View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8986_low_67 (Length: 403)
Name: NF8986_low_67
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8986_low_67 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 390; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 9838628 - 9839017
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838628 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
9838727 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838728 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
9838827 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838828 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
9838927 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838928 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
9839017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 9849506 - 9849895
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849506 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
9849605 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849606 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
9849705 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849706 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
9849805 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849806 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
9849895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 390
Target Start/End: Complemental strand, 10376147 - 10375758
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||||||| ||||| | | ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
10376147 |
gtgatagcctgcaattctttgcacagtataaagatatacttggtctgcaaactaaaagtggtagagtttctcgtagaacaccttcaagttcagtggtaaa |
10376048 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||| ||||||||||||||| ||| ||||| || |||||||||||||||||||| | | ||||||| | ||||| |||||||||||||||||| |
|
|
| T |
10376047 |
tgaatctgtcatggtgggtaggaaggatgataaagacactataatgaacatgttgctatcagagacagacacatcgcataataatataggtgttgttgca |
10375948 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||| |
|
|
| T |
10375947 |
attttgggcatgggaggtttaggaaaaactacccttgcacaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtg |
10375848 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
10375847 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
10375758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 11769001 - 11769386
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||| ||| ||||||||| |||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
11769001 |
gtgaaagcctgcaactttttgcacaaaataaagatatattaggtttgcaaactaaaagtgctagagtttctcgtagaacaccttcaagttcagtggtaaa |
11769100 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| |||||| |||||||||||||||||| |
|
|
| T |
11769101 |
tgaatctgtcatagtgggtaggaagaatgacaaagagacaataatgaacatgttgctatcacagagagacacaatccataataatataggtgttgttgca |
11769200 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| ||| ||| |||||||| | |
|
|
| T |
11769201 |
attttgggcatgggaggtttaggaaaaactacccttgctcaacttgtctacaatgataaagaagttcaacaatattttgatttgaaggcatgggcttgcg |
11769300 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgat |
386 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||| |
|
|
| T |
11769301 |
tgtctgaggattttgatattatgagagtaaccaggtctctccttgaatcggtcacttcaagaacttgggatagcaataatcttgat |
11769386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 390
Target Start/End: Complemental strand, 10434346 - 10433957
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| ||||| ||||| | ||| || |
|
|
| T |
10434346 |
gtgaaagcttgcaactttttgcacagaataaagatatacttggtctgcaaaccaaaagtgggagagtttctcatagaaatccttcaagttctgtggtcaa |
10434247 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
||||||| || |||| || ||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||| ||||| || ||||||||||||||| |
|
|
| T |
10434246 |
tgaatctttcatggttggaaggaaggatgacaaagagacaataatgaacatgttgctatcacagagaaacacaactcataataagataggtgttgttgca |
10434147 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||| |||||||||| |
|
|
| T |
10434146 |
attttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcctgggcttgtg |
10434047 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10434046 |
tgtctcaggattttgatattttgaaagtaaccaagtctctccttgaatcggtcacttccagaacttgggatagcaataatcttgatgtcc |
10433957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 56 - 390
Target Start/End: Original strand, 10184064 - 10184398
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
155 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10184064 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10184163 |
T |
|
| Q |
156 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
