View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8986_low_141 (Length: 222)

Name: NF8986_low_141
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8986_low_141
NF8986_low_141
[»] chr7 (42 HSPs)
chr7 (92-203)||(7468058-7468170)
chr7 (3-97)||(4632698-4632792)
chr7 (94-203)||(28240663-28240773)
chr7 (98-203)||(11651340-11651445)
chr7 (96-203)||(15992327-15992435)
chr7 (97-203)||(44377461-44377569)
chr7 (97-203)||(44386328-44386436)
chr7 (86-203)||(27249956-27250075)
chr7 (94-203)||(32042921-32043029)
chr7 (100-203)||(35357455-35357558)
chr7 (94-205)||(21520440-21520550)
chr7 (100-203)||(37746060-37746163)
chr7 (96-203)||(39174262-39174368)
chr7 (20-90)||(4670170-4670240)
chr7 (89-178)||(44378678-44378768)
chr7 (89-178)||(44387545-44387635)
chr7 (85-188)||(27251085-27251190)
chr7 (96-188)||(48989277-48989368)
chr7 (96-179)||(15993746-15993829)
chr7 (82-188)||(39050607-39050714)
chr7 (100-203)||(39049940-39050046)
chr7 (98-171)||(32040953-32041026)
chr7 (97-188)||(44523492-44523582)
chr7 (95-174)||(3628833-3628907)
chr7 (99-171)||(34459195-34459268)
chr7 (97-188)||(37747390-37747481)
chr7 (98-188)||(7469210-7469301)
chr7 (101-188)||(11652445-11652531)
chr7 (97-203)||(11845717-11845821)
chr7 (98-195)||(30917376-30917472)
chr7 (45-97)||(4640576-4640628)
chr7 (98-188)||(28241783-28241874)
chr7 (141-203)||(29674557-29674620)
chr7 (98-156)||(28394999-28395057)
chr7 (95-171)||(34461124-34461202)
chr7 (122-179)||(36710418-36710476)
chr7 (98-193)||(8490806-8490899)
chr7 (97-171)||(26906461-26906537)
chr7 (115-188)||(11847066-11847141)
chr7 (101-188)||(35359255-35359345)
chr7 (95-162)||(29675637-29675706)
chr7 (98-193)||(8517613-8517706)
[»] chr3 (28 HSPs)
chr3 (96-203)||(28039932-28040038)
chr3 (99-203)||(24170599-24170705)
chr3 (98-193)||(23494350-23494445)
chr3 (96-203)||(26165875-26165982)
chr3 (86-188)||(38601325-38601428)
chr3 (95-203)||(18320903-18321013)
chr3 (97-189)||(26167190-26167281)
chr3 (107-203)||(49116400-49116496)
chr3 (97-177)||(5117788-5117868)
chr3 (95-162)||(49116827-49116894)
chr3 (97-189)||(5117363-5117455)
chr3 (97-177)||(39274586-39274667)
chr3 (99-188)||(23495709-23495797)
chr3 (97-184)||(5118772-5118859)
chr3 (98-177)||(7104546-7104623)
chr3 (96-188)||(28038784-28038875)
chr3 (95-181)||(7104638-7104726)
chr3 (98-188)||(24171753-24171845)
chr3 (85-171)||(50563932-50564018)
chr3 (97-184)||(46565259-46565342)
chr3 (85-203)||(38602546-38602661)
chr3 (98-179)||(39273664-39273746)
chr3 (96-188)||(29860711-29860800)
chr3 (99-171)||(39746990-39747059)
chr3 (101-184)||(27988345-27988429)
chr3 (98-173)||(39747153-39747227)
chr3 (130-193)||(55257673-55257736)
chr3 (97-184)||(50564825-50564910)
[»] chr5 (26 HSPs)
chr5 (96-203)||(7121318-7121426)
chr5 (96-203)||(21789547-21789655)
chr5 (96-193)||(3371288-3371386)
chr5 (102-203)||(40721676-40721776)
chr5 (97-203)||(42537018-42537124)
chr5 (98-188)||(3370128-3370220)
chr5 (96-203)||(21715631-21715739)
chr5 (98-188)||(3859759-3859850)
chr5 (98-188)||(40728239-40728331)
chr5 (129-203)||(25641851-25641924)
chr5 (101-178)||(25642705-25642782)
chr5 (106-193)||(294331-294416)
chr5 (97-193)||(7216578-7216674)
chr5 (94-188)||(7006316-7006408)
chr5 (97-177)||(14212382-14212464)
chr5 (97-188)||(7122473-7122565)
chr5 (98-188)||(15839268-15839361)
chr5 (97-188)||(42536143-42536231)
chr5 (122-188)||(21796578-21796643)
chr5 (99-156)||(293067-293124)
chr5 (93-188)||(31795815-31795910)
chr5 (97-203)||(31797015-31797122)
chr5 (153-203)||(3860789-3860839)
chr5 (83-117)||(8368035-8368069)
chr5 (101-175)||(18574749-18574822)
chr5 (96-162)||(22714523-22714589)
[»] chr8 (32 HSPs)
chr8 (97-203)||(44058197-44058304)
chr8 (97-203)||(20164623-20164730)
chr8 (98-203)||(4081821-4081929)
chr8 (98-203)||(4085970-4086078)
chr8 (97-203)||(38982109-38982217)
chr8 (97-203)||(39013206-39013314)
chr8 (96-189)||(9555842-9555934)
chr8 (96-203)||(26169196-26169305)
chr8 (96-203)||(43325006-43325114)
chr8 (89-178)||(20165838-20165928)
chr8 (98-188)||(43323790-43323880)
chr8 (85-203)||(37482256-37482373)
chr8 (97-188)||(26170360-26170453)
chr8 (97-188)||(37483351-37483444)
chr8 (97-188)||(38983246-38983339)
chr8 (97-188)||(39014343-39014436)
chr8 (92-188)||(43827098-43827195)
chr8 (97-188)||(44057140-44057233)
chr8 (98-203)||(9556953-9557059)
chr8 (95-177)||(37871859-37871940)
chr8 (97-180)||(3777353-3777434)
chr8 (99-193)||(14529631-14529722)
chr8 (94-184)||(14530267-14530358)
chr8 (99-162)||(33284378-33284440)
chr8 (98-204)||(37124199-37124305)
chr8 (100-145)||(1178379-1178424)
chr8 (97-179)||(3777125-3777208)
chr8 (99-145)||(1178306-1178352)
chr8 (97-177)||(13163240-13163320)
chr8 (96-156)||(12719085-12719145)
chr8 (98-150)||(30680239-30680291)
chr8 (98-130)||(43828035-43828067)
[»] chr1 (40 HSPs)
chr1 (97-203)||(49762584-49762691)
chr1 (96-203)||(20159220-20159327)
chr1 (95-203)||(22059743-22059850)
chr1 (98-203)||(16829854-16829961)
chr1 (94-203)||(46625742-46625853)
chr1 (97-203)||(7378390-7378496)
chr1 (97-203)||(27902952-27903060)
chr1 (97-188)||(38174064-38174153)
chr1 (98-191)||(27362112-27362207)
chr1 (95-188)||(50961353-50961446)
chr1 (104-203)||(50962626-50962726)
chr1 (96-203)||(10374132-10374241)
chr1 (95-188)||(48643305-48643399)
chr1 (98-188)||(7377355-7377446)
chr1 (99-193)||(48642062-48642155)
chr1 (97-188)||(16831019-16831112)
chr1 (96-203)||(36632210-36632315)
chr1 (98-188)||(49763667-49763759)
chr1 (97-171)||(38132649-38132723)
chr1 (97-177)||(20160396-20160478)
chr1 (96-162)||(22058695-22058761)
chr1 (96-203)||(17865627-17865736)
chr1 (98-188)||(27361384-27361476)
chr1 (98-188)||(27904244-27904335)
chr1 (97-171)||(161686-161759)
chr1 (96-184)||(6668276-6668366)
chr1 (97-188)||(46624603-46624696)
chr1 (105-184)||(9774971-9775048)
chr1 (96-203)||(45459210-45459318)
chr1 (98-188)||(21813802-21813894)
chr1 (99-177)||(32976820-32976897)
chr1 (95-149)||(21796112-21796167)
chr1 (95-203)||(32975570-32975689)
chr1 (129-195)||(6667358-6667424)
chr1 (99-177)||(45459689-45459766)
chr1 (103-184)||(49664349-49664430)
chr1 (97-144)||(17864836-17864884)
chr1 (108-193)||(162763-162847)
chr1 (100-176)||(9775834-9775906)
chr1 (98-176)||(39910648-39910724)
[»] chr4 (42 HSPs)
chr4 (97-203)||(33269466-33269572)
chr4 (94-203)||(46079137-46079246)
chr4 (97-203)||(25437929-25438037)
chr4 (97-202)||(10670328-10670430)
chr4 (97-202)||(10883967-10884069)
chr4 (98-202)||(53552246-53552352)
chr4 (99-203)||(21021178-21021284)
chr4 (96-203)||(34422050-34422159)
chr4 (96-188)||(48183150-48183243)
chr4 (97-203)||(30606024-30606132)
chr4 (102-203)||(23020100-23020203)
chr4 (97-177)||(21075156-21075236)
chr4 (98-203)||(42250138-42250241)
chr4 (96-188)||(40314214-40314307)
chr4 (96-188)||(40324290-40324383)
chr4 (96-188)||(30607158-30607252)
chr4 (92-188)||(48181818-48181916)
chr4 (97-188)||(34423185-34423278)
chr4 (92-172)||(48508283-48508364)
chr4 (99-203)||(2856316-2856420)
chr4 (94-188)||(25439091-25439186)
chr4 (97-203)||(40315333-40315440)
chr4 (97-203)||(40325408-40325515)
chr4 (101-188)||(46577048-46577134)
chr4 (97-203)||(2568154-2568258)
chr4 (95-171)||(4493688-4493766)
chr4 (95-171)||(21077107-21077185)
chr4 (106-188)||(10671469-10671549)
chr4 (106-188)||(10885109-10885189)
chr4 (95-188)||(33268190-33268282)
chr4 (91-188)||(46080508-46080605)
chr4 (147-203)||(21462977-21463033)
chr4 (98-171)||(4499770-4499845)
chr4 (98-188)||(23019001-23019092)
chr4 (87-171)||(1968210-1968293)
chr4 (100-203)||(2713261-2713366)
chr4 (99-179)||(468216-468297)
chr4 (99-188)||(2711976-2712064)
chr4 (96-188)||(21020031-21020125)
chr4 (94-136)||(21464123-21464165)
chr4 (101-162)||(2569107-2569167)
chr4 (18-67)||(18926079-18926128)
[»] scaffold0230 (2 HSPs)
scaffold0230 (95-203)||(18709-18817)
scaffold0230 (99-177)||(6155-6235)
[»] chr6 (26 HSPs)
chr6 (95-203)||(18325538-18325646)
chr6 (97-203)||(34492367-34492474)
chr6 (93-203)||(28189201-28189313)
chr6 (97-203)||(17139766-17139870)
chr6 (122-203)||(28743662-28743743)
chr6 (98-203)||(2404998-2405104)
chr6 (141-203)||(28564246-28564308)
chr6 (96-203)||(19634500-19634608)
chr6 (97-175)||(20400140-20400220)
chr6 (111-203)||(29057411-29057502)
chr6 (97-203)||(17184515-17184621)
chr6 (96-177)||(17183318-17183398)
chr6 (99-203)||(5756349-5756452)
chr6 (104-188)||(3587664-3587746)
chr6 (94-188)||(2403670-2403764)
chr6 (104-203)||(3587012-3587108)
chr6 (98-188)||(28188112-28188203)
chr6 (97-188)||(19635820-19635914)
chr6 (128-203)||(16841028-16841104)
chr6 (96-162)||(17141192-17141258)
chr6 (99-177)||(18586307-18586387)
chr6 (96-188)||(18867217-18867308)
chr6 (97-156)||(995852-995911)
chr6 (90-125)||(7054072-7054107)
chr6 (95-193)||(33198522-33198620)
chr6 (97-188)||(28562774-28562866)
[»] chr2 (17 HSPs)
chr2 (98-203)||(9894495-9894600)
chr2 (97-203)||(15248388-15248496)
chr2 (94-203)||(22285994-22286105)
chr2 (96-203)||(18859071-18859178)
chr2 (99-203)||(25979588-25979691)
chr2 (97-203)||(5202728-5202835)
chr2 (99-203)||(42742799-42742901)
chr2 (98-188)||(15249506-15249597)
chr2 (96-203)||(18695344-18695454)
chr2 (96-188)||(42744074-42744167)
chr2 (96-177)||(10747188-10747270)
chr2 (101-188)||(18748766-18748854)
chr2 (99-188)||(9891657-9891745)
chr2 (100-195)||(34384754-34384851)
chr2 (95-184)||(29099726-29099815)
chr2 (153-203)||(43238490-43238540)
chr2 (101-188)||(43235894-43235977)
[»] scaffold0012 (2 HSPs)
scaffold0012 (98-203)||(53372-53478)
scaffold0012 (100-188)||(54474-54562)
[»] scaffold0013 (2 HSPs)
scaffold0013 (97-185)||(100877-100967)
scaffold0013 (98-188)||(99613-99704)
[»] scaffold0862 (2 HSPs)
scaffold0862 (92-203)||(678-790)
scaffold0862 (97-188)||(2116-2207)
[»] scaffold0287 (1 HSPs)
scaffold0287 (95-174)||(17178-17252)
[»] scaffold0087 (1 HSPs)
scaffold0087 (92-188)||(42083-42182)
[»] scaffold0265 (1 HSPs)
scaffold0265 (98-188)||(18915-19007)
[»] scaffold0606 (1 HSPs)
scaffold0606 (99-193)||(1316-1411)
[»] scaffold0760 (1 HSPs)
scaffold0760 (99-203)||(1273-1377)


