View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8986_low_33 (Length: 556)
Name: NF8986_low_33
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8986_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 526; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 1 - 538
Target Start/End: Original strand, 32373910 - 32374447
Alignment:
| Q |
1 |
tttgagacataccttgagaagggctaaaagtgctttttctgcaaaagggattggtgagaacattggaaattgagcaactgttaggagatattcatggaag |
100 |
Q |
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| T |
32373910 |
tttgagacataccttgagaagggctaaaagtgctttttctgcaaaagggattggtgagaacattggaaattgagcaactgttaggagatattcatggaag |
32374009 |
T |
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| Q |
101 |
tttggccaaaatatatggaatctatgaacattggctaatgataatgcagtgattaaatcccaacaaaatccaacggtttcttcttcctcgaccggtgtgc |
200 |
Q |
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| T |
32374010 |
tttggccaaaatatatggaatctatgaacattggctaatgataatgcagtgattaaatcccaacaaaatccaacggtttcttcttcctcgaccggtgtgc |
32374109 |
T |
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| Q |
201 |
taaacttttggccttttccagcagctgcaaatatcaaagatcttccaaggttttgtaaacattcttttggaatgtttgaactacttccaaagatgctacc |
300 |
Q |
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| T |
32374110 |
taaacttttggccttttccagcagctgcaaatatcaaagatcttccaaggttttgtaaacattcttttggaatgtttgaactacttccaaagatgctacc |
32374209 |
T |
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| Q |
301 |
aattctacacagttttatcattttgagattttgttcaaattcactaccaagtgtcaaaccatcttctgagttttcttgcgaaagaagcgacaaacgagtc |
400 |
Q |
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| T |
32374210 |
aattctacacagttttatcattttgagattttgttcaaattcactaccaagtgtcaaaccatcttctgagttttcttgcgaaagaagcgataaacgagtc |
32374309 |
T |
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| Q |
401 |
atgacgctaggaaaccgatgatgagttccggatttatgattagcagttggagagacgacacctgatgattcaggcattgttggagcgttcgctggcgcat |
500 |
Q |
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| T |
32374310 |
atgacgcttggaaaccgatgatgagttccggatttatgattagcagttggagagacgacacctgatgattcaggcattgttggtgcgttcgctggcgcat |
32374409 |
T |
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| Q |
501 |
caaagtcgatggtggattgaggtagcaaccttagcctt |
538 |
Q |
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| T |
32374410 |
caaagtcgatggtggattgaggtagcaaccttagcctt |
32374447 |
T |
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