View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8986_low_69 (Length: 369)
Name: NF8986_low_69
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8986_low_69 |
 | |
|
| [»] chr6 (29 HSPs) |
| |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| |
|
| [»] scaffold0477 (1 HSPs) |
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| [»] chr3 (1 HSPs) |
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|
| [»] scaffold0475 (1 HSPs) |
| | |
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| [»] scaffold0199 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 340; Significance: 0; HSPs: 29)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 18 - 369
Target Start/End: Complemental strand, 4580162 - 4579811
Alignment:
| Q |
18 |
agaaggatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgac |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4580162 |
agaaggatgtaatgaatgctctctccactgtgttcccttgtattcatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgac |
4580063 |
T |
|
| Q |
118 |
atctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4580062 |
atctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttatgtgaattttgggagcttg |
4579963 |
T |
|
| Q |
218 |
acagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
317 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579962 |
acagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
4579863 |
T |
|
| Q |
318 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579862 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
4579811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 369
Target Start/End: Complemental strand, 4557855 - 4557504
Alignment:
| Q |
18 |
agaaggatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgac |
117 |
Q |
| |
|
|||||||||||||||||| ||||||| | |||||| ||||| || ||| |||||||||||||| |||||| |||||||||| | || || ||| | |
|
|
| T |
4557855 |
agaaggatgtaatgaatgttctctcctcgacgttcccaaatatttgtggtatcggccctttatcttcacttttaagtcaaagtccacataatcacttggc |
4557756 |
T |
|
| Q |
118 |
atctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttg |
217 |
Q |
| |
|
| |||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||||| || |
|
|
| T |
4557755 |
aagtttaagtaccaatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattttgggagcatg |
4557656 |
T |
|
| Q |
218 |
acagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
317 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4557655 |
acagttatgacggcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtg |
4557556 |
T |
|
| Q |
318 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4557555 |
gctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcct |
4557504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 367
Target Start/End: Complemental strand, 4598901 - 4598552
Alignment:
| Q |
18 |
agaaggatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgac |
117 |
Q |
| |
|
|||| |||||| |||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| |||||| | |
|
|
| T |
4598901 |
agaatgatgtattgaatgttctctccagtatgttcccttgtatttatgccattggccctttatcttcgtttttaaatcaaagtcaacaaaagcatttggc |
4598802 |
T |
|
| Q |
118 |
atctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttg |
217 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||||| ||||||||||||||| | |
|
|
| T |
4598801 |
atctttaggtaccaatctttggaaagaagataccaagtgtcttgactggcttgaatccaatgaaccaaggtctgttgtttatgtgaattttgggagcata |
4598702 |
T |
|
| Q |
218 |
acagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
317 |
Q |
| |
|
|| || ||||||| |||||| ||||||| ||||| |||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||| || | |
|
|
| T |
4598701 |
acggtgatgactgcagaaaagttgttagactttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtg |
4598602 |
T |
|
| Q |
318 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
367 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4598601 |
gctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
4598552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 60 - 369
Target Start/End: Complemental strand, 4571660 - 4571351
Alignment:
| Q |
60 |
tttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtct |
159 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||| | || || ||| || |||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
4571660 |
tttatgctattggccctttatcttcacttttaagtcaaagtccacagaatcacttggcaagtttaagtaccaatctttggaaagaagataacaagtgtct |
4571561 |
T |
|
| Q |
160 |
ttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggt |
259 |
Q |
| |
|
| ||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4571560 |
tgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcaggacagttatgacttcagaaaaactgttagagtttgcatggggt |
4571461 |
T |
|
| Q |
260 |
ttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcag |
359 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4571460 |
ttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcag |
4571361 |
T |
|
| Q |
360 |
atagaggcct |
369 |
Q |
| |
|
|||||||||| |
|
|
| T |
4571360 |
atagaggcct |
4571351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 369
Target Start/End: Original strand, 4613122 - 4613471
Alignment:
| Q |
20 |
aaggatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacat |
119 |
Q |
| |
|
|||||||||||||||| ||||||| | ||||||| ||||| ||||||||| ||||||||||| |||||| |||||||||| |||| || ||| || |
|
|
| T |
4613122 |
aaggatgtaatgaatgttctctcctcgacgttccctaatatttgtgctattggtcctttatcttcacttttaagtcaaagtccacaaaatcacttggcaa |
4613221 |
T |
|
| Q |
120 |
ctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgac |
219 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| |
|
|
| T |
4613222 |
gtttaagtaccaatctttggaaagaagataccaagtgtcttgattggcttgaatccaaggaaccgaagtccgttgtttatgtgaattttgggagcatgac |
4613321 |
T |
|
| Q |
220 |
agttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggc |
319 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
4613322 |
cgttatgactgcagaaaaactattagagtttgcttggggtttggcgaatagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggc |
4613421 |
T |
|
| Q |
320 |
tcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4613422 |
tcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
4613471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 369
Target Start/End: Complemental strand, 4586366 - 4586015
Alignment:
| Q |
18 |
agaaggatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgac |
117 |
Q |
| |
|
||||||||||||| |||| |||||||||| |||||||| ||||||||| |||||||||||||| || |||||||||||||||||| ||||||| || | |
|
|
| T |
4586366 |
agaaggatgtaataaatgttctctccactaagttcccttctatttatgccattggccctttatcatcatttttaaatcaaagtccacaaaaccacttagc |
4586267 |
T |
|
| Q |
118 |
atctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttg |
217 |
Q |
| |
|
||||||||| || ||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
4586266 |
atctttaagtacaaatctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcaca |
4586167 |
T |
|
| Q |
218 |
acagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
317 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||| |||||||| || ||||||||||||| ||||| ||||||||||| || ||||||||||| || | |
|
|
| T |
4586166 |
acagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatggatcattagacctgatcttgtcattggtg |
4586067 |
T |
|
| Q |
318 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
| || ||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
4586066 |
gttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcct |
4586015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 80 - 369
Target Start/End: Complemental strand, 4470471 - 4470182
Alignment:
| Q |
80 |
tcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaagg |
179 |
Q |
| |
|
||||| |||||||||||||||||| |||| ||| | ||||||||| |||| |||||||||||||||| || |||||| | ||||||||||| || | |
|
|
| T |
4470471 |
tcttcttttttaaatcaaagtccacaaaatcatctagcatctttaaatttcaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaag |
4470372 |
T |
|
| Q |
180 |
aacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaacc |
279 |
Q |
| |
|
|||| | |||||||| || || ||||| || ||| | ||||||||| || ||| ||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4470371 |
aaccaggatctgttgtctatgtaaatttcggcagcgtcacagttatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaacc |
4470272 |
T |
|
| Q |
280 |
ctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||| ||| |||| |||| |||||||||||||||||| |
|
|
| T |
4470271 |
ctttttgtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcct |
4470182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 87 - 369
Target Start/End: Complemental strand, 4626612 - 4626330
Alignment:
| Q |
87 |
ttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctag |
186 |
Q |
| |
|
|||| |||| ||||||| ||||||| |||| ||||||| | ||||| ||||||||||||| ||||| |||||| | |||||||||| ||||||||| | |
|
|
| T |
4626612 |
ttttgaatcgaagtccacaaaaccagttgatatctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaa |
4626513 |
T |
|
| Q |
187 |
gtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttg |
286 |
Q |
| |
|
|||||||||||| ||||| ||||| ||| | | |||||||||| | | ||||||||||||||||| |||||||| || |||||||| ||||||||||| |
|
|
| T |
4626512 |
gtctgttgtttatgtgaactttggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttg |
4626413 |
T |
|
| Q |
287 |
tggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||||||||||| |||||||| || || |||||| | ||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
4626412 |
tggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcct |
4626330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 369
Target Start/End: Original strand, 4299228 - 4299574
Alignment:
| Q |
23 |
gatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctt |
122 |
Q |
| |
|
||||||||||||||||||| || ||||||||| | | ||| ||||||| |||||| |||| || |||||||||| |||| | || || ||| ||||| |
|
|
| T |
4299228 |
gatgtaatgaatgctctctattctatgttcccttctttatatactattggacctttaccttcattattaaatcaaactccacataatcacttggaatctt |
4299327 |
T |
|
| Q |
123 |
taagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagt |
222 |
Q |
| |
|
|| | ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| || | || |||||||| ||||||||||| ||| | ||||| |
|
|
| T |
4299328 |
taggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaattttggcagcgttacagt |
4299427 |
T |
|
| Q |
223 |
tatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctca |
322 |
Q |
| |
|
||||||| ||| ||||||||||| |||| |||||||| || ||| ||| | |||| |||||||||||||||||||| || |||||||| ||||||| |
|
|
| T |
4299428 |
tatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattggcggcttg |
4299527 |
T |
|
| Q |
323 |
gctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
| |||||||||| ||||||| ||||||||||||| |||||||||| |
|
|
| T |
4299528 |
tttattttgtcatctgagtttgagaatgaaatttcaaatagaggcct |
4299574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 80 - 369
Target Start/End: Complemental strand, 4461791 - 4461502
Alignment:
| Q |
80 |
tcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaagg |
179 |
Q |
| |
|
||||| ||| |||||||||||||| |||| || || ||||||||| ||||| |||||||||||||||| || |||||| | ||||||||||| || | |
|
|
| T |
4461791 |
tcttcttttataaatcaaagtccacaaaatcacctggcatctttaaattccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaag |
4461692 |
T |
|
| Q |
180 |
aacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaacc |
279 |
Q |
| |
|
|||| | |||||||| || || |||||||| ||| | |||||||||||| || |||||||||||||||| |||||||| || |||||||| |||| |
|
|
| T |
4461691 |
aaccaggatctgttgtctatgtaaattttggcagcatcacagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaacc |
4461592 |
T |
|
| Q |
280 |
ctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4461591 |
ctttttatggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcct |
4461502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 69 - 369
Target Start/End: Complemental strand, 4622819 - 4622521
Alignment:
| Q |
69 |
ttggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggct |
168 |
Q |
| |
|
|||| |||||| |||| || |||||||||| |||| | || || ||| ||||| || | ||||| ||||||||||||||| |||||||||| | ||||| |
|
|
| T |
4622819 |
ttggacctttaccttcattattaaatcaaactccacataatcacttggcatctctaggttccaatctttggaaagaagatatcaagtgtcttgagtggct |
4622720 |
T |
|
| Q |
169 |
tgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaat |
268 |
Q |
| |
|
|||||||||||||||| | || ||||||||||||||||||| ||| | ||||| |||||| ||| |||| ||||||||||| |||||||| || || |
|
|
| T |
4622719 |
tgaatccaaggaacct--gactcttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgat |
4622622 |
T |
|
| Q |
269 |
agcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcc |
368 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| || |||||||| |||||||| | |||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
4622621 |
agcaagaaaccctttttgtggatcattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcc |
4622522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 366
Target Start/End: Original strand, 4266573 - 4266916
Alignment:
| Q |
23 |
gatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctt |
122 |
Q |
| |
|
||||| ||||||||||||| | || ||||||||| ||| || | |||||||| || |||| |||||||||||||||||| |||| || ||| |||||| |
|
|
| T |
4266573 |
gatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaatcacttggcatctt |
4266672 |
T |
|
| Q |
123 |
taagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagt |
222 |
Q |
| |
|
||| ||||| |||||||||||||||| || |||||| | ||||||||||| || ||||| || ||||||||||| || |||||||| ||| | ||||| |
|
|
| T |
4266673 |
taaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggtagcatcacagt |
4266772 |
T |
|
| Q |
223 |
tatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctca |
322 |
Q |
| |
|
|||| | ||| || || ||||||||||| |||||||| || || |||||| | || ||||||||||| |||||||| ||||||||||| || |||||| |
|
|
| T |
4266773 |
tatgtcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctca |
4266872 |
T |
|
| Q |
323 |
gctgttttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
| |||||||||||| || ||| | || ||||||||||||||||| |
|
|
| T |
4266873 |
gttgttttgtcatctgatttttttaaagaaatttcagatagagg |
4266916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 81 - 369
Target Start/End: Complemental strand, 3172408 - 3172120
Alignment:
| Q |
81 |
cttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaagga |
180 |
Q |
| |
|
|||||||||||| ||||||||| |||| || ||| |||||||| | ||| |||||||||||||||| || |||||| | ||||||||| | || || |
|
|
| T |
3172408 |
cttcgtttttaagtcaaagtccgcaaaatcacttggcatctttagattctaatctttggaaagaagatactaaatgtcttgaatggcttgaaacaaaaga |
3172309 |
T |
|
| Q |
181 |
acctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccc |
280 |
Q |
| |
|
| | | ||||||||||| || |||||||| ||| | | ||||||| || ||| ||| | ||||||||||| ||||||||||| || |||||| ||||| |
|
|
| T |
3172308 |
atcaaaatctgttgtttatgtaaattttggcagcatcatagttatgtctcaagagaaattattagagtttgcttggggtttagccaacagcaagaaaccc |
3172209 |
T |
|
| Q |
281 |
tttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3172208 |
tttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
3172120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 369
Target Start/End: Original strand, 4259561 - 4259907
Alignment:
| Q |
23 |
gatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctt |
122 |
Q |
| |
|
||||||||||||| |||| || ||||||||| | | ||||||||||| |||||| |||| || |||||||||| |||| | || || || |||| | |
|
|
| T |
4259561 |
gatgtaatgaatgtgctctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccacataatcacctggcatcgt |
4259660 |
T |
|
| Q |