Alignment Details
Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 7468058 - 7468170
Alignment:
Q  92 aataaagggttaatatgtctttaccccctataatttgggcgagttccggtttat-cccctgtaaaagaaaaagtttagatttcaaccctataatataaag 190  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||    
T  7468058 aataatgggttaatatgtctttaccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaaaaagtttagattccaaccctataatataaag 7468157  T
Q  191 attatccacaaaa 203  Q
    ||| |||||||||    
T  7468158 attctccacaaaa 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 4632698 - 4632792
Alignment:
Q  3 gaaattttaatcacaacaatacttgatacgggtgagatagatcaatgatttttgatattgatcctacaatattcctatccacataatataataaa 97  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  4632698 gaaattgtaatcacaacaatacttgatacgggtgagatagatcaatggtttttgatattgatcctgcaatattcatatccacataatataataaa 4632792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 28240663 - 28240773
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggtttatccc-ctgtaaaagaaaaagtttagatttcaaccctataatataaagat 192  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  28240663 taaagggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccctctgtaaaaaaaaaagtttagattccaaccctataatataaagat 28240762  T
Q  193 tatccacaaaa 203  Q
    | |||||||||    
T  28240763 tctccacaaaa 28240773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 11651340 - 11651445
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcc 197  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||| |||||| |||    
T  11651340 gggttaatatgtctttaccccctgtaatttgggcgagttccggtttaccccctgtaaaaaaagaagtttagatttcaaccatataatatgaagattctcc 11651439  T
Q  198 acaaaa 203  Q
    ||||||    
T  11651440 acaaaa 11651445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 15992327 - 15992435
Alignment:
Q  96 aagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||     
T  15992327 aagggttaatatgtctttacccccctgtaatttgggcgagttccggtttaccccctgtaaaaataaaagtttagatttcaaccctataatatgaagattc 15992426  T
Q  195 tccacaaaa 203  Q
    | |||||||    
T  15992427 ttcacaaaa 15992435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 44377461 - 44377569
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||     
T  44377461 agggttaatatgtctttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagatttcaaccctataatataaaaattc 44377560  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  44377561 tccacaaaa 44377569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 44386328 - 44386436
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||     
T  44386328 agggttaatatgtctttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagatttcaaccctataatataaaaattc 44386427  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  44386428 tccacaaaa 44386436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 27249956 - 27250075
Alignment:
Q  86 taatataataaagggttaatatgtctttacccc-ctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataa 183  Q
    ||||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||    
T  27249956 taatatattaaagggataatatgtctttaccccgctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataa 27250055  T
Q  184 tataaagattatccacaaaa 203  Q
    |||||||||| |||||||||    
T  27250056 tataaagattctccacaaaa 27250075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 32043029 - 32042921
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||    
T  32043029 taaagggttaatatgtctttaccccctgtaatttggacgagtttcggttta-cccctgtaaaaataaaagtttagatttcaaccctataatatgaagatt 32042931  T
Q  194 atccacaaaa 203  Q
     | |||||||    
T  32042930 cttcacaaaa 32042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 35357455 - 35357558
Alignment:
Q  100 gttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccac 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||  ||||||||||||| |||||| | |||    
T  35357455 gttaatatgtctttaccccctataatttggacgagttccggtttaccccctgtaaaaataaaagtttagattctaaccctataatatgaagattcttcac 35357554  T
Q  200 aaaa 203  Q
    ||||    
T  35357555 aaaa 35357558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 21520440 - 21520550
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||||  |||||||||| |||||| |||||||||||| ||| ||||||||||| ||| |||||||| | |||||||||||||| ||||||    
T  21520440 taaagggttaatatgattttaccccctgtaatttaggcgagttccggcttaccccctgtaaaa-aaacagtttagagtccaaccctataatatgaagatt 21520538  T
Q  194 atccacaaaaat 205  Q
     |||||||||||    
T  21520539 ctccacaaaaat 21520550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 37746060 - 37746163
Alignment:
Q  100 gttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccac 199  Q
    ||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||  ||||||||||||| ||||||||| |||| |||||| | |||    
T  37746060 gttaatatgtcttcaccccctgtaatttggacaagttccggtttatcccctgtaaaaataaaagtttagattccaaccctatcatatgaagattcttcac 37746159  T
Q  200 aaaa 203  Q
    ||||    
T  37746160 aaaa 37746163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 39174262 - 39174368
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||| |||||||||||  ||||||||||||| ||| |||||||||| |||||| |    
T  39174262 aagggttaatatgtctttacccactgtaatttgggcgagttctggttta-cccctgtaaaaataaaagtttagattccaatcctataatatgaagattct 39174360  T
Q  196 ccacaaaa 203  Q
     |||||||    
T  39174361 tcacaaaa 39174368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 4670170 - 4670240
Alignment:
Q  20 aatacttgatacgggtgagatagatcaatgatttttgatattgatcctacaatattcctatccacataata 90  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  4670170 aatacttgatacgggtgagatagatcaatgaattttgatattggtcctgcaatattcctatccacataata 4670240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 44378768 - 44378678
Alignment:
Q  89 tataataaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccc 178  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  44378768 tataataaagggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccc 44378678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 44387635 - 44387545
Alignment:
Q  89 tataataaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccc 178  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  44387635 tataataaagggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccc 44387545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 27251190 - 27251085
Alignment:
Q  85 ataatataataaagggttaatatgtctttaccccc-tataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctata 182  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||| ||    
T  27251190 ataatttaatatagggttaatatgtctttacccccctataatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgta 27251091  T
Q  183 atataa 188  Q
    | ||||    
T  27251090 aaataa 27251085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 48989277 - 48989368
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||| ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  48989277 aagggttaatatgtctttaccccctgtaatttgggcgactttcggtttaccccctgtaaaa-aaaaagtttagattccaaccctgtaaaataa 48989368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 15993829 - 15993746
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccct 179  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||| |||| ||||||||| |||||||    
T  15993829 aagggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaatgtttagattccaaccct 15993746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 39050714 - 39050607
Alignment:
Q  82 cacataatataataaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacccta 180  Q
    ||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||| |||     
T  39050714 cacataataaatttaagggttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaatcctg 39050615  T
Q  181 taatataa 188  Q
    ||| ||||    
T  39050614 taaaataa 39050607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 39049940 - 39050046
Alignment:
Q  100 gttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaa-agtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||||||||||| | |||||| |||||||||||||||  |||| ||||||| |||| |||||||||| ||||||||||||||||||||| ||    
T  39049940 gttaatatgtctttacccccctgtaattttggcgagttccggttttcccccctgtaaaaaaaaaaagtttagattccaaccctataatataaagattctc 39050039  T
Q  197 cacaaaa 203  Q
    |||||||    
T  39050040 cacaaaa 39050046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 32040953 - 32041026
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatt 171  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  32040953 gggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaagtttagatt 32041026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 44523582 - 44523492
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||| |  ||||| |||||||||||||| ||||||| ||| ||||    
T  44523582 agggttaatatgtctttaccccctgtaatttgggcgagttctggtttttcctc-ctaaaaaaaaaagtttagattccaaccctgtaaaataa 44523492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 3628907 - 3628833
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttca 174  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  3628907 aaagggttaatatgtctttatcc--tataatttaggcgagttccggtttatcccctgtaa---aaaaagtttagatttca 3628833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34459195 - 34459268
Alignment:
Q  99 ggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatt 171  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||| |||||||||||| || |||||||||||    
T  34459195 ggttaatatgtctttacccccctgtaatttgggcgagtttcggtttttcccctgtaaaaaaataagtttagatt 34459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 37747481 - 37747390
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatc-ccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||| | ||| |||||| |||||||||||||| ||||||| ||| ||||    
T  37747481 agggttaatatgtatttaccccctgtaatttaggcgagttccggtttacctcccagtaaaa-aaaaagtttagattccaaccctgtaaaataa 37747390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 7469301 - 7469210
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttat-cccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| |||||||||| |||||||| |||||||| |||| | ||||| ||||| |||||||||||||| ||||||| ||| ||||    
T  7469301 gggttaatatgtttttaccccctgtaatttggacgagttccagtttttccccctataaaaaaaaaagtttagattccaaccctgtaaaataa 7469210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 11652531 - 11652445
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||| || ||||||||||||||||||||||||| | ||||||||| |||||  ||||||| ||||||| ||| ||||    
T  11652531 ttaatatgtctttactcc-tataatttgggcgagttccggtttaccgcctgtaaaaaaaaaaaattagattccaaccctgtaaaataa 11652445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 11845717 - 11845821
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||||||||| |||   |||||||||||||||| |||||| ||| |||||||  |||| ||||||||||||||||| ||||| |||||| |     
T  11845717 agggttaatatgtctttatcccag-taatttgggcgagttctggttta-cccttgtaaaaataaaaatttagatttcaaccctacaatatgaagattctt 11845814  T
Q  197 cacaaaa 203  Q
    |||||||    
T  11845815 cacaaaa 11845821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 30917472 - 30917376
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||| ||| | |||| ||||||||||||||| || |||| ||||||||||| |||| ||||||||| ||||||| |||| |||| |||||    
T  30917472 gggttaatatgtttttcctccctgtaatttgggcgagtttcgatttaccccctgtaaaa-aaaaggtttagattccaaccctgtaatttaaaaattat 30917376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 4640576 - 4640628
Alignment:
Q  45 caatgatttttgatattgatcctacaatattcctatccacataatataataaa 97  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  4640576 caatgaattttgatattggtcctgcaatattcctatccacataatataataaa 4640628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 28241874 - 28241783
Alignment:
Q  98 gggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||  ||||||||| ||| |||||||||| | |||||||||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  28241874 gggttaatacatctttaccctcctgtaatttgggcaaattccggttttccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 28241783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 29674557 - 29674620
Alignment:
Q  141 tttatcccctgtaaaagaaaa-agtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||| ||||||||||| |||| |||||||||| ||||||||||||||||||||| |||||||||    
T  29674557 tttaccccctgtaaaaaaaaaaagtttagattccaaccctataatataaagattttccacaaaa 29674620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 28395057 - 28394999
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaa 156  Q
    ||||||||| || |||||||||  ||||||||||||||||||||||| |||||||||||    
T  28395057 gggttaatacgtatttaccccccgtaatttgggcgagttccggtttaccccctgtaaaa 28394999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 34461202 - 34461124
Alignment:
Q  95 aaagggttaatatgtctttaccc-cctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatt 171  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||| |||  ||||||||||| || |||||||||||    
T  34461202 aaagggttaatatgtctttaccttcctgtaatttgggcgagttccggttttcccccctgtaaaaaaataagtttagatt 34461124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 36710476 - 36710418
Alignment:
Q  122 taatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccct 179  Q
    ||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||    
T  36710476 taatttgggcgagttccggattactcccctgtaaaaaataaagtttagatttcaaccct 36710418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 8490899 - 8490806
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||| ||||||||  | |||||||||||||||||||||||  |||  || || |||||||||||||| ||||||| |||| | ||||||    
T  8490899 gggttaatatgcctttaccctatgtaatttgggcgagttccggtttactccc--tagaaaaaaaagtttagattccaaccctgtaatttgaagatt 8490806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 26906537 - 26906461
Alignment:
Q  97 agggttaatatgtcttta-ccccctataatttgggcgagttccggtttatcccctgt-aaaagaaaaagtttagatt 171  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||  || |||| |||| ||||||||||||||    
T  26906537 agggttaatatgtctttatccccctgtaatttgggcgagttccgattttccctctgtaaaaaaaaaaagtttagatt 26906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 11847141 - 11847066
Alignment:
Q  115 ccccctataatttgggcgagttccggttta-tcccctgt-aaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||| |||||| ||||||||||||||||  ||||||| |||| |||||||||||||| ||||||| ||| ||||    
T  11847141 ccccctgtaatttaggcgagttccggtttacccccctgtaaaaaaaaaaagtttagattccaaccctgtaaaataa 11847066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 35359345 - 35359255
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttat-cccctgtaaaa--gaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||| ||||||||   |||||| ||||||||||||||||| |||||||||||   ||| |||||||||| ||||||| ||| ||||    
T  35359345 ttaatatgtatttacccctcttaatttaggcgagttccggtttatccccctgtaaaaacaaaagagtttagattccaaccctgtaaaataa 35359255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 29675706 - 29675637
Alignment:
Q  95 aaagggttaatatgtctttaccc-cctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaa 162  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||| || ||| |||||||||||| |||||    
T  29675706 aaagggttaatatgtttttaccctcctgtaatttgggcgaattctggttttctcccctgtaaaaaaaaaa 29675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 8517706 - 8517613
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||| ||||||||  | ||||||||||| |||||||||||  |||  || || |||||||| ||||| ||||||| |||| | ||||||    
T  8517706 gggttaatatgcctttaccctatgtaatttgggcgcgttccggtttactccc--tagaaaaaaaagttcagattccaaccctgtaatttgaagatt 8517613  T

