  24153 ctaatttaacttcttc 24168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 43401 - 43306
Alignment:
Q  56 ttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    |||||||||  ||||||||||||||| || |||||||||||| |||| |  ||||||||| ||| ||||| || | ||| |||||||| |||||||    
T  43401 ttgggttggcatggtggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttcgattcccttcagtgtcaatttggatgggcta 43306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 20027 - 19953
Alignment:
Q  60 gttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtg 134  Q
    ||||| || ||||||||||||| |  | ||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtg 19953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 38975 - 38885
Alignment:
Q  52 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttg 142  Q
    |||||||||||||||||||||||||||||| || | | ||||| ||||| ||   ||| ||||| ||| |||| ||||||||| |||||||    
T  38975 ccacttgggttggtctggtggtattggcttgggacctaggagtatgctcatctttaagatctcacgttcgattttctccggtgtcaatttg 38885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 15398 - 15326
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtc-ttgggagtgtgctcctccgcaaggtctcaggtt 119  Q
    |||||||||||||||||||||||||| ||||||| || | || ||||  ||||||||| |||||| |||||||    
T  15398 taacccacttgggttggtctggtggtgttggcttgggacgtttggagcttgctcctcctcaaggtgtcaggtt 15326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 10872 - 10778
Alignment:
Q  68 ggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggctatttagcttcttc 163  Q
    |||| ||||||||| || ||| |||||||||||||||   ||||||||||||  ||| ||||| | |  ||||||||||||| |||||||||||||    
T  10872 ggtgatattggctt-ggacttaggagtgtgctcctccttcaggtctcaggttcaattatctccagggttaatttgggtgggcaatttagcttcttc 10778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 17061 - 17160
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    ||||||| ||||||||||||| |||| ||| ||| ||  ||  ||||||| |||||  |||| | ||||||| ||||||||||| || ||||||||||||    
T  17061 taacccatttgggttggtctgctggtgttgacttgggagtttagagtgtgttcctcttcaagatttcaggttcgattctctccgatgtcaatttgggtgg 17160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 19924 - 19809
Alignment:
Q  48 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgg 147  Q
    |||||||||||  ||||  || |||||||||||| ||   ||||||| |||||||||   |||||||| ||| |||||| |||| ||  |||||||||||    
T  19924 taacccacttgaattggcatgatggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattctttccgatgttaatttgggtgg 19825  T
Q  148 gcta-tttagcttctt 162  Q
    |||| |||||||||||    
T  19824 gctagtttagcttctt 19809  T

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Target: scaffold1367 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 910 - 836
Alignment:
Q  55 cttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctc 129  Q
    |||||| ||| |||||||||||||||| ||   ||||| ||||||||||| | | |||||||||| |||||||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 49328 - 49398
Alignment:
Q  71 ggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaattt 141  Q
    ||||||||||| ||  ||| |||||||||||||  | |||| ||||||| |||||||||||||| ||||||    
T  49328 ggtattggcttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaattt 49398  T

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Target: scaffold0576 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 5245 - 5185
Alignment:
Q  90 ggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgggtgggcta 151  Q
    ||||| |||||||||  ||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  5245 ggagtttgctcctcca-aaggtctcaggttcgattccctctggtgccaatttcggtgggcta 5185  T

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Target: scaffold0244 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 5322 - 5399
Alignment:
Q  67 tggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttggg 144  Q
    |||||||||| |||| || |||||||| ||| |||||| ||| || ||| |||| ||||||  |||||||||||||||    
T  5322 tggtggtattagcttgggacttgggagcgtgttcctcctcaaagtttcaagtttaattctcgtcggtgccaatttggg 5399  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 24911 - 24822
Alignment:
Q  54 acttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcaggtttgattctctccggtgccaatttgg 143  Q
    ||||||||||| |||||||| ||| ||| || | | ||||| ||||||||| ||||||||||| || |||| || | || ||||||||||    
T  24911 acttgggttggcctggtggtgttgacttggggccttggagtttgctcctcctcaaggtctcagattcgattgtccctggagccaatttgg 24822  T

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