255 |
Q |
| |
|
|| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10184164 |
ctgtcacagagagacacaacccataatgctataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatg |
10184263 |
T |
|
| Q |
256 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
355 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
10184264 |
ataaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtccgaggattttgatattatgagagtaaccaagtctctccttgaatctgtcac |
10184363 |
T |
|
| Q |
356 |
ttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10184364 |
ttccacaacttgggatagcaataatcttgatgtcc |
10184398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 56 - 390
Target Start/End: Original strand, 10126750 - 10127084
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
155 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10126750 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10126849 |
T |
|
| Q |
156 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
255 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10126850 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
10126949 |
T |
|
| Q |
256 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
355 |
Q |
| |
|
|| ||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
10126950 |
ataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcac |
10127049 |
T |
|
| Q |
356 |
ttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10127050 |
ttccacaacttgggatagcaataatcttgatgtcc |
10127084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 28 - 390
Target Start/End: Original strand, 10580395 - 10580757
Alignment:
| Q |
28 |
ataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaaggg |
127 |
Q |
| |
|
|||||||| | ||||||||||||||||| |||||||||||||||| | |||| ||||| ||||| | | | || ||||||||| ||||||||||||||| |
|
|
| T |
10580395 |
ataaagatgtccttggtttgcaaactaagagtgctagagtttctcatggaactccttcaagttctgtgtttaacgaatctgtcatggtgggtaggaagga |
10580494 |
T |
|
| Q |
128 |
tgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaa |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580495 |
tgacaaagagacaataatgaacatgttgctatcacagagaaacacaatccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaa |
10580594 |
T |
|
| Q |
228 |
actacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagag |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
10580595 |
actacccttgcccaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcgtgggtttgtgtgtctgaggattttgatattatgagag |
10580694 |
T |
|
| Q |
328 |
taaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| ||| | ||| ||||||||||||||||||| |
|
|
| T |
10580695 |
taacaaagtctctccttgaatctgtcacttccacaacttcggaaagcaataatcttgatgtcc |
10580757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 56 - 390
Target Start/End: Original strand, 10663348 - 10663682
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
155 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663348 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
10663447 |
T |
|
| Q |
156 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
255 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663448 |
ctatcacagagagacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
10663547 |
T |
|
| Q |
256 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
355 |
Q |
| |
|
|| ||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
10663548 |
ataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcac |
10663647 |
T |
|
| Q |
356 |
ttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||||| |
|
|
| T |
10663648 |
ttccacaacttgggatagcaaagatcttgatgtcc |
10663682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 30 - 390
Target Start/End: Complemental strand, 10364071 - 10363711
Alignment:
| Q |
30 |
aaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtg |
129 |
Q |
| |
|
|||||||||||| |||||||||||||||| | || ||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| || |
|
|
| T |
10364071 |
aaagatatacttcgtttgcaaactaaaagcacaagggtttcacgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatg |
10363972 |
T |
|
| Q |
130 |
acaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaac |
229 |
Q |
| |
|
|||||||||||||||||||||||||||| || | ||||| |||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10363971 |
acaaagagacaataatgaacatgttgctttcaaagagagaaacaaccgacaataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaac |
10363872 |
T |
|
| Q |
230 |
tacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagta |
329 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
10363871 |
tacccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtctctgaggattttgatattatgagagta |
10363772 |
T |
|
| Q |
330 |
accaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|| ||||||||||||||||| | |||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
10363771 |
acaaagtctctccttgaatctgccacttccataacttcggaaagcaataatcttgatgtcc |
10363711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 56 - 390
Target Start/End: Original strand, 10031825 - 10032159
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
155 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| ||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10031825 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10031924 |
T |
|
| Q |
156 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
255 |
Q |
| |
|
||||| || |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10031925 |
ctatcacagagagacgcatcccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
10032024 |
T |
|
| Q |
256 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
355 |
Q |
| |
|
|| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
10032025 |
ataaagaagttcaacaacattttgatttgaaggcctgggcttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcac |
10032124 |
T |
|
| Q |
356 |
ttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
||||| ||| | ||||||||| |||||||||||| |
|
|
| T |
10032125 |
ttccacaacttcggatagcaaagatcttgatgtcc |
10032159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 56 - 385
Target Start/End: Original strand, 10260520 - 10260849
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
155 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10260520 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10260619 |
T |
|
| Q |
156 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
255 |
Q |
| |
|
||||| || ||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10260620 |
ctatcacagagagaaacaaccaacaataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatg |
10260719 |
T |
|
| Q |
256 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
355 |
Q |
| |
|
|| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
10260720 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcagtcac |
10260819 |
T |
|
| Q |
356 |
ttccataacatgggatagcaataatcttga |
385 |
Q |
| |
|
||| | || ||||||| |||||||||||| |
|
|
| T |
10260820 |
ttctagaaattgggatatcaataatcttga |
10260849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 10088557 - 10088946
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||| ||||||||| | | ||||||||||||||||||||||||| |||||||||||| || || ||||| | |||||| ||||| ||||| | |||||| |
|
|
| T |
10088557 |
gtgaaagcttgcaattgtttgcacagaataaagatatacttggtctgcaaactaaaatcgcaagggtttcacatagaactccttcaagttcggtggtaaa |
10088656 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| || | ||||| |||||| | || |||||||||||||||||| |
|
|
| T |
10088657 |
tgaatctgtcatggtgggtaggaaggatgataaagagacaataatgaacatgttgctttcaaagagagaaacaaccgacaataatataggtgttgttgca |
10088756 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||| |||| ||||| |
|
|
| T |
10088757 |
attttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcatgggtttgtg |
10088856 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| |||||| ||||| |
|
|
| T |
10088857 |
tgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtcc |
10088946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 10195440 - 10195829
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||| ||||||||| | | ||||||||||||||||||||||||| |||||||||||| || || ||||| | |||||| ||||| ||||||| |||||| |
|
|
| T |
10195440 |
gtgaaagcttgcaattgtttgcacagaataaagatatacttggtctgcaaactaaaaacgcaagggtttcacatagaactccttcaagttcagtggtaaa |
10195539 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||| || | ||||| |||||| | || |||||||||||||||||| |
|
|
| T |
10195540 |
tgaatctgtcatggtgggtagaaaggatgataaagagacaataatgaacatgttgctttcaaagagagaaacaaccgacaataatataggtgttgttgca |
10195639 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||| |||| ||||| |
|
|
| T |
10195640 |
attttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcatgggtttgtg |
10195739 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| |||||| ||||| |
|
|
| T |
10195740 |
tgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtcc |
10195829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 390
Target Start/End: Original strand, 10077052 - 10077425
Alignment:
| Q |
20 |
tgcacagaataaagatatacttggtttgcaaactaaaagtgctagagt---ttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtg |
116 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
10077052 |
tgcacagaataaagatgtacttggtctgcaaactaaaattgctagagtaatttctcgtagaacaccttcaagttcagtggtaaatgaatctgagatggtt |
10077151 |
T |
|
| Q |
117 |
ggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggag |
216 |
Q |
| |
|