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Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 28040038 - 28039932
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||| |    
T  28040038 aagggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccctgtaaaa-aaaaagtttagattccaaccctataatataaagattct 28039940  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  28039939 ccacaaaa 28039932  T

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Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 24170599 - 24170705
Alignment:
Q  99 ggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||| ||    
T  24170599 ggttaatatgtttttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 24170698  T
Q  197 cacaaaa 203  Q
    |||||||    
T  24170699 cacaaaa 24170705  T

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Target: chr3; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 23494350 - 23494445
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||||  ||||||||||||| ||||||| |||||| ||||||    
T  23494350 gggttaatatgtctttaccccctgtaatttgggcgagtttcggtttacctcctgtaaaaataaaagtttagattccaaccctttaatatgaagatt 23494445  T

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Target: chr3; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 26165875 - 26165982
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||  ||| ||||||||| ||| |||||||||| || ||| |    
T  26165875 aagggttaatatgtctttaccccctataatttgggcgagttccgatttacctcctgtaaaaataaatgtttagattccaatcctataatatgaacattct 26165974  T
Q  196 ccacaaaa 203  Q
     |||||||    
T  26165975 tcacaaaa 26165982  T

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Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 38601325 - 38601428
Alignment:
Q  86 taatataataaagggttaatatgtctttac-cccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    |||||| ||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||||  ||||||||||||| ||||||| |||     
T  38601325 taatattataaagggttaatatgtctttacacccctataatttcgacgagttccggtttaccccctgtaaaaataaaagtttagattccaaccctgtaaa 38601424  T
Q  185 ataa 188  Q
    ||||    
T  38601425 ataa 38601428  T

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Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 18321013 - 18320903
Alignment:
Q  95 aaagggttaatatgtctttac-cccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagat 192  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||| |||| |||||||  ||||||||||||| ||||||||||||||||| ||    
T  18321013 aaagggttaatatgtctttactcccctgcaatttgggcgagttccggtttaaccccctgtaaaaataaaagtttagattccaaccctataatataaaaat 18320914  T
Q  193 tatccacaaaa 203  Q
    | | |||||||    
T  18320913 tcttcacaaaa 18320903  T

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Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 26167281 - 26167190
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaa 189  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||| |||||||||||||| ||||||| ||| |||||    
T  26167281 agggttaatatgtctttaccccctgtaatttaggcgaattccggtttaccccctgtaaaa-aaaaagtttagattccaaccctgtaaaataaa 26167190  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 49116400 - 49116496
Alignment:
Q  107 tgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||||||||||||| |||||| ||||||||||||||||  ||||||||||| |||||||||||||| | |||||||||||| |||||| |||||||||    
T  49116400 tgtctttaccccctgtaatttaggcgagttccggtttacacccctgtaaaaaaaaaagtttagattac-accctataatatgaagattctccacaaaa 49116496  T

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Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 5117788 - 5117868
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||  | |||||||| || |||||||||||||||||    
T  5117788 agggttaatatgtctttaccccctgtaatttaggcgagttccggtttactctctgtaaaaaaataagtttagatttcaacc 5117868  T

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Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 49116894 - 49116827
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa 162  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||    
T  49116894 aaagggttaatatgtctttaccccctgtaatttgagcgagttccggtttaccccctgtaaaaaaaaaa 49116827  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 5117363 - 5117455
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaa 189  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||| |||| ||||||| |||||||||||||| ||||||| |||| ||||    
T  5117363 agggttaatatgtctttaccccctgtaatttgggtgagttccagtttacccccttgtaaaa-aaaaagtttagattccaaccctgtaatttaaa 5117455  T

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Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 39274667 - 39274586
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatccc-ctgtaaaagaaaaagtttagatttcaacc 177  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||    
T  39274667 agggttaatatgtctttagtccctgtaatttgggcgagttccggtttacccctctgtaaaaaaaaaagtttagattccaacc 39274586  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 23495797 - 23495709
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||| |||||||||| |||||| |||||||| ||||||| ||||||||||| |||||| ||||||| ||||||| ||| ||||    
T  23495797 ggttaatatgtatttaccccctgtaatttaggcgagtttcggtttaccccctgtaaaa-aaaaagattagattccaaccctgtaaaataa 23495709  T

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Target: chr3; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 5118859 - 5118772
Alignment:
Q  97 agggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||||||||| ||||||| ||| |||||| || ||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  5118859 agggttaatatgtttttaccctcctgtaatttaggtgagttccggtttaccccctgtaaaa-aaaaagtttagattccaaccctgtaat 5118772  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 7104546 - 7104623
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||| ||||||||||| ||| | ||||||||||||||    
T  7104546 gggttaatatgtctttacccc-tgtaatttgggcgagttccgg-ttaccccctgtaaaaaaaataatttagatttcaacc 7104623  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 28038784 - 28038875
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatc-ccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||||  | |||||||||| |||||||||||||| ||||||| ||| ||||    
T  28038784 aagggttaatatgtcttta-cccctgtaatttgggcgagtttcggttttcctccctgtaaaa-aaaaagtttagattccaaccctgtaaaataa 28038875  T

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Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 7104726 - 7104638
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccgg-tttatcccctgt-aaaagaaaaagtttagatttcaaccctat 181  Q
    ||||||||||||||||||||| |||| |||||||| | |||||||| |||  ||||||| |||| |||||||||||||| |||||||||    
T  7104726 aaagggttaatatgtctttacaccctgtaatttggacaagttccggttttcccccctgtaaaaaaaaaaagtttagattccaaccctat 7104638  T

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Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 24171845 - 24171753
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| ||||||||| | |||||||||||||||| |||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  24171845 gggttaatatgtttttacccccctgtaatttgggcgagttctggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 24171753  T

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Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 50563932 - 50564018
Alignment:
Q  85 ataatataataaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatt 171  Q
    |||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||||||   | | ||||| | ||||||||||||||    
T  50563932 ataataaaatatagggttaatatgtctttaccacctgtaatttaggcgagttccggttaccctcatgtaacaaaaaaagtttagatt 50564018  T

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Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 46565259 - 46565342
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||||||||| |||||||| ||||||||||| |||||||| |||| ||||||||||| ||||   ||||||| ||||||| ||||    
T  46565259 agggttaatatgtttttaccccttataatttgggtgagttccgattta-cccctgtaaaaaaaaa---ttagattccaaccctgtaat 46565342  T

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Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 38602661 - 38602546
Alignment:
Q  85 ataatataataa-agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataa 183  Q
    ||||||| |||| |||||||||| ||||||||||| | |||||| ||||||||||| |||| ||||| |||||  ||||||||||||| ||| | |||||    
T  38602661 ataatattataatagggttaata-gtctttacccc-tgtaatttaggcgagttccgatttaccccctctaaaa--aaaagtttagattccaatcttataa 38602566  T
Q  184 tataaagattatccacaaaa 203  Q
    ||  |||||| |||||||||    
T  38602565 tacgaagattctccacaaaa 38602546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 39273664 - 39273746
Alignment:
Q  98 gggttaatatgtctttac-cccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccct 179  Q
    |||||||||||| ||||  ||||| |||||||||||| |||| ||||| | ||||||||| ||  ||||||||||||||||||    
T  39273664 gggttaatatgtttttagtcccctgtaatttgggcgaattccagtttacctcctgtaaaaaaatcagtttagatttcaaccct 39273746  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 29860800 - 29860711
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||| || | ||||| ||||||||||||||| || |||||||| ||||||  |||||||||||||| ||| ||| ||| ||||    
T  29860800 aagggttaatatgtatt-atcccctgtaatttgggcgagtttcgatttatcccttgtaaa--aaaaagtttagattccaatcctgtaaaataa 29860711  T

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Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 39746990 - 39747059
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatt 171  Q
    |||||||||||||||| | ||||||||||| |||||||||| |||||  ||||||||  ||||||||||||||    
T  39746990 ggttaatatgtctttatctcctataatttgagcgagttccgatttat-tcctgtaaa--aaaaagtttagatt 39747059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 27988345 - 27988429
Alignment:
Q  101 ttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||||||||||  ||| | ||||||||  |||||||| |||| ||||||||||| ||||| |||||||| ||||||| ||||    
T  27988345 ttaatatgtctttattcccatgtaatttggatgagttccgatttaccccctgtaaaaaaaaaaatttagattccaaccctgtaat 27988429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 39747227 - 39747153
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatc-ccctgtaaaagaaaaagtttagatttc 173  Q
    |||||||||| | |||||||| | |||||||||||||||| |||||||| |||||||||| | ||||||||||||||    
T  39747227 gggttaatatatttttacccc-tgtaatttgggcgagttctggtttatctccctgtaaaa-acaaagtttagatttc 39747153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 55257673 - 55257736
Alignment:
Q  130 gcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||| |||||||||| ||||||||||| |||  ||||||||| |||||||||||| | ||||||    
T  55257673 gcgatttccggtttaccccctgtaaaaaaaattgtttagattccaaccctataatttgaagatt 55257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 50564910 - 50564825
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||||||||||||||||||| | | |||| |||||||| ||||||| || |||||||  ||||||||| |||| |||| |||||||    
T  50564910 agggttaatatgtctttacccccttgtcatttaggcgagtttcggttta-cctctgtaaa--aaaaagtttggattccaactctataat 50564825  T