123 |
taagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagt |
222 |
Q |
| |
|
|| | ||||| ||||||||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||||||||||||||| ||| | ||||| |
|
|
| T |
4259661 |
taggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatttaaggaacctgagtctgttgtttacgtgaattttggcagcattacagt |
4259760 |
T |
|
| Q |
223 |
tatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctca |
322 |
Q |
| |
|
||||||| ||| || | ||||||||||| ||||| || || ||||||||| ||||||||||||||||||||||||| || || | || || ||||| |
|
|
| T |
4259761 |
tatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctgacctcattattggtggctcc |
4259860 |
T |
|
| Q |
323 |
gctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
| |||||||||| ||||||| || ||||||||| ||||||||||| |
|
|
| T |
4259861 |
tttattttgtcatctgagtttgagagtgaaatttcggatagaggcct |
4259907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 137 - 367
Target Start/End: Complemental strand, 4592842 - 4592612
Alignment:
| Q |
137 |
tggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaa |
236 |
Q |
| |
|
|||||||||||||| |||||||| | ||||||||||| |||||| | | || |||||||| |||||||| || ||| | |||||||||| || ||| | |
|
|
| T |
4592842 |
tggaaagaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaatttcggcagccttacagttatgaatgaagaga |
4592743 |
T |
|
| Q |
237 |
aactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatc |
336 |
Q |
| |
|
|| ||||||||||||| |||||||| || ||| |||| |||| |||||||||||||||||||| ||||||||||| || ||| || |||||||||||| |
|
|
| T |
4592742 |
aaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatc |
4592643 |
T |
|
| Q |
337 |
ggagtttgtgaatgaaatttcagatagaggc |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4592642 |
ggagtttgtgaatgaaatttcagatagaggc |
4592612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 68 - 369
Target Start/End: Original strand, 4514573 - 4514874
Alignment:
| Q |
68 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
167 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||| |||| || ||| ||||||| | ||||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4514573 |
attggcccatttgcttcgtttttgaatcaaagtccacaaaatcacttggaatctttaggttccaatctttggaaagaagatactaaatgtcttgaatggc |
4514672 |
T |
|
| Q |
168 |
ttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaa |
267 |
Q |
| |
|
||||||| || ||| | | ||||||||||| || |||||||| ||| | || ||||| || || ||| ||||||||||||| |||||||| || || |
|
|
| T |
4514673 |
ttgaatcaaaagaatcaggatctgttgtttatgttaattttggtagcatcacgattatgtctccggagaaattgttagagtttgcttggggtttggccaa |
4514772 |
T |
|
| Q |
268 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
367 |
Q |
| |
|
||||||| || ||||||| |||||||||||||| ||||||||||| || ||||||| |||||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
4514773 |
tagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggc |
4514872 |
T |
|
| Q |
368 |
ct |
369 |
Q |
| |
|
|| |
|
|
| T |
4514873 |
ct |
4514874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 4564439 - 4564092
Alignment:
| Q |
23 |
gatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccat---ttgacat |
119 |
Q |
| |
|
|||||||| |||||||||||| || |||| |||| | |||| | |||||||||||| |||| || ||||| |||| |||| ||| ||| ||| | |
|
|
| T |
4564439 |
gatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaattggatt |
4564340 |
T |
|
| Q |
120 |
ctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgac |
219 |
Q |
| |
|
||||| | |||| |||||||||||||||| ||||||||| | ||||||||||||||||| || | || |||||||| ||||||||||| ||| | || |
|
|
| T |
4564339 |
ctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggaagcattac |
4564240 |
T |
|
| Q |
220 |
agttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggc |
319 |
Q |
| |
|
||||||||| | || ||||||| || ||||| ||||| || || ||| |||| ||||||||||||||||||||||||| || |||||||| || ||| |
|
|
| T |
4564239 |
agttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattggtggc |
4564140 |
T |
|
| Q |
320 |
tcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
367 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4564139 |
tcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggc |
4564092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 68 - 343
Target Start/End: Original strand, 4256076 - 4256351
Alignment:
| Q |
68 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
167 |
Q |
| |
|
||||| |||||| |||| || |||||||||| |||| | | || ||| |||| ||| | ||||| |||||||||||||||||||||||||| | |||| |
|
|
| T |
4256076 |
attggacctttaccttcattattaaatcaaactccacatagtcacttggcatcgttaggttccaatctttggaaagaagataccaagtgtcttgaatggc |
4256175 |
T |
|
| Q |
168 |
ttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaa |
267 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||||| ||| |||||||||||||||| ||||| || || || |
|
|
| T |
4256176 |
ttgaatccaaggaacctgagtctgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaa |
4256275 |
T |
|
| Q |
268 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagttt |
343 |
Q |
| |
|
||||||| |||| |||||||| ||||||||||| || || ||||| || ||||| | |||||||||| |||||| |
|
|
| T |
4256276 |
tagcaagaaaccatttttgtgtatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt |
4256351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 68 - 366
Target Start/End: Original strand, 4489807 - 4490105
Alignment:
| Q |
68 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
167 |
Q |
| |
|
|||||||| || ||||| |||||| |||||| ||||||||| || |||| ||||||| | | ||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4489807 |
attggcccattttcttcttttttagatcaaattccagaaaatcacttgaaatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
4489906 |
T |
|
| Q |
168 |
ttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaa |
267 |
Q |
| |
|
||||||| || ||||| | ||||||||||| || |||||||| ||| | || |||||| || ||| || || |||||||||||||||||||| || || |
|
|
| T |
4489907 |
ttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctattagagtttgcatggggtttggccaa |
4490006 |
T |
|
| Q |
268 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||| || || |||||| || |||||||| || ||| |||| ||||||||||||||||| |
|
|
| T |
4490007 |
cagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagagg |
4490105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 366
Target Start/End: Original strand, 4503849 - 4504147
Alignment:
| Q |
68 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
167 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| | |||||||||||| | | ||| |||||||||||||||| || |||||| |||||| |
|
|
| T |
4503849 |
attggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgattggc |
4503948 |
T |
|
| Q |
168 |
ttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaa |
267 |
Q |
| |
|
|||||| || ||||| | ||||||||||| || |||||||| ||| | ||||||||| || ||| ||| ||||||||||||| |||||||| || || |
|
|
| T |
4503949 |
ttgaattaaaagaaccaggatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgcttggggtttggccaa |
4504048 |
T |
|
| Q |
268 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
||||||| |||| ||||||||||| |||||||| |||||||| || || ||||||| || |||||||| || ||||||||||||| ||| ||||||| |
|
|
| T |
4504049 |
tagcaagaaaccttttttgtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagagg |
4504147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 4458320 - 4457975
Alignment:
| Q |
23 |
gatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctt |
122 |
Q |
| |
|
||||| |||||| |||||| | || ||||||||| ||| || | |||||||| || |||| ||| |||||||||||||| |||| || ||| |||||| |
|
|
| T |
4458320 |
gatgttatgaatactctctactctatgttcccttctatatacaccattggcccatttgcttcttttataaatcaaagtccacaaaatcacttggcatctt |
4458221 |
T |
|
| Q |
123 |
taagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagt |
222 |
Q |
| |
|
||| ||||| ||||||||||| |||| || |||||| | ||||||||||| || ||||| | ||||||| |||| || |||||||| ||| | ||||| |
|
|
| T |
4458220 |
taaattccaatctttggaaagaatatactaaatgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgtaaattttggaagcatcacagt |
4458121 |
T |
|
| Q |
223 |
tatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaag-caaccctttttgtggatcattaggcccgatcttgtcatcggcggctc |
321 |
Q |
| |
|
|||| || ||| || || ||||| ||||| |||| ||| || || |||||| |||| ||||||||||| | |||||| ||||||||||| || ||||| |
|
|
| T |
4458120 |
tatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatcttgtcattggtggctc |
4458021 |
T |
|
| Q |
322 |
agctgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
367 |
Q |
| |
|
| ||||||||||||||| ||||||||||||| ||| ||||||||| |
|
|
| T |
4458020 |
ggttgttttgtcatcggattttgtgaatgaaacttctgatagaggc |
4457975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 68 - 366
Target Start/End: Complemental strand, 4574988 - 4574690
Alignment:
| Q |
68 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
167 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| | |||||||||||| | | ||| |||||||||||||||| || |||||| | ||| |
|
|
| T |
4574988 |
attggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatgga |
4574889 |
T |
|
| Q |
168 |
ttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaa |
267 |
Q |
| |
|
||||||| || ||||| || ||||||||||| || |||||||| ||| | || |||||| || ||| || || |||||||||| |||||||| || || |
|
|
| T |
4574888 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
4574789 |
T |
|
| Q |
268 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||| || ||||| | ||||| ||||| || ||| |||| ||||||||||||||||| |
|
|
| T |
4574788 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagagg |
4574690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 367
Target Start/End: Complemental strand, 4517051 - 4516702
Alignment:
| Q |
18 |
agaaggatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgac |
117 |
Q |
| |
|
|||| |||||||| |||||||| || | | | |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||| |||| | ||| | |
|
|
| T |
4517051 |
agaatgatgtaataaatgctctatctattaagatcccttctatttatgccattggccctttaacttcatttttgaatcaaagtccgcaaaataacttggc |
4516952 |
T |
|
| Q |
118 |
atctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttg |
217 |
Q |
| |
|
||| || | | ||| ||||||||||||||| || |||||| | ||||||||||| ||||||| | ||||| ||||| ||||||||||| ||| | |
|
|
| T |
4516951 |
ttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaaggaacaaggttctgtagtttatgtgaattttggaagcatc |
4516852 |
T |
|
| Q |
218 |
acagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
317 |
Q |
| |
|
