View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8986_low_93 (Length: 320)
Name: NF8986_low_93
Description: NF8986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8986_low_93 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 86 - 307
Target Start/End: Complemental strand, 34933098 - 34932877
Alignment:
| Q |
86 |
gggggttagggtttaaaccttatgaattcgggattttctcttctttgatggaatgattatattagttttgatagagtgtgtttaattaattagtacatat |
185 |
Q |
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| T |
34933098 |
gggggttagggtttaaaccttgtgaattcgggattttctcttctttgatggaatgattatattagttttgatagagtgtgtttaattaattagtacatat |
34932999 |
T |
|
| Q |
186 |
catcatcatcatctaattaccatctaacaattctgttctttcatattatctgcgaagccgactctctcccaaatcttcaacatctatagcgcaaagatga |
285 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
34932998 |
catcatcatcatctaattaccatctaacaattttgttctttcatattatctgcgaagccgactctctcccaaatcttcaacatctatagtgcaaagatga |
34932899 |
T |
|
| Q |
286 |
gatactcagcgggatgtccatc |
307 |
Q |
| |
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|||||||||||||||| ||||| |
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| T |
34932898 |
gatactcagcgggatgcccatc |
34932877 |
T |
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