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Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 7121318 - 7121426
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  7121318 aagggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 7121417  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  7121418 tccacaaaa 7121426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 21789547 - 21789655
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttat-cccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||||||||     
T  21789547 aagggttaatatgtctttaccccctgtaatttaggcgagttccggtttttccccctgtaaaaaaaaaagtttagattccaaccctgtaatataaagattc 21789646  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  21789647 tccacaaaa 21789655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 3371386 - 3371288
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||| |||||||||||||| |||||||||||||||||||||    
T  3371386 aagggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagatt 3371288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 40721676 - 40721776
Alignment:
Q  102 taatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaa 201  Q
    ||||||||||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    
T  40721676 taatatgtctttacccc-tgtaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattcttcacaa 40721774  T
Q  202 aa 203  Q
    ||    
T  40721775 aa 40721776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 42537124 - 42537018
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa-gtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||||||||||||  | |||||||||||||||||||||| || ||||||||| ||||| ||||||||| |||||||||||||| |||||| |    
T  42537124 agggttaatatgtctttacccattgtaatttgggcgagttccggttt-tctcctgtaaaaaaaaaaagtttagattccaaccctataatatgaagattct 42537026  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  42537025 ccacaaaa 42537018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 3370128 - 3370220
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||| ||||    
T  3370128 gggttaatatgtctttacccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaaaaagtttagatttcaaccctgtaaaataa 3370220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 21715631 - 21715739
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||| ||||||||||||| || |||||| || |||||||||||| ||||| ||||||| ||||| |||||||| ||||||| |||||||||||||     
T  21715631 aagggttactatgtctttaccctctgtaatttaggtgagttccggtttttccccctgtaaaaaaaaaaatttagattccaaccctgtaatataaagattc 21715730  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  21715731 tccacaaaa 21715739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 3859759 - 3859850
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||| ||| ||||    
T  3859759 gggttaatatgtgtttacccccctgtaatttgggcgagttccggtttaccccctgtaaaaaaaaaagtttagattcgaaccctgtaaaataa 3859850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 40728331 - 40728239
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  40728331 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctttaaaataa 40728239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 25641851 - 25641924
Alignment:
Q  129 ggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||||    
T  25641851 ggcgagtttcggtttaccccctgtaaaa-aaaaagtttagattccaaccctataatatgaagattctccacaaaa 25641924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 25642782 - 25642705
Alignment:
Q  101 ttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccc 178  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  25642782 ttaatatgtctttacccccctgtaatttgggcgagttccggtttatcccctataaaa-aaaacgtttagattccaaccc 25642705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 294416 - 294331
Alignment:
Q  106 atgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||  ||||||||||||| |||||||| |||| | ||||||    
T  294416 atgtctttaccccctgtaatttgtgcgagtttcggtttaccccctgtaaa--aaaaagtttagatctcaaccctgtaatttgaagatt 294331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 7216674 - 7216578
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||||||||   | | ||||||||||||||||||||||| | ||| ||||| |||||||||||||| ||||||| |||| | ||||||    
T  7216674 agggttaatatgtctttatttcttgtaatttgggcgagttccggtttacctcctataaaataaaaagtttagattccaaccctgtaatttgaagatt 7216578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 7006408 - 7006316
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| | |||| ||||||||||| ||| |  ||||||||||||||| ||| ||||    
T  7006408 taaagggttaatatgtcttta-cccctgtaatttgggcgagttctgattta-cccctgtaaaaaaaataaattagatttcaaccctgtaaaataa 7006316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 14212382 - 14212464
Alignment:
Q  97 agggttaatatgtcttta-ccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||||| |||||| ||||||||| ||||| ||||||| |||| ||||||| |||||||||||||| |||||    
T  14212382 agggttaatatgtctttagccccctgtaatttgggtgagtttcggtttagccccctgtaaaaaaaaaagtttagattccaacc 14212464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 7122565 - 7122473
Alignment:
Q  97 agggttaatatgtctttacc-ccctataatttgggcgagttccggtttatcccctgta-aaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||||  || ||| |||||||||||||| ||||||| ||| ||||    
T  7122565 agggttaatatgtctttacctccctgtaatttgggcgagttccggttt-tcccccctataaaaaaaaagtttagattccaaccctgtaaaataa 7122473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 15839361 - 15839268
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggttta-tcccctgt-aaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| ||||||||| | |||||| ||||||||||||||||  ||||||| |||| |||||||||||||| ||||||| ||| ||||    
T  15839361 gggttaatatgtatttacccccctttaatttaggcgagttccggtttacccccctgtaaaaaaaaaaagtttagattccaaccctgtaaaataa 15839268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 42536143 - 42536231
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||| |||||||| ||||| |||||||| |||||| |||||| || |||||||||   |||||||||||| ||||||| ||| ||||    
T  42536143 agggttaatgtgtctttatcccctgtaatttggacgagtttcggtttttctcctgtaaaa---aaagtttagattccaaccctgtaaaataa 42536231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 21796643 - 21796578
Alignment:
Q  122 taatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||  |||||||||||| |||||||||||| |||||||||||||| ||||||| ||| ||||    
T  21796643 taatttggaagagttccggtttttcccctgtaaaa-aaaaagtttagattccaaccctgtaaaataa 21796578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 293067 - 293124
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaa 156  Q
    ||||||||||| |||||||||| |||||| |||||||||| |||||||  ||||||||    
T  293067 ggttaatatgtttttaccccctctaatttaggcgagttccagtttatctactgtaaaa 293124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 31795815 - 31795910
Alignment:
Q  93 ataaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaa-agtttagatttcaaccctataatataa 188  Q
    ||||||||||| ||||| |||||||| | |||||||||||||||  ||||| || | ||||||| |||| |||||||||| ||||||| ||| ||||    
T  31795815 ataaagggttagtatgtttttacccc-tgtaatttgggcgagttttggtttttctcttgtaaaaaaaaaaagtttagattccaaccctgtaaaataa 31795910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 31797122 - 31797015
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccct-gtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||| | |||||  ||  ||||||| ||||||||||||||| || || |||||| |||||  ||| ||| ||| || |||||||||||||| |    
T  31797122 agggttaatatatttttacgtccggtaatttgtgcgagttccggtttaccctcttgtaaaaaaaaaaaattaaattccaatcccataatataaagattct 31797023  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  31797022 ccacaaaa 31797015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 3860839 - 3860789
Alignment:
Q  153 aaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||| ||||||||||||||| || |||||||||| |||||| |||||||||    
T  3860839 aaaaaaaaaagtttagattttaatcctataatatgaagattttccacaaaa 3860789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 8368069 - 8368035
Alignment:
Q  83 acataatataataaagggttaatatgtctttaccc 117  Q
    |||||||||||||||||||||||| ||||||||||    
T  8368069 acataatataataaagggttaataggtctttaccc 8368035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 18574749 - 18574822
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaa 175  Q
    |||||||||||||| | | | |||||||||||||||||| |||| ||| | ||||| |||||||||| |||||||    
T  18574749 ttaatatgtctttatcacttgtaatttgggcgagttccgattta-cccttataaaaaaaaaagtttaaatttcaa 18574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 22714589 - 22714523
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa 162  Q
    ||||||||||||||  ||||||||| ||| ||||||||||| | ||||| || |||||||| |||||    
T  22714589 aagggttaatatgtacttaccccctgtaaattgggcgagttacagtttaccctctgtaaaaaaaaaa 22714523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 44058304 - 44058197
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||| |    
T  44058304 agggttaatatgtctttacctcctgtaatttgggcgagttccggtttcctcccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 44058205  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  44058204 ccacaaaa 44058197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 20164623 - 20164730
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||     
T  20164623 agggttaatatgtctttacccccctgtaatttgggcgagttccggtttacccccctgtaaaa-aaaaagtttagatttcaaccctataatataaaaattc 20164721  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  20164722 tccacaaaa 20164730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 4081929 - 4081821
Alignment:
Q  98 gggttaatatgtctttaccccctat--aatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  4081929 gggttaatatgtctttaccccctctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 4081830  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  4081829 tccacaaaa 4081821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 4086078 - 4085970
Alignment:
Q  98 gggttaatatgtctttaccccctat--aatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  4086078 gggttaatatgtctttaccccctctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 4085979  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  4085978 tccacaaaa 4085970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 38982109 - 38982217
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  38982109 agggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 38982208  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  38982209 tccacaaaa 38982217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 39013206 - 39013314
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  39013206 agggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 39013305  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  39013306 tccacaaaa 39013314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 9555842 - 9555934
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaa 189  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||| ||| |||||    
T  9555842 aagggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccctgtaaaa-aaaaagtttagattccaaccctgtaaaataaa 9555934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 26169196 - 26169305
Alignment:
Q  96 aagggttaatatgtctttac-cccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  26169196 aagggttaatatgtctttattcccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagatt 26169295  T
Q  194 atccacaaaa 203  Q
     || ||||||    
T  26169296 ctctacaaaa 26169305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 43325114 - 43325006
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcc-cctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||| || |||||||||  ||||||||||||| |||||||||||||| ||||||     
T  43325114 aagggttaatatgtctttaccccctgtaatttgagtgagttccggtttacccacctgtaaaaataaaagtttagattccaaccctataatatgaagattc 43325015  T
Q  195 tccacaaaa 203  Q
    | |||||||    
T  43325014 ttcacaaaa 43325006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 20165928 - 20165838
Alignment:
Q  89 tataataaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccc 178  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  20165928 tataataaagggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccc 20165838  T