|||| | || |||||||||||||||||||||||||||||||||| | | | ||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
10077152 |
ggtatggagcgtgacaaagagacaataatgaacatgttgctatcagggatgggcggaacccataataagataggtgttgttgcaattttgggcatgggag |
10077251 |
T |
|
| Q |
217 |
gtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttga |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||||| | | ||||||||| || ||| |||||||||||||||||||||||||| |
|
|
| T |
10077252 |
gtttaggaaaaactacccttgcccaacttgtttacaatgattataaagttcgataccattttgatttgcaggcatgggcttgtgtgtctgaggattttga |
10077351 |
T |
|
| Q |
317 |
tattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||| | ||| ||||||| |||| |||||||||||| |
|
|
| T |
10077352 |
tattatgagagtaaccaagtctctccttgaatcgatcacttctagaacttgggataacaatgatcttgatgtcc |
10077425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 358
Target Start/End: Complemental strand, 11131319 - 11130971
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||| ||| |||||| || |||||||| |||||||| |||||||||||||||||| ||| | |||||||||||||||||| | ||| |||||||| | |
|
|
| T |
11131319 |
tgcaaatttttgcacaaaacaaagatatccttggtttacaaactaaaagtgctagaattttccatagaacaccttctagttctgtggttaatgaatcatt |
11131220 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
| |||| ||||| |||| ||||||||||||||||| ||||||||||||||| | || ||| | | |||||||||| ||||||||||||||||| || |
|
|
| T |
11131219 |
catggttggtagaaaggatgacaaagagacaataacgaacatgttgctatcaaagagcagcactagcaataacaatatcggtgttgttgcaattttaggt |
11131120 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||||||| | |||||||| |||||||| ||| ||| ||||||||||||| |||||||| |||| |||||| | | || ||||||||||| || |||| |
|
|
| T |
11131119 |
atgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactttgatctcaaagcatgggcttgtgtatcggagg |
11131020 |
T |
|
| Q |
310 |
attttgatattttgagagtaaccaagtctctccttgaatcggtcacttc |
358 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||||||| |||||||| |
|
|
| T |
11131019 |
attttgatattttaagagtaactaaaactctccttgaatctgtcacttc |
11130971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 358
Target Start/End: Complemental strand, 11149147 - 11148799
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||| ||| |||||| || |||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||||| | ||| |||||||| | |
|
|
| T |
11149147 |
tgcaaatttttgcacaaaacaaagatatccttggtttgcaaactaaaagtgctagaattttccatagaacaccttctagttctgtggttaatgaatcatt |
11149048 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
| |||| ||||| |||| ||||||||||| ||||| ||||||||||||||| | || ||| | | |||||||||| ||||||||||||||||| || |
|
|
| T |
11149047 |
catggttggtagaaaggatgacaaagagataataacgaacatgttgctatcaaagagcagcactagcaataacaatatcggtgttgttgcaattttaggt |
11148948 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||||||| | |||||||| |||||||| ||| ||| ||||||||||||| |||||||| |||| |||||| | | || ||||||||||| || |||| |
|
|
| T |
11148947 |
atgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactttgatctcaaagcatgggcttgtgtatcggagg |
11148848 |
T |
|
| Q |
310 |
attttgatattttgagagtaaccaagtctctccttgaatcggtcacttc |
358 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||||||| |||||||| |
|
|
| T |
11148847 |
attttgatattttaagagtaactaaaactctccttgaatctgtcacttc |
11148799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 4 - 322
Target Start/End: Original strand, 10889076 - 10889394
Alignment:
| Q |
4 |
atagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatga |
103 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| ||||||||||||||||||| || || ||||||||||||||| ||||| ||||||| || ||||| |
|
|
| T |
10889076 |
atagcttgcaactttttgcacaacataaagatatccttggtttgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatga |
10889175 |
T |
|
| Q |
104 |
atctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaatt |
203 |
Q |
| |
|
||||||| |||| ||||| || | ||| ||||||||||||||||||||||||||||| | || ||| | |||||||||| ||||||||||||||| |
|
|
| T |
10889176 |
atctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgctatcagagagcagcactaggaataacaatatcggtgttgttgcaatt |
10889275 |
T |
|
| Q |
204 |
ttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgt |
303 |
Q |
| |
|
|| || ||||||||| | || ||||| || ||||| ||||||||||||||||||||| |||||||| | || |||||| | | || ||||||||||| | |
|
|
| T |
10889276 |
ttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatctcaaagcatgggcttgtgtat |
10889375 |
T |
|
| Q |
304 |
ctgaggattttgatatttt |
322 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
10889376 |
ctgaggattttgatatttt |
10889394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 11160319 - 11159934
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||| || || ||||||||||||||| ||||| ||||||| || || |
|
|
| T |
11160319 |