|| || |||||| ||| ||||||||||||| || |||||||| || || |||||| |||| ||||||||||| |||||||| || |||||||| || | |
|
|
| T |
4516851 |
acggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggattattaggcctgaccttgtcattggtg |
4516752 |
T |
|
| Q |
318 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
367 |
Q |
| |
|
|||| | | |||||||||| || ||||||||||||| ||| ||||||||| |
|
|
| T |
4516751 |
gctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggc |
4516702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 66 - 369
Target Start/End: Complemental strand, 4506539 - 4506236
Alignment:
| Q |
66 |
ctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattg |
165 |
Q |
| |
|
|||||||||||||| |||| ||| |||||||||||||| |||| || || || ||||| | ||| |||||||||| ||||| || ||||| | || |
|
|
| T |
4506539 |
ctattggccctttaacttcatttgtaaatcaaagtccacaaaatcagtttgcaactttagattcaaatctttggaaagaggatactaaatgtctcgaatg |
4506440 |
T |
|
| Q |
166 |
gcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagca |
265 |
Q |
| |
|
||| ||||| || ||||| ||||||||||| ||||||||||| ||| | ||| ||||| || || ||| | ||||||||||| |||||||| || |
|
|
| T |
4506439 |
gctggaatcaaaagaaccggcttctgttgtttatgtgaattttggaagcatcacaattatgtctccggagaaatttttagagtttgcttggggtttggcc |
4506340 |
T |
|
| Q |
266 |
aatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagag |
365 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||| || || ||||||| |||||||| || ||||||| |||||||||||||||||| |
|
|
| T |
4506339 |
aatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaa |
4506240 |
T |
|
| Q |
366 |
gcct |
369 |
Q |
| |
|
|||| |
|
|
| T |
4506239 |
gcct |
4506236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 369
Target Start/End: Complemental strand, 4481306 - 4481072
Alignment:
| Q |
135 |
tttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtaga |
234 |
Q |
| |
|
|||||||||||||||| || |||||| | ||||||||||| || ||||| | ||||||||||| || |||||||| ||| | ||| ||||| || ||| |
|
|
| T |
4481306 |
tttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcacaattatgtctcaaga |
4481207 |
T |
|
| Q |
235 |
aaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtca |
334 |
Q |
| |
|
||||| ||||||||||| |||||||| || |||||||| || |||||||||||| |||||| | |||||||||| || ||||||| || |||||| |
|
|
| T |
4481206 |
gaaactcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttgtcattggtggctcagtggtgttgtca |
4481107 |
T |
|
| Q |
335 |
tcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|| |||| | |||| ||||||||| |||||||||| |
|
|
| T |
4481106 |
tctgagtatttgaaagaaatttcaaatagaggcct |
4481072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 366
Target Start/End: Complemental strand, 4561184 - 4560888
Alignment:
| Q |
68 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
167 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| || |||||||||||| | ||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4561184 |
attggtccattagcttcttttgtaaatcaaagtccacaaaatcacttgacatctttagactgtaatctttggaaagaagatactaaatgtcttgaatggc |
4561085 |
T |
|
| Q |
168 |
ttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaa |
267 |
Q |
| |
|
||||||| || ||||| | ||||||||||| || |||||||| ||| | || |||| | || ||| || | ||||||||||| |||||||| || || |
|
|
| T |
4561084 |
ttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttaagtctcaagagaagcc-ttagagtttgcttggggtttggccaa |
4560986 |
T |
|
| Q |
268 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||| ||||||||||| || ||||| | ||||| ||||| || ||| |||| ||||||||||||||||| |
|
|
| T |
4560985 |
cagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctga-tttttgaaagaaatttcagatagagg |
4560888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 369
Target Start/End: Complemental strand, 4602400 - 4602168
Alignment:
| Q |
137 |
tggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaa |
236 |
Q |
| |
|
|||||||||||||| |||||||| | ||||||||||||||||| || | || |||||||| ||||||||||| ||| | ||||||||||| | |
|
|
| T |
4602400 |
tggaaagaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggcagcattacagttatgacaccccatc |
4602301 |
T |
|
| Q |
237 |
aactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatc |
336 |
Q |
| |
|
|| | ||||| || || |||||||| || ||| || | |||| |||||||||||||||||||| ||||||||||| || ||||||| |||||||||| |
|
|
| T |
4602300 |
aattattagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatc |
4602201 |
T |
|
| Q |
337 |
ggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |
|
|
| T |
4602200 |
tgagtttacaaatgaaatttcagatagaggcct |
4602168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 369
Target Start/End: Complemental strand, 4617635 - 4617401
Alignment:
| Q |
135 |
tttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtaga |
234 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||| || | || |||||||| |||||||| || ||| | ||||||||||| || |
|
|
| T |
4617635 |
tttggaaagaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaatttcggcagcattacagttatgacacccga |
4617536 |
T |
|
| Q |
235 |
aaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtca |
334 |
Q |
| |
|
|| | | || ||||| |||||||| || ||| ||||| || | |||||||||||||| ||||| ||||||||||| || ||||||| |||| ||| |
|
|
| T |
4617535 |
gcaattactggaatttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctca |
4617436 |
T |
|
| Q |
335 |
tcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|| |||||| ||||||||| ||||||||||||| |
|
|
| T |
4617435 |
tctgagtttacaaatgaaattgcagatagaggcct |
4617401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 368
Target Start/End: Complemental strand, 4568741 - 4568436
Alignment:
| Q |
51 |
tcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagatac |
150 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||| ||||||| ||| |||| || ||| | |||||| | ||||| ||||||||||||||| |
|
|
| T |
4568741 |
tcccttctatttacgccattggccctttatcttcgtttttgaatcaaaatccccaaaagcacttggcttctttaggttccaatctttggaaagaagatat |
4568642 |
T |
|
| Q |
151 |
caagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagttt |
250 |
Q |
| |
|
|| |||||| ||||| ||||||| | ||||| ||||| ||||||||||| ||| | ||||||||| ||| | ||||||||| |
|
|
| T |
4568641 |
gaaatgtctt---------gaatctaaggaacaaggttctgtagtttatgtgaattttggaagcactatggttatgactccagagca---gttagagttc |
4568554 |
T |
|
| Q |
251 |
gcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatg |
350 |
Q |
| |
|
| || ||||| || || |||||| |||| |||||||||||||||||||| | |||||||| || ||||||| | |||||||||| ||||||||||||| |
|
|
| T |
4568553 |
tcttgaggttttgccaacagcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatg |
4568454 |
T |
|
| Q |
351 |
aaatttcagatagaggcc |
368 |
Q |
| |
|
|| ||| |||||||||| |
|
|
| T |
4568453 |
gaacttcggatagaggcc |
4568436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 78 - 369
Target Start/End: Original strand, 16685729 - 16686020
Alignment:
| Q |
78 |
tatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaa |
177 |
Q |
| |
|
||||||| |||||| |||||||||| | || || ||| || |||||| | |||| |||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
16685729 |
tatcttcacttttaagtcaaagtccacataatcagttgtcaagtttaagtatcaatctttggaaataagataccaagtgtcttgattggcttgaatccaa |
16685828 |
T |
|
| Q |
178 |
ggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaa |
277 |
Q |
| |
|
|||||| || || |||||||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||| | |||||||||||| |
|
|
| T |
16685829 |
ggaaccgagttccgttgtttatgtgaattttgggagcatgacagttatgactgcagaaaaactattagagtttgcttggggtttgaccaatagcaagcaa |
16685928 |
T |
|
| Q |
278 |
ccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
| ||| |||||||||||| | ||||||||||| |||| || | ||||||||||| |||||| ||||||||| ||||||||| |||| |
|
|
| T |
16685929 |
cattttcaatggatcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcct |
16686020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 218 - 369
Target Start/End: Original strand, 20863445 - 20863596
Alignment:
| Q |
218 |
acagttatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcg |
317 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||||||||||||||| || || |||||| ||||||||||||||||||||||||| ||||||||||| || | |
|
|
| T |
20863445 |
acagtcatgtctgtagaaaaattgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtg |
20863544 |
T |
|
| Q |
318 |
gctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||| | |||| ||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
20863545 |
gctcggtgattttttcatctgcgtttgtgaatgaaatttcagatagaggcct |
20863596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 369
Target Start/End: Complemental strand, 1674839 - 1674605
Alignment:
| Q |
135 |
tttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtaga |
234 |
Q |
| |
|
|||||||||||||||| |||||||| | |||||||||||||| ||||| | || |||||||| |||||||| || ||| | | ||||||||| ||| |
|
|
| T |
1674839 |
tttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcggtagcattattgttatgactccaga |
1674740 |
T |
|
| Q |
235 |
aaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtca |
334 |
Q |
| |
|
|||| || |||||||| |||||||| || || ||||| |||| ||||||||||||| |||||| ||||||||||| || ||||||| ||||||||| |
|
|
| T |
1674739 |
tcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtggctcagtggttttgtca |
1674640 |
T |
|
| Q |
335 |
tcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|| |||||| |||| |||||||||||||||||||| |
|
|
| T |
1674639 |
tctgagtttatgaaagaaatttcagatagaggcct |
1674605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 129 - 369
Target Start/End: Original strand, 3232 - 3472
Alignment:
| Q |
129 |
ccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgac |
228 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||| |||||||||||| |||||||| || ||| | ||||||||||| |
|
|
| T |
3232 |
ccaatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgagtctgttgtttatgtgaatttcggcagcattacagttatgac |
3331 |
T |
|
| Q |
229 |
tgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgtt |
328 |
Q |
| |
|
| | | |||||||||| ||||| |||||||| || |||||||| |||| |||||||||||||||||||| ||||||||||| |||||||| | || |
|
|
| T |
3332 |
tccaaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattggcggctcgtttatt |
3431 |
T |
|
| Q |
329 |
ttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
3432 |
ttgtcatcagaatttgagaatgaaatttcagatagaggcct |
3472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 129 - 369
Target Start/End: Original strand, 4199 - 4439
Alignment:
| Q |
129 |
ccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgac |
228 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||||| ||||||||||| ||| | ||||||||||| |
|
|
| T |
4199 |
ccaatctttggaaagaagataccaagtgtcttgagtggcttgcatccaaggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgac |
4298 |
T |
|
| Q |
229 |
tgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgtt |
328 |
Q |
| |
|
| ||| |||||||||||||||| |||| ||| | ||| | ||| || |||||||||||||||||||||| || |||||||| |||||||| | || |
|
|
| T |
4299 |
tccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttatt |
4398 |
T |
|
| Q |
329 |
ttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
4399 |
ttgtcatctgagtttgagaatgaaatttcagatagaggcct |
4439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 23 - 366
Target Start/End: Complemental strand, 24103724 - 24103381
Alignment:
| Q |
23 |
gatgtaatgaatgctctctccactgtgttcccttgtatttatgctattggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctt |
122 |
Q |
| |
|
||||| ||||||||||||| | || ||||||||| ||| || | |||||||| || |||| |||||||||||||||||| |||| || ||| |||||| |
|
|
| T |
24103724 |
gatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaatcacttggcatctt |
24103625 |
T |
|
| Q |
123 |
taagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagt |
222 |
Q |
| |
|
||| ||||| |||||||||||||||| || |||||| | ||||||||||| || ||||| || || |||||||| || |||||||| ||| | ||||| |
|
|
| T |
24103624 |
taaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaattttggtagcatcacagt |
24103525 |
T |
|
| Q |
223 |
tatgactgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctca |
322 |
Q |
| |
|
|||| | ||| || || ||||||||||| |||||||| || ||||||||| | || ||||||||||| |||||||| ||||||||||| || |||||| |
|
|
| T |
24103524 |
tatgtcacgagagaagctcttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctca |
24103425 |
T |
|
| Q |
323 |
gctgttttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
| |||||||||||| || ||| | || ||| ||||||||||||| |
|
|
| T |
24103424 |
gttgttttgtcatctgatttttttaaagaagtttcagatagagg |
24103381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 369
Target Start/End: Original strand, 27999753 - 27999852
Alignment:
| Q |
270 |
gcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
||||| |||| ||||||||||||| |||||| |||||||||| || ||||||| ||||||||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
27999753 |
gcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcct |
27999852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 129 - 366
Target Start/End: Complemental strand, 3087039 - 3086802
Alignment:
| Q |
129 |
ccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgac |
228 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||||||||| |||| || | |||||||||||| |||| |||||| ||| | ||||||||||| |
|
|
| T |
3087039 |
ccaatctttggaaagaagataccaagtgtcttgaatggcttgaatcaaagggacttgagtctgttgtttatgtgagttttggcagcattacagttatgac |
3086940 |
T |
|
| Q |
229 |
tgtagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgtt |
328 |
Q |
| |
|
| ||| |||| ||||||||||| |||||||| || ||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||| | || |
|
|
| T |
3086939 |
tcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcctttatt |
3086840 |
T |
|
| Q |
329 |
ttgtcatcggagtttgtgaatgaaatttcagatagagg |
366 |
Q |
| |
|
||||||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
3086839 |
atgtcatctgagtttgagaaagaaatttcagatagagg |
3086802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 369
Target Start/End: Complemental strand, 1281727 - 1281493
Alignment:
| Q |
135 |
tttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattttgggagcttgacagttatgactgtaga |
234 |
Q |
| |
|
||||||||||||||| | |||||||| | ||||||||||| |||||||| || ||||||||||| |||||||| || ||| | |||||||||||| ||| |
|
|
| T |
1281727 |
tttggaaagaagatatcgagtgtcttcaatggcttgaatcgaaggaaccgagatctgttgtttatgtgaatttcggaagcattacagttatgactccaga |
1281628 |
T |
|
| Q |
235 |
aaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtca |
334 |
Q |
| |
|
|||| || ||||| |||||| | || ||||||||| |||| ||||||||||||| |||||| ||||||||||| |||||||||| |||||||| |
|
|
| T |
1281627 |
gcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtca |
1281528 |
T |
|
| Q |
335 |
tcggagtttgtgaatgaaatttcagatagaggcct |
369 |
Q |
| |
|
|| || |||| |||||||||||||||||||||||| |
|
|
| T |
1281527 |
tctgactttgcgaatgaaatttcagatagaggcct |
1281493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 3162 - 3261
Alignment:
| Q |
269 |
agcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcc |
368 |
Q |
| |
|
|||||| |||||||| |||||||||||||| | || |||||||| ||||| ||| || ||||| || ||||||| |||||||| |||||||||||||| |
|
|
| T |
3162 |
agcaagaaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggcc |
3261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 76 - 4
Alignment:
| Q |
135 |
tttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttacgtgaattt |
207 |
Q |
| |
|
|||||||||||||||| |||||||| | |||||||||||||| ||||| | || |||||||| |||||||| |
|
|
| T |
76 |
tttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaattt |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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