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Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 43323790 - 43323880
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  43323790 gggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 43323880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 37482256 - 37482373
Alignment:
Q  85 ataatataataaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    |||||| ||| || |||||||||||||||| ||| | |||||| ||||||||| |||||||||| ||||||| ||| |||||||||| ||||| ||||||    
T  37482256 ataataaaatgaatggttaatatgtctttatcccttgtaatttaggcgagttctggtttatcccttgtaaaa-aaagagtttagattccaaccttataat 37482354  T
Q  185 ataaagattatccacaaaa 203  Q
    || |||||| |||||||||    
T  37482355 atgaagattctccacaaaa 37482373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 26170453 - 26170360
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggttt--atcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  26170453 agggttaatatgtctttaccccctgtaatttaggcgagttccggttttccccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 26170360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 37483444 - 37483351
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgt--aaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||| |||||||  |||| |||||||||||||| ||||||| ||| ||||    
T  37483444 agggttaatatgtctttaccccctgtaatttggacgagttctggtttaccccctgtaaaaaaaaaaaagtttagattccaaccctgtaaaataa 37483351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 38983339 - 38983246
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  38983339 agggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 38983246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 39014436 - 39014343
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  39014436 agggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 39014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 43827098 - 43827195
Alignment:
Q  92 aataaagggttaatatgtcttta-ccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||| |||||||||||||||||| |||||| |||||||||| ||||||| |||| |||| ||||||| |||||||||||||| ||||||||||| ||||    
T  43827098 aatatagggttaatatgtctttatccccctgtaatttgggcaagttccgatttaaccccctgtaaaa-aaaaagtttagattccaaccctataaaataa 43827195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 44057140 - 44057233
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  44057140 agggttaatatgtatttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 44057233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 9557059 - 9556953
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatc-ccctgtaaaagaaaaag-tttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||||||| ||| | |||||||| |||||| ||||||  | |||||||||| |||||  |||||||| ||||||||||||||||||||| |    
T  9557059 gggttaatatgtctttatccc-tgtaatttggacgagtttcggttttcctccctgtaaaaaaaaaaaatttagattccaaccctataatataaagattct 9556961  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  9556960 ccacaaaa 9556953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 37871940 - 37871859
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    ||||||||| |||||||||| ||| | ||||||||| ||||||||||||||||  ||||||| ||| |||||| |||||||||    
T  37871940 aaagggttagtatgtctttagccc-tgtaatttgggtgagttccggtttatcctttgtaaaaaaaatagtttaaatttcaacc 37871859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 3777434 - 3777353
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacccta 180  Q
    |||||||||||||||||||| ||| |||||||| ||| ||||||||||| ||||  ||||  ||||||||||||| ||||||||    
T  3777434 agggttaatatgtctttacctcct-taatttggacgaattccggtttat-cccttaaaaaataaaagtttagattccaacccta 3777353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 14529631 - 14529722
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||||||||| | |||||||||||||||||| |||| |||  |||||  ||||| |||||||| ||||||| |||| | ||||||    
T  14529631 ggttaatatgtctttaccccatgtaatttgggcgagttccgattta-ccctcgtaaa--aaaaaatttagattccaaccctgtaatttgaagatt 14529722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 14530358 - 14530267
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    |||||||||||||| ||||||||  || ||||||||||||||| |||||||  || ||||||||  ||||||||| ||| |||| |||||||    
T  14530358 taaagggttaatatatctttaccgtctgtaatttgggcgagtttcggtttacacctctgtaaaaataaaagtttacattccaactctataat 14530267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 33284378 - 33284440
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa 162  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||| || |||||||| |||||    
T  33284378 ggttaatatgtctttacccc-tgtaatttgggcgagtttcggtttaccctctgtaaaaaaaaaa 33284440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 37124199 - 37124305
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaa-agtttagatttcaaccctataatataaagattatc 196  Q
    ||||||||||||||||||||| | |||||||||||| |||| ||||||||  ||||||| ||||  ||||||||| ||||| || || || |||||| ||    
T  37124199 gggttaatatgtctttacccc-tgtaatttgggcgaattccagtttatcctatgtaaaaaaaaattgtttagattccaaccttaaaaaatgaagattctc 37124297  T
Q  197 cacaaaaa 204  Q
    || |||||    
T  37124298 caaaaaaa 37124305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 1178424 - 1178379
Alignment:
Q  100 gttaatatgtctttaccccctataatttgggcgagttccggtttat 145  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  1178424 gttaacatgtctttaccccctgtaatttgggcgagtttcggtttat 1178379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 3777125 - 3777208
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatccc--ctgtaaaagaaaaagtttagatttcaaccct 179  Q
    ||||||||||||| |||||||| | |||||| | |||||||||||||| |||  || ||||| |||||||||||||| |||||||    
T  3777125 agggttaatatgtatttacccc-tgtaatttagacgagttccggtttacccctcctataaaaaaaaaagtttagattccaaccct 3777208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 1178306 - 1178352
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttat 145  Q
    |||||||||||||||| ||||| |||| || ||||||||||||||||    
T  1178306 ggttaatatgtctttatcccctgtaatatgagcgagttccggtttat 1178352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 13163240 - 13163320
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttat-cccctgtaaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||||| ||||| || ||| || |||||||||||||| ||||||||||| ||   ||||||||| |||||    
T  13163240 agggttaatatgtcttta-cccctgtattttaggtgagttccggtttatccccctgtaaaaaaatttgtttagattccaacc 13163320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 12719085 - 12719145
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaa 156  Q
    |||||||||||   |||||||||||||||| |  || | ||||||||||||||||||||||    
T  12719085 aagggttaatagtgctttaccccctataatatacgctatttccggtttatcccctgtaaaa 12719145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 30680239 - 30680291
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccct 150  Q
    |||||||||||||| || ||| | ||||||||||||||||| ||||| |||||    
T  30680239 gggttaatatgtctctatcccatgtaatttgggcgagttccagtttaccccct 30680291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 43828067 - 43828035
Alignment:
Q  98 gggttaatatgtctttaccccctataatttggg 130  Q
    ||||||||||||||||||||||| |||||||||    
T  43828067 gggttaatatgtctttaccccctctaatttggg 43828035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 49762584 - 49762691
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatccc-ctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||| |||||||||||||| ||||||||||||||||||||| |    
T  49762584 agggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccgctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 49762683  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  49762684 ccacaaaa 49762691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 20159220 - 20159327
Alignment:
Q  96 aagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||||     
T  20159220 aagggttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaa-aaaaagtttagattccaaccctataatataaagattc 20159318  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  20159319 tccacaaaa 20159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 22059850 - 22059743
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||||     
T  22059850 aaagggttaatatgtctttaccccctgtaatttgggtgagttccgatttaccccctgtaaaa-aaaaagtttagattccaaccctataatatgaagattc 22059752  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  22059751 tccacaaaa 22059743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 16829854 - 16829961
Alignment:
Q  98 gggttaatatgtctttacc-ccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||||||||||||||||| |    
T  16829854 gggttaatatgtctttacctccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 16829953  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  16829954 ccacaaaa 16829961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 46625853 - 46625742
Alignment:
Q  94 taaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaaga 191  Q
    |||||||||||||||||||||||||| | |||||||||||||||||| |||  |||| ||||||| |||||||||||||| |||||||||||||||||||    
T  46625853 taaagggttaatatgtctttacccccctgtaatttgggcgagttccgattttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaaga 46625754  T
Q  192 ttatccacaaaa 203  Q
    || |||||||||    
T  46625753 ttctccacaaaa 46625742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 7378496 - 7378390
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||| ||||||||| | |||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |    
T  7378496 agggttaatatgtatttacccccctctaatttggacgagttctggttta-cccctgtaaaaaaaaaagtttagatttcaaccctataatatgaagattct 7378398  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  7378397 ccacaaaa 7378390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 27902952 - 27903060
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||  ||||||||||||| |||||||||||||| ||||||     
T  27902952 agggttaatatgtctttacccccctttaatttgggcgagttccggtttacccccctgtaaaaataaaagtttagattccaaccctataatatgaagattc 27903051  T
Q  195 tccacaaaa 203  Q
    | |||||||    
T  27903052 ttcacaaaa 27903060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 38174064 - 38174153
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||    
T  38174064 agggttaatatgtctttacctcctgtaacttgggcgagttccggtttaccccctgtaaa--aaaaagtttagatttcaaccctataaaataa 38174153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 27362207 - 27362112
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaaga 191  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||    
T  27362207 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaaga 27362112  T