gtgatagcttgcaacttttcgcacaacataaagatatccttggtttgcaaagtaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaa |
11160220 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|| ||||||| |||| ||||| || | ||| ||||||||||||||||||||||||||||| | || ||| | ||||||||||||| ||||||||| |
|
|
| T |
11160219 |
tgcatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgctatcagagagtagcactggcaataacaatataggcgttgttgca |
11160120 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
||||| || ||||||||| | || ||||| || ||||| ||||||||||||||| ||||| |||||||| | ||||||||| | | || |||||||||| |
|
|
| T |
11160119 |
attttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaataatgaaaaagttcaagatcattttgatttcaaagcatgggcttgtg |
11160020 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgat |
386 |
Q |
| |
|
| |||||||||||||||||||| ||||| || |||| |||||||| |||||||| | | | ||||| | ||||||||||||| |
|
|
| T |
11160019 |
tatctgaggattttgatattttatctgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaccaataatcttgat |
11159934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 8861053 - 8861438
Alignment:
| Q |
1 |
gtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaa |
100 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| || || ||||||||||||||| ||||| ||||||| || || |
|
|
| T |
8861053 |
gtgatagcttgcaaattttcgcacaacataaagatatccttggtttgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaa |
8861152 |
T |
|
| Q |
101 |
tgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgca |
200 |
Q |
| |
|
|||||||||| |||| ||||| || | ||| ||||||||| ||||||||||||||||||| | || ||| | |||||||||| |||||||||||| |
|
|
| T |
8861153 |
tgaatctgtcatggttggtagaaatgatgataaagagacagtaatgaacatgttgctatcagagagcagcactaggaataacaatatcggtgttgttgca |
8861252 |
T |
|
| Q |
201 |
attttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtg |
300 |
Q |
| |
|
||||| || ||||||||| | || ||||| || ||||| ||||||||||||||||||||| |||||||| | || |||||| | | || |||||||||| |
|
|
| T |
8861253 |
attttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatctcaaagcatgggcttgtg |
8861352 |
T |
|
| Q |
301 |
tgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgat |
386 |
Q |
| |
|
| || |||||||||||||||| | ||||| || |||| |||||||| |||||||| | | | ||||| | ||||||||||||| |
|
|
| T |
8861353 |
tatcagaggattttgatatttcaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatcttgat |
8861438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 349
Target Start/End: Original strand, 10527281 - 10527452
Alignment:
| Q |
178 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
277 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||| ||||||||| | || ||||| |||||||| ||||||||||||||||||||| | ||| |||| ||||| |
|
|
| T |
10527281 |
ataataatttaggtgttgttgcaatcttgggtatgggaggtgtcggtaaaacaacccttgcacaacttgtttacaatgatgaaaaggttgaacaccattt |
10527380 |
T |
|
| Q |
278 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
349 |
Q |
| |
|
|||| | | ||| |||| || ||| || |||||||| ||| || |||||||||||||||||||| ||||||| |
|
|
| T |
10527381 |
tgatctcaaggcctgggtttatgtatcagaggatttcgatgttgtgagagtaaccaagtctctcattgaatc |
10527452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 13332680 - 13333001
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || || |||||||||| |||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
13332680 |
tgcaactttttgcacaacagagagatattcttggcttgcaaactgtgagcgcgagagtttctcttagaacgccttcaagttcaatggtaaatgaatctgt |
13332779 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
|||| |||||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | | | ||||| |||||||||||||| |
|
|
| T |
13332780 |
tatggttggtaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtgttggtgtggttgcaattttgggt |
13332879 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |||| |||||| || |||| |
|
|
| T |
13332880 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
13332979 |
T |
|
| Q |
310 |
attttgatattttgagagtaac |
331 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
13332980 |
atttcgatattctgagagtaac |
13333001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 63 - 328
Target Start/End: Original strand, 13343918 - 13344183
Alignment:
| Q |
63 |
agagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctc |
162 |
Q |
| |
|
|||||||||| ||||||||||| |||||| ||||||||||||||| |||| |||||||||| ||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13343918 |
agagtttctctaagaacaccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
13344017 |
T |
|
| Q |
163 |
aaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaaga |
262 |
Q |
| |
|
| || | ||| ||| ||| | ||| ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| |||| |
|
|
| T |
13344018 |
acagtggcactaccaatagtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13344117 |
T |
|
| Q |
263 |
agttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagt |
328 |
Q |
| |
|
||||||| | ||||||||| ||| | |||| |||||| || |||||||| |||||| ||||||| |
|
|
| T |
13344118 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagt |
13344183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 331
Target Start/End: Original strand, 13289494 - 13289762
Alignment:
| Q |
63 |
agagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctc |
162 |
Q |
| |
|
|||||||||| |||||| ||||| |||||| ||||||| ||||||| |||| |||||||||| ||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13289494 |
agagtttctcttagaacgccttcaagttcaatggtaaataaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
13289593 |
T |
|
| Q |
163 |
aaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaaga |
262 |
Q |
| |
|
| || | ||| ||| ||| | ||| ||||| || ||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||| |||| |
|
|
| T |
13289594 |
acagtggcactaccaatagtagtattggtgtggtcgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13289693 |
T |
|
| Q |
263 |
agttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
331 |
Q |
| |
|
||||||| | ||||||||| ||| | |||| |||||| || |||||||| ||||||||||||||||| |
|
|
| T |
13289694 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattttgagagtaac |
13289762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 56 - 349
Target Start/End: Original strand, 10500375 - 10500671
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
155 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| | ||| ||||| | | | | || |||||| |
|
|
| T |
10500375 |
aagtggtagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaatgatgataaagatagactcgtcaatatgttg |
10500474 |
T |
|
| Q |
156 |
ctatctcaaagagacaca---acccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttaca |
252 |
Q |
| |
|
|||| | | | ||| | |||| ||| |||||||||||||||||||||| |||||||| | || ||||| || ||||| ||||||||||||| |
|
|
| T |
10500475 |
gtatcagatattggaacaggcagaaataataatttaggtgttgttgcaattttgggtatgggaggcgtcggtaaaacaacacttgctcaacttgtttaca |
10500574 |
T |
|
| Q |
253 |
atgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
349 |
Q |
| |
|
| || || || || || ||||||||||| ||| ||| ||| |||||| | |||||||| ||| || ||||| ||||||| |||||||||||||| |
|
|
| T |
10500575 |
acgacgataaaattgaagaacattttgatctgaaggcatggatttgtgtaccggaggatttcgatgttgtgagaataaccaaatctctccttgaatc |
10500671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 13160756 - 13161077
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || || |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
13160756 |
tgcaactttttgcacaacaaagagatatccttggcttgcaaactgtgagcgcgagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
13160855 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
|||| |||||||||| ||| || |||| | | | | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
13160856 |
tatggttggtaggaaggatgataaggagagactcgttagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
13160955 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |||| |||||| || |||| |
|
|
| T |
13160956 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
13161055 |
T |
|
| Q |
310 |
attttgatattttgagagtaac |
331 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
13161056 |
atttcgatattctgagagtaac |
13161077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 13170807 - 13171128
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || | |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
13170807 |
tgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
13170906 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
|||| || ||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
13170907 |
tatggttggaaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
13171006 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |||| |||||| || |||| |
|
|
| T |
13171007 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
13171106 |
T |
|
| Q |
310 |
attttgatattttgagagtaac |
331 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
13171107 |
atttcgatattctgagagtaac |
13171128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 349
Target Start/End: Original strand, 10517408 - 10517579
Alignment:
| Q |
178 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
277 |
Q |
| |
|
|||| ||| ||||||||| ||||||| |||| |||||||| | || ||||| |||||||| || ||||||||||||||| | ||||| |||||||||| |
|
|
| T |
10517408 |
ataataatttaggtgttgctgcaattgtgggtatgggaggcgtcggtaaaacgacccttgcacagtttgtttacaatgatgcaaaagttgaacaacattt |
10517507 |
T |
|
| Q |
278 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
349 |
Q |
| |
|
|||| | | || |||| |||||| ||||||||||||||| || | |||| |||||||||| |||||||||| |
|
|
| T |
10517508 |