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Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 50961353 - 50961446
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||| |||||||||| |||||| || ||||||||||||| ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  50961353 aaagggttaatatgtatttaccccctgtaatttaggggagttccggtttaccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 50961446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 50962726 - 50962626
Alignment:
Q  104 atatgtctttaccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaa 202  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||  ||||||||||||| |||||||||||||| |||||| | ||||||    
T  50962726 atatgtctttaccccctgtaatttgggcgagatccggtttacccccctgtaaaaataaaagtttagattccaaccctataatatgaagattcttcacaaa 50962627  T
Q  203 a 203  Q
    |    
T  50962626 a 50962626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 10374132 - 10374241
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggttta--tcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||||||||| ||||| |||||||||||||||| ||||||   |||||||||||   |||||||||||||||| |||||||||| ||||||    
T  10374132 aagggttaatatgtctttaacccctgtaatttgggcgagttctggtttaccccccctgtaaaaatgaaagtttagatttcaatcctataatatgaagatt 10374231  T
Q  194 atccacaaaa 203  Q
     | |||||||    
T  10374232 cttcacaaaa 10374241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 48643399 - 48643305
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgt-aaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||| |||| |||||||||||||| ||||||| ||| ||||    
T  48643399 aaagggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaaagtttagattccaaccctgtaaaataa 48643305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 7377355 - 7377446
Alignment:
Q  98 gggttaatatgtcttt-accccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||| ||||||| ||||||  ||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||| ||||    
T  7377355 gggttaatatgtcttttaccccctttaatttaagcgagttccagtttatctcctgtaaaaaaaaaagtttagattccaaccctataaaataa 7377446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 48642062 - 48642155
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||||||||| | |||||||  |||||| ||||||| ||||| |||||  ||||||||||||| |||||||||||||||||||||    
T  48642062 ggttaatatgtctttacccc-tgtaatttgatcgagtttcggtttaccccctataaaaataaaagtttagattccaaccctataatataaagatt 48642155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 16831112 - 16831019
Alignment:
Q  97 agggttaatatgtctttacccccta-taatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  16831112 agggttaatatgtctttacccccttgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 16831019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 36632315 - 36632210
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||  |||| |||||  ||||||||||||| ||||| ||||| || |||||| |    
T  36632315 aagggttaatatgtctttaccc--tgtaatttgggcgagttccggtttactccctataaaaataaaagtttagattccaaccatataacatgaagattct 36632218  T
Q  196 ccacaaaa 203  Q
     |||||||    
T  36632217 tcacaaaa 36632210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 49763759 - 49763667
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  49763759 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 49763667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 38132723 - 38132649
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatt 171  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||  ||||| ||||||||||||||    
T  38132723 agggttaatatgtctttaccccctgtaatttgggcgagttccggtttattccccaataaaa-aaaaagtttagatt 38132649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 20160478 - 20160396
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||  ||||||||||| |||||||||||||| |||||    
T  20160478 agggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 20160396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 22058695 - 22058761
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa 162  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||| |||||    
T  22058695 aagggttaatatgtctttaccccctgtaatttgggcgagtttcggtttaccccttgtaaaaaaaaaa 22058761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 17865736 - 17865627
Alignment:
Q  96 aagggttaatatgtctttac-cccctataatttgggcgagttccggtttatcccctgtaaaagaaaa-agtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||  |||||||||  |||| |  || |||||||||    
T  17865736 aagggttaatatgtatttactcccctgtaatttgggcgagttccggtttaccccctgtaaaaaaaaattgtttagattctaaccttgaaaaataaagatt 17865637  T
Q  194 atccacaaaa 203  Q
     |||||||||    
T  17865636 ctccacaaaa 17865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 27361384 - 27361476
Alignment:
Q  98 gggttaatatgtctttac-cccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||| ||||| |||||||||||||||||| |||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  27361384 gggttaatatgtctttactcccctgtaatttgggcgagttccgattttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 27361476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 27904335 - 27904244
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| ||||||||| | |||||| || |||||||| |||| ||||||||||| |||||||||| ||| ||||||||||| ||||    
T  27904335 gggttaatatgtatttacccccctgtaatttaggtgagttccgatttaccccctgtaaaaaaaaaagtttaaattccaaccctataaaataa 27904244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 161686 - 161759
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatt 171  Q
    |||||||||||||||||| ||| | |||||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  161686 agggttaatatgtctttatcccttgtaatttagacgagtttcggtttatcccctgtaaaa-aaaaagtttagatt 161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 6668366 - 6668276
Alignment:
Q  96 aagggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||||| |||||  ||||||| ||||||| ||||    
T  6668366 aagggttaatatgtctttagccacctgtaatttgggcgagttccggtttacccccttgtaaaaaaaaaaacttagattccaaccctgtaat 6668276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 46624603 - 46624696
Alignment:
Q  97 agggttaatatgtcttta-ccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||| |||  ||||| ||||| |||||||||||||| ||||||| ||| ||||    
T  46624603 agggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctataaaaaaaaaagtttagattccaaccctgtaaaataa 46624696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 9774971 - 9775048
Alignment:
Q  105 tatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    |||||||||||||||| ||||||||| ||||||||||||| | |||||| |  |||||||||||||| ||||||| ||||    
T  9774971 tatgtctttaccccctgtaatttgggtgagttccggtttacctcctgtaca--aaaaagtttagattccaaccctgtaat 9775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 45459210 - 45459318
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||  ||||| ||||| |||  ||||||||| ||||| |  || || ||||||     
T  45459210 aagggttaatatgtctttaccccctgtaattgggacgagttccggtttacacccctttaaaaaaaattgtttagattccaaccttgaaaaatgaagattc 45459309  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  45459310 tccacaaaa 45459318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 21813894 - 21813802
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatc-ccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||  | || ||| ||| ||||| |||||||||| ||||| ||| ||||    
T  21813894 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcctccgtgtgaaaaaaaaaatttagatttctaccctgtaacataa 21813802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 32976897 - 32976820
Alignment:
Q  99 ggttaatatgtctttacccccta-taatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||  |||| ||||  ||||||||| ||||||||||    
T  32976897 ggttaatatgtctttaccacctcgtaatttgggcgagttccggtttaatccctataaa--aaaaagtttcgatttcaacc 32976820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 21796112 - 21796167
Alignment:
Q  95 aaagggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccc 149  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||    
T  21796112 aaagggttaatatgtctttaccctcctgtaatttgggcgaattccggtttaccccc 21796167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 32975570 - 32975689
Alignment:
Q  95 aaagggttaatatgtctttacccccta-taatttgggcgagttccggtttatccc-ctgtaaaag---------aaaaagtttagatttcaaccctataa 183  Q
    ||||||||||||||||||||| ||||  ||||||| ||||||||||||||| ||  ||||||||          |||||||||||||||||||| |||||    
T  32975570 aaagggttaatatgtctttacacccttgtaatttgagcgagttccggtttaaccttctgtaaaaataaaaaaataaaaagtttagatttcaaccttataa 32975669  T
Q  184 tataaagattatccacaaaa 203  Q
    ||| |||||| |||||||||    
T  32975670 tatgaagattctccacaaaa 32975689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 6667358 - 6667424
Alignment:
Q  129 ggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||| ||||| ||||||||||| |||||||||||||| ||||| | |||| | ||||||||    
T  6667358 ggcgagttccagtttaccccctgtaaaaaaaaaagtttagattccaaccttgtaatttgaagattat 6667424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 45459766 - 45459689
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||||||| | |||||||| ||||||||| |||| ||||||||||| ||   ||||||||| |||||    
T  45459766 ggttaatatgtctttacccc-tgtaatttggacgagttccgatttaccccctgtaaaaaaatttgtttagattccaacc 45459689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 49664430 - 49664349
Alignment:
Q  103 aatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||| |||| ||||| ||||||||| ||||||| ||||| || || |||||  ||||||||||||| ||||||| ||||    
T  49664430 aatatgtatttatcccctgtaatttgggtgagttccagtttaccctctataaaaataaaagtttagattccaaccctgtaat 49664349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 17864836 - 17864884
Alignment:
Q  97 agggttaatatgtctttac-cccctataatttgggcgagttccggttta 144  Q
    ||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  17864836 agggttaatatgtctttacacccctgtaatttgggcgagttctggttta 17864884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 162847 - 162763
Alignment:
Q  108 gtctttaccccctataatttgggcgagttccggtttatc-ccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||| ||||||||| || || |||||||||  ||||||||  |||||||||||||| || ||||| ||||| ||||||    
T  162847 gtctttaccccctgtaatttgggtgattttcggtttatcttcctgtaaa--aaaaagtttagattccatccctaaaatatgaagatt 162763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 9775906 - 9775834
Alignment:
Q  100 gttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaac 176  Q
    |||||||| |||||||||| | |||||| |||||||||||||||||| ||| |||   |||||||||||||| ||||    
T  9775906 gttaatatatctttacccc-tgtaatttaggcgagttccggtttatctcctataa---aaaaagtttagattccaac 9775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 39910648 - 39910724
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaac 176  Q
    |||||||| |||||||| ||||| |||||| |||||||| |||||||  | |||||||| ||||||||||| |||||||    
T  39910648 gggttaatgtgtcttta-cccctgtaatttaggcgagtttcggtttactctctgtaaaa-aaaaagtttagctttcaac 39910724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 33269572 - 33269466
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||| |     
T  33269572 agggttaatatgtctttatcccctataatttggacgagttccggtttaccccctgtaaaaataaaagtttagatttcaaccctataatatgaagattctt 33269473  T
Q  197 cacaaaa 203  Q
    |||||||    
T  33269472 cacaaaa 33269466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 46079137 - 46079246
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||| ||||||    
T  46079137 taaagggttaatatgtttttaccccctgtaatttgggcgagttccggtttaccccctgtaaaaataaaagtttagattccaaccctataatatgaagatt 46079236  T
Q  194 atccacaaaa 203  Q
     | |||||||    
T  46079237 cttcacaaaa 46079246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 25437929 - 25438037
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  25437929 agggttaatatgtctttacccccctgtaatttggacgagttccggtttttccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 25438028  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  25438029 tccacaaaa 25438037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 10670328 - 10670430
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||   || |||||||||||||| ||||||||||||||||||||| ||    
T  10670328 agggttaatatgtctttacctcctgtaatttgggcgagttccggtttaccccctg---aaaaaaaagtttagattccaaccctataatataaagattctc 10670424  T
Q  197 cacaaa 202  Q
    ||||||    
T  10670425 cacaaa 10670430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 10883967 - 10884069
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||   || |||||||||||||| ||||||||||||||||||||| ||    
T  10883967 agggttaatatgtctttacctcctgtaatttgggcgagttccggtttaccccctg---aaaaaaaagtttagattccaaccctataatataaagattctc 10884063  T
Q  197 cacaaa 202  Q
    ||||||    
T  10884064 cacaaa 10884069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 53552352 - 53552246
Alignment:
Q  98 gggttaatatgtctttacc--ccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||| |    
T  53552352 gggttaatatgtctttaccttccctgtaatttgggcgagttccggtttaccccctgtaaaaataaaagtttagatttcaaccctataatatgaagattct 53552253  T
Q  196 ccacaaa 202  Q
     ||||||    
T  53552252 tcacaaa 53552246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 21021284 - 21021178
Alignment:
Q  99 ggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||| ||    
T  21021284 ggttaatatgtttttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 21021185  T
Q  197 cacaaaa 203  Q
    |||||||    
T  21021184 cacaaaa 21021178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 34422050 - 34422159
Alignment:
Q  96 aagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  34422050 aagggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagatt 34422149  T
Q  194 atccacaaaa 203  Q
     |||||||||    
T  34422150 ctccacaaaa 34422159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 48183243 - 48183150
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||||||||||||    
T  48183243 aagggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataa 48183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 30606024 - 30606132
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  30606024 agggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 30606123  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  30606124 tccacaaaa 30606132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 23020203 - 23020100
Alignment:
Q  102 taatatgtctttaccccctataatttgggcgagttccggtttatcccct-gtaaaagaaaaa-gtttagatttcaaccctataatataaagattatccac 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||| ||||| ||||||||| ||||||||||||||||||||| |||||    
T  23020203 taatatgtctttaccccctgtaatttgggcgagttccggttttcccccttgtaaaaaaaaaaagtttagattccaaccctataatataaagattctccac 23020104  T
Q  200 aaaa 203  Q
    ||||    
T  23020103 aaaa 23020100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 21075156 - 21075236
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  21075156 agggttaatatgtatttaccccctgtaatttaggcgagttccggtttatcccctgtaaaaaaaaaagtttagattccaacc 21075236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 42250138 - 42250241
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcc 197  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| ||  |||||||||  ||||||||| |||||||||||||||||| |||||| | |    
T  42250138 gggttaatatgtatttaccccctgtaatttgggcgagttccggttaat--cctgtaaaaataaaagtttatatttcaaccctataatatgaagattcttc 42250235  T
Q  198 acaaaa 203  Q
    ||||||    
T  42250236 acaaaa 42250241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 40314214 - 40314307
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  40314214 aagggttaatatgtctttacctcctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 40314307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 40324290 - 40324383
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  40324290 aagggttaatatgtctttacctcctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 40324383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 30607252 - 30607158
Alignment:
Q  96 aagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  30607252 aagggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 30607158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 48181818 - 48181916
Alignment:
Q  92 aataaagggttaatatgtcttta-ccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| |||  ||||| ||||| |||||||||||||| ||||||| ||| ||||    
T  48181818 aataaagggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctataaaaaaaaaagtttagattccaaccctgtaaaataa 48181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 34423278 - 34423185
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  34423278 agggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 34423185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 48508283 - 48508364
Alignment:
Q  92 aataaagggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagattt 172  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||| |||||||||| ||||    
T  48508283 aatatagggttaatatgtctttaccctcctataattttggcgagttccggtttaccccatgtaaaaaaaaaagtttatattt 48508364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 2856420 - 2856316
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcca 198  Q
    ||||||||| |||||| ||||| |||||||| |||||| ||||||||| | |||||||  ||||||||||||||||||| ||||| || |||||| | ||    
T  2856420 ggttaatatatctttatcccctgtaatttggacgagtttcggtttatcacatgtaaaaataaaagtttagatttcaaccttataaaatgaagatttttca 2856321  T
Q  199 caaaa 203  Q
    |||||    
T  2856320 caaaa 2856316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 25439186 - 25439091
Alignment:
Q  94 taaagggttaatatgtctttaccccc-tataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  25439186 taaagggttaatatgtctttacccccttgtaatttgggcgagttccggttttcccccctgtaaaa-aaaaagtttagattccaaccctgtaaaataa 25439091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 40315440 - 40315333
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| ||||| |||||||| ||||| ||||||||||| |||     
T  40315440 agggataatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaa-tttagattccaaccttataatataaatattc 40315342  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  40315341 tccacaaaa 40315333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 40325515 - 40325408
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| ||||| |||||||| ||||| ||||||||||| |||     
T  40325515 agggataatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaa-tttagattccaaccttataatataaatattc 40325417  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  40325416 tccacaaaa 40325408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 46577134 - 46577048
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||| |||||||| | ||||||||||| ||| |||||||| |||||||||||||| ||||||| ||| ||||    
T  46577134 ttaatatgtctttaccccctgtaatttggacaagttccggtttttcctctgtaaaa-aaaaagtttagattccaaccctgtaacataa 46577048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 2568154 - 2568258
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||| ||||| ||||| ||||||  |||||||| |||||| |  |||| ||| ||||||||||||||||||||||||||||| |||||| ||    
T  2568154 agggttaatatgactttatcccctgtaatttatgcgagttctggttta-cttctgttaaa-aaaaagtttagatttcaaccctataatatgaagattctc 2568251  T
Q  197 cacaaaa 203  Q
    |||||||    
T  2568252 cacaaaa 2568258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 4493688 - 4493766
Alignment:
Q  95 aaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttat-cccctgtaaaagaaaaagtttagatt 171  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||| || |||||||||||    
T  4493688 aaagggttaatatgtctttacccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaataagtttagatt 4493766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 21077185 - 21077107
Alignment:
Q  95 aaagggttaatatgtctttaccccc-tataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatt 171  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  21077185 aaagggttaatatgtatttacccccctgtaatttgggcgagttccggtttactcccctgtaaaaataaaagtttagatt 21077107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 10671549 - 10671469
Alignment:
Q  106 atgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||  ||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||| ||| ||||    
T  10671549 atgtctttacccccg-taatttgggcgagtttcggtttcccccctgtaaaa-aaaaagtttagatttcaaccctgtaaaataa 10671469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 10885189 - 10885109
Alignment:
Q  106 atgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||  ||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||| ||| ||||    
T  10885189 atgtctttacccccg-taatttgggcgagtttcggtttcccccctgtaaaa-aaaaagtttagatttcaaccctgtaaaataa 10885109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 33268190 - 33268282
Alignment:
Q  95 aaagggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||| ||||||||| ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  33268190 aaaggtttaatatgtatttaccctcctataatttaggcgagtttcggttta-cccctgtaaaa-aaaaagtttagattccaaccctgtaaaataa 33268282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 46080605 - 46080508
Alignment:
Q  91 taataaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||| |||||||||||||| |||  ||||| |||||| |   |||||| ||||| |||||||||||||||||||||||||| ||||||| ||| ||||    
T  46080605 taattaagggttaatatgtatttgtcccctgtaatttagataagttccagtttaccccctgtaaaagaaaaagtttagattccaaccctctaaaataa 46080508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 21462977 - 21463033
Alignment:
Q  147 ccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||    
T  21462977 ccctgtaaaaaaaaaagtttagatttcaaccctataatatgaaaattctccacaaaa 21463033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 4499845 - 4499770
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatt 171  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||  ||||||||||| || |||||||||||    
T  4499845 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaataagtttagatt 4499770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 23019001 - 23019092
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccg-gtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| |||| ||||| ||||||||||||||| ||  |||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  23019001 gggttaatatgtttttatcccctgtaatttgggcgagtttcgattttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 23019092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 1968293 - 1968210
Alignment:
Q  87 aatataataaagggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatt 171  Q
    |||| ||| |||||||||||||||||||||| | | |||||||| ||||||||| |||| ||||||||||| ||||||||||||||    
T  1968293 aataaaattaagggttaatatgtctttaccctcttgtaatttggacgagttccgattta-cccctgtaaaa-aaaaagtttagatt 1968210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 2713366 - 2713261
Alignment:
Q  100 gttaatatgtctttacccc-ctataatttgggcgagttccggtttatcccct-gtaaaagaaaaagtttagatttcaaccctataatataaagattatcc 197  Q
    |||||||||||||||| || || ||||||||||||||||| |||||  || | ||||||  |||||||||||||  ||||||||||||| |||||| | |    
T  2713366 gttaatatgtctttacacctctgtaatttgggcgagttccagtttacacctttgtaaaaataaaagtttagattctaaccctataatatgaagattcttc 2713267  T
Q  198 acaaaa 203  Q
    ||||||    
T  2713266 acaaaa 2713261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 468216 - 468297
Alignment:
Q  99 ggttaatatgtctttaccccc-tataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccct 179  Q
    |||||||| || ||||||||| | |||||| ||||||||||||||||  ||||||||||| |||||||||||||| |||||||    
T  468216 ggttaataggtatttacccccctgtaatttaggcgagttccggtttacccccctgtaaaa-aaaaagtttagattccaaccct 468297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 2711976 - 2712064
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||| |||| ||| | |||||| |||||||||||||||| |||||||||||| ||||||||| |||| ||||||| ||| ||||    
T  2711976 ggttaatatgtatttatccc-tgtaatttaggcgagttccggtttattcccctgtaaaa-aaaaagtttcgattccaaccctgtaaaataa 2712064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 21020031 - 21020125
Alignment:
Q  96 aagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||| ||||||||| | ||||| |||||||||| |||||  |||| ||||||| |||||||||||||  ||||||| ||| ||||    
T  21020031 aagggttaatatgtttttacccccctgtaattagggcgagttctggttttcccccctgtaaaaaaaaaagtttagatgacaaccctgtaaaataa 21020125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 21464165 - 21464123
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagtt 136  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  21464165 taaagggttaatatgtctttatcccctttaatttgggcgagtt 21464123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 2569167 - 2569107
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa 162  Q
    |||||||||||||||||| | |||||||||||||||||| |||| | ||||||||| |||||    
T  2569167 ttaatatgtctttacccc-tgtaatttgggcgagttccgatttacctcctgtaaaaaaaaaa 2569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 18926128 - 18926079
Alignment:
Q  18 acaatacttgatacgggtgagatagatcaatgatttttgatattgatcct 67  Q
    |||||||||||| |||||||||||||||| ||  ||||||||||||||||    
T  18926128 acaatacttgatgcgggtgagatagatcattggattttgatattgatcct 18926079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 18817 - 18709
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||| ||||||||||||||  ||||||||||||| ||||||     
T  18817 aaagggttaatatgtctttaccccctgtaatttgggcgagtttcggtttaccccatgtaaaaaaaaaagtttagattcgaaccctataatatgaagattc 18718  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  18717 tccacaaaa 18709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 6155 - 6235
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgt--aaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||| ||| | |||||||| ||| |||| | ||||||| |||  |||| ||||||||||||||||||||    
T  6155 ggttaatatgtctttatcccatgtaatttggacgatttccagcttatcccttgtaaaaaaaaaaaagtttagatttcaacc 6235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 18325538 - 18325646
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||| ||||||||||||||  ||||||||||||| ||||||     
T  18325538 aaagggttaatatgtctttaccccctgtaatttgggcgagtttcggtttaccccatgtaaaaaaaaaagtttagattcgaaccctataatatgaagattc 18325637  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  18325638 tccacaaaa 18325646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 34492474 - 34492367
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa-gtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| |    
T  34492474 agggttaatatgtttttactccctgtaatttgggcgagttccgatttaccccctgtaaaaaaaaaaagtttagatttcaaccctataatataaagattct 34492375  T
Q  196 ccacaaaa 203  Q
    ||||||||    
T  34492374 ccacaaaa 34492367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 28189313 - 28189201
Alignment:
Q  93 ataaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaag 190  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  28189313 ataaagggttaatatgtttttacccccctgtaatttgggcgagttccagtttacccccctgtaaaaaaaaaagtttagattccaaccctataatataaag 28189214  T
Q  191 attatccacaaaa 203  Q
    ||| |||||||||    
T  28189213 attctccacaaaa 28189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 17139766 - 17139870
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||| |||||| ||    
T  17139766 agggttaacatgtctttacccc-tgtaatttgggcgagttccggtttaccccctgtaaaaaaaaaagtttagattccaaccc-ataatatgaagattctc 17139863  T
Q  197 cacaaaa 203  Q
    |||||||    
T  17139864 cacaaaa 17139870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 28743662 - 28743743
Alignment:
Q  122 taatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||  |||||| |||||||||    
T  28743662 taatttgggcgagttccggtttatcccctgtaaaaataaaagtgtagatttcaaccctataatacgaagattctccacaaaa 28743743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 2405104 - 2404998
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||  |||||||||||  ||||||||||||| ||||| |||||||| |||||| |     
T  2405104 gggttaatatgtctttaccctctgtaatttaggcgagttccggtttacccccctgtaaaaataaaagtttagattccaaccttataatatgaagattctt 2405005  T
Q  197 cacaaaa 203  Q
    |||||||    
T  2405004 cacaaaa 2404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 28564308 - 28564246
Alignment:
Q  141 tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  28564308 tttaccccctgtaaaaaaaaaagtttagatttcaaccctataatataaagattctccacaaaa 28564246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 19634500 - 19634608
Alignment:
Q  96 aagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||||||||||||| ||||||||| | |||||| |||||||| ||||||| |||||||||||  ||||||||||||| |||| ||||||||  ||||||     
T  19634500 aagggttaatatgtttttacccccctgtaatttaggcgagtttcggtttaccccctgtaaaaataaaagtttagattccaactctataataagaagattc 19634599  T
Q  195 tccacaaaa 203  Q
    | |||||||    
T  19634600 ttcacaaaa 19634608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 20400140 - 20400220
Alignment:
Q  97 agggttaatatgtctttacccccta-taatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaa 175  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||    
T  20400140 agggttaatatgtctttacccccttgtaatttgggcgagtttcggtttacccccctgtaaaaaaaaaagtttagatttcaa 20400220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 29057502 - 29057411
Alignment:
Q  111 tttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||||| ||| |||||||| |||||||||||||| || |||||||| ||| | ||||||||||||||||||||||| |||||| |||||||||    
T  29057502 tttacctcctgtaatttggacgagttccggttta-cctctgtaaaaaaaataatttagatttcaaccctataatattaagattctccacaaaa 29057411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 17184621 - 17184515
Alignment:
Q  97 agggttaatatgtctttacccc-ctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||| |||||||  |  ||||||||||||| ||||||||| |||| ||||||  |||||||||||||||||||||||||||| |||||| |    
T  17184621 agggttaatatgtttttacccttcggtaatttgggcgaggtccggtttaccccc-gtaaaaataaaagtttagatttcaaccctataatatgaagattct 17184523  T
Q  196 ccacaaaa 203  Q
     |||||||    
T  17184522 tcacaaaa 17184515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 17183318 - 17183398
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    |||| ||||||||| |||||||||| |||||| ||||||||||| |||| ||||||||||| |||||||||||||| |||||    
T  17183318 aaggattaatatgtatttaccccctgtaatttaggcgagttccgatttaccccctgtaaaa-aaaaagtttagattccaacc 17183398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 5756452 - 5756349
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcca 198  Q
    |||||||||||||||||| |   |||| ||||||||||||| |||| | |||||||||  ||||||||||||||||| |||||||||| |||||| | ||    
T  5756452 ggttaatatgtctttaccacgg-taatgtgggcgagttccgatttacctcctgtaaaaataaaagtttagatttcaatcctataatatgaagattcttca 5756354  T
Q  199 caaaa 203  Q
    |||||    
T  5756353 caaaa 5756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 3587746 - 3587664
Alignment:
Q  104 atatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||||||||||| |||||  ||||||||||||||| ||| ||||    
T  3587746 atatgtctttacccc-tgtaatttgggcaagtttcggtttatcccctgtaaaa-aaaaaaattagatttcaaccctgtaaaataa 3587664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 2403670 - 2403764
Alignment:
Q  94 taaagggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||| ||||||||| | |||||| |||||||||||||||| ||||  || || |||||||||||||| ||||||| ||| ||||    
T  2403670 taaagggttaatatgtatttacccccctgtaatttaggcgagttccggttta-cccccctataaaaaaaagtttagattccaaccctgtaaaataa 2403764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 3587012 - 3587108
Alignment:
Q  104 atatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    ||||||||||||||| | ||||||||  ||||| | ||||| ||||| |||||  ||||||||||||||| |||||||||||| |||||| ||| |||||    
T  3587012 atatgtctttacccc-tgtaatttggttgagtttcagtttaccccctctaaaa--aaaagtttagatttcgaccctataatatcaagattctcctcaaaa 3587108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 28188112 - 28188203
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| ||||||||| | |||||||||||||||| || |||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  28188112 gggttaatatgtttttacccccctgtaatttgggcgagttctggttttcccccctgtaaaa-aaaaagtttagattccaaccctgtaaaataa 28188203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 19635914 - 19635820
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatc-ccctgtaaaag--aaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||| ||||||| || |||||| |||||||| ||||||| | |||||||||||  |||||||||| ||| ||||||| ||| ||||    
T  19635914 agggttaatatgtatttaccctctgtaatttaggcgagtttcggtttacctccctgtaaaagaaaaaaagtttaaattccaaccctgtaaaataa 19635820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 16841104 - 16841028
Alignment:
Q  128 gggcgagttccggtttatcccctgtaaaagaa--aaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||||||||| |||||| ||||||||||| ||  ||||||| ||||| |||| ||||||||||||||| |||||||||    
T  16841104 gggcgagttctggttta-cccctgtaaaaaaataaaagtttcgattttaaccttataatataaagattctccacaaaa 16841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 17141258 - 17141192
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaa 162  Q
    |||||||||||||||| |||||||| |||||| | |||||||||||||| ||  ||||||| |||||    
T  17141258 aagggttaatatgtctataccccctgtaatttagtcgagttccggtttaacctttgtaaaaaaaaaa 17141192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 18586387 - 18586307
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgt--aaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||| ||| | |||||||| ||| |||| | ||||||| |||  |||| ||||||||||||||||||||    
T  18586387 ggttaatatgtctttatcccatgtaatttggacgatttccagcttatcccttgtaaaaaaaaaaaagtttagatttcaacc 18586307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 18867308 - 18867217
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| |||||||||||| |||||| | |||||| ||||||| || || ||||| ||||  |||||||| ||||||| ||| ||||    
T  18867308 aagggttaatatatctttaccccctgtaatttagacgagtttcggtttacccgctataaaa-aaaatatttagattccaaccctgtaaaataa 18867217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 995852 - 995911
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaa 156  Q
    ||||||||||||| |||||| | | |||||||||||| |||| ||||||| |||||||||    
T  995852 agggttaatatgtatttacctcttgtaatttgggcgaattccagtttatctcctgtaaaa 995911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 7054072 - 7054107
Alignment:
Q  90 ataataaagggttaatatgtctttaccccctataat 125  Q
    |||||||||||||||||||||||||||||| |||||    
T  7054072 ataataaagggttaatatgtctttacccccgataat 7054107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 33198522 - 33198620
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatt 193  Q
    ||||||||||||| | |||||||||| ||||||  |||| ||||||||||   ||||||||| |||   |||||||| || ||||||||| | ||||||    
T  33198522 aaagggttaatatctgtttaccccctgtaattttagcgatttccggtttacttcctgtaaaaaaaattatttagattccatccctataatttgaagatt 33198620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 28562774 - 28562866
Alignment:
Q  97 agggttaatatgtctttaccc-cctataatttgggcgagttccggtttatcccctgt-aaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||| |||| || ||| |||||||||||||||| |||||  ||||||| |||| |||||||||||||  ||||||| ||| ||||    
T  28562774 agggttaatatgtttttatccacctgtaatttgggcgagttctggttt-ccccctgtaaaaaaaaaaagtttagataccaaccctgtaaaataa 28562866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 9894600 - 9894495
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcc 197  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| |||||  ||||||| |||||||||||||| |||||| |||    
T  9894600 gggttaatatgtctttaccccctataatttaggcgagttccgatttattccctgtaaaaaaaaaaaattagattccaaccctataatatgaagattctcc 9894501  T
Q  198 acaaaa 203  Q
    ||||||    
T  9894500 acaaaa 9894495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 15248388 - 15248496
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||||||||||     
T  15248388 agggataatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 15248487  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  15248488 tccacaaaa 15248496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 22285994 - 22286105
Alignment:
Q  94 taaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcc-cctgtaaaagaaaa-agtttagatttcaaccctataatataaaga 191  Q
    ||||||||||||||||||||| | | |||||||| ||||||||| |||||| || ||||||||| |||| ||||||||||||||||||||||||| ||||    
T  22285994 taaagggttaatatgtctttatctcttataatttaggcgagttctggtttaccctcctgtaaaaaaaaaaagtttagatttcaaccctataatatgaaga 22286093  T
Q  192 ttatccacaaaa 203  Q
    ||||||||||||    
T  22286094 ttatccacaaaa 22286105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 18859071 - 18859178
Alignment:
Q  96 aagggttaatatgtctttacccc-ctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagatta 194  Q
    ||||||||||||||||| ||||  || ||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||     
T  18859071 aagggttaatatgtcttaacccttctgtaatttgggcgagtttcggtttatcccctgtaaaa-aaaaattttagattacaaccctataatattaagattc 18859169  T
Q  195 tccacaaaa 203  Q
    |||||||||    
T  18859170 tccacaaaa 18859178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 25979588 - 25979691
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcca 198  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||  ||||||||||| | |||||||||||||| |||||| | ||    
T  25979588 ggttaatatgtctttaccccctgtaatttgggcga-ttccggtttaccccctgtaaaaataaaagtttagaatccaaccctataatatgaagattcttca 25979686  T
Q  199 caaaa 203  Q
    |||||    
T  25979687 caaaa 25979691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 5202728 - 5202835
Alignment:
Q  97 agggttaatatgtctttacccccta-taatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||| ||||||||||  ||||||||||||||| ||||||| |||||||||||  ||||||||||||| |||||||||||||| |||||| |    
T  5202728 agggttaatatgtttttacccccttgtaatttgggcgagtttcggtttaccccctgtaaaaataaaagtttagattccaaccctataatatgaagattct 5202827  T
Q  196 ccacaaaa 203  Q
     |||||||    
T  5202828 tcacaaaa 5202835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 42742799 - 42742901
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataaagattatcca 198  Q
    |||||||||||||||||||| ||||||||||| ||| ||| ||||| ||||||||||| || |||||||||||||||| |||| |||| |||||| ||||    
T  42742799 ggttaatatgtctttaccccttataatttgggtgagatccagttta-cccctgtaaaa-aagaagtttagatttcaactctatgatatgaagattctcca 42742896  T
Q  199 caaaa 203  Q
    |||||    
T  42742897 caaaa 42742901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 15249597 - 15249506
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccgg-tttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||  ||||||||||| |||||||||||||| ||||||| ||| ||||    
T  15249597 gggttaatatgtctttaccccctgtaatttgggcgagttctggttttcccccctgtaaaaaaaaaagtttagattccaaccctgtaaaataa 15249506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 18695344 - 18695454
Alignment:
Q  96 aagggttaatatgtctttaccccc--tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagat 192  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||| |||| |||||||  |||||| |||||| |||||||||||||| | |||    
T  18695344 aagggttaatatgtctttaccccccctctaatttgggcgagttccggtttacccccttgtaaaaataaaagtatagattccaaccctataatatgatgat 18695443  T
Q  193 tatccacaaaa 203  Q
    | | |||||||    
T  18695444 tcttcacaaaa 18695454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 42744167 - 42744074
Alignment:
Q  96 aagggttaatatgtctttaccccctataatttgggcgagttccggtttatcc-cctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||| ||||||||||| | ||||||||||||||| ||||||| || ||||||||| ||| | |||||||| ||||||| ||| ||||    
T  42744167 aagggttaatacgtctttaccccatgtaatttgggcgagtttcggtttacccacctgtaaaaaaaataatttagattccaaccctgtaaaataa 42744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 10747270 - 10747188
Alignment:
Q  96 aagggttaatatgtctttacc--ccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaacc 177  Q
    |||||||||||||||||||||  ||||||||||||| ||| || || |||| ||||||||||| |||  |||||||||||||||    
T  10747270 aagggttaatatgtctttaccatccctataatttgg-cgaatttcgatttaccccctgtaaaaaaaattgtttagatttcaacc 10747188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 18748854 - 18748766
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||| || || |||||||| |||||||||||||| |||| | |||||  ||||||||||||| ||||||| ||| ||||    
T  18748854 ttaatatgtctttaacctctgtaatttggacgagttccggtttacccccatctaaaaataaaagtttagattccaaccctgtaaaataa 18748766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 9891657 - 9891745
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcc-cctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||||| || |||||||  |||||||||||||| || ||||||||  ||||| |||||||||||| ||| ||| ||||    
T  9891657 ggttaatatgtctttaccctctgtaatttgtccgagttccggtttaacctcctgtaaa--aaaaaatttagatttcaatcctgtaaaataa 9891745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 34384754 - 34384851
Alignment:
Q  100 gttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgt----aaaagaaaaagtttagatttcaaccctataatataaagattat 195  Q
    ||||||||||||||||||||| ||||||| || |||| || ||  |||| |||    |||| |||||||||||||||||||||| | |||||||||||||    
T  34384754 gttaatatgtctttaccccctgtaatttgagcaagtttcgatt--tcccttgtaaaaaaaaaaaaaagtttagatttcaaccctgttatataaagattat 34384851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 29099815 - 29099726
Alignment:
Q  95 aaagggttaatatgtctttacc-ccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataat 184  Q
    ||||||||||||||||||||||  ||| ||||||||| |||| ||||| || | |||| |||| |||||||||||| ||||||||| ||||    
T  29099815 aaagggttaatatgtctttaccttcctgtaatttgggtgagtaccggtata-ctcctgcaaaaaaaaaagtttagaattcaaccctgtaat 29099726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 43238540 - 43238490
Alignment:
Q  153 aaaagaaaaagtttagatttcaaccctataatataaagattatccacaaaa 203  Q
    |||| |||||||||||||| ||||| |||||||| |||||| |||||||||    
T  43238540 aaaaaaaaaagtttagattacaaccttataatatgaagattctccacaaaa 43238490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 43235894 - 43235977
Alignment:
Q  101 ttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||||||   | |||||||| |||||||||||||| ||||| ||||  |||||||||||||| ||||||| ||| ||||    
T  43235894 ttaatatgtctttaccta-tgtaatttggacgagttccggttta-cccctataaa--aaaaagtttagattacaaccctgtaaaataa 43235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 53372 - 53478
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataatataaagattatc 196  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||  |||| ||||||| |||||||||||||| ||||| ||||||||||||||| ||    
T  53372 gggttaatatgtctttaccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccttataatataaagattctc 53471  T
Q  197 cacaaaa 203  Q
    |||||||    
T  53472 cacaaaa 53478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 54562 - 54474
Alignment:
Q  100 gttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||| ||||    
T  54562 gttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaa-aaaaagtttagatttcaaccctgtaaaataa 54474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 100967 - 100877
Alignment:
Q  97 agggttaatatgtctttaccccc-tataatttgggcgagttccggtttatcccc-tgtaaaagaaaaagtttagatttcaaccctataata 185  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||    
T  100967 agggttaatatgtctttacccccctgtaatttaggcgagttccggtttacccccctgtaaaaataaaagtttagatttcaaccctataata 100877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 99613 - 99704
Alignment:
Q  98 gggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||| |||||||||| |||||| |||||||||| |||||  ||||| | ||| |||||||||||||| ||||||| ||| ||||    
T  99613 gggttaatatgtatttaccccctgtaatttaggcgagttccagtttacccccctatgaaaaaaaaagtttagattccaaccctgtaaaataa 99704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0862 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0862
Description:

Target: scaffold0862; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 678 - 790
Alignment:
Q  92 aataaagggttaatatgtctttaccccctataatttgggcgagttccggttta-tcccctgtaaaagaaaaagtttagatttcaaccctataatataaag 190  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||  |||| ||||||  ||||||||||||| ||||| |||||||| |||    
T  678 aataaagggttaatatgtctttacctcttgtaatttgggtgagttccggtttaccccccggtaaaaataaaagtttagattccaaccatataatatgaag 777  T
Q  191 attatccacaaaa 203  Q
    ||| | |||||||    
T  778 attcttcacaaaa 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0862; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 2207 - 2116
Alignment:
Q  97 agggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    ||||||||||||| |||||||||| |||||| |  ||||||||||||  ||||||| ||| |||||||||||||| ||||||| ||| ||||    
T  2207 agggttaatatgtatttaccccctgtaatttagaagagttccggtttgccccctgttaaaaaaaaagtttagattccaaccctgtaaaataa 2116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 17178 - 17252
Alignment:
Q  95 aaagggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttca 174  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  17178 aaagggttaatatgtctttatcc--tataatttaggcgagttccggtttatcccctgtaa---aaaaagtttagatttca 17252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 42083 - 42182
Alignment:
Q  92 aataaagggttaatatgtctttaccccctataatttgggcgagttccggtttatccc-ctgt--aaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||| ||||||||||| |||||||||| |||||| |||||||||||||||| ||| ||||  |||| |||||||||||||| ||||||| ||| ||||    
T  42083 aataaaaggttaatatgtatttaccccctgtaatttaggcgagttccggtttacccctctgtaaaaaaaaaaaagtttagattccaaccctgtaaaataa 42182  T