tgatttcaaagcctgggtttgtgtatctgaggattttgatgttattagagcaaccaagtctatccttgaatc |
10517579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 349
Target Start/End: Complemental strand, 11782128 - 11781957
Alignment:
| Q |
178 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
277 |
Q |
| |
|
|||| ||| |||||||||| ||||||||||| |||||||| | || ||||| |||||||| || |||||||||||||||| ||||| |||||||||| |
|
|
| T |
11782128 |
ataataatttaggtgttgtcgcaattttgggtatgggaggcgtcggtaaaacgacccttgcacagcttgtttacaatgatgtgaaagttgaacaacattt |
11782029 |
T |
|
| Q |
278 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
349 |
Q |
| |
|
|||| | | | |||| |||||| || |||||||| ||| || | ||| |||||||||||||||||||||| |
|
|
| T |
11782028 |
tgatttcaaagtctgggtttgtgtatcggaggatttcgatgttgttagaataaccaagtctctccttgaatc |
11781957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 10527157 - 10527225
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaa |
124 |
Q |
| |
|
||||| |||| ||||||||||||| ||||| ||||||| |||||||||||||||| | ||||||||||| |
|
|
| T |
10527157 |
aagtgatagattttctcgtagaaccccttcaagttcagtggtaaatgaatctgtcattgtgggtaggaa |
10527225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 11782245 - 11782173
Alignment:
| Q |
64 |
gagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaaga |
136 |
Q |
| |
|
|||||||| |||||| ||||| ||||||| | ||||| |||||| ||||||||||||||| | ||| ||||| |
|
|
| T |
11782245 |
gagtttcttctagaaccccttcaagttcagtgctaaatcaatctgacgtggtgggtaggaatgatgataaaga |
11782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 28 - 390
Target Start/End: Original strand, 26906691 - 26907053
Alignment:
| Q |
28 |
ataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaaggg |
127 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
26906691 |
ataaagatatccttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaagga |
26906790 |
T |
|
| Q |
128 |
tgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaa |
227 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26906791 |
tgacaaagagacaataatgaatatgttgctatcagagagagacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaa |
26906890 |
T |
|
| Q |
228 |
actacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagag |
327 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
26906891 |
actacccttgcccaacttctttacaatgataaagaagttcaacggcattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagag |
26906990 |
T |
|
| Q |
328 |
taaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
390 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
26906991 |
taaccaaatctctccttgaatcggtcacttccagaacttgggataccaataatcttgatgtcc |
26907053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 178 - 349
Target Start/End: Complemental strand, 17853069 - 17852898
Alignment:
| Q |
178 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
277 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| ||||||||| | || ||||| |||||||| || |||||||||||||||||| | ||| |||| ||||| |
|
|
| T |
17853069 |
ataacaatttaggtgttgttgcaatattggggatgggaggtgtcggtaaaacgacccttgcacagcttgtttacaatgatgaaaaggttgaacatcattt |
17852970 |
T |
|
| Q |
278 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
349 |
Q |
| |
|
|||| | | || |||| |||||| || || ||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
17852969 |
tgatctcaaagcctgggtttgtgtatcagaagattttgatgttgtgagagtaaccaagtctctccttgaatc |
17852898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 17853194 - 17853126
Alignment:
| Q |
56 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaa |
124 |
Q |
| |
|
||||| |||||||||||||||||| ||||| ||||| | |||||||||||||||| |||| || ||||| |
|
|
| T |
17853194 |
aagtggtagagtttctcgtagaaccccttcaagttccgtggtaaatgaatctgtcatggtaggaaggaa |
17853126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 44958002 - 44957888
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||||||| ||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| | |
|
|
| T |
44958002 |
tgcaactttttgcacagcataaagatataattggtttggaaactaaaagtgctagagtttctcatagaacaccttcaagttcaggggttaatgaatctat |
44957903 |
T |
|
| Q |
110 |
cgtggtgggtaggaa |
124 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
44957902 |
tatggtgggcaggaa |
44957888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 349
Target Start/End: Original strand, 11484961 - 11485132
Alignment:
| Q |
178 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
277 |
Q |
| |
|
|||| ||| ||||||||||||||||||||| |||||||| | || ||||| |||||||| |||||||||||||| |||||| ||||| |||| ||||| |
|
|
| T |
11484961 |
ataataatttaggtgttgttgcaattttggttatgggaggcgtcggtaaaacgacccttgcacaacttgtttacaacgatgaaaaagttgaacagcattt |
11485060 |
T |
|
| Q |
278 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
349 |
Q |
| |
|