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Target: scaffold0265 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 18915 - 19007
Alignment:
Q  98 gggttaatatgtctttaccccc-tataatttgggcgagttccggtttatc-ccctgtaaaagaaaaagtttagatttcaaccctataatataa 188  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||  | || ||| ||| ||||| |||||||||| ||||| ||| ||||    
T  18915 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcctccgtgtgaaaaaaaaaatttagatttctaccctgtaacataa 19007  T

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Target: scaffold0606 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 1316 - 1411
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgtaaaagaaaaagtttagatttcaaccct---ataatataaagatt 193  Q
    |||||||||||||||||| |||  ||||||  ||||||| |||||||| | ||||||| |||||||||||||| ||||| |   ||||||||||||||    
T  1316 ggttaatatgtctttacctcctg-aatttgaacgagttctggtttatctc-tgtaaaaaaaaaagtttagattccaaccatttaataatataaagatt 1411  T

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Target: scaffold0760 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 1377 - 1273
Alignment:
Q  99 ggttaatatgtctttaccccctataatttgggcgagttccggtttatcccctgt-aaaagaaaaagtttagatttcaaccctataatataaagattatcc 197  Q
    |||||| ||||||||||||  | ||||||| | ||||||  |||||| |||||| |||| |||||||||| |||||| || |||||||| |||||| ||     
T  1377 ggttaacatgtctttaccctttgtaatttgagtgagttctagtttat-ccctgtaaaaaaaaaaagtttaaatttcatccttataatatgaagattctct 1279  T
Q  198 acaaaa 203  Q
    ||||||    
T  1278 acaaaa 1273  T

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