|||| | | || |||| |||||| || |||||||| ||| | |||| |||||||||| ||||||||||| |
|
|
| T |
11485061 |
tgatctcaaagcatgggtttgtgtatcggaggatttcgatgtcgtgaggataaccaagtccctccttgaatc |
11485132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 11484842 - 11484904
Alignment:
| Q |
62 |
tagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaa |
124 |
Q |
| |
|
||||||||||||||||||||| || ||||||| ||| ||||||||||| ||||||| ||||| |
|
|
| T |
11484842 |
tagagtttctcgtagaacaccatcaagttcagtggtgaatgaatctgttatggtgggaaggaa |
11484904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 146232 - 145911
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || | |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
146232 |
tgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
146133 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
|||| |||||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
146132 |
tatggttggtaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
146033 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |||| |||||| || |||| |
|
|
| T |
146032 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
145933 |
T |
|
| Q |
310 |
attttgatattttgagagtaac |
331 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
145932 |
atttcgatattctgagagtaac |
145911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 136181 - 135860
Alignment:
| Q |
10 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
109 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || | |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
136181 |
tgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
136082 |
T |
|
| Q |
110 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
209 |
Q |
| |
|
|||| || ||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
136081 |
tatggttggaaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
135982 |
T |
|
| Q |
210 |
atgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgagg |
309 |
Q |
| |
|
||||| ||| | || ||||| || |||||||||||| |||| |||||| ||||||||||| | ||||||||| ||| | |||| |||||| || |||| |
|
|
| T |
135981 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
135882 |
T |
|
| Q |
310 |
attttgatattttgagagtaac |
331 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
135881 |
atttcgatattctgagagtaac |
135860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 50081 - 49985
Alignment:
| Q |
30 |
aaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagg |
126 |
Q |
| |
|
|||||||||||| |||||||||||||||| | || ||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
50081 |
aaagatatacttcgtttgcaaactaaaagcacaagggtttcacgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaagg |
49985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 29836587 - 29836756
Alignment:
| Q |
178 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
277 |
Q |
| |
|
|||| ||||||||||| || |||||| |||||||||||| | || ||||| ||||| || | |||| | ||||| | ||||||||| || | ||||| |
|
|
| T |
29836587 |
ataataatataggtgtagtcgcaattacaggcatgggaggtatcggtaaaacgaccctcgctcgacttatatacaaccaggaagaagttaaaaatcattt |
29836686 |
T |
|
| Q |
278 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaa |
347 |
Q |
| |
|
|||| | | |||| |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
29836687 |
tgatgtacaagtctgggtttgtgtgtctgaagattttgatatgttgagagtaaccaaatctctccttgaa |
29836756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 31679845 - 31679703
Alignment:
| Q |
191 |
tgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcg |
290 |
Q |
| |
|
||||||| ||||||| |||||||||||| | || ||||| |||| || |||||| ||||||||||| |||| |||||| ||| ||||||| | | || |
|
|
| T |
31679845 |
tgttgtttcaattttcggcatgggaggtgtcggtaaaacagccctagctcaacttctttacaatgataaagatgttcaagaacgttttgatgtaaaagct |
31679746 |
T |
|
| Q |
291 |
tgggcttgtgtgtctgaggattttgatattttgagagtaacca |
333 |
Q |
| |
|
|||| |||| |||| || || |||||| ||||||| ||||||| |
|
|
| T |
31679745 |
tgggtttgtctgtccgaagagtttgatgttttgagggtaacca |
31679703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 31680024 - 31679876
Alignment:
| Q |
12 |
caactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcg |
111 |
Q |
| |
|
||||||| |||||| | |||||||| ||||| ||||||||| ||||| ||| |||| || |||||||||||| |||||| ||| || ||||| || |
|
|
| T |
31680024 |
caactttttgcacaacaaaaagatatccttgggttgcaaactgtaagtggtagggtttttcttagaacaccttcaagttcactagtagatcaatctttca |
31679925 |
T |
|
| Q |
112 |
tggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatc |
160 |
Q |
| |
|
|||| ||||||||| |||| ||||||| | ||| || ||||||||||| |
|
|
| T |
31679924 |
tggttggtaggaagagtgataaagagaaactaactaatatgttgctatc |
31